Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:40:39 (28601): wrapper (7.7.26015): starting
15:40:39 (28601): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 15:40:39] Arguments: --nthreads 8
[2025-10-10 15:40:39] Threads: 8
[2025-10-10 15:40:39] Checking for CVMFS
[2025-10-10 15:40:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 15:40:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 15:40:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 15:40:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 15:40:39] 2.11.2.0 2827 220434 89116 151559 3 56 12353025 20275201 1 130560 1 76853295 99.978 13244161 12141 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 15:40:39] CVMFS is ok
[2025-10-10 15:40:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 15:40:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 15:40:39] Further information can be found at the LHC@home message board.
[2025-10-10 15:40:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 15:40:39] Checking for apptainer binary...
[2025-10-10 15:40:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 15:40:39] Running /usr/bin/apptainer --version
[2025-10-10 15:40:39] apptainer version 1.3.2-1.el7
[2025-10-10 15:40:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 15:40:41] c-115-13.aglt2.org
[2025-10-10 15:40:41] apptainer works
[2025-10-10 15:40:41] Set ATHENA_PROC_NUMBER=8
[2025-10-10 15:40:41] Set ATHENA_CORE_NUMBER=8
[2025-10-10 15:40:41] Starting ATLAS job with PandaID=6837631245
[2025-10-10 15:40:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 17:33:16]  *** The last 200 lines of the pilot log: ***
[2025-10-10 17:33:16] 2025-10-10 21:32:33,299 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 17:33:16] 2025-10-10 21:32:33,301 | INFO     | fitting pss+swap vs Time
[2025-10-10 17:33:16] 2025-10-10 21:32:33,301 | INFO     | sum of square deviations: 412686807.5
[2025-10-10 17:33:16] 2025-10-10 21:32:33,302 | INFO     | sum of deviations: -8786168397.499998
[2025-10-10 17:33:16] 2025-10-10 21:32:33,302 | INFO     | mean x: 1760128612.5
[2025-10-10 17:33:16] 2025-10-10 21:32:33,302 | INFO     | mean y: 2513706.9
[2025-10-10 17:33:16] 2025-10-10 21:32:33,302 | INFO     | -- intersect: 37475934493.88026
[2025-10-10 17:33:16] 2025-10-10 21:32:33,302 | INFO     | intersect: 37475934493.88026
[2025-10-10 17:33:16] 2025-10-10 21:32:33,303 | INFO     | chi2: 2.26389452260862
[2025-10-10 17:33:16] 2025-10-10 21:32:33,303 | INFO     | sum of square deviations: 358927660.0
[2025-10-10 17:33:16] 2025-10-10 21:32:33,303 | INFO     | sum of deviations: -1005434330.0000036
[2025-10-10 17:33:16] 2025-10-10 21:32:33,304 | INFO     | mean x: 1760128460.0
[2025-10-10 17:33:16] 2025-10-10 21:32:33,304 | INFO     | mean y: 2535026.523809524
[2025-10-10 17:33:16] 2025-10-10 21:32:33,304 | INFO     | -- intersect: 4933037119.603061
[2025-10-10 17:33:16] 2025-10-10 21:32:33,304 | INFO     | intersect: 4933037119.603061
[2025-10-10 17:33:16] 2025-10-10 21:32:33,304 | INFO     | chi2: 1.505129216257733
[2025-10-10 17:33:16] 2025-10-10 21:32:33,304 | INFO     | current chi2=1.505129216257733 (change=33.51593012719443 %)
[2025-10-10 17:33:16] 2025-10-10 21:32:33,305 | INFO     | sum of square deviations: 310052325.0
[2025-10-10 17:33:16] 2025-10-10 21:32:33,305 | INFO     | sum of deviations: -590665622.9999996
[2025-10-10 17:33:16] 2025-10-10 21:32:33,305 | INFO     | mean x: 1760128307.5
[2025-10-10 17:33:16] 2025-10-10 21:32:33,305 | INFO     | mean y: 2536321.7
[2025-10-10 17:33:16] 2025-10-10 21:32:33,305 | INFO     | -- intersect: 3355671258.8736606
[2025-10-10 17:33:16] 2025-10-10 21:32:33,305 | INFO     | intersect: 3355671258.8736606
[2025-10-10 17:33:16] 2025-10-10 21:32:33,306 | INFO     | chi2: 1.5067674171111558
[2025-10-10 17:33:16] 2025-10-10 21:32:33,306 | INFO     | current chi2=1.5067674171111558 (change=-0.10884121015841682 %)
[2025-10-10 17:33:16] 2025-10-10 21:32:33,306 | INFO     | right removable region: 99
[2025-10-10 17:33:16] 2025-10-10 21:32:33,306 | INFO     | sum of square deviations: 358927660.0
[2025-10-10 17:33:16] 2025-10-10 21:32:33,307 | INFO     | sum of deviations: -23718799153.0
[2025-10-10 17:33:16] 2025-10-10 21:32:33,307 | INFO     | mean x: 1760128765.0
[2025-10-10 17:33:16] 2025-10-10 21:32:33,307 | INFO     | mean y: 2555103.476190476
[2025-10-10 17:33:16] 2025-10-10 21:32:33,307 | INFO     | -- intersect: 116316078169.52504
[2025-10-10 17:33:16] 2025-10-10 21:32:33,307 | INFO     | intersect: 116316078169.52504
[2025-10-10 17:33:16] 2025-10-10 21:32:33,307 | INFO     | chi2: 0.9156571353882105
[2025-10-10 17:33:16] 2025-10-10 21:32:33,308 | INFO     | current chi2=0.9156571353882105 (change=59.55389589736163 %)
[2025-10-10 17:33:16] 2025-10-10 21:32:33,308 | INFO     | sum of square deviations: 310052325.0
[2025-10-10 17:33:16] 2025-10-10 21:32:33,308 | INFO     | sum of deviations: -21887218460.0
[2025-10-10 17:33:16] 2025-10-10 21:32:33,308 | INFO     | mean x: 1760128917.5
[2025-10-10 17:33:16] 2025-10-10 21:32:33,308 | INFO     | mean y: 2549252.42
[2025-10-10 17:33:16] 2025-10-10 21:32:33,309 | INFO     | -- intersect: 124253596668.64503
[2025-10-10 17:33:16] 2025-10-10 21:32:33,309 | INFO     | intersect: 124253596668.64503
[2025-10-10 17:33:16] 2025-10-10 21:32:33,309 | INFO     | chi2: 0.9050559440091877
[2025-10-10 17:33:16] 2025-10-10 21:32:33,309 | INFO     | current chi2=0.9050559440091877 (change=1.157768663543286 %)
[2025-10-10 17:33:16] 2025-10-10 21:32:33,309 | INFO     | left removable region: 20
[2025-10-10 17:33:16] 2025-10-10 21:32:33,309 | INFO     | sum of square deviations: 152858680.0
[2025-10-10 17:33:16] 2025-10-10 21:32:33,310 | INFO     | sum of deviations: -7756654042.999999
[2025-10-10 17:33:16] 2025-10-10 21:32:33,310 | INFO     | mean x: 1760128887.0
[2025-10-10 17:33:16] 2025-10-10 21:32:33,310 | INFO     | mean y: 2554050.582278481
[2025-10-10 17:33:16] 2025-10-10 21:32:33,310 | INFO     | -- intersect: 89318455820.43689
[2025-10-10 17:33:16] 2025-10-10 21:32:33,310 | INFO     | intersect: 89318455820.43689
[2025-10-10 17:33:16] 2025-10-10 21:32:33,310 | INFO     | chi2: 0.08616858440984541
[2025-10-10 17:33:16] 2025-10-10 21:32:33,311 | INFO     | -- intersect: 89318455820.43689
[2025-10-10 17:33:16] 2025-10-10 21:32:33,311 | INFO     | current memory leak: -50.74 B/s (using 79 data points, chi2=0.09)
[2025-10-10 17:33:16] 2025-10-10 21:32:33,311 | INFO     | could have reported an average CPU frequency of 2088 MHz (7 samples)
[2025-10-10 17:33:16] 2025-10-10 21:32:33,311 | INFO     | ..............................
[2025-10-10 17:33:16] 2025-10-10 21:32:33,311 | INFO     | . Timing measurements:
[2025-10-10 17:33:16] 2025-10-10 21:32:33,311 | INFO     | . get job = 0 s
[2025-10-10 17:33:16] 2025-10-10 21:32:33,312 | INFO     | . initial setup = 2 s
[2025-10-10 17:33:16] 2025-10-10 21:32:33,312 | INFO     | . payload setup = 7 s
[2025-10-10 17:33:16] 2025-10-10 21:32:33,312 | INFO     | . stage-in = 0 s
[2025-10-10 17:33:16] 2025-10-10 21:32:33,312 | INFO     | . payload execution = 6655 s
[2025-10-10 17:33:16] 2025-10-10 21:32:33,312 | INFO     | . stage-out = 0 s
[2025-10-10 17:33:16] 2025-10-10 21:32:33,312 | INFO     | . log creation = 0 s
[2025-10-10 17:33:16] 2025-10-10 21:32:33,312 | INFO     | ..............................
[2025-10-10 17:33:16] 2025-10-10 21:32:33,400 | INFO     | 
[2025-10-10 17:33:16] 2025-10-10 21:32:33,401 | INFO     | job summary report
[2025-10-10 17:33:16] 2025-10-10 21:32:33,401 | INFO     | --------------------------------------------------
[2025-10-10 17:33:16] 2025-10-10 21:32:33,401 | INFO     | PanDA job id: 6837631245
[2025-10-10 17:33:16] 2025-10-10 21:32:33,401 | INFO     | task id: 46676269
[2025-10-10 17:33:16] 2025-10-10 21:32:33,401 | INFO     | errors: (none)
[2025-10-10 17:33:16] 2025-10-10 21:32:33,401 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 17:33:16] 2025-10-10 21:32:33,401 | INFO     | pilot state: finished 
[2025-10-10 17:33:16] 2025-10-10 21:32:33,401 | INFO     | transexitcode: 0
[2025-10-10 17:33:16] 2025-10-10 21:32:33,402 | INFO     | exeerrorcode: 0
[2025-10-10 17:33:16] 2025-10-10 21:32:33,402 | INFO     | exeerrordiag: 
[2025-10-10 17:33:16] 2025-10-10 21:32:33,402 | INFO     | exitcode: 0
[2025-10-10 17:33:16] 2025-10-10 21:32:33,402 | INFO     | exitmsg: OK
[2025-10-10 17:33:16] 2025-10-10 21:32:33,402 | INFO     | cpuconsumptiontime: 49665 s
[2025-10-10 17:33:16] 2025-10-10 21:32:33,402 | INFO     | nevents: 400
[2025-10-10 17:33:16] 2025-10-10 21:32:33,402 | INFO     | neventsw: 0
[2025-10-10 17:33:16] 2025-10-10 21:32:33,402 | INFO     | pid: 6476
[2025-10-10 17:33:16] 2025-10-10 21:32:33,402 | INFO     | pgrp: 6476
[2025-10-10 17:33:16] 2025-10-10 21:32:33,402 | INFO     | corecount: 8
[2025-10-10 17:33:16] 2025-10-10 21:32:33,403 | INFO     | event service: False
[2025-10-10 17:33:16] 2025-10-10 21:32:33,403 | INFO     | sizes: {0: 2348855, 6: 2349117, 11: 2349145, 6667: 2376229, 6669: 2385227, 6670: 2385283, 6679: 2385605}
[2025-10-10 17:33:16] 2025-10-10 21:32:33,403 | INFO     | --------------------------------------------------
[2025-10-10 17:33:16] 2025-10-10 21:32:33,403 | INFO     | 
[2025-10-10 17:33:16] 2025-10-10 21:32:33,403 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 17:33:16] 2025-10-10 21:32:33,431 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 17:33:16] 2025-10-10 21:32:33,431 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 17:33:16] 2025-10-10 21:32:33,431 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 17:33:16] 2025-10-10 21:32:33,432 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 17:33:16] 2025-10-10 21:32:33,432 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 17:33:16] 2025-10-10 21:32:33,432 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 17:33:16] 2025-10-10 21:32:33,432 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 17:33:16] 2025-10-10 21:32:33,432 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 17:33:16] 2025-10-10 21:32:33,432 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 17:33:16] 2025-10-10 21:32:33,433 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 17:33:16] 2025-10-10 21:32:33,433 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 17:33:16] 2025-10-10 21:32:33,433 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 17:33:16] 2025-10-10 21:32:33,433 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 17:33:16] 2025-10-10 21:32:33,433 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 17:33:16] 2025-10-10 21:32:33,434 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 17:33:16] 2025-10-10 21:32:33,434 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 17:33:16] 2025-10-10 21:32:33,434 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 17:33:16] 2025-10-10 21:32:33,434 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 17:33:16] 2025-10-10 21:32:33,434 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 17:33:16] 2025-10-10 21:32:33,435 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 17:33:16] 2025-10-10 21:32:33,435 | INFO     | job 6837631245 has completed (purged errors)
[2025-10-10 17:33:16] 2025-10-10 21:32:33,435 | INFO     | overall cleanup function is called
[2025-10-10 17:33:16] 2025-10-10 21:32:34,441 | INFO     | --- collectZombieJob: --- 10, [6476]
[2025-10-10 17:33:16] 2025-10-10 21:32:34,442 | INFO     | zombie collector waiting for pid 6476
[2025-10-10 17:33:16] 2025-10-10 21:32:34,442 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 17:33:16] 2025-10-10 21:32:34,442 | INFO     | collected zombie processes
[2025-10-10 17:33:16] 2025-10-10 21:32:34,442 | INFO     | will attempt to kill all subprocesses of pid=6476
[2025-10-10 17:33:16] 2025-10-10 21:32:34,529 | INFO     | process IDs to be killed: [6476] (in reverse order)
[2025-10-10 17:33:16] 2025-10-10 21:32:34,583 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 17:33:16] 2025-10-10 21:32:34,583 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 17:33:16] 2025-10-10 21:32:34,588 | INFO     | did not find any defunct processes belonging to 6476
[2025-10-10 17:33:16] 2025-10-10 21:32:34,591 | INFO     | did not find any defunct processes belonging to 6476
[2025-10-10 17:33:16] 2025-10-10 21:32:34,591 | INFO     | ready for new job
[2025-10-10 17:33:16] 2025-10-10 21:32:34,591 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 17:33:16] 2025-10-10 21:32:34,592 | INFO     | ***************************************
[2025-10-10 17:33:16] 2025-10-10 21:32:34,593 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 17:33:16] 2025-10-10 21:32:34,593 | INFO     | ***************************************
[2025-10-10 17:33:16] 2025-10-10 21:32:34,593 | INFO     | 
[2025-10-10 17:33:16] 2025-10-10 21:32:34,593 | INFO     | architecture information:
[2025-10-10 17:33:16] 2025-10-10 21:32:34,594 | INFO     | executing command: cat /etc/os-release
[2025-10-10 17:33:16] 2025-10-10 21:32:34,612 | INFO     | cat /etc/os-release:
[2025-10-10 17:33:16] NAME="CentOS Linux"
[2025-10-10 17:33:16] VERSION="7 (Core)"
[2025-10-10 17:33:16] ID="centos"
[2025-10-10 17:33:16] ID_LIKE="rhel fedora"
[2025-10-10 17:33:16] VERSION_ID="7"
[2025-10-10 17:33:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 17:33:16] ANSI_COLOR="0;31"
[2025-10-10 17:33:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 17:33:16] HOME_URL="https://www.centos.org/"
[2025-10-10 17:33:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 17:33:16] 
[2025-10-10 17:33:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 17:33:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 17:33:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 17:33:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 17:33:16] 
[2025-10-10 17:33:16] 2025-10-10 21:32:34,612 | INFO     | ***************************************
[2025-10-10 17:33:16] 2025-10-10 21:32:35,115 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 17:33:16] 2025-10-10 21:32:35,135 | INFO     | sufficient remaining disk space (18587058176 B)
[2025-10-10 17:33:16] 2025-10-10 21:32:35,136 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 17:33:16] 2025-10-10 21:32:35,136 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 17:33:16] 2025-10-10 21:32:35,136 | INFO     | update_server=False
[2025-10-10 17:33:16] 2025-10-10 21:32:35,137 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 17:33:16] 2025-10-10 21:32:35,137 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 17:33:16] 2025-10-10 21:32:35,137 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 17:33:16] 2025-10-10 21:32:35,378 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 17:33:16] 2025-10-10 21:32:35,379 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 17:33:16] 2025-10-10 21:32:35,379 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 17:33:16] 2025-10-10 21:32:35,379 | INFO     | will abort loop
[2025-10-10 17:33:16] 2025-10-10 21:32:35,669 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 17:33:16] 2025-10-10 21:32:35,876 | INFO     | all payload control threads have been joined
[2025-10-10 17:33:16] 2025-10-10 21:32:36,084 | INFO     | all data control threads have been joined
[2025-10-10 17:33:16] 2025-10-10 21:32:36,098 | INFO     | all job control threads have been joined
[2025-10-10 17:33:16] 2025-10-10 21:32:36,140 | INFO     | [job] retrieve thread has finished
[2025-10-10 17:33:16] 2025-10-10 21:32:36,143 | INFO     | [job] queue monitor thread has finished
[2025-10-10 17:33:16] 2025-10-10 21:32:36,384 | INFO     | [job] job monitor thread has finished
[2025-10-10 17:33:16] 2025-10-10 21:32:36,808 | INFO     | [job] validate thread has finished
[2025-10-10 17:33:16] 2025-10-10 21:32:36,881 | INFO     | [payload] control thread has finished
[2025-10-10 17:33:16] 2025-10-10 21:32:36,891 | INFO     | [data] copytool_in thread has finished
[2025-10-10 17:33:16] 2025-10-10 21:32:37,090 | INFO     | [data] control thread has finished
[2025-10-10 17:33:16] 2025-10-10 21:32:37,103 | INFO     | [job] control thread has finished
[2025-10-10 17:33:16] 2025-10-10 21:32:37,143 | INFO     | [data] copytool_out thread has finished
[2025-10-10 17:33:16] 2025-10-10 21:32:37,190 | INFO     | [payload] failed_post thread has finished
[2025-10-10 17:33:16] 2025-10-10 21:32:37,289 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 17:33:16] 2025-10-10 21:32:37,417 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 17:33:16] 2025-10-10 21:32:37,600 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 17:33:16] 2025-10-10 21:32:37,697 | INFO     | [payload] validate_post thread has finished
[2025-10-10 17:33:16] 2025-10-10 21:32:39,674 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 17:33:16] 2025-10-10 21:32:45,736 | INFO     | job.realtimelogging is not enabled
[2025-10-10 17:33:16] 2025-10-10 21:32:46,742 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 17:33:16] 2025-10-10 21:33:04,918 | INFO     | PID=32343 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 17:33:16] 2025-10-10 21:33:04,918 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 17:33:16] 2025-10-10 21:33:04,919 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 17:33:16] 2025-10-10 21:33:04,919 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 17:33:16] 2025-10-10 21:33:08,717 | INFO     | [monitor] cgroup control has ended
[2025-10-10 17:33:16] 2025-10-10 21:33:10,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140711452575552)>', '<ExcThread(monitor, started 140710997104384)>']
[2025-10-10 17:33:16] 2025-10-10 21:33:10,942 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 17:33:16] 2025-10-10 21:33:10,942 | INFO     | [monitor] control thread has ended
[2025-10-10 17:33:16] 2025-10-10 21:33:15,773 | INFO     | all workflow threads have been joined
[2025-10-10 17:33:16] 2025-10-10 21:33:15,774 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 17:33:16] 2025-10-10 21:33:15,777 | INFO     | traces error code: 0
[2025-10-10 17:33:16] 2025-10-10 21:33:15,778 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 17:33:16] 2025-10-10 21:33:15,897 [wrapper] ==== pilot stdout END ====
[2025-10-10 17:33:16] 2025-10-10 21:33:15,902 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 17:33:16] 2025-10-10 21:33:15,907 [wrapper] pilotpid: 32343
[2025-10-10 17:33:16] 2025-10-10 21:33:15,912 [wrapper] Pilot exit status: 0
[2025-10-10 17:33:16] 2025-10-10 21:33:15,930 [wrapper] pandaids: 6837631245
[2025-10-10 17:33:16] 2025-10-10 21:33:15,979 [wrapper] cleanup supervisor_pilot 19765 32344
[2025-10-10 17:33:16] 2025-10-10 21:33:15,984 [wrapper] Test setup, not cleaning
[2025-10-10 17:33:16] 2025-10-10 21:33:15,989 [wrapper] apfmon messages muted
[2025-10-10 17:33:16] 2025-10-10 21:33:15,993 [wrapper] ==== wrapper stdout END ====
[2025-10-10 17:33:16] 2025-10-10 21:33:15,997 [wrapper] ==== wrapper stderr END ====
[2025-10-10 17:33:16]  *** Error codes and diagnostics ***
[2025-10-10 17:33:16]     "exeErrorCode": 0,
[2025-10-10 17:33:16]     "exeErrorDiag": "",
[2025-10-10 17:33:16]     "pilotErrorCode": 0,
[2025-10-10 17:33:16]     "pilotErrorDiag": "",
[2025-10-10 17:33:16]  *** Listing of results directory ***
[2025-10-10 17:33:16] total 409380
[2025-10-10 17:33:16] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 10:05 pilot3.tar.gz
[2025-10-10 17:33:16] -rwx------ 1 boincer umatlas     36292 Oct 10 10:13 runpilot2-wrapper.sh
[2025-10-10 17:33:16] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 10:13 queuedata.json
[2025-10-10 17:33:16] -rw-r--r-- 1 boincer umatlas       100 Oct 10 15:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 17:33:16] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 15:40 run_atlas
[2025-10-10 17:33:16] -rw-r--r-- 1 boincer umatlas       105 Oct 10 15:40 job.xml
[2025-10-10 17:33:16] -rw-r--r-- 2 boincer umatlas 222596286 Oct 10 15:40 EVNT.46676267._001612.pool.root.1
[2025-10-10 17:33:16] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 15:40 start_atlas.sh
[2025-10-10 17:33:16] drwxrwx--x 2 boincer umatlas      4096 Oct 10 15:40 shared
[2025-10-10 17:33:16] -rw-r--r-- 2 boincer umatlas    569679 Oct 10 15:40 input.tar.gz
[2025-10-10 17:33:16] -rw-r--r-- 1 boincer umatlas         0 Oct 10 15:40 boinc_lockfile
[2025-10-10 17:33:16] -rw-r--r-- 1 boincer umatlas      2549 Oct 10 15:40 pandaJob.out
[2025-10-10 17:33:16] -rw------- 1 boincer umatlas    975541 Oct 10 15:40 agis_schedconf.cvmfs.json
[2025-10-10 17:33:16] -rw------- 1 boincer umatlas   1560580 Oct 10 15:40 agis_ddmendpoints.agis.ALL.json
[2025-10-10 17:33:16] drwx------ 5 boincer umatlas      4096 Oct 10 15:40 pilot3
[2025-10-10 17:33:16] -rw-r--r-- 1 boincer umatlas      5909 Oct 10 17:31 init_data.xml
[2025-10-10 17:33:16] -rw------- 1 boincer umatlas 190128293 Oct 10 17:31 HITS.46676269._039723.pool.root.1
[2025-10-10 17:33:16] -rw-r--r-- 1 boincer umatlas       529 Oct 10 17:32 boinc_task_state.xml
[2025-10-10 17:33:16] -rw------- 1 boincer umatlas      1051 Oct 10 17:32 memory_monitor_summary.json
[2025-10-10 17:33:16] -rw------- 1 boincer umatlas    344230 Oct 10 17:32 log.46676269._039723.job.log.tgz.1
[2025-10-10 17:33:16] -rw------- 1 boincer umatlas        95 Oct 10 17:32 pilot_heartbeat.json
[2025-10-10 17:33:16] -rw------- 1 boincer umatlas      7850 Oct 10 17:32 heartbeat.json
[2025-10-10 17:33:16] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 17:33 boinc_mmap_file
[2025-10-10 17:33:16] -rw-r--r-- 1 boincer umatlas        27 Oct 10 17:33 wrapper_checkpoint.txt
[2025-10-10 17:33:16] -rw------- 1 boincer umatlas      5004 Oct 10 17:33 pilotlog.txt
[2025-10-10 17:33:16] -rw------- 1 boincer umatlas    946098 Oct 10 17:33 log.46676269._039723.job.log.1
[2025-10-10 17:33:16] -rw------- 1 boincer umatlas       357 Oct 10 17:33 output.list
[2025-10-10 17:33:16] -rw-r--r-- 1 boincer umatlas       620 Oct 10 17:33 runtime_log
[2025-10-10 17:33:16] -rw------- 1 boincer umatlas   1310720 Oct 10 17:33 result.tar.gz
[2025-10-10 17:33:16] -rw------- 1 boincer umatlas       658 Oct 10 17:33 SjZNDm32SR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmH4PMDmE8MEgn.diag
[2025-10-10 17:33:16] -rw-r--r-- 1 boincer umatlas      8703 Oct 10 17:33 runtime_log.err
[2025-10-10 17:33:16] -rw-r--r-- 1 boincer umatlas     20837 Oct 10 17:33 stderr.txt
[2025-10-10 17:33:16] HITS file was successfully produced:
[2025-10-10 17:33:16] -rw------- 1 boincer umatlas 190128293 Oct 10 17:31 shared/HITS.pool.root.1
[2025-10-10 17:33:16]  *** Contents of shared directory: ***
[2025-10-10 17:33:16] total 404912
[2025-10-10 17:33:16] -rw-r--r-- 2 boincer umatlas 222596286 Oct 10 15:40 ATLAS.root_0
[2025-10-10 17:33:16] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 15:40 start_atlas.sh
[2025-10-10 17:33:16] -rw-r--r-- 2 boincer umatlas    569679 Oct 10 15:40 input.tar.gz
[2025-10-10 17:33:16] -rw------- 1 boincer umatlas 190128293 Oct 10 17:31 HITS.pool.root.1
[2025-10-10 17:33:16] -rw------- 1 boincer umatlas   1310720 Oct 10 17:33 result.tar.gz
17:33:17 (28601): run_atlas exited; CPU time 49629.347390
17:33:17 (28601): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN