Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:00:44 (27288): wrapper (7.7.26015): starting
16:00:44 (27288): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 16:00:44] Arguments: --nthreads 12
[2025-10-10 16:00:44] Threads: 12
[2025-10-10 16:00:44] Checking for CVMFS
[2025-10-10 16:00:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 16:00:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 16:00:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 16:00:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 16:00:44] 2.11.2.0 2998 36167 90800 151559 0 57 12406456 20275200 1 130560 0 21352447 99.990 1174522 45007 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 16:00:44] CVMFS is ok
[2025-10-10 16:00:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 16:00:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 16:00:44] Further information can be found at the LHC@home message board.
[2025-10-10 16:00:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 16:00:44] Checking for apptainer binary...
[2025-10-10 16:00:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 16:00:44] Running /usr/bin/apptainer --version
[2025-10-10 16:00:44] apptainer version 1.3.2-1.el7
[2025-10-10 16:00:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 16:00:46] c-205-12.aglt2.org
[2025-10-10 16:00:46] apptainer works
[2025-10-10 16:00:46] Set ATHENA_PROC_NUMBER=12
[2025-10-10 16:00:46] Set ATHENA_CORE_NUMBER=12
[2025-10-10 16:00:46] Starting ATLAS job with PandaID=6837510483
[2025-10-10 16:00:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 17:11:36]  *** The last 200 lines of the pilot log: ***
[2025-10-10 17:11:36]  lfn=log.46676269._035098.job.log.tgz.1
[2025-10-10 17:11:36]  mtime=0
[2025-10-10 17:11:36]  protocol_id=None
[2025-10-10 17:11:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-10 17:11:36]  replicas=None
[2025-10-10 17:11:36]  scope=mc23_13p6TeV
[2025-10-10 17:11:36]  status=None
[2025-10-10 17:11:36]  status_code=0
[2025-10-10 17:11:36]  storage_token=
[2025-10-10 17:11:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6837510483/log.46676269._035098.job.log.tgz.1
[2025-10-10 17:11:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/40/log.46676269._035098.job.log.tgz.1
[2025-10-10 17:11:36]  workdir=None
[2025-10-10 17:11:36] ]
[2025-10-10 17:11:36] 2025-10-10 21:10:57,554 | INFO     | transferring file log.46676269._035098.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6837510483/log.46676269._035098.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-10 17:11:36] 2025-10-10 21:10:57,555 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6837510483/log.46676269._035098.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._035098.job
[2025-10-10 17:11:36] 2025-10-10 21:10:57,579 | INFO     | adding to output.list: log.46676269._035098.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/40/log.46676269._035098.job.log.tg
[2025-10-10 17:11:36] 2025-10-10 21:10:57,579 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 17:11:36] 2025-10-10 21:10:57,580 | INFO     | summary of transferred files:
[2025-10-10 17:11:36] 2025-10-10 21:10:57,580 | INFO     |  -- lfn=log.46676269._035098.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 17:11:36] 2025-10-10 21:10:57,580 | INFO     | stage-out finished correctly
[2025-10-10 17:11:36] 2025-10-10 21:10:57,687 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 17:11:36] 2025-10-10 21:10:59,026 | INFO     | time since job start (4198s) is within the limit (172800.0s)
[2025-10-10 17:11:36] 2025-10-10 21:10:59,303 | INFO     | job 6837510483 has state=finished
[2025-10-10 17:11:36] 2025-10-10 21:10:59,303 | INFO     | preparing for final server update for job 6837510483 in state='finished'
[2025-10-10 17:11:36] 2025-10-10 21:10:59,303 | INFO     | this job has now completed (state=finished)
[2025-10-10 17:11:36] 2025-10-10 21:10:59,304 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 17:11:36] 2025-10-10 21:10:59,304 | INFO     | log transfer has been attempted: DONE
[2025-10-10 17:11:36] 2025-10-10 21:10:59,304 | INFO     | job 6837510483 has finished - writing final server update
[2025-10-10 17:11:36] 2025-10-10 21:10:59,304 | INFO     | total number of processed events: 400 (read)
[2025-10-10 17:11:36] 2025-10-10 21:10:59,305 | INFO     | executing command: lscpu
[2025-10-10 17:11:36] 2025-10-10 21:10:59,332 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 17:11:36] 2025-10-10 21:11:01,031 | INFO     | time since job start (4200s) is within the limit (172800.0s)
[2025-10-10 17:11:36] 2025-10-10 21:11:01,677 | WARNING  | process 5118 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 17:11:36] 2025-10-10 21:11:01,677 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837510483/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 17:11:36] 2025-10-10 21:11:01,768 | INFO     | number of running child processes to parent process 5118: 1
[2025-10-10 17:11:36] 2025-10-10 21:11:01,769 | INFO     | maximum number of monitored processes: 6
[2025-10-10 17:11:36] 2025-10-10 21:11:03,037 | INFO     | time since job start (4202s) is within the limit (172800.0s)
[2025-10-10 17:11:36] 2025-10-10 21:11:04,049 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-10 17:11:36] 2025-10-10 21:11:04,052 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1762.3333333333333
[2025-10-10 17:11:36] 2025-10-10 21:11:04,053 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837510483/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 17:11:36] 2025-10-10 21:11:04,054 | INFO     | extracted standard info from prmon json
[2025-10-10 17:11:36] 2025-10-10 21:11:04,054 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 17:11:36] 2025-10-10 21:11:04,054 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 17:11:36] 2025-10-10 21:11:04,054 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 17:11:36] 2025-10-10 21:11:04,054 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 17:11:36] 2025-10-10 21:11:04,056 | INFO     | fitting pss+swap vs Time
[2025-10-10 17:11:36] 2025-10-10 21:11:04,056 | INFO     | sum of square deviations: 73882315.5
[2025-10-10 17:11:36] 2025-10-10 21:11:04,056 | INFO     | sum of deviations: -862920517.9999998
[2025-10-10 17:11:36] 2025-10-10 21:11:04,056 | INFO     | mean x: 1760128655.5
[2025-10-10 17:11:36] 2025-10-10 21:11:04,057 | INFO     | mean y: 2719985.3225806453
[2025-10-10 17:11:36] 2025-10-10 21:11:04,057 | INFO     | -- intersect: 20560428834.481525
[2025-10-10 17:11:36] 2025-10-10 21:11:04,057 | INFO     | intersect: 20560428834.481525
[2025-10-10 17:11:36] 2025-10-10 21:11:04,057 | INFO     | chi2: 0.04786055957302687
[2025-10-10 17:11:36] 2025-10-10 21:11:04,057 | INFO     | -- intersect: 20560428834.481525
[2025-10-10 17:11:36] 2025-10-10 21:11:04,057 | INFO     | current memory leak: -11.68 B/s (using 62 data points, chi2=0.05)
[2025-10-10 17:11:36] 2025-10-10 21:11:04,057 | INFO     | could have reported an average CPU frequency of 2071 MHz (6 samples)
[2025-10-10 17:11:36] 2025-10-10 21:11:04,058 | INFO     | ..............................
[2025-10-10 17:11:36] 2025-10-10 21:11:04,058 | INFO     | . Timing measurements:
[2025-10-10 17:11:36] 2025-10-10 21:11:04,058 | INFO     | . get job = 0 s
[2025-10-10 17:11:36] 2025-10-10 21:11:04,058 | INFO     | . initial setup = 2 s
[2025-10-10 17:11:36] 2025-10-10 21:11:04,058 | INFO     | . payload setup = 7 s
[2025-10-10 17:11:36] 2025-10-10 21:11:04,058 | INFO     | . stage-in = 0 s
[2025-10-10 17:11:36] 2025-10-10 21:11:04,058 | INFO     | . payload execution = 4168 s
[2025-10-10 17:11:36] 2025-10-10 21:11:04,058 | INFO     | . stage-out = 0 s
[2025-10-10 17:11:36] 2025-10-10 21:11:04,058 | INFO     | . log creation = 0 s
[2025-10-10 17:11:36] 2025-10-10 21:11:04,059 | INFO     | ..............................
[2025-10-10 17:11:36] 2025-10-10 21:11:04,140 | INFO     | 
[2025-10-10 17:11:36] 2025-10-10 21:11:04,141 | INFO     | job summary report
[2025-10-10 17:11:36] 2025-10-10 21:11:04,141 | INFO     | --------------------------------------------------
[2025-10-10 17:11:36] 2025-10-10 21:11:04,141 | INFO     | PanDA job id: 6837510483
[2025-10-10 17:11:36] 2025-10-10 21:11:04,141 | INFO     | task id: 46676269
[2025-10-10 17:11:36] 2025-10-10 21:11:04,141 | INFO     | errors: (none)
[2025-10-10 17:11:36] 2025-10-10 21:11:04,141 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 17:11:36] 2025-10-10 21:11:04,142 | INFO     | pilot state: finished 
[2025-10-10 17:11:36] 2025-10-10 21:11:04,142 | INFO     | transexitcode: 0
[2025-10-10 17:11:36] 2025-10-10 21:11:04,142 | INFO     | exeerrorcode: 0
[2025-10-10 17:11:36] 2025-10-10 21:11:04,142 | INFO     | exeerrordiag: 
[2025-10-10 17:11:36] 2025-10-10 21:11:04,142 | INFO     | exitcode: 0
[2025-10-10 17:11:36] 2025-10-10 21:11:04,142 | INFO     | exitmsg: OK
[2025-10-10 17:11:36] 2025-10-10 21:11:04,143 | INFO     | cpuconsumptiontime: 44961 s
[2025-10-10 17:11:36] 2025-10-10 21:11:04,143 | INFO     | nevents: 400
[2025-10-10 17:11:36] 2025-10-10 21:11:04,143 | INFO     | neventsw: 0
[2025-10-10 17:11:36] 2025-10-10 21:11:04,143 | INFO     | pid: 5118
[2025-10-10 17:11:36] 2025-10-10 21:11:04,143 | INFO     | pgrp: 5118
[2025-10-10 17:11:36] 2025-10-10 21:11:04,143 | INFO     | corecount: 12
[2025-10-10 17:11:36] 2025-10-10 21:11:04,143 | INFO     | event service: False
[2025-10-10 17:11:36] 2025-10-10 21:11:04,144 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4178: 2375072, 4179: 2375071, 4180: 2384309, 4186: 2384447}
[2025-10-10 17:11:36] 2025-10-10 21:11:04,144 | INFO     | --------------------------------------------------
[2025-10-10 17:11:36] 2025-10-10 21:11:04,144 | INFO     | 
[2025-10-10 17:11:36] 2025-10-10 21:11:04,144 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 17:11:36] 2025-10-10 21:11:04,170 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 17:11:36] 2025-10-10 21:11:04,170 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 17:11:36] 2025-10-10 21:11:04,170 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 17:11:36] 2025-10-10 21:11:04,170 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 17:11:36] 2025-10-10 21:11:04,171 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 17:11:36] 2025-10-10 21:11:04,171 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 17:11:36] 2025-10-10 21:11:04,171 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 17:11:36] 2025-10-10 21:11:04,171 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 17:11:36] 2025-10-10 21:11:04,171 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 17:11:36] 2025-10-10 21:11:04,171 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 17:11:36] 2025-10-10 21:11:04,172 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 17:11:36] 2025-10-10 21:11:04,172 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 17:11:36] 2025-10-10 21:11:04,172 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 17:11:36] 2025-10-10 21:11:04,172 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 17:11:36] 2025-10-10 21:11:04,173 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 17:11:36] 2025-10-10 21:11:04,173 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 17:11:36] 2025-10-10 21:11:04,173 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 17:11:36] 2025-10-10 21:11:04,173 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 17:11:36] 2025-10-10 21:11:04,173 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 17:11:36] 2025-10-10 21:11:04,173 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 17:11:36] 2025-10-10 21:11:04,174 | INFO     | job 6837510483 has completed (purged errors)
[2025-10-10 17:11:36] 2025-10-10 21:11:04,174 | INFO     | overall cleanup function is called
[2025-10-10 17:11:36] 2025-10-10 21:11:05,182 | INFO     | --- collectZombieJob: --- 10, [5118]
[2025-10-10 17:11:36] 2025-10-10 21:11:05,182 | INFO     | zombie collector waiting for pid 5118
[2025-10-10 17:11:36] 2025-10-10 21:11:05,182 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 17:11:36] 2025-10-10 21:11:05,182 | INFO     | collected zombie processes
[2025-10-10 17:11:36] 2025-10-10 21:11:05,182 | INFO     | will attempt to kill all subprocesses of pid=5118
[2025-10-10 17:11:36] 2025-10-10 21:11:05,277 | INFO     | process IDs to be killed: [5118] (in reverse order)
[2025-10-10 17:11:36] 2025-10-10 21:11:05,334 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 17:11:36] 2025-10-10 21:11:05,335 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 17:11:36] 2025-10-10 21:11:05,339 | INFO     | did not find any defunct processes belonging to 5118
[2025-10-10 17:11:36] 2025-10-10 21:11:05,342 | INFO     | did not find any defunct processes belonging to 5118
[2025-10-10 17:11:36] 2025-10-10 21:11:05,342 | INFO     | ready for new job
[2025-10-10 17:11:36] 2025-10-10 21:11:05,342 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 17:11:36] 2025-10-10 21:11:05,343 | INFO     | ***************************************
[2025-10-10 17:11:36] 2025-10-10 21:11:05,343 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 17:11:36] 2025-10-10 21:11:05,343 | INFO     | ***************************************
[2025-10-10 17:11:36] 2025-10-10 21:11:05,343 | INFO     | 
[2025-10-10 17:11:36] 2025-10-10 21:11:05,344 | INFO     | architecture information:
[2025-10-10 17:11:36] 2025-10-10 21:11:05,344 | INFO     | executing command: cat /etc/os-release
[2025-10-10 17:11:36] 2025-10-10 21:11:05,362 | INFO     | cat /etc/os-release:
[2025-10-10 17:11:36] NAME="CentOS Linux"
[2025-10-10 17:11:36] VERSION="7 (Core)"
[2025-10-10 17:11:36] ID="centos"
[2025-10-10 17:11:36] ID_LIKE="rhel fedora"
[2025-10-10 17:11:36] VERSION_ID="7"
[2025-10-10 17:11:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 17:11:36] ANSI_COLOR="0;31"
[2025-10-10 17:11:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 17:11:36] HOME_URL="https://www.centos.org/"
[2025-10-10 17:11:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 17:11:36] 
[2025-10-10 17:11:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 17:11:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 17:11:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 17:11:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 17:11:36] 
[2025-10-10 17:11:36] 2025-10-10 21:11:05,363 | INFO     | ***************************************
[2025-10-10 17:11:36] 2025-10-10 21:11:05,866 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 17:11:36] 2025-10-10 21:11:05,886 | INFO     | sufficient remaining disk space (29362225152 B)
[2025-10-10 17:11:36] 2025-10-10 21:11:05,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 17:11:36] 2025-10-10 21:11:05,886 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 17:11:36] 2025-10-10 21:11:05,886 | INFO     | update_server=False
[2025-10-10 17:11:36] 2025-10-10 21:11:05,887 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 17:11:36] 2025-10-10 21:11:05,887 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 17:11:36] 2025-10-10 21:11:05,887 | INFO     | aborting loop
[2025-10-10 17:11:36] 2025-10-10 21:11:05,887 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 17:11:36] 2025-10-10 21:11:05,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 17:11:36] 2025-10-10 21:11:06,039 | INFO     | all job control threads have been joined
[2025-10-10 17:11:36] 2025-10-10 21:11:06,132 | INFO     | all payload control threads have been joined
[2025-10-10 17:11:36] 2025-10-10 21:11:06,892 | INFO     | [job] retrieve thread has finished
[2025-10-10 17:11:36] 2025-10-10 21:11:06,893 | INFO     | [job] job monitor thread has finished
[2025-10-10 17:11:36] 2025-10-10 21:11:06,893 | INFO     | [job] queue monitor thread has finished
[2025-10-10 17:11:36] 2025-10-10 21:11:06,954 | INFO     | all data control threads have been joined
[2025-10-10 17:11:36] 2025-10-10 21:11:07,019 | INFO     | [data] copytool_in thread has finished
[2025-10-10 17:11:36] 2025-10-10 21:11:07,044 | INFO     | [job] control thread has finished
[2025-10-10 17:11:36] 2025-10-10 21:11:07,137 | INFO     | [payload] control thread has finished
[2025-10-10 17:11:36] 2025-10-10 21:11:07,214 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 17:11:36] 2025-10-10 21:11:07,420 | INFO     | [payload] validate_post thread has finished
[2025-10-10 17:11:36] 2025-10-10 21:11:07,438 | INFO     | [monitor] cgroup control has ended
[2025-10-10 17:11:36] 2025-10-10 21:11:07,675 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 17:11:36] 2025-10-10 21:11:07,752 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 17:11:36] 2025-10-10 21:11:07,894 | INFO     | [data] copytool_out thread has finished
[2025-10-10 17:11:36] 2025-10-10 21:11:07,960 | INFO     | [data] control thread has finished
[2025-10-10 17:11:36] 2025-10-10 21:11:08,081 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 17:11:36] 2025-10-10 21:11:08,120 | INFO     | [job] validate thread has finished
[2025-10-10 17:11:36] 2025-10-10 21:11:08,276 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 17:11:36] 2025-10-10 21:11:08,344 | INFO     | [payload] failed_post thread has finished
[2025-10-10 17:11:36] 2025-10-10 21:11:12,282 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 17:11:36] 2025-10-10 21:11:14,220 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140248725645120)>', '<ExcThread(monitor, started 140247962728192)>']
[2025-10-10 17:11:36] 2025-10-10 21:11:19,238 | INFO     | all workflow threads have been joined
[2025-10-10 17:11:36] 2025-10-10 21:11:19,238 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 17:11:36] 2025-10-10 21:11:19,239 | INFO     | traces error code: 0
[2025-10-10 17:11:36] 2025-10-10 21:11:19,239 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 17:11:36] 2025-10-10 21:11:36,240 | INFO     | PID=30956 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 17:11:36] 2025-10-10 21:11:36,240 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 17:11:36] 2025-10-10 21:11:36,240 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 17:11:36] 2025-10-10 21:11:36,240 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 17:11:36] 2025-10-10 21:11:36,240 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 17:11:36] 2025-10-10 21:11:36,240 | INFO     | [monitor] control thread has ended
[2025-10-10 17:11:36] 2025-10-10 21:11:36,324 [wrapper] ==== pilot stdout END ====
[2025-10-10 17:11:36] 2025-10-10 21:11:36,328 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 17:11:36] 2025-10-10 21:11:36,332 [wrapper] pilotpid: 30956
[2025-10-10 17:11:36] 2025-10-10 21:11:36,336 [wrapper] Pilot exit status: 0
[2025-10-10 17:11:36] 2025-10-10 21:11:36,353 [wrapper] pandaids: 6837510483
[2025-10-10 17:11:36] 2025-10-10 21:11:36,397 [wrapper] cleanup supervisor_pilot 13076 30957
[2025-10-10 17:11:36] 2025-10-10 21:11:36,401 [wrapper] Test setup, not cleaning
[2025-10-10 17:11:36] 2025-10-10 21:11:36,404 [wrapper] apfmon messages muted
[2025-10-10 17:11:36] 2025-10-10 21:11:36,408 [wrapper] ==== wrapper stdout END ====
[2025-10-10 17:11:36] 2025-10-10 21:11:36,412 [wrapper] ==== wrapper stderr END ====
[2025-10-10 17:11:36]  *** Error codes and diagnostics ***
[2025-10-10 17:11:36]     "exeErrorCode": 0,
[2025-10-10 17:11:36]     "exeErrorDiag": "",
[2025-10-10 17:11:36]     "pilotErrorCode": 0,
[2025-10-10 17:11:36]     "pilotErrorDiag": "",
[2025-10-10 17:11:36]  *** Listing of results directory ***
[2025-10-10 17:11:36] total 412580
[2025-10-10 17:11:36] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 04:04 pilot3.tar.gz
[2025-10-10 17:11:36] -rwx------ 1 boincer umatlas     36292 Oct 10 04:12 runpilot2-wrapper.sh
[2025-10-10 17:11:36] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 04:12 queuedata.json
[2025-10-10 17:11:36] -rw-r--r-- 1 boincer umatlas       100 Oct 10 16:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 17:11:36] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 16:00 run_atlas
[2025-10-10 17:11:36] -rw-r--r-- 1 boincer umatlas       105 Oct 10 16:00 job.xml
[2025-10-10 17:11:36] -rw-r--r-- 2 boincer umatlas 221079952 Oct 10 16:00 EVNT.46676267._001427.pool.root.1
[2025-10-10 17:11:36] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 16:00 start_atlas.sh
[2025-10-10 17:11:36] drwxrwx--x 2 boincer umatlas      4096 Oct 10 16:00 shared
[2025-10-10 17:11:36] -rw-r--r-- 2 boincer umatlas    569678 Oct 10 16:00 input.tar.gz
[2025-10-10 17:11:36] -rw-r--r-- 1 boincer umatlas         0 Oct 10 16:00 boinc_lockfile
[2025-10-10 17:11:36] -rw-r--r-- 1 boincer umatlas      2550 Oct 10 16:00 pandaJob.out
[2025-10-10 17:11:36] -rw------- 1 boincer umatlas    975541 Oct 10 16:00 agis_schedconf.cvmfs.json
[2025-10-10 17:11:36] -rw------- 1 boincer umatlas   1560580 Oct 10 16:01 agis_ddmendpoints.agis.ALL.json
[2025-10-10 17:11:36] drwx------ 5 boincer umatlas      4096 Oct 10 16:01 pilot3
[2025-10-10 17:11:36] -rw------- 1 boincer umatlas 195497814 Oct 10 17:10 HITS.46676269._035098.pool.root.1
[2025-10-10 17:11:36] -rw-r--r-- 1 boincer umatlas       530 Oct 10 17:10 boinc_task_state.xml
[2025-10-10 17:11:36] -rw------- 1 boincer umatlas      1050 Oct 10 17:10 memory_monitor_summary.json
[2025-10-10 17:11:36] -rw------- 1 boincer umatlas        95 Oct 10 17:10 pilot_heartbeat.json
[2025-10-10 17:11:36] -rw------- 1 boincer umatlas    387699 Oct 10 17:10 log.46676269._035098.job.log.tgz.1
[2025-10-10 17:11:36] -rw------- 1 boincer umatlas      7855 Oct 10 17:11 heartbeat.json
[2025-10-10 17:11:36] -rw-r--r-- 1 boincer umatlas      5953 Oct 10 17:11 init_data.xml
[2025-10-10 17:11:36] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 17:11 boinc_mmap_file
[2025-10-10 17:11:36] -rw-r--r-- 1 boincer umatlas        27 Oct 10 17:11 wrapper_checkpoint.txt
[2025-10-10 17:11:36] -rw------- 1 boincer umatlas       745 Oct 10 17:11 pilotlog.txt
[2025-10-10 17:11:36] -rw------- 1 boincer umatlas    613278 Oct 10 17:11 log.46676269._035098.job.log.1
[2025-10-10 17:11:36] -rw------- 1 boincer umatlas       357 Oct 10 17:11 output.list
[2025-10-10 17:11:36] -rw-r--r-- 1 boincer umatlas       620 Oct 10 17:11 runtime_log
[2025-10-10 17:11:36] -rw------- 1 boincer umatlas   1024000 Oct 10 17:11 result.tar.gz
[2025-10-10 17:11:36] -rw-r--r-- 1 boincer umatlas      8705 Oct 10 17:11 runtime_log.err
[2025-10-10 17:11:36] -rw------- 1 boincer umatlas       659 Oct 10 17:11 2DSKDmYPNR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWncNDmPHMR2n.diag
[2025-10-10 17:11:36] -rw-r--r-- 1 boincer umatlas     21624 Oct 10 17:11 stderr.txt
[2025-10-10 17:11:36] HITS file was successfully produced:
[2025-10-10 17:11:36] -rw------- 1 boincer umatlas 195497814 Oct 10 17:10 shared/HITS.pool.root.1
[2025-10-10 17:11:36]  *** Contents of shared directory: ***
[2025-10-10 17:11:36] total 408400
[2025-10-10 17:11:36] -rw-r--r-- 2 boincer umatlas 221079952 Oct 10 16:00 ATLAS.root_0
[2025-10-10 17:11:36] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 16:00 start_atlas.sh
[2025-10-10 17:11:36] -rw-r--r-- 2 boincer umatlas    569678 Oct 10 16:00 input.tar.gz
[2025-10-10 17:11:36] -rw------- 1 boincer umatlas 195497814 Oct 10 17:10 HITS.pool.root.1
[2025-10-10 17:11:36] -rw------- 1 boincer umatlas   1024000 Oct 10 17:11 result.tar.gz
17:11:38 (27288): run_atlas exited; CPU time 44958.337706
17:11:38 (27288): called boinc_finish(0)

</stderr_txt>
]]>

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