Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:06:13 (3662590): wrapper (7.7.26015): starting
19:06:13 (3662590): wrapper: running run_atlas (--nthreads 6)
[2025-10-11 19:06:13] Arguments: --nthreads 6
[2025-10-11 19:06:13] Threads: 6
[2025-10-11 19:06:13] Checking for CVMFS
[2025-10-11 19:06:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:06:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:06:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:06:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:06:13] 2.13.1.0 2207704 2242 65648 151579 3 57 30609967 52428801 922 130560 0 4457841 99.996 78757 127 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 19:06:13] CVMFS is ok
[2025-10-11 19:06:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:06:13] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 19:06:13] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 19:06:13] Further information can be found at the LHC@home message board.
[2025-10-11 19:06:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:06:13] Checking for apptainer binary...
[2025-10-11 19:06:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:06:13] Running /usr/bin/apptainer --version
[2025-10-11 19:06:13] apptainer version 1.4.1-1.el9
[2025-10-11 19:06:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:06:13] Atto003
[2025-10-11 19:06:13] apptainer works
[2025-10-11 19:06:13] Set ATHENA_PROC_NUMBER=6
[2025-10-11 19:06:13] Set ATHENA_CORE_NUMBER=6
[2025-10-11 19:06:13] Starting ATLAS job with PandaID=6837558596
[2025-10-11 19:06:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:23:34]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:23:34] 2025-10-11 11:22:20,270 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 20:23:34] 2025-10-11 11:22:21,430 | INFO     | job 6837558596 has state=finished
[2025-10-11 20:23:34] 2025-10-11 11:22:21,430 | INFO     | preparing for final server update for job 6837558596 in state='finished'
[2025-10-11 20:23:34] 2025-10-11 11:22:22,179 | INFO     | time since job start (4561s) is within the limit (172800.0s)
[2025-10-11 20:23:34] 2025-10-11 11:22:22,564 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-11 20:23:34] 2025-10-11 11:22:22,564 | INFO     | this job has now completed (state=finished)
[2025-10-11 20:23:34] 2025-10-11 11:22:22,564 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 20:23:34] 2025-10-11 11:22:22,564 | INFO     | log transfer has been attempted: DONE
[2025-10-11 20:23:34] 2025-10-11 11:22:22,564 | INFO     | job 6837558596 has finished - writing final server update
[2025-10-11 20:23:34] 2025-10-11 11:22:22,564 | INFO     | total number of processed events: 400 (read)
[2025-10-11 20:23:34] 2025-10-11 11:22:22,565 | INFO     | executing command: lscpu
[2025-10-11 20:23:34] 2025-10-11 11:22:22,574 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 20:23:34] 2025-10-11 11:22:24,058 | WARNING  | process 3673127 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 20:23:34] 2025-10-11 11:22:24,059 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6837558596/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 20:23:34] 2025-10-11 11:22:24,105 | INFO     | number of running child processes to parent process 3673127: 1
[2025-10-11 20:23:34] 2025-10-11 11:22:24,105 | INFO     | maximum number of monitored processes: 6
[2025-10-11 20:23:34] 2025-10-11 11:22:24,184 | INFO     | time since job start (4563s) is within the limit (172800.0s)
[2025-10-11 20:23:34] 2025-10-11 11:22:25,260 | INFO     | PID=3666388 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 20:23:34] 2025-10-11 11:22:25,260 | INFO     | .. there are 2 such processes running
[2025-10-11 20:23:34] 2025-10-11 11:22:26,261 | INFO     | time since job start (4565s) is within the limit (172800.0s)
[2025-10-11 20:23:34] 2025-10-11 11:22:26,607 | INFO     | monitor loop #348: job 0:6837558596 is in state 'finished'
[2025-10-11 20:23:34] 2025-10-11 11:22:26,607 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:23:34] 2025-10-11 11:22:28,266 | INFO     | time since job start (4567s) is within the limit (172800.0s)
[2025-10-11 20:23:34] 2025-10-11 11:22:29,109 | INFO     | monitor loop #349: job 0:6837558596 is in state 'finished'
[2025-10-11 20:23:34] 2025-10-11 11:22:29,109 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:23:34] 2025-10-11 11:22:30,270 | INFO     | time since job start (4569s) is within the limit (172800.0s)
[2025-10-11 20:23:34] 2025-10-11 11:22:31,612 | INFO     | monitor loop #350: job 0:6837558596 is in state 'finished'
[2025-10-11 20:23:34] 2025-10-11 11:22:31,612 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:23:34] 2025-10-11 11:22:32,275 | INFO     | time since job start (4571s) is within the limit (172800.0s)
[2025-10-11 20:23:34] 2025-10-11 11:22:34,114 | INFO     | monitor loop #351: job 0:6837558596 is in state 'finished'
[2025-10-11 20:23:34] 2025-10-11 11:22:34,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:23:34] 2025-10-11 11:22:34,281 | INFO     | time since job start (4573s) is within the limit (172800.0s)
[2025-10-11 20:23:34] 2025-10-11 11:22:36,286 | INFO     | time since job start (4575s) is within the limit (172800.0s)
[2025-10-11 20:23:34] 2025-10-11 11:22:36,616 | INFO     | monitor loop #352: job 0:6837558596 is in state 'finished'
[2025-10-11 20:23:34] 2025-10-11 11:22:36,616 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:23:34] 2025-10-11 11:22:38,291 | INFO     | time since job start (4577s) is within the limit (172800.0s)
[2025-10-11 20:23:34] 2025-10-11 11:22:38,666 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 20:23:34] 2025-10-11 11:22:38,668 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3900.1497500000005
[2025-10-11 20:23:34] 2025-10-11 11:22:38,669 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6837558596/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 20:23:34] 2025-10-11 11:22:38,669 | INFO     | extracted standard info from prmon json
[2025-10-11 20:23:34] 2025-10-11 11:22:38,669 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 20:23:34] 2025-10-11 11:22:38,669 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 20:23:34] 2025-10-11 11:22:38,669 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 20:23:34] 2025-10-11 11:22:38,669 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:23:34] 2025-10-11 11:22:38,670 | INFO     | fitting pss+swap vs Time
[2025-10-11 20:23:34] 2025-10-11 11:22:38,670 | INFO     | sum of square deviations: 97479037.0
[2025-10-11 20:23:34] 2025-10-11 11:22:38,670 | INFO     | sum of deviations: -701034508.9999999
[2025-10-11 20:23:34] 2025-10-11 11:22:38,670 | INFO     | mean x: 1760179549.5
[2025-10-11 20:23:34] 2025-10-11 11:22:38,670 | INFO     | mean y: 2456476.1470588236
[2025-10-11 20:23:34] 2025-10-11 11:22:38,671 | INFO     | -- intersect: 12661040764.742088
[2025-10-11 20:23:34] 2025-10-11 11:22:38,671 | INFO     | intersect: 12661040764.742088
[2025-10-11 20:23:34] 2025-10-11 11:22:38,671 | INFO     | chi2: 0.015383547302909322
[2025-10-11 20:23:34] 2025-10-11 11:22:38,671 | INFO     | -- intersect: 12661040764.742088
[2025-10-11 20:23:34] 2025-10-11 11:22:38,671 | INFO     | current memory leak: -7.19 B/s (using 68 data points, chi2=0.02)
[2025-10-11 20:23:34] 2025-10-11 11:22:38,671 | INFO     | could have reported an average CPU frequency of 3801 MHz (6 samples)
[2025-10-11 20:23:34] 2025-10-11 11:22:38,671 | INFO     | ..............................
[2025-10-11 20:23:34] 2025-10-11 11:22:38,671 | INFO     | . Timing measurements:
[2025-10-11 20:23:34] 2025-10-11 11:22:38,671 | INFO     | . get job = 0 s
[2025-10-11 20:23:34] 2025-10-11 11:22:38,671 | INFO     | . initial setup = 4 s
[2025-10-11 20:23:34] 2025-10-11 11:22:38,671 | INFO     | . payload setup = 4 s
[2025-10-11 20:23:34] 2025-10-11 11:22:38,671 | INFO     | . stage-in = 0 s
[2025-10-11 20:23:34] 2025-10-11 11:22:38,671 | INFO     | . payload execution = 4536 s
[2025-10-11 20:23:34] 2025-10-11 11:22:38,671 | INFO     | . stage-out = 0 s
[2025-10-11 20:23:34] 2025-10-11 11:22:38,671 | INFO     | . log creation = 0 s
[2025-10-11 20:23:34] 2025-10-11 11:22:38,671 | INFO     | ..............................
[2025-10-11 20:23:34] 2025-10-11 11:22:38,705 | INFO     | 
[2025-10-11 20:23:34] 2025-10-11 11:22:38,705 | INFO     | job summary report
[2025-10-11 20:23:34] 2025-10-11 11:22:38,705 | INFO     | --------------------------------------------------
[2025-10-11 20:23:34] 2025-10-11 11:22:38,705 | INFO     | PanDA job id: 6837558596
[2025-10-11 20:23:34] 2025-10-11 11:22:38,705 | INFO     | task id: 46676269
[2025-10-11 20:23:34] 2025-10-11 11:22:38,705 | INFO     | errors: (none)
[2025-10-11 20:23:34] 2025-10-11 11:22:38,706 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:23:34] 2025-10-11 11:22:38,706 | INFO     | pilot state: finished 
[2025-10-11 20:23:34] 2025-10-11 11:22:38,706 | INFO     | transexitcode: 0
[2025-10-11 20:23:34] 2025-10-11 11:22:38,706 | INFO     | exeerrorcode: 0
[2025-10-11 20:23:34] 2025-10-11 11:22:38,706 | INFO     | exeerrordiag: 
[2025-10-11 20:23:34] 2025-10-11 11:22:38,706 | INFO     | exitcode: 0
[2025-10-11 20:23:34] 2025-10-11 11:22:38,706 | INFO     | exitmsg: OK
[2025-10-11 20:23:34] 2025-10-11 11:22:38,706 | INFO     | cpuconsumptiontime: 25016 s
[2025-10-11 20:23:34] 2025-10-11 11:22:38,706 | INFO     | nevents: 400
[2025-10-11 20:23:34] 2025-10-11 11:22:38,706 | INFO     | neventsw: 0
[2025-10-11 20:23:34] 2025-10-11 11:22:38,706 | INFO     | pid: 3673127
[2025-10-11 20:23:34] 2025-10-11 11:22:38,706 | INFO     | pgrp: 3673127
[2025-10-11 20:23:34] 2025-10-11 11:22:38,706 | INFO     | corecount: 6
[2025-10-11 20:23:34] 2025-10-11 11:22:38,706 | INFO     | event service: False
[2025-10-11 20:23:34] 2025-10-11 11:22:38,706 | INFO     | sizes: {0: 2348857, 1: 2348885, 2: 2349147, 11: 2349175, 4544: 2375401, 4545: 2384399, 4546: 2384583, 4564: 2384777}
[2025-10-11 20:23:34] 2025-10-11 11:22:38,706 | INFO     | --------------------------------------------------
[2025-10-11 20:23:34] 2025-10-11 11:22:38,707 | INFO     | 
[2025-10-11 20:23:34] 2025-10-11 11:22:38,707 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-11 20:23:34] 2025-10-11 11:22:38,714 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:23:34] 2025-10-11 11:22:38,715 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:23:34] 2025-10-11 11:22:38,715 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:23:34] 2025-10-11 11:22:38,715 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:23:34] 2025-10-11 11:22:38,715 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:23:34] 2025-10-11 11:22:38,715 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:23:34] 2025-10-11 11:22:38,715 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:23:34] 2025-10-11 11:22:38,715 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:23:34] 2025-10-11 11:22:38,715 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:23:34] 2025-10-11 11:22:38,715 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:23:34] 2025-10-11 11:22:38,715 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:23:34] 2025-10-11 11:22:38,715 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:23:34] 2025-10-11 11:22:38,715 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:23:34] 2025-10-11 11:22:38,715 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:23:34] 2025-10-11 11:22:38,716 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:23:34] 2025-10-11 11:22:38,716 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:23:34] 2025-10-11 11:22:38,716 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:23:34] 2025-10-11 11:22:38,716 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:23:34] 2025-10-11 11:22:38,716 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:23:34] 2025-10-11 11:22:38,716 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:23:34] 2025-10-11 11:22:38,716 | INFO     | job 6837558596 has completed (purged errors)
[2025-10-11 20:23:34] 2025-10-11 11:22:38,716 | INFO     | overall cleanup function is called
[2025-10-11 20:23:34] 2025-10-11 11:22:39,722 | INFO     | --- collectZombieJob: --- 10, [3673127]
[2025-10-11 20:23:34] 2025-10-11 11:22:39,722 | INFO     | zombie collector waiting for pid 3673127
[2025-10-11 20:23:34] 2025-10-11 11:22:39,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:23:34] 2025-10-11 11:22:39,723 | INFO     | collected zombie processes
[2025-10-11 20:23:34] 2025-10-11 11:22:39,723 | INFO     | will attempt to kill all subprocesses of pid=3673127
[2025-10-11 20:23:34] 2025-10-11 11:22:39,793 | INFO     | process IDs to be killed: [3673127] (in reverse order)
[2025-10-11 20:23:34] 2025-10-11 11:22:39,811 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:23:34] 2025-10-11 11:22:39,811 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:23:34] 2025-10-11 11:22:39,812 | INFO     | did not find any defunct processes belonging to 3673127
[2025-10-11 20:23:34] 2025-10-11 11:22:39,813 | INFO     | did not find any defunct processes belonging to 3673127
[2025-10-11 20:23:34] 2025-10-11 11:22:39,813 | INFO     | ready for new job
[2025-10-11 20:23:34] 2025-10-11 11:22:39,813 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:23:34] 2025-10-11 11:22:39,814 | INFO     | ***************************************
[2025-10-11 20:23:34] 2025-10-11 11:22:39,814 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 20:23:34] 2025-10-11 11:22:39,814 | INFO     | ***************************************
[2025-10-11 20:23:34] 2025-10-11 11:22:39,814 | INFO     | 
[2025-10-11 20:23:34] 2025-10-11 11:22:39,814 | INFO     | architecture information:
[2025-10-11 20:23:34] 2025-10-11 11:22:39,815 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:23:34] 2025-10-11 11:22:39,820 | INFO     | cat /etc/os-release:
[2025-10-11 20:23:34] NAME="CentOS Linux"
[2025-10-11 20:23:34] VERSION="7 (Core)"
[2025-10-11 20:23:34] ID="centos"
[2025-10-11 20:23:34] ID_LIKE="rhel fedora"
[2025-10-11 20:23:34] VERSION_ID="7"
[2025-10-11 20:23:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:23:34] ANSI_COLOR="0;31"
[2025-10-11 20:23:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:23:34] HOME_URL="https://www.centos.org/"
[2025-10-11 20:23:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:23:34] 
[2025-10-11 20:23:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:23:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:23:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:23:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:23:34] 
[2025-10-11 20:23:34] 2025-10-11 11:22:39,820 | INFO     | ***************************************
[2025-10-11 20:23:34] 2025-10-11 11:22:40,323 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-11 20:23:34] 2025-10-11 11:22:40,330 | INFO     | sufficient remaining disk space (108778225664 B)
[2025-10-11 20:23:34] 2025-10-11 11:22:40,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:23:34] 2025-10-11 11:22:40,330 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:23:34] 2025-10-11 11:22:40,330 | INFO     | update_server=False
[2025-10-11 20:23:34] 2025-10-11 11:22:40,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:23:34] 2025-10-11 11:22:40,330 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:23:34] 2025-10-11 11:22:40,330 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:23:34] 2025-10-11 11:22:40,330 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:23:34] 2025-10-11 11:22:40,331 | INFO     | aborting loop
[2025-10-11 20:23:34] 2025-10-11 11:22:40,395 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:23:34] 2025-10-11 11:22:41,015 | INFO     | all job control threads have been joined
[2025-10-11 20:23:34] 2025-10-11 11:22:41,101 | INFO     | all data control threads have been joined
[2025-10-11 20:23:34] 2025-10-11 11:22:41,335 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:23:34] 2025-10-11 11:22:41,336 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:23:34] 2025-10-11 11:22:41,336 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:23:34] 2025-10-11 11:22:41,529 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:23:34] 2025-10-11 11:22:41,567 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:23:34] 2025-10-11 11:22:41,780 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:23:34] 2025-10-11 11:22:41,782 | INFO     | all payload control threads have been joined
[2025-10-11 20:23:34] 2025-10-11 11:22:41,974 | INFO     | [job] validate thread has finished
[2025-10-11 20:23:34] 2025-10-11 11:22:41,981 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:23:34] 2025-10-11 11:22:42,020 | INFO     | [job] control thread has finished
[2025-10-11 20:23:34] 2025-10-11 11:22:42,059 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:23:34] 2025-10-11 11:22:42,107 | INFO     | [data] control thread has finished
[2025-10-11 20:23:34] 2025-10-11 11:22:42,302 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:23:34] 2025-10-11 11:22:42,401 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:23:34] 2025-10-11 11:22:42,453 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:23:34] 2025-10-11 11:22:42,787 | INFO     | [payload] control thread has finished
[2025-10-11 20:23:34] 2025-10-11 11:22:44,336 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:23:34] 2025-10-11 11:23:11,425 | INFO     | PID=3666388 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 20:23:34] 2025-10-11 11:23:11,425 | INFO     | .. there are 2 such processes running
[2025-10-11 20:23:34] 2025-10-11 11:23:11,425 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:23:34] 2025-10-11 11:23:11,425 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:23:34] 2025-10-11 11:23:11,425 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:23:34] 2025-10-11 11:23:28,182 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:23:34] 2025-10-11 11:23:29,371 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140214429161280)>', '<ExcThread(monitor, started 140213921748736)>']
[2025-10-11 20:23:34] 2025-10-11 11:23:29,515 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:23:34] 2025-10-11 11:23:29,515 | INFO     | [monitor] control thread has ended
[2025-10-11 20:23:34] 2025-10-11 11:23:34,396 | INFO     | all workflow threads have been joined
[2025-10-11 20:23:34] 2025-10-11 11:23:34,397 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:23:34] 2025-10-11 11:23:34,397 | INFO     | traces error code: 0
[2025-10-11 20:23:34] 2025-10-11 11:23:34,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:23:34] 2025-10-11 11:23:34,456 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:23:34] 2025-10-11 11:23:34,457 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:23:34] 2025-10-11 11:23:34,458 [wrapper] pilotpid: 3666388
[2025-10-11 20:23:34] 2025-10-11 11:23:34,459 [wrapper] Pilot exit status: 0
[2025-10-11 20:23:34] 2025-10-11 11:23:34,462 [wrapper] pandaids: 6837558596
[2025-10-11 20:23:34] 2025-10-11 11:23:34,474 [wrapper] cleanup supervisor_pilot 3711397 3666389
[2025-10-11 20:23:34] 2025-10-11 11:23:34,475 [wrapper] Test setup, not cleaning
[2025-10-11 20:23:34] 2025-10-11 11:23:34,476 [wrapper] apfmon messages muted
[2025-10-11 20:23:34] 2025-10-11 11:23:34,477 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:23:34] 2025-10-11 11:23:34,478 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:23:34]  *** Error codes and diagnostics ***
[2025-10-11 20:23:34]     "exeErrorCode": 0,
[2025-10-11 20:23:34]     "exeErrorDiag": "",
[2025-10-11 20:23:34]     "pilotErrorCode": 0,
[2025-10-11 20:23:34]     "pilotErrorDiag": "",
[2025-10-11 20:23:34]  *** Listing of results directory ***
[2025-10-11 20:23:34] total 417148
[2025-10-11 20:23:34] -rw-r--r--. 1 boinc boinc    557409 Oct 10 19:29 pilot3.tar.gz
[2025-10-11 20:23:34] -rw-r--r--. 1 boinc boinc      5112 Oct 10 19:36 queuedata.json
[2025-10-11 20:23:34] -rwx------. 1 boinc boinc     36292 Oct 10 19:36 runpilot2-wrapper.sh
[2025-10-11 20:23:34] -rw-r--r--. 1 boinc boinc       100 Oct 11 19:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:23:34] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 19:06 run_atlas
[2025-10-11 20:23:34] -rw-r--r--. 1 boinc boinc       105 Oct 11 19:06 job.xml
[2025-10-11 20:23:34] -rw-r--r--. 1 boinc boinc      9345 Oct 11 19:06 init_data.xml
[2025-10-11 20:23:34] -rw-r--r--. 2 boinc boinc 222982052 Oct 11 19:06 EVNT.46676267._001500.pool.root.1
[2025-10-11 20:23:34] -rw-r--r--. 2 boinc boinc     15120 Oct 11 19:06 start_atlas.sh
[2025-10-11 20:23:34] drwxrwx--x. 2 boinc boinc        68 Oct 11 19:06 shared
[2025-10-11 20:23:34] -rw-r--r--. 2 boinc boinc    569682 Oct 11 19:06 input.tar.gz
[2025-10-11 20:23:34] -rw-r--r--. 1 boinc boinc         0 Oct 11 19:06 boinc_lockfile
[2025-10-11 20:23:34] -rw-r--r--. 1 boinc boinc      2550 Oct 11 19:06 pandaJob.out
[2025-10-11 20:23:34] -rw-------. 1 boinc boinc    975525 Oct 11 19:06 agis_schedconf.cvmfs.json
[2025-10-11 20:23:34] -rw-------. 1 boinc boinc   1560580 Oct 11 19:06 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:23:34] drwx------. 5 boinc boinc      4096 Oct 11 19:06 pilot3
[2025-10-11 20:23:34] -rw-------. 1 boinc boinc 198335268 Oct 11 20:21 HITS.46676269._036918.pool.root.1
[2025-10-11 20:23:34] -rw-r--r--. 1 boinc boinc       529 Oct 11 20:22 boinc_task_state.xml
[2025-10-11 20:23:34] -rw-------. 1 boinc boinc      1020 Oct 11 20:22 memory_monitor_summary.json
[2025-10-11 20:23:34] -rw-------. 1 boinc boinc    287930 Oct 11 20:22 log.46676269._036918.job.log.tgz.1
[2025-10-11 20:23:34] -rw-------. 1 boinc boinc      7768 Oct 11 20:22 heartbeat.json
[2025-10-11 20:23:34] -rw-------. 1 boinc boinc        95 Oct 11 20:23 pilot_heartbeat.json
[2025-10-11 20:23:34] -rw-r--r--. 1 boinc boinc      8192 Oct 11 20:23 boinc_mmap_file
[2025-10-11 20:23:34] -rw-r--r--. 1 boinc boinc        27 Oct 11 20:23 wrapper_checkpoint.txt
[2025-10-11 20:23:34] -rw-------. 1 boinc boinc      4824 Oct 11 20:23 pilotlog.txt
[2025-10-11 20:23:34] -rw-------. 1 boinc boinc    685306 Oct 11 20:23 log.46676269._036918.job.log.1
[2025-10-11 20:23:34] -rw-------. 1 boinc boinc       357 Oct 11 20:23 output.list
[2025-10-11 20:23:34] -rw-r--r--. 1 boinc boinc       620 Oct 11 20:23 runtime_log
[2025-10-11 20:23:34] -rw-------. 1 boinc boinc    993280 Oct 11 20:23 result.tar.gz
[2025-10-11 20:23:34] -rw-r--r--. 1 boinc boinc      8651 Oct 11 20:23 runtime_log.err
[2025-10-11 20:23:34] -rw-------. 1 boinc boinc       639 Oct 11 20:23 ELOODmVfPR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmu4cNDmldpqOo.diag
[2025-10-11 20:23:34] -rw-r--r--. 1 boinc boinc     22333 Oct 11 20:23 stderr.txt
[2025-10-11 20:23:34] HITS file was successfully produced:
[2025-10-11 20:23:34] -rw-------. 1 boinc boinc 198335268 Oct 11 20:21 shared/HITS.pool.root.1
[2025-10-11 20:23:34]  *** Contents of shared directory: ***
[2025-10-11 20:23:34] total 412992
[2025-10-11 20:23:34] -rw-r--r--. 2 boinc boinc 222982052 Oct 11 19:06 ATLAS.root_0
[2025-10-11 20:23:34] -rw-r--r--. 2 boinc boinc     15120 Oct 11 19:06 start_atlas.sh
[2025-10-11 20:23:34] -rw-r--r--. 2 boinc boinc    569682 Oct 11 19:06 input.tar.gz
[2025-10-11 20:23:34] -rw-------. 1 boinc boinc 198335268 Oct 11 20:21 HITS.pool.root.1
[2025-10-11 20:23:34] -rw-------. 1 boinc boinc    993280 Oct 11 20:23 result.tar.gz
20:23:35 (3662590): run_atlas exited; CPU time 25066.280430
20:23:35 (3662590): called boinc_finish(0)

</stderr_txt>
]]>

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