Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:08:14 (867392): wrapper (7.7.26015): starting
12:08:14 (867392): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 12:08:14] Arguments: --nthreads 8
[2025-10-10 12:08:14] Threads: 8
[2025-10-10 12:08:14] Checking for CVMFS
[2025-10-10 12:08:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 12:08:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 12:08:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 12:08:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 12:08:15] 2.11.3.0 98278 27414 215120 151558 0 677 38751553 45568001 11979 130560 0 187305906 99.852 82772637 14441 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-10 12:08:15] CVMFS is ok
[2025-10-10 12:08:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 12:08:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 12:08:15] Further information can be found at the LHC@home message board.
[2025-10-10 12:08:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 12:08:15] Checking for apptainer binary...
[2025-10-10 12:08:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 12:08:15] Running /usr/bin/apptainer --version
[2025-10-10 12:08:15] apptainer version 1.4.1-1.el9
[2025-10-10 12:08:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 12:08:16] wns0010.triumf.lcg
[2025-10-10 12:08:16] apptainer works
[2025-10-10 12:08:16] Set ATHENA_PROC_NUMBER=8
[2025-10-10 12:08:16] Set ATHENA_CORE_NUMBER=8
[2025-10-10 12:08:16] Starting ATLAS job with PandaID=6837669450
[2025-10-10 12:08:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 12:15:21]  *** The last 200 lines of the pilot log: ***
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | ..............................
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . Timing measurements:
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . get job = 0 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . initial setup = 6 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . payload setup = 27 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . stage-in = 0 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . payload execution = 115 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . stage-out = 0 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . log creation = 0 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | ..............................
[2025-10-10 12:15:21] 2025-10-10 19:14:46,598 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 12:15:21] 2025-10-10 19:14:46,598 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837669450/pilotlog.txt
[2025-10-10 12:15:21] 2025-10-10 19:14:46,700 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-10 12:15:21] - Log from pilotlog.txt -
[2025-10-10 12:15:21] 2025-10-10 19:14:46,570 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837669450/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 12:15:21] 2025-10-10 19:14:46,570 | INFO     | extracted standard info from prmon json
[2025-10-10 12:15:21] 2025-10-10 19:14:46,571 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 12:15:21] 2025-10-10 19:14:46,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 12:15:21] 2025-10-10 19:14:46,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 12:15:21] 2025-10-10 19:14:46,596 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 12:15:21] 2025-10-10 19:14:46,596 | WARNING  | wrong length of table data, x=[1760123452.0, 1760123513.0], y=[1078.0, 498168.0] (must be same and length>=4)
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | ..............................
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . Timing measurements:
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . get job = 0 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . initial setup = 6 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . payload setup = 27 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . stage-in = 0 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . payload execution = 115 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . stage-out = 0 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . log creation = 0 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | ..............................
[2025-10-10 12:15:21] 2025-10-10 19:14:46,598 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 12:15:21] 2025-10-10 19:14:46,598 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837669450/pilotlog.txt
[2025-10-10 12:15:21] 2025-10-10 19:14:46,701 | WARNING  | 
[2025-10-10 12:15:21] [begin log extracts]
[2025-10-10 12:15:21] - Log from pilotlog.txt -
[2025-10-10 12:15:21] 2025-10-10 19:14:46,570 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837669450/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 12:15:21] 2025-10-10 19:14:46,570 | INFO     | extracted standard info from prmon json
[2025-10-10 12:15:21] 2025-10-10 19:14:46,571 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 12:15:21] 2025-10-10 19:14:46,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 12:15:21] 2025-10-10 19:14:46,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 12:15:21] 2025-10-10 19:14:46,596 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 12:15:21] 2025-10-10 19:14:46,596 | WARNING  | wrong length of table data, x=[1760123452.0, 1760123513.0], y=[1078.0, 498168.0] (must be same and length>=4)
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | ..............................
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . Timing measurements:
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . get job = 0 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . initial setup = 6 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . payload setup = 27 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . stage-in = 0 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . payload execution = 115 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . stage-out = 0 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | . log creation = 0 s
[2025-10-10 12:15:21] 2025-10-10 19:14:46,597 | INFO     | ..............................
[2025-10-10 12:15:21] 2025-10-10 19:14:46,598 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 12:15:21] 2025-10-10 19:14:46,598 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837669450/pilotlog.txt
[2025-10-10 12:15:21] [end log extracts]
[2025-10-10 12:15:21] 2025-10-10 19:14:46,701 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-10 12:15:21] 2025-10-10 19:14:46,702 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-10 12:15:21] 2025-10-10 19:14:47,176 | INFO     | 
[2025-10-10 12:15:21] 2025-10-10 19:14:47,176 | INFO     | job summary report
[2025-10-10 12:15:21] 2025-10-10 19:14:47,177 | INFO     | --------------------------------------------------
[2025-10-10 12:15:21] 2025-10-10 19:14:47,177 | INFO     | PanDA job id: 6837669450
[2025-10-10 12:15:21] 2025-10-10 19:14:47,177 | INFO     | task id: 46676269
[2025-10-10 12:15:21] 2025-10-10 19:14:47,177 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-10 12:12:12,825 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-10 12:15:21] 2025-10-10 19:14:47,177 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 12:15:21] 2025-10-10 19:14:47,177 | INFO     | pilot state: failed 
[2025-10-10 12:15:21] 2025-10-10 19:14:47,177 | INFO     | transexitcode: 65
[2025-10-10 12:15:21] 2025-10-10 19:14:47,177 | INFO     | exeerrorcode: 65
[2025-10-10 12:15:21] 2025-10-10 19:14:47,177 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 12:15:21] 2025-10-10 19:14:47,177 | INFO     | exitcode: 65
[2025-10-10 12:15:21] 2025-10-10 19:14:47,177 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 12:15:21] 2025-10-10 19:14:47,177 | INFO     | cpuconsumptiontime: 20 s
[2025-10-10 12:15:21] 2025-10-10 19:14:47,177 | INFO     | nevents: 0
[2025-10-10 12:15:21] 2025-10-10 19:14:47,177 | INFO     | neventsw: 0
[2025-10-10 12:15:21] 2025-10-10 19:14:47,177 | INFO     | pid: 878077
[2025-10-10 12:15:21] 2025-10-10 19:14:47,178 | INFO     | pgrp: 878077
[2025-10-10 12:15:21] 2025-10-10 19:14:47,178 | INFO     | corecount: 8
[2025-10-10 12:15:21] 2025-10-10 19:14:47,178 | INFO     | event service: False
[2025-10-10 12:15:21] 2025-10-10 19:14:47,178 | INFO     | sizes: {0: 2348029, 1: 2348711, 2: 2348910, 13: 2348910, 24: 2348966, 27: 2349256, 35: 2349412, 146: 2372821, 147: 2377113, 150: 2377141, 286: 2377307}
[2025-10-10 12:15:21] 2025-10-10 19:14:47,178 | INFO     | --------------------------------------------------
[2025-10-10 12:15:21] 2025-10-10 19:14:47,178 | INFO     | 
[2025-10-10 12:15:21] 2025-10-10 19:14:47,178 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-10 12:15:21] 2025-10-10 19:14:47,225 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 12:15:21] 2025-10-10 19:14:47,226 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 12:15:21] 2025-10-10 19:14:47,226 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 12:15:21] 2025-10-10 19:14:47,226 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 12:15:21] 2025-10-10 19:14:47,226 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 12:15:21] 2025-10-10 19:14:47,226 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 12:15:21] 2025-10-10 19:14:47,227 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 12:15:21] 2025-10-10 19:14:47,227 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 12:15:21] 2025-10-10 19:14:47,227 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 12:15:21] 2025-10-10 19:14:47,227 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 12:15:21] 2025-10-10 19:14:47,227 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 12:15:21] 2025-10-10 19:14:47,227 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 12:15:21] 2025-10-10 19:14:47,227 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 12:15:21] 2025-10-10 19:14:47,227 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 12:15:21] 2025-10-10 19:14:47,227 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 12:15:21] 2025-10-10 19:14:47,227 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 12:15:21] 2025-10-10 19:14:47,227 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 12:15:21] 2025-10-10 19:14:47,227 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 12:15:21] 2025-10-10 19:14:47,227 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 12:15:21] 2025-10-10 19:14:47,228 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 12:15:21] 2025-10-10 19:14:47,228 | INFO     | job 6837669450 has completed (purged errors)
[2025-10-10 12:15:21] 2025-10-10 19:14:47,228 | INFO     | overall cleanup function is called
[2025-10-10 12:15:21] 2025-10-10 19:14:47,778 | INFO     | PID=871140 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 12:15:21] 2025-10-10 19:14:47,778 | INFO     | .. there are 26 such processes running
[2025-10-10 12:15:21] 2025-10-10 19:14:48,243 | INFO     | --- collectZombieJob: --- 10, [878077]
[2025-10-10 12:15:21] 2025-10-10 19:14:48,243 | INFO     | zombie collector waiting for pid 878077
[2025-10-10 12:15:21] 2025-10-10 19:14:48,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 12:15:21] 2025-10-10 19:14:48,243 | INFO     | collected zombie processes
[2025-10-10 12:15:21] 2025-10-10 19:14:48,243 | INFO     | will attempt to kill all subprocesses of pid=878077
[2025-10-10 12:15:21] 2025-10-10 19:14:48,738 | INFO     | process IDs to be killed: [878077] (in reverse order)
[2025-10-10 12:15:21] 2025-10-10 19:14:48,891 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 12:15:21] 2025-10-10 19:14:48,891 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 12:15:21] 2025-10-10 19:14:48,908 | INFO     | did not find any defunct processes belonging to 878077
[2025-10-10 12:15:21] 2025-10-10 19:14:48,931 | INFO     | did not find any defunct processes belonging to 878077
[2025-10-10 12:15:21] 2025-10-10 19:14:48,931 | INFO     | ready for new job
[2025-10-10 12:15:21] 2025-10-10 19:14:48,931 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 12:15:21] 2025-10-10 19:14:48,932 | INFO     | ***************************************
[2025-10-10 12:15:21] 2025-10-10 19:14:48,932 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 12:15:21] 2025-10-10 19:14:48,933 | INFO     | ***************************************
[2025-10-10 12:15:21] 2025-10-10 19:14:48,933 | INFO     | 
[2025-10-10 12:15:21] 2025-10-10 19:14:48,935 | INFO     | architecture information:
[2025-10-10 12:15:21] 2025-10-10 19:14:48,935 | INFO     | executing command: cat /etc/os-release
[2025-10-10 12:15:21] 2025-10-10 19:14:48,957 | INFO     | cat /etc/os-release:
[2025-10-10 12:15:21] NAME="CentOS Linux"
[2025-10-10 12:15:21] VERSION="7 (Core)"
[2025-10-10 12:15:21] ID="centos"
[2025-10-10 12:15:21] ID_LIKE="rhel fedora"
[2025-10-10 12:15:21] VERSION_ID="7"
[2025-10-10 12:15:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 12:15:21] ANSI_COLOR="0;31"
[2025-10-10 12:15:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 12:15:21] HOME_URL="https://www.centos.org/"
[2025-10-10 12:15:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 12:15:21] 
[2025-10-10 12:15:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 12:15:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 12:15:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 12:15:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 12:15:21] 
[2025-10-10 12:15:21] 2025-10-10 19:14:48,958 | INFO     | ***************************************
[2025-10-10 12:15:21] 2025-10-10 19:14:49,472 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-10 12:15:21] 2025-10-10 19:14:49,534 | INFO     | sufficient remaining disk space (1290610409472 B)
[2025-10-10 12:15:21] 2025-10-10 19:14:49,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 12:15:21] 2025-10-10 19:14:49,535 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 12:15:21] 2025-10-10 19:14:49,535 | INFO     | update_server=False
[2025-10-10 12:15:21] 2025-10-10 19:14:49,550 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 12:15:21] 2025-10-10 19:14:49,550 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 12:15:21] 2025-10-10 19:14:49,848 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 12:15:21] 2025-10-10 19:14:49,848 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 12:15:21] 2025-10-10 19:14:49,848 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:15:21] 2025-10-10 19:14:49,848 | INFO     | will abort loop
[2025-10-10 12:15:21] 2025-10-10 19:14:50,001 | INFO     | all data control threads have been joined
[2025-10-10 12:15:21] 2025-10-10 19:14:50,311 | INFO     | all job control threads have been joined
[2025-10-10 12:15:21] 2025-10-10 19:14:50,556 | INFO     | [job] retrieve thread has finished
[2025-10-10 12:15:21] 2025-10-10 19:14:50,688 | INFO     | [job] validate thread has finished
[2025-10-10 12:15:21] 2025-10-10 19:14:50,859 | INFO     | [job] job monitor thread has finished
[2025-10-10 12:15:21] 2025-10-10 19:14:51,007 | INFO     | [data] control thread has finished
[2025-10-10 12:15:21] 2025-10-10 19:14:51,042 | INFO     | all payload control threads have been joined
[2025-10-10 12:15:21] 2025-10-10 19:14:51,193 | INFO     | [data] copytool_in thread has finished
[2025-10-10 12:15:21] 2025-10-10 19:14:51,318 | INFO     | [job] control thread has finished
[2025-10-10 12:15:21] 2025-10-10 19:14:51,355 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 12:15:21] 2025-10-10 19:14:51,377 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 12:15:21] 2025-10-10 19:14:51,556 | INFO     | [data] copytool_out thread has finished
[2025-10-10 12:15:21] 2025-10-10 19:14:51,628 | INFO     | [payload] failed_post thread has finished
[2025-10-10 12:15:21] 2025-10-10 19:14:51,959 | INFO     | [payload] validate_post thread has finished
[2025-10-10 12:15:21] 2025-10-10 19:14:51,970 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 12:15:21] 2025-10-10 19:14:52,021 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 12:15:21] 2025-10-10 19:14:52,054 | INFO     | [payload] control thread has finished
[2025-10-10 12:15:21] 2025-10-10 19:14:52,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:15:21] 2025-10-10 19:14:52,355 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 12:15:21] 2025-10-10 19:14:53,216 | INFO     | [job] queue monitor thread has finished
[2025-10-10 12:15:21] 2025-10-10 19:14:56,374 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 12:15:21] 2025-10-10 19:15:05,228 | INFO     | [monitor] cgroup control has ended
[2025-10-10 12:15:21] 2025-10-10 19:15:06,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140562403743552)>', '<ExcThread(monitor, started 140561705060096)>']
[2025-10-10 12:15:21] 2025-10-10 19:15:11,271 | INFO     | all workflow threads have been joined
[2025-10-10 12:15:21] 2025-10-10 19:15:11,271 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 12:15:21] 2025-10-10 19:15:11,272 | INFO     | traces error code: 0
[2025-10-10 12:15:21] 2025-10-10 19:15:11,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 12:15:21] 2025-10-10 19:15:20,152 | INFO     | PID=871140 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 12:15:21] 2025-10-10 19:15:20,152 | INFO     | .. there are 26 such processes running
[2025-10-10 12:15:21] 2025-10-10 19:15:20,153 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 12:15:21] 2025-10-10 19:15:20,153 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 12:15:21] 2025-10-10 19:15:20,153 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 12:15:21] 2025-10-10 19:15:20,153 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 12:15:21] 2025-10-10 19:15:20,153 | INFO     | [monitor] control thread has ended
[2025-10-10 12:15:21] 2025-10-10 19:15:20,598 [wrapper] ==== pilot stdout END ====
[2025-10-10 12:15:21] 2025-10-10 19:15:20,604 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 12:15:21] 2025-10-10 19:15:20,619 [wrapper] pilotpid: 871140
[2025-10-10 12:15:21] 2025-10-10 19:15:20,636 [wrapper] Pilot exit status: 0
[2025-10-10 12:15:21] 2025-10-10 19:15:20,678 [wrapper] pandaids: 6837669450
[2025-10-10 12:15:21] 2025-10-10 19:15:20,805 [wrapper] cleanup supervisor_pilot  871146 871141
[2025-10-10 12:15:21] 2025-10-10 19:15:20,809 [wrapper] Test setup, not cleaning
[2025-10-10 12:15:21] 2025-10-10 19:15:20,816 [wrapper] apfmon messages muted
[2025-10-10 12:15:21] 2025-10-10 19:15:20,821 [wrapper] ==== wrapper stdout END ====
[2025-10-10 12:15:21] 2025-10-10 19:15:20,825 [wrapper] ==== wrapper stderr END ====
[2025-10-10 12:15:21]  *** Error codes and diagnostics ***
[2025-10-10 12:15:21]     "exeErrorCode": 65,
[2025-10-10 12:15:21]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 12:15:21]     "pilotErrorCode": 1305,
[2025-10-10 12:15:21]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 12:15:21]  *** Listing of results directory ***
[2025-10-10 12:15:21] total 219276
[2025-10-10 12:15:21] -rwx------. 1 boinc boinc     36292 Oct 10 09:45 runpilot2-wrapper.sh
[2025-10-10 12:15:21] -rw-r--r--. 1 boinc boinc    557409 Oct 10 09:45 pilot3.tar.gz
[2025-10-10 12:15:21] -rw-r--r--. 1 boinc boinc      5112 Oct 10 09:45 queuedata.json
[2025-10-10 12:15:21] -rw-r--r--. 1 boinc boinc       100 Oct 10 12:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 12:15:21] -rwxr-xr-x. 1 boinc boinc      7986 Oct 10 12:08 run_atlas
[2025-10-10 12:15:21] -rw-r--r--. 1 boinc boinc       105 Oct 10 12:08 job.xml
[2025-10-10 12:15:21] -rw-r--r--. 2 boinc boinc 220387235 Oct 10 12:08 EVNT.46676267._001692.pool.root.1
[2025-10-10 12:15:21] -rw-r--r--. 1 boinc boinc      6444 Oct 10 12:08 init_data.xml
[2025-10-10 12:15:21] -rw-r--r--. 2 boinc boinc     15120 Oct 10 12:08 start_atlas.sh
[2025-10-10 12:15:21] drwxrwx--x. 2 boinc boinc      4096 Oct 10 12:08 shared
[2025-10-10 12:15:21] -rw-r--r--. 2 boinc boinc    569677 Oct 10 12:08 input.tar.gz
[2025-10-10 12:15:21] -rw-r--r--. 1 boinc boinc         0 Oct 10 12:08 boinc_lockfile
[2025-10-10 12:15:21] -rw-r--r--. 1 boinc boinc      2550 Oct 10 12:08 pandaJob.out
[2025-10-10 12:15:21] -rw-------. 1 boinc boinc    975525 Oct 10 12:08 agis_schedconf.cvmfs.json
[2025-10-10 12:15:21] -rw-------. 1 boinc boinc   1560580 Oct 10 12:09 agis_ddmendpoints.agis.ALL.json
[2025-10-10 12:15:21] drwx------. 5 boinc boinc      4096 Oct 10 12:09 pilot3
[2025-10-10 12:15:21] -rw-r--r--. 1 boinc boinc       525 Oct 10 12:12 boinc_task_state.xml
[2025-10-10 12:15:21] -rw-------. 1 boinc boinc       991 Oct 10 12:12 memory_monitor_summary.json
[2025-10-10 12:15:21] -rw-------. 1 boinc boinc     22620 Oct 10 12:12 log.46676269._041745.job.log.tgz.1
[2025-10-10 12:15:21] -rw-------. 1 boinc boinc      8443 Oct 10 12:14 heartbeat.json
[2025-10-10 12:15:21] -rw-r--r--. 1 boinc boinc        23 Oct 10 12:15 wrapper_checkpoint.txt
[2025-10-10 12:15:21] -rw-r--r--. 1 boinc boinc      8192 Oct 10 12:15 boinc_mmap_file
[2025-10-10 12:15:21] -rw-------. 1 boinc boinc        95 Oct 10 12:15 pilot_heartbeat.json
[2025-10-10 12:15:21] -rw-------. 1 boinc boinc       822 Oct 10 12:15 pilotlog.txt
[2025-10-10 12:15:21] -rw-------. 1 boinc boinc    103309 Oct 10 12:15 log.46676269._041745.job.log.1
[2025-10-10 12:15:21] -rw-------. 1 boinc boinc       188 Oct 10 12:15 output.list
[2025-10-10 12:15:21] -rw-r--r--. 1 boinc boinc       620 Oct 10 12:15 runtime_log
[2025-10-10 12:15:21] -rw-------. 1 boinc boinc    143360 Oct 10 12:15 result.tar.gz
[2025-10-10 12:15:21] -rw-r--r--. 1 boinc boinc      8526 Oct 10 12:15 runtime_log.err
[2025-10-10 12:15:21] -rw-------. 1 boinc boinc       646 Oct 10 12:15 4y1NDmpQVR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmqGQMDmNbLWhm.diag
[2025-10-10 12:15:21] -rw-r--r--. 1 boinc boinc     21970 Oct 10 12:15 stderr.txt
[2025-10-10 12:15:21] No HITS result produced
[2025-10-10 12:15:21]  *** Contents of shared directory: ***
[2025-10-10 12:15:21] total 215944
[2025-10-10 12:15:21] -rw-r--r--. 2 boinc boinc 220387235 Oct 10 12:08 ATLAS.root_0
[2025-10-10 12:15:21] -rw-r--r--. 2 boinc boinc     15120 Oct 10 12:08 start_atlas.sh
[2025-10-10 12:15:21] -rw-r--r--. 2 boinc boinc    569677 Oct 10 12:08 input.tar.gz
[2025-10-10 12:15:21] -rw-------. 1 boinc boinc    143360 Oct 10 12:15 result.tar.gz
12:15:22 (867392): run_atlas exited; CPU time 31.938942
12:15:22 (867392): called boinc_finish(0)

</stderr_txt>
]]>

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