Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:08:41 (1685377): wrapper (7.7.26015): starting
15:08:41 (1685377): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 15:08:41] Arguments: --nthreads 8
[2025-10-10 15:08:41] Threads: 8
[2025-10-10 15:08:41] Checking for CVMFS
[2025-10-10 15:08:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 15:08:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 15:08:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 15:08:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 15:08:43] 2.13.2.0 8406 34026 119692 151558 1 690 30001841 40960001 29536 16776704 0 215662369 99.846 80771969 49372 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 15:08:43] CVMFS is ok
[2025-10-10 15:08:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 15:08:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 15:08:43] Further information can be found at the LHC@home message board.
[2025-10-10 15:08:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 15:08:43] Checking for apptainer binary...
[2025-10-10 15:08:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 15:08:43] Running /usr/bin/apptainer --version
[2025-10-10 15:08:43] apptainer version 1.4.3-1.el9
[2025-10-10 15:08:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 15:08:44] c-208-37.aglt2.org
[2025-10-10 15:08:44] apptainer works
[2025-10-10 15:08:44] Set ATHENA_PROC_NUMBER=8
[2025-10-10 15:08:44] Set ATHENA_CORE_NUMBER=8
[2025-10-10 15:08:44] Starting ATLAS job with PandaID=6837451373
[2025-10-10 15:08:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 16:55:16]  *** The last 200 lines of the pilot log: ***
[2025-10-10 16:55:16] 2025-10-10 20:54:40,474 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 16:55:16] 2025-10-10 20:54:40,480 | INFO     | fitting pss+swap vs Time
[2025-10-10 16:55:16] 2025-10-10 20:54:40,480 | INFO     | sum of square deviations: 319449071.96039516
[2025-10-10 16:55:16] 2025-10-10 20:54:40,480 | INFO     | sum of deviations: 27002808107.118813
[2025-10-10 16:55:16] 2025-10-10 20:54:40,480 | INFO     | mean x: 1760126571.019802
[2025-10-10 16:55:16] 2025-10-10 20:54:40,480 | INFO     | mean y: 2379206.9405940594
[2025-10-10 16:55:16] 2025-10-10 20:54:40,480 | INFO     | -- intersect: -148779896946.86603
[2025-10-10 16:55:16] 2025-10-10 20:54:40,480 | INFO     | intersect: -148779896946.86603
[2025-10-10 16:55:16] 2025-10-10 20:54:40,481 | INFO     | chi2: 5.2056771000358175
[2025-10-10 16:55:16] 2025-10-10 20:54:40,481 | INFO     | sum of square deviations: 274313951.9583326
[2025-10-10 16:55:16] 2025-10-10 20:54:40,481 | INFO     | sum of deviations: 32316211302.4375
[2025-10-10 16:55:16] 2025-10-10 20:54:40,481 | INFO     | mean x: 1760126418.5208333
[2025-10-10 16:55:16] 2025-10-10 20:54:40,481 | INFO     | mean y: 2396259.03125
[2025-10-10 16:55:16] 2025-10-10 20:54:40,481 | INFO     | -- intersect: -207353506909.03574
[2025-10-10 16:55:16] 2025-10-10 20:54:40,481 | INFO     | intersect: -207353506909.03574
[2025-10-10 16:55:16] 2025-10-10 20:54:40,481 | INFO     | chi2: 4.492903661172273
[2025-10-10 16:55:16] 2025-10-10 20:54:40,481 | INFO     | current chi2=4.492903661172273 (change=13.692233021111521 %)
[2025-10-10 16:55:16] 2025-10-10 20:54:40,481 | INFO     | right removable region: 95
[2025-10-10 16:55:16] 2025-10-10 20:54:40,481 | INFO     | sum of square deviations: 274312731.9583326
[2025-10-10 16:55:16] 2025-10-10 20:54:40,482 | INFO     | sum of deviations: -4483605355.791667
[2025-10-10 16:55:16] 2025-10-10 20:54:40,482 | INFO     | mean x: 1760126723.5208333
[2025-10-10 16:55:16] 2025-10-10 20:54:40,482 | INFO     | mean y: 2485301.3958333335
[2025-10-10 16:55:16] 2025-10-10 20:54:40,482 | INFO     | -- intersect: 28771524011.74187
[2025-10-10 16:55:16] 2025-10-10 20:54:40,482 | INFO     | intersect: 28771524011.74187
[2025-10-10 16:55:16] 2025-10-10 20:54:40,482 | INFO     | chi2: 0.9964545196084147
[2025-10-10 16:55:16] 2025-10-10 20:54:40,482 | INFO     | current chi2=0.9964545196084147 (change=80.85831102352547 %)
[2025-10-10 16:55:16] 2025-10-10 20:54:40,482 | INFO     | sum of square deviations: 233641591.95604375
[2025-10-10 16:55:16] 2025-10-10 20:54:40,486 | INFO     | sum of deviations: -9206534364.373627
[2025-10-10 16:55:16] 2025-10-10 20:54:40,486 | INFO     | mean x: 1760126876.0219781
[2025-10-10 16:55:16] 2025-10-10 20:54:40,486 | INFO     | mean y: 2502525.186813187
[2025-10-10 16:55:16] 2025-10-10 20:54:40,486 | INFO     | -- intersect: 69359454059.75182
[2025-10-10 16:55:16] 2025-10-10 20:54:40,486 | INFO     | intersect: 69359454059.75182
[2025-10-10 16:55:16] 2025-10-10 20:54:40,487 | INFO     | chi2: 0.819109786709024
[2025-10-10 16:55:16] 2025-10-10 20:54:40,487 | INFO     | current chi2=0.819109786709024 (change=17.797574240426282 %)
[2025-10-10 16:55:16] 2025-10-10 20:54:40,487 | INFO     | left removable region: 20
[2025-10-10 16:55:16] 2025-10-10 20:54:40,487 | INFO     | sum of square deviations: 130792663.9466669
[2025-10-10 16:55:16] 2025-10-10 20:54:40,487 | INFO     | sum of deviations: -2193597811.306667
[2025-10-10 16:55:16] 2025-10-10 20:54:40,487 | INFO     | mean x: 1760126998.0266666
[2025-10-10 16:55:16] 2025-10-10 20:54:40,487 | INFO     | mean y: 2527138.6533333333
[2025-10-10 16:55:16] 2025-10-10 20:54:40,487 | INFO     | -- intersect: 29522613464.500076
[2025-10-10 16:55:16] 2025-10-10 20:54:40,487 | INFO     | intersect: 29522613464.500076
[2025-10-10 16:55:16] 2025-10-10 20:54:40,487 | INFO     | chi2: 0.0026833411626665375
[2025-10-10 16:55:16] 2025-10-10 20:54:40,487 | INFO     | -- intersect: 29522613464.500076
[2025-10-10 16:55:16] 2025-10-10 20:54:40,487 | INFO     | current memory leak: -16.77 B/s (using 75 data points, chi2=0.00)
[2025-10-10 16:55:16] 2025-10-10 20:54:40,488 | INFO     | could have reported an average CPU frequency of 3703 MHz (7 samples)
[2025-10-10 16:55:16] 2025-10-10 20:54:40,488 | INFO     | ..............................
[2025-10-10 16:55:16] 2025-10-10 20:54:40,488 | INFO     | . Timing measurements:
[2025-10-10 16:55:16] 2025-10-10 20:54:40,488 | INFO     | . get job = 0 s
[2025-10-10 16:55:16] 2025-10-10 20:54:40,488 | INFO     | . initial setup = 5 s
[2025-10-10 16:55:16] 2025-10-10 20:54:40,488 | INFO     | . payload setup = 35 s
[2025-10-10 16:55:16] 2025-10-10 20:54:40,488 | INFO     | . stage-in = 0 s
[2025-10-10 16:55:16] 2025-10-10 20:54:40,488 | INFO     | . payload execution = 6148 s
[2025-10-10 16:55:16] 2025-10-10 20:54:40,488 | INFO     | . stage-out = 2 s
[2025-10-10 16:55:16] 2025-10-10 20:54:40,488 | INFO     | . log creation = 0 s
[2025-10-10 16:55:16] 2025-10-10 20:54:40,488 | INFO     | ..............................
[2025-10-10 16:55:16] 2025-10-10 20:54:40,519 | INFO     | sufficient remaining disk space (170362142720 B)
[2025-10-10 16:55:16] 2025-10-10 20:54:40,519 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-10 16:55:16] 2025-10-10 20:54:40,519 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6837451373: 3898517 B (within 2537553920 B limit)
[2025-10-10 16:55:16] 2025-10-10 20:54:40,520 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6837451373/HITS.46676269._033470.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-10 16:55:16] 2025-10-10 20:54:40,520 | INFO     | total size of present files: 0 B (workdir size: 3898517 B)
[2025-10-10 16:55:16] 2025-10-10 20:54:40,520 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6837451373/HITS.46676269._033470.pool.root.1 since it does not exist
[2025-10-10 16:55:16] 2025-10-10 20:54:40,935 | INFO     | 
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | job summary report
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | --------------------------------------------------
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | PanDA job id: 6837451373
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | task id: 46676269
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | errors: (none)
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | pilot state: finished 
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | transexitcode: 0
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | exeerrorcode: 0
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | exeerrordiag: 
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | exitcode: 0
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | exitmsg: OK
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | cpuconsumptiontime: 23352 s
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | nevents: 400
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | neventsw: 0
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | pid: 1733953
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | pgrp: 1733953
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | corecount: 8
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | event service: False
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | sizes: {0: 2348029, 1: 2348885, 2: 2348885, 13: 2348913, 23: 2348969, 28: 2349259, 34: 2349415, 6188: 2376442, 6190: 2385440, 6191: 2385496, 6224: 2385718}
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | --------------------------------------------------
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | 
[2025-10-10 16:55:16] 2025-10-10 20:54:40,982 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 16:55:16] 2025-10-10 20:54:41,074 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 16:55:16] 2025-10-10 20:54:41,074 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 16:55:16] 2025-10-10 20:54:41,074 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 16:55:16] 2025-10-10 20:54:41,074 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 16:55:16] 2025-10-10 20:54:41,074 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 16:55:16] 2025-10-10 20:54:41,074 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 16:55:16] 2025-10-10 20:54:41,074 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 16:55:16] 2025-10-10 20:54:41,074 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 16:55:16] 2025-10-10 20:54:41,074 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 16:55:16] 2025-10-10 20:54:41,074 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 16:55:16] 2025-10-10 20:54:41,074 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 16:55:16] 2025-10-10 20:54:41,075 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 16:55:16] 2025-10-10 20:54:41,075 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 16:55:16] 2025-10-10 20:54:41,075 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 16:55:16] 2025-10-10 20:54:41,075 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 16:55:16] 2025-10-10 20:54:41,075 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 16:55:16] 2025-10-10 20:54:41,075 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 16:55:16] 2025-10-10 20:54:41,075 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 16:55:16] 2025-10-10 20:54:41,075 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 16:55:16] 2025-10-10 20:54:41,132 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 16:55:16] 2025-10-10 20:54:41,133 | INFO     | job 6837451373 has completed (purged errors)
[2025-10-10 16:55:16] 2025-10-10 20:54:41,133 | INFO     | overall cleanup function is called
[2025-10-10 16:55:16] 2025-10-10 20:54:41,552 | INFO     | number of running child processes to parent process 1733953: 1
[2025-10-10 16:55:16] 2025-10-10 20:54:41,553 | INFO     | maximum number of monitored processes: 7
[2025-10-10 16:55:16] 2025-10-10 20:54:41,553 | INFO     | aborting job monitoring since job object (job id=6837451373) has expired
[2025-10-10 16:55:16] 2025-10-10 20:54:42,162 | INFO     | --- collectZombieJob: --- 10, [1733953]
[2025-10-10 16:55:16] 2025-10-10 20:54:42,162 | INFO     | zombie collector waiting for pid 1733953
[2025-10-10 16:55:16] 2025-10-10 20:54:42,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 16:55:16] 2025-10-10 20:54:42,163 | INFO     | collected zombie processes
[2025-10-10 16:55:16] 2025-10-10 20:54:42,163 | INFO     | will attempt to kill all subprocesses of pid=1733953
[2025-10-10 16:55:16] 2025-10-10 20:54:42,503 [wrapper] supervise_pilot (15 min periods counter: 8)
[2025-10-10 16:55:16] 2025-10-10 20:54:43,318 | INFO     | process IDs to be killed: [1733953] (in reverse order)
[2025-10-10 16:55:16] 2025-10-10 20:54:43,717 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 16:55:16] 2025-10-10 20:54:43,717 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 16:55:16] 2025-10-10 20:54:43,763 | INFO     | did not find any defunct processes belonging to 1733953
[2025-10-10 16:55:16] 2025-10-10 20:54:43,782 | INFO     | did not find any defunct processes belonging to 1733953
[2025-10-10 16:55:16] 2025-10-10 20:54:43,783 | INFO     | ready for new job
[2025-10-10 16:55:16] 2025-10-10 20:54:43,783 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 16:55:16] 2025-10-10 20:54:43,784 | INFO     | ***************************************
[2025-10-10 16:55:16] 2025-10-10 20:54:43,785 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 16:55:16] 2025-10-10 20:54:43,785 | INFO     | ***************************************
[2025-10-10 16:55:16] 2025-10-10 20:54:43,785 | INFO     | 
[2025-10-10 16:55:16] 2025-10-10 20:54:43,794 | INFO     | architecture information:
[2025-10-10 16:55:16] 2025-10-10 20:54:43,795 | INFO     | executing command: cat /etc/os-release
[2025-10-10 16:55:16] 2025-10-10 20:54:43,866 | INFO     | cat /etc/os-release:
[2025-10-10 16:55:16] NAME="CentOS Linux"
[2025-10-10 16:55:16] VERSION="7 (Core)"
[2025-10-10 16:55:16] ID="centos"
[2025-10-10 16:55:16] ID_LIKE="rhel fedora"
[2025-10-10 16:55:16] VERSION_ID="7"
[2025-10-10 16:55:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 16:55:16] ANSI_COLOR="0;31"
[2025-10-10 16:55:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 16:55:16] HOME_URL="https://www.centos.org/"
[2025-10-10 16:55:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 16:55:16] 
[2025-10-10 16:55:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 16:55:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 16:55:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 16:55:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 16:55:16] 
[2025-10-10 16:55:16] 2025-10-10 20:54:43,867 | INFO     | ***************************************
[2025-10-10 16:55:16] 2025-10-10 20:54:44,370 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 16:55:16] 2025-10-10 20:54:44,439 | INFO     | sufficient remaining disk space (170367385600 B)
[2025-10-10 16:55:16] 2025-10-10 20:54:44,440 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 16:55:16] 2025-10-10 20:54:44,441 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 16:55:16] 2025-10-10 20:54:44,441 | INFO     | update_server=False
[2025-10-10 16:55:16] 2025-10-10 20:54:44,441 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 16:55:16] 2025-10-10 20:54:44,538 | INFO     | all job control threads have been joined
[2025-10-10 16:55:16] 2025-10-10 20:54:45,082 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 16:55:16] 2025-10-10 20:54:45,082 | INFO     | aborting loop
[2025-10-10 16:55:16] 2025-10-10 20:54:45,244 | INFO     | all data control threads have been joined
[2025-10-10 16:55:16] 2025-10-10 20:54:45,455 | INFO     | [job] retrieve thread has finished
[2025-10-10 16:55:16] 2025-10-10 20:54:45,544 | INFO     | [job] control thread has finished
[2025-10-10 16:55:16] 2025-10-10 20:54:45,606 | INFO     | all payload control threads have been joined
[2025-10-10 16:55:16] 2025-10-10 20:54:45,638 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 16:55:16] 2025-10-10 20:54:45,639 | INFO     | [job] validate thread has finished
[2025-10-10 16:55:16] 2025-10-10 20:54:45,699 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 16:55:16] 2025-10-10 20:54:45,715 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 16:55:16] 2025-10-10 20:54:45,803 | INFO     | [data] copytool_in thread has finished
[2025-10-10 16:55:16] 2025-10-10 20:54:46,005 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 16:55:16] 2025-10-10 20:54:46,028 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 16:55:16] 2025-10-10 20:54:46,032 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 16:55:16] 2025-10-10 20:54:46,065 | INFO     | [payload] failed_post thread has finished
[2025-10-10 16:55:16] 2025-10-10 20:54:46,094 | INFO     | [job] job monitor thread has finished
[2025-10-10 16:55:16] 2025-10-10 20:54:46,250 | INFO     | [data] control thread has finished
[2025-10-10 16:55:16] 2025-10-10 20:54:46,612 | INFO     | [payload] control thread has finished
[2025-10-10 16:55:16] 2025-10-10 20:54:46,637 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 16:55:16] 2025-10-10 20:54:46,705 | INFO     | [job] queue monitor thread has finished
[2025-10-10 16:55:16] 2025-10-10 20:54:46,706 | INFO     | [payload] validate_post thread has finished
[2025-10-10 16:55:16] 2025-10-10 20:54:47,722 | INFO     | [data] copytool_out thread has finished
[2025-10-10 16:55:16] 2025-10-10 20:54:50,014 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 16:55:16] 2025-10-10 20:55:02,223 | INFO     | [monitor] cgroup control has ended
[2025-10-10 16:55:16] 2025-10-10 20:55:02,852 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140093986584384)>', '<ExcThread(monitor, started 140093469730560)>']
[2025-10-10 16:55:16] 2025-10-10 20:55:07,878 | INFO     | all workflow threads have been joined
[2025-10-10 16:55:16] 2025-10-10 20:55:07,878 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 16:55:16] 2025-10-10 20:55:07,879 | INFO     | traces error code: 0
[2025-10-10 16:55:16] 2025-10-10 20:55:07,879 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 16:55:16] 2025-10-10 20:55:13,696 | INFO     | PID=1701056 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 16:55:16] 2025-10-10 20:55:13,702 | INFO     | .. there are 22 such processes running
[2025-10-10 16:55:16] 2025-10-10 20:55:13,703 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 16:55:16] 2025-10-10 20:55:13,703 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 16:55:16] 2025-10-10 20:55:13,703 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 16:55:16] 2025-10-10 20:55:13,703 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 16:55:16] 2025-10-10 20:55:13,703 | INFO     | [monitor] control thread has ended
[2025-10-10 16:55:16] 2025-10-10 20:55:14,930 [wrapper] ==== pilot stdout END ====
[2025-10-10 16:55:16] 2025-10-10 20:55:14,951 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 16:55:16] 2025-10-10 20:55:14,978 [wrapper] pilotpid: 1701056
[2025-10-10 16:55:16] 2025-10-10 20:55:14,992 [wrapper] Pilot exit status: 0
[2025-10-10 16:55:16] 2025-10-10 20:55:15,110 [wrapper] pandaids: 6837451373
[2025-10-10 16:55:16] 2025-10-10 20:55:15,473 [wrapper] cleanup supervisor_pilot 2063257 1701057
[2025-10-10 16:55:16] 2025-10-10 20:55:15,485 [wrapper] Test setup, not cleaning
[2025-10-10 16:55:16] 2025-10-10 20:55:15,502 [wrapper] apfmon messages muted
[2025-10-10 16:55:16] 2025-10-10 20:55:15,517 [wrapper] ==== wrapper stdout END ====
[2025-10-10 16:55:16] 2025-10-10 20:55:15,534 [wrapper] ==== wrapper stderr END ====
[2025-10-10 16:55:16]  *** Error codes and diagnostics ***
[2025-10-10 16:55:16]     "exeErrorCode": 0,
[2025-10-10 16:55:16]     "exeErrorDiag": "",
[2025-10-10 16:55:16]     "pilotErrorCode": 0,
[2025-10-10 16:55:16]     "pilotErrorDiag": "",
[2025-10-10 16:55:16]  *** Listing of results directory ***
[2025-10-10 16:55:16] total 409272
[2025-10-10 16:55:16] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 02:01 pilot3.tar.gz
[2025-10-10 16:55:16] -rwx------. 1 boincer umatlas     36292 Oct 10 02:03 runpilot2-wrapper.sh
[2025-10-10 16:55:16] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 02:03 queuedata.json
[2025-10-10 16:55:16] -rw-r--r--. 1 boincer umatlas       100 Oct 10 15:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 16:55:16] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 15:08 run_atlas
[2025-10-10 16:55:16] -rw-r--r--. 1 boincer umatlas       105 Oct 10 15:08 job.xml
[2025-10-10 16:55:16] -rw-r--r--. 2 boincer umatlas 221236479 Oct 10 15:08 EVNT.46676267._001362.pool.root.1
[2025-10-10 16:55:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 15:08 start_atlas.sh
[2025-10-10 16:55:16] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 15:08 shared
[2025-10-10 16:55:16] -rw-r--r--. 2 boincer umatlas    569680 Oct 10 15:08 input.tar.gz
[2025-10-10 16:55:16] -rw-r--r--. 1 boincer umatlas         0 Oct 10 15:08 boinc_lockfile
[2025-10-10 16:55:16] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 15:08 pandaJob.out
[2025-10-10 16:55:16] -rw-------. 1 boincer umatlas    975525 Oct 10 15:09 agis_schedconf.cvmfs.json
[2025-10-10 16:55:16] -rw-------. 1 boincer umatlas   1560580 Oct 10 15:09 agis_ddmendpoints.agis.ALL.json
[2025-10-10 16:55:16] drwx------. 5 boincer umatlas      4096 Oct 10 15:09 pilot3
[2025-10-10 16:55:16] -rw-------. 1 boincer umatlas 191577452 Oct 10 16:53 HITS.46676269._033470.pool.root.1
[2025-10-10 16:55:16] -rw-r--r--. 1 boincer umatlas       529 Oct 10 16:53 boinc_task_state.xml
[2025-10-10 16:55:16] -rw-------. 1 boincer umatlas      1049 Oct 10 16:54 memory_monitor_summary.json
[2025-10-10 16:55:16] -rw-------. 1 boincer umatlas    357371 Oct 10 16:54 log.46676269._033470.job.log.tgz.1
[2025-10-10 16:55:16] -rw-r--r--. 1 boincer umatlas      7174 Oct 10 16:54 init_data.xml
[2025-10-10 16:55:16] -rw-------. 1 boincer umatlas      7814 Oct 10 16:54 heartbeat.json
[2025-10-10 16:55:16] -rw-------. 1 boincer umatlas        95 Oct 10 16:55 pilot_heartbeat.json
[2025-10-10 16:55:16] -rw-------. 1 boincer umatlas       823 Oct 10 16:55 pilotlog.txt
[2025-10-10 16:55:16] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 16:55 boinc_mmap_file
[2025-10-10 16:55:16] -rw-------. 1 boincer umatlas    842681 Oct 10 16:55 log.46676269._033470.job.log.1
[2025-10-10 16:55:16] -rw-r--r--. 1 boincer umatlas        27 Oct 10 16:55 wrapper_checkpoint.txt
[2025-10-10 16:55:16] -rw-------. 1 boincer umatlas       357 Oct 10 16:55 output.list
[2025-10-10 16:55:16] -rw-r--r--. 1 boincer umatlas       620 Oct 10 16:55 runtime_log
[2025-10-10 16:55:16] -rw-------. 1 boincer umatlas   1218560 Oct 10 16:55 result.tar.gz
[2025-10-10 16:55:16] -rw-------. 1 boincer umatlas       657 Oct 10 16:55 VRvMDm3OLR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOXcNDmQ3eTQo.diag
[2025-10-10 16:55:16] -rw-r--r--. 1 boincer umatlas      8703 Oct 10 16:55 runtime_log.err
[2025-10-10 16:55:16] -rw-r--r--. 1 boincer umatlas      4175 Oct 10 16:55 stderr.txt
[2025-10-10 16:55:16] HITS file was successfully produced:
[2025-10-10 16:55:16] -rw-------. 1 boincer umatlas 191577452 Oct 10 16:53 shared/HITS.pool.root.1
[2025-10-10 16:55:16]  *** Contents of shared directory: ***
[2025-10-10 16:55:16] total 404912
[2025-10-10 16:55:16] -rw-r--r--. 2 boincer umatlas 221236479 Oct 10 15:08 ATLAS.root_0
[2025-10-10 16:55:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 15:08 start_atlas.sh
[2025-10-10 16:55:16] -rw-r--r--. 2 boincer umatlas    569680 Oct 10 15:08 input.tar.gz
[2025-10-10 16:55:16] -rw-------. 1 boincer umatlas 191577452 Oct 10 16:53 HITS.pool.root.1
[2025-10-10 16:55:16] -rw-------. 1 boincer umatlas   1218560 Oct 10 16:55 result.tar.gz
16:55:17 (1685377): run_atlas exited; CPU time 23524.927825
16:55:17 (1685377): called boinc_finish(0)

</stderr_txt>
]]>

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