Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
22:14:55 (1113243): wrapper (7.7.26015): starting
22:14:55 (1113243): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 22:14:55] Arguments: --nthreads 12
[2025-10-10 22:14:55] Threads: 12
[2025-10-10 22:14:55] Checking for CVMFS
[2025-10-10 22:14:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 22:14:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 22:14:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 22:14:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 22:14:56] 2.13.2.0 2625769 1540 51844 151564 3 186 4082284 4096000 804 130560 4 7534671 99.998 56035 200 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-10 22:14:56] CVMFS is ok
[2025-10-10 22:14:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 22:14:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 22:14:56] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-10 22:14:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-10 22:14:56] Further information can be found at the LHC@home message board.
[2025-10-10 22:14:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 22:14:56] Checking for apptainer binary...
[2025-10-10 22:14:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 22:14:56] Running /usr/bin/apptainer --version
[2025-10-10 22:14:56] apptainer version 1.4.3
[2025-10-10 22:14:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 22:14:56] test-run
[2025-10-10 22:14:56] apptainer works
[2025-10-10 22:14:56] Set ATHENA_PROC_NUMBER=12
[2025-10-10 22:14:56] Set ATHENA_CORE_NUMBER=12
[2025-10-10 22:14:56] Starting ATLAS job with PandaID=6837508531
[2025-10-10 22:14:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 22:39:13]  *** The last 200 lines of the pilot log: ***
[2025-10-10 22:39:13]  replicas=None
[2025-10-10 22:39:13]  scope=mc23_13p6TeV
[2025-10-10 22:39:13]  status=None
[2025-10-10 22:39:13]  status_code=0
[2025-10-10 22:39:13]  storage_token=
[2025-10-10 22:39:13]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6837508531/log.46676269._034402.job.log.tgz.1
[2025-10-10 22:39:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/cd/log.46676269._034402.job.log.tgz.1
[2025-10-10 22:39:13]  workdir=None
[2025-10-10 22:39:13] ]
[2025-10-10 22:39:13] 2025-10-10 22:38:37,511 | INFO     | transferring file log.46676269._034402.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6837508531/log.46676269._034402.job.log.tgz.1 to /var/lib/boinc
[2025-10-10 22:39:13] 2025-10-10 22:38:37,511 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6837508531/log.46676269._034402.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.466762
[2025-10-10 22:39:13] 2025-10-10 22:38:37,516 | INFO     | adding to output.list: log.46676269._034402.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/cd/log.46676269._034402.job.log.tg
[2025-10-10 22:39:13] 2025-10-10 22:38:37,517 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 22:39:13] 2025-10-10 22:38:37,517 | INFO     | summary of transferred files:
[2025-10-10 22:39:13] 2025-10-10 22:38:37,517 | INFO     |  -- lfn=log.46676269._034402.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 22:39:13] 2025-10-10 22:38:37,517 | INFO     | stage-out finished correctly
[2025-10-10 22:39:13] 2025-10-10 22:38:37,873 | INFO     | time since job start (1418s) is within the limit (172800.0s)
[2025-10-10 22:39:13] 2025-10-10 22:38:39,878 | INFO     | time since job start (1420s) is within the limit (172800.0s)
[2025-10-10 22:39:13] 2025-10-10 22:38:40,308 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 22:39:13] 2025-10-10 22:38:40,324 | INFO     | job 6837508531 has state=finished
[2025-10-10 22:39:13] 2025-10-10 22:38:40,324 | INFO     | preparing for final server update for job 6837508531 in state='finished'
[2025-10-10 22:39:13] 2025-10-10 22:38:40,692 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-10 22:39:13] 2025-10-10 22:38:40,692 | INFO     | this job has now completed (state=finished)
[2025-10-10 22:39:13] 2025-10-10 22:38:40,692 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 22:39:13] 2025-10-10 22:38:40,692 | INFO     | log transfer has been attempted: DONE
[2025-10-10 22:39:13] 2025-10-10 22:38:40,692 | INFO     | job 6837508531 has finished - writing final server update
[2025-10-10 22:39:13] 2025-10-10 22:38:40,692 | INFO     | total number of processed events: 400 (read)
[2025-10-10 22:39:13] 2025-10-10 22:38:40,693 | INFO     | executing command: lscpu
[2025-10-10 22:39:13] 2025-10-10 22:38:40,699 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 22:39:13] 2025-10-10 22:38:41,477 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 22:39:13] 2025-10-10 22:38:41,478 | INFO     | found 32 cores (32 cores per socket, 1 socket) , CPU MHz: 4299.979999999998
[2025-10-10 22:39:13] 2025-10-10 22:38:41,479 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6837508531/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 22:39:13] 2025-10-10 22:38:41,479 | INFO     | extracted standard info from prmon json
[2025-10-10 22:39:13] 2025-10-10 22:38:41,479 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 22:39:13] 2025-10-10 22:38:41,479 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 22:39:13] 2025-10-10 22:38:41,479 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 22:39:13] 2025-10-10 22:38:41,479 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 22:39:13] 2025-10-10 22:38:41,479 | INFO     | fitting pss+swap vs Time
[2025-10-10 22:39:13] 2025-10-10 22:38:41,479 | INFO     | sum of square deviations: 1265140.0
[2025-10-10 22:39:13] 2025-10-10 22:38:41,479 | INFO     | sum of deviations: 116172731.0
[2025-10-10 22:39:13] 2025-10-10 22:38:41,479 | INFO     | mean x: 1760135276.5
[2025-10-10 22:39:13] 2025-10-10 22:38:41,479 | INFO     | mean y: 2881907.625
[2025-10-10 22:39:13] 2025-10-10 22:38:41,480 | INFO     | -- intersect: -161623279624.25696
[2025-10-10 22:39:13] 2025-10-10 22:38:41,480 | INFO     | intersect: -161623279624.25696
[2025-10-10 22:39:13] 2025-10-10 22:38:41,480 | INFO     | chi2: 0.0012144560845240404
[2025-10-10 22:39:13] 2025-10-10 22:38:41,480 | INFO     | -- intersect: -161623279624.25696
[2025-10-10 22:39:13] 2025-10-10 22:38:41,480 | INFO     | current memory leak: 91.83 B/s (using 16 data points, chi2=0.00)
[2025-10-10 22:39:13] 2025-10-10 22:38:41,480 | INFO     | could have reported an average CPU frequency of 4299 MHz (4 samples)
[2025-10-10 22:39:13] 2025-10-10 22:38:41,480 | INFO     | ..............................
[2025-10-10 22:39:13] 2025-10-10 22:38:41,480 | INFO     | . Timing measurements:
[2025-10-10 22:39:13] 2025-10-10 22:38:41,480 | INFO     | . get job = 0 s
[2025-10-10 22:39:13] 2025-10-10 22:38:41,480 | INFO     | . initial setup = 2 s
[2025-10-10 22:39:13] 2025-10-10 22:38:41,480 | INFO     | . payload setup = 1 s
[2025-10-10 22:39:13] 2025-10-10 22:38:41,480 | INFO     | . stage-in = 0 s
[2025-10-10 22:39:13] 2025-10-10 22:38:41,480 | INFO     | . payload execution = 1401 s
[2025-10-10 22:39:13] 2025-10-10 22:38:41,480 | INFO     | . stage-out = 0 s
[2025-10-10 22:39:13] 2025-10-10 22:38:41,480 | INFO     | . log creation = 0 s
[2025-10-10 22:39:13] 2025-10-10 22:38:41,480 | INFO     | ..............................
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | 
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | job summary report
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | --------------------------------------------------
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | PanDA job id: 6837508531
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | task id: 46676269
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | errors: (none)
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | pilot state: finished 
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | transexitcode: 0
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | exeerrorcode: 0
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | exeerrordiag: 
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | exitcode: 0
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | exitmsg: OK
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | cpuconsumptiontime: 12881 s
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | nevents: 400
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | neventsw: 0
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | pid: 1123741
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | pgrp: 1123741
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | corecount: 12
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | event service: False
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | sizes: {0: 2348029, 1: 2349154, 11: 2349154, 1406: 2382936, 1409: 2382936, 1410: 2383130}
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | --------------------------------------------------
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | 
[2025-10-10 22:39:13] 2025-10-10 22:38:41,498 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-10 22:39:13] 2025-10-10 22:38:41,503 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 22:39:13] 2025-10-10 22:38:41,503 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 22:39:13] 2025-10-10 22:38:41,503 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 22:39:13] 2025-10-10 22:38:41,503 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 22:39:13] 2025-10-10 22:38:41,503 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 22:39:13] 2025-10-10 22:38:41,503 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 22:39:13] 2025-10-10 22:38:41,503 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 22:39:13] 2025-10-10 22:38:41,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 22:39:13] 2025-10-10 22:38:41,503 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 22:39:13] 2025-10-10 22:38:41,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 22:39:13] 2025-10-10 22:38:41,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 22:39:13] 2025-10-10 22:38:41,503 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 22:39:13] 2025-10-10 22:38:41,503 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 22:39:13] 2025-10-10 22:38:41,503 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 22:39:13] 2025-10-10 22:38:41,503 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 22:39:13] 2025-10-10 22:38:41,503 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 22:39:13] 2025-10-10 22:38:41,504 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 22:39:13] 2025-10-10 22:38:41,504 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 22:39:13] 2025-10-10 22:38:41,504 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 22:39:13] 2025-10-10 22:38:41,504 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 22:39:13] 2025-10-10 22:38:41,504 | INFO     | job 6837508531 has completed (purged errors)
[2025-10-10 22:39:13] 2025-10-10 22:38:41,504 | INFO     | overall cleanup function is called
[2025-10-10 22:39:13] 2025-10-10 22:38:42,509 | INFO     | --- collectZombieJob: --- 10, [1123741]
[2025-10-10 22:39:13] 2025-10-10 22:38:42,509 | INFO     | zombie collector waiting for pid 1123741
[2025-10-10 22:39:13] 2025-10-10 22:38:42,509 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 22:39:13] 2025-10-10 22:38:42,509 | INFO     | collected zombie processes
[2025-10-10 22:39:13] 2025-10-10 22:38:42,509 | INFO     | will attempt to kill all subprocesses of pid=1123741
[2025-10-10 22:39:13] 2025-10-10 22:38:42,523 | INFO     | process IDs to be killed: [1123741] (in reverse order)
[2025-10-10 22:39:13] 2025-10-10 22:38:42,533 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 22:39:13] 2025-10-10 22:38:42,533 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 22:39:13] 2025-10-10 22:38:42,533 | INFO     | did not find any defunct processes belonging to 1123741
[2025-10-10 22:39:13] 2025-10-10 22:38:42,534 | INFO     | did not find any defunct processes belonging to 1123741
[2025-10-10 22:39:13] 2025-10-10 22:38:42,534 | INFO     | ready for new job
[2025-10-10 22:39:13] 2025-10-10 22:38:42,534 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 22:39:13] 2025-10-10 22:38:42,534 | INFO     | ***************************************
[2025-10-10 22:39:13] 2025-10-10 22:38:42,534 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 22:39:13] 2025-10-10 22:38:42,534 | INFO     | ***************************************
[2025-10-10 22:39:13] 2025-10-10 22:38:42,534 | INFO     | 
[2025-10-10 22:39:13] 2025-10-10 22:38:42,534 | INFO     | pilot is running in a VM
[2025-10-10 22:39:13] 2025-10-10 22:38:42,534 | INFO     | architecture information:
[2025-10-10 22:39:13] 2025-10-10 22:38:42,535 | INFO     | executing command: cat /etc/os-release
[2025-10-10 22:39:13] 2025-10-10 22:38:42,537 | INFO     | cat /etc/os-release:
[2025-10-10 22:39:13] NAME="CentOS Linux"
[2025-10-10 22:39:13] VERSION="7 (Core)"
[2025-10-10 22:39:13] ID="centos"
[2025-10-10 22:39:13] ID_LIKE="rhel fedora"
[2025-10-10 22:39:13] VERSION_ID="7"
[2025-10-10 22:39:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 22:39:13] ANSI_COLOR="0;31"
[2025-10-10 22:39:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 22:39:13] HOME_URL="https://www.centos.org/"
[2025-10-10 22:39:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 22:39:13] 
[2025-10-10 22:39:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 22:39:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 22:39:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 22:39:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 22:39:13] 
[2025-10-10 22:39:13] 2025-10-10 22:38:42,537 | INFO     | ***************************************
[2025-10-10 22:39:13] 2025-10-10 22:38:43,040 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-10 22:39:13] 2025-10-10 22:38:43,046 | INFO     | sufficient remaining disk space (23709351936 B)
[2025-10-10 22:39:13] 2025-10-10 22:38:43,046 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 22:39:13] 2025-10-10 22:38:43,046 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 22:39:13] 2025-10-10 22:38:43,046 | INFO     | update_server=False
[2025-10-10 22:39:13] 2025-10-10 22:38:43,046 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 22:39:13] 2025-10-10 22:38:43,046 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 22:39:13] 2025-10-10 22:38:43,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 22:39:13] 2025-10-10 22:38:43,686 | WARNING  | process 1123741 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 22:39:13] 2025-10-10 22:38:43,696 | INFO     | using path: /var/lib/boinc-client/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 22:39:13] 2025-10-10 22:38:43,708 | INFO     | number of running child processes to parent process 1123741: 1
[2025-10-10 22:39:13] 2025-10-10 22:38:43,708 | INFO     | maximum number of monitored processes: 6
[2025-10-10 22:39:13] 2025-10-10 22:38:43,708 | INFO     | aborting job monitoring since job object (job id=6837508531) has expired
[2025-10-10 22:39:13] 2025-10-10 22:38:43,708 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 22:39:13] 2025-10-10 22:38:43,708 | INFO     | will abort loop
[2025-10-10 22:39:13] 2025-10-10 22:38:43,799 | INFO     | all payload control threads have been joined
[2025-10-10 22:39:13] 2025-10-10 22:38:44,019 | INFO     | all data control threads have been joined
[2025-10-10 22:39:13] 2025-10-10 22:38:44,051 | INFO     | [job] retrieve thread has finished
[2025-10-10 22:39:13] 2025-10-10 22:38:44,051 | INFO     | [job] queue monitor thread has finished
[2025-10-10 22:39:13] 2025-10-10 22:38:44,202 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 22:39:13] 2025-10-10 22:38:44,624 | INFO     | [payload] validate_post thread has finished
[2025-10-10 22:39:13] 2025-10-10 22:38:44,638 | INFO     | all job control threads have been joined
[2025-10-10 22:39:13] 2025-10-10 22:38:44,713 | INFO     | [job] job monitor thread has finished
[2025-10-10 22:39:13] 2025-10-10 22:38:44,799 | INFO     | [data] copytool_in thread has finished
[2025-10-10 22:39:13] 2025-10-10 22:38:44,804 | INFO     | [payload] control thread has finished
[2025-10-10 22:39:13] 2025-10-10 22:38:45,024 | INFO     | [data] control thread has finished
[2025-10-10 22:39:13] 2025-10-10 22:38:45,051 | INFO     | [data] copytool_out thread has finished
[2025-10-10 22:39:13] 2025-10-10 22:38:45,291 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 22:39:13] 2025-10-10 22:38:45,344 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 22:39:13] 2025-10-10 22:38:45,371 | INFO     | [job] validate thread has finished
[2025-10-10 22:39:13] 2025-10-10 22:38:45,632 | INFO     | [payload] failed_post thread has finished
[2025-10-10 22:39:13] 2025-10-10 22:38:45,643 | INFO     | [job] control thread has finished
[2025-10-10 22:39:13] 2025-10-10 22:38:46,330 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 22:39:13] 2025-10-10 22:38:50,337 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 22:39:13] 2025-10-10 22:38:53,859 | INFO     | job.realtimelogging is not enabled
[2025-10-10 22:39:13] 2025-10-10 22:38:54,864 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 22:39:13] 2025-10-10 22:39:01,214 | INFO     | [monitor] cgroup control has ended
[2025-10-10 22:39:13] 2025-10-10 22:39:01,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129554916157248)>', '<ExcThread(monitor, started 129554064602880)>']
[2025-10-10 22:39:13] 2025-10-10 22:39:06,613 | INFO     | all workflow threads have been joined
[2025-10-10 22:39:13] 2025-10-10 22:39:06,613 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 22:39:13] 2025-10-10 22:39:06,613 | INFO     | traces error code: 0
[2025-10-10 22:39:13] 2025-10-10 22:39:06,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 22:39:13] 2025-10-10 22:39:12,978 | INFO     | PID=1117093 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 22:39:13] 2025-10-10 22:39:12,978 | INFO     | .. there are 2 such processes running
[2025-10-10 22:39:13] 2025-10-10 22:39:12,978 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 22:39:13] 2025-10-10 22:39:12,978 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 22:39:13] 2025-10-10 22:39:12,978 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 22:39:13] 2025-10-10 22:39:12,978 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 22:39:13] 2025-10-10 22:39:12,978 | INFO     | [monitor] control thread has ended
[2025-10-10 22:39:13] 2025-10-10 22:39:13,003 [wrapper] ==== pilot stdout END ====
[2025-10-10 22:39:13] 2025-10-10 22:39:13,003 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 22:39:13] 2025-10-10 22:39:13,004 [wrapper] pilotpid: 1117093
[2025-10-10 22:39:13] 2025-10-10 22:39:13,005 [wrapper] Pilot exit status: 0
[2025-10-10 22:39:13] 2025-10-10 22:39:13,007 [wrapper] pandaids: 6837508531
[2025-10-10 22:39:13] 2025-10-10 22:39:13,018 [wrapper] cleanup supervisor_pilot 1130839 1117094
[2025-10-10 22:39:13] 2025-10-10 22:39:13,019 [wrapper] Test setup, not cleaning
[2025-10-10 22:39:13] 2025-10-10 22:39:13,019 [wrapper] apfmon messages muted
[2025-10-10 22:39:13] 2025-10-10 22:39:13,020 [wrapper] ==== wrapper stdout END ====
[2025-10-10 22:39:13] 2025-10-10 22:39:13,021 [wrapper] ==== wrapper stderr END ====
[2025-10-10 22:39:13]  *** Error codes and diagnostics ***
[2025-10-10 22:39:13]     "exeErrorCode": 0,
[2025-10-10 22:39:13]     "exeErrorDiag": "",
[2025-10-10 22:39:13]     "pilotErrorCode": 0,
[2025-10-10 22:39:13]     "pilotErrorDiag": "",
[2025-10-10 22:39:13]  *** Listing of results directory ***
[2025-10-10 22:39:13] total 410344
[2025-10-10 22:39:13] -rw-r--r-- 1 boinc boinc    557409 Oct 10 06:56 pilot3.tar.gz
[2025-10-10 22:39:13] -rw-r--r-- 1 boinc boinc      5112 Oct 10 07:04 queuedata.json
[2025-10-10 22:39:13] -rwx------ 1 boinc boinc     36292 Oct 10 07:05 runpilot2-wrapper.sh
[2025-10-10 22:39:13] -rw-r--r-- 1 boinc boinc       100 Oct 10 22:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 22:39:13] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 22:14 run_atlas
[2025-10-10 22:39:13] -rw-r--r-- 1 boinc boinc       105 Oct 10 22:14 job.xml
[2025-10-10 22:39:13] -rw-r--r-- 2 boinc boinc     15120 Oct 10 22:14 start_atlas.sh
[2025-10-10 22:39:13] drwxrwx--x 2 boinc boinc      4096 Oct 10 22:14 shared
[2025-10-10 22:39:13] -rw-r--r-- 2 boinc boinc    569685 Oct 10 22:14 input.tar.gz
[2025-10-10 22:39:13] -rw-r--r-- 1 boinc boinc      6938 Oct 10 22:14 init_data.xml
[2025-10-10 22:39:13] -rw-r--r-- 2 boinc boinc 220689749 Oct 10 22:14 EVNT.46676267._001399.pool.root.1
[2025-10-10 22:39:13] -rw-r--r-- 1 boinc boinc         0 Oct 10 22:14 boinc_lockfile
[2025-10-10 22:39:13] -rw-r--r-- 1 boinc boinc      2550 Oct 10 22:14 pandaJob.out
[2025-10-10 22:39:13] -rw------- 1 boinc boinc    975517 Oct 10 22:14 agis_schedconf.cvmfs.json
[2025-10-10 22:39:13] -rw------- 1 boinc boinc   1560580 Oct 10 22:14 agis_ddmendpoints.agis.ALL.json
[2025-10-10 22:39:13] drwx------ 5 boinc boinc      4096 Oct 10 22:14 pilot3
[2025-10-10 22:39:13] -rw------- 1 boinc boinc 194390107 Oct 10 22:38 HITS.46676269._034402.pool.root.1
[2025-10-10 22:39:13] -rw-r--r-- 1 boinc boinc       529 Oct 10 22:38 boinc_task_state.xml
[2025-10-10 22:39:13] -rw------- 1 boinc boinc      1017 Oct 10 22:38 memory_monitor_summary.json
[2025-10-10 22:39:13] -rw------- 1 boinc boinc    350501 Oct 10 22:38 log.46676269._034402.job.log.tgz.1
[2025-10-10 22:39:13] -rw------- 1 boinc boinc      7735 Oct 10 22:38 heartbeat.json
[2025-10-10 22:39:13] -rw-r--r-- 1 boinc boinc      8192 Oct 10 22:39 boinc_mmap_file
[2025-10-10 22:39:13] -rw-r--r-- 1 boinc boinc        27 Oct 10 22:39 wrapper_checkpoint.txt
[2025-10-10 22:39:13] -rw------- 1 boinc boinc       822 Oct 10 22:39 pilotlog.txt
[2025-10-10 22:39:13] -rw------- 1 boinc boinc        95 Oct 10 22:39 pilot_heartbeat.json
[2025-10-10 22:39:13] -rw------- 1 boinc boinc    253754 Oct 10 22:39 log.46676269._034402.job.log.1
[2025-10-10 22:39:13] -rw------- 1 boinc boinc       357 Oct 10 22:39 output.list
[2025-10-10 22:39:13] -rw-r--r-- 1 boinc boinc       620 Oct 10 22:39 runtime_log
[2025-10-10 22:39:13] -rw------- 1 boinc boinc    624640 Oct 10 22:39 result.tar.gz
[2025-10-10 22:39:13] -rw------- 1 boinc boinc       639 Oct 10 22:39 z6KODmaNMR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5gcNDmKU0G0n.diag
[2025-10-10 22:39:13] -rw-r--r-- 1 boinc boinc      8762 Oct 10 22:39 runtime_log.err
[2025-10-10 22:39:13] -rw-r--r-- 1 boinc boinc     21956 Oct 10 22:39 stderr.txt
[2025-10-10 22:39:13] HITS file was successfully produced:
[2025-10-10 22:39:13] -rw------- 1 boinc boinc 194390107 Oct 10 22:38 shared/HITS.pool.root.1
[2025-10-10 22:39:13]  *** Contents of shared directory: ***
[2025-10-10 22:39:13] total 406552
[2025-10-10 22:39:13] -rw-r--r-- 2 boinc boinc     15120 Oct 10 22:14 start_atlas.sh
[2025-10-10 22:39:13] -rw-r--r-- 2 boinc boinc    569685 Oct 10 22:14 input.tar.gz
[2025-10-10 22:39:13] -rw-r--r-- 2 boinc boinc 220689749 Oct 10 22:14 ATLAS.root_0
[2025-10-10 22:39:13] -rw------- 1 boinc boinc 194390107 Oct 10 22:38 HITS.pool.root.1
[2025-10-10 22:39:13] -rw------- 1 boinc boinc    624640 Oct 10 22:39 result.tar.gz
22:39:14 (1113243): run_atlas exited; CPU time 12884.727794
22:39:14 (1113243): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN