Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:50:42 (279409): wrapper (7.7.26015): starting
10:50:42 (279409): wrapper: running run_atlas (--nthreads 6)
[2025-10-11 10:50:42] Arguments: --nthreads 6
[2025-10-11 10:50:42] Threads: 6
[2025-10-11 10:50:42] Checking for CVMFS
[2025-10-11 10:50:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 10:50:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 10:50:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 10:50:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 10:50:43] 2.11.5.0 3102357 1745 79328 151567 1 187 42393563 52428801 866 130560 0 4312362 99.997 62918 15 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-11 10:50:43] CVMFS is ok
[2025-10-11 10:50:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 10:50:43] Checking for apptainer binary...
[2025-10-11 10:50:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 10:50:43] Running /usr/bin/apptainer --version
[2025-10-11 10:50:43] apptainer version 1.3.6-1.el9
[2025-10-11 10:50:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 10:50:43] testio002
[2025-10-11 10:50:43] apptainer works
[2025-10-11 10:50:43] Set ATHENA_PROC_NUMBER=6
[2025-10-11 10:50:43] Set ATHENA_CORE_NUMBER=6
[2025-10-11 10:50:43] Starting ATLAS job with PandaID=6837595214
[2025-10-11 10:50:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 12:00:19]  *** The last 200 lines of the pilot log: ***
[2025-10-11 12:00:19] 2025-10-11 02:59:27,743 | WARNING  | process 289986 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 12:00:19] 2025-10-11 02:59:27,743 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6837595214/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 12:00:19] 2025-10-11 02:59:27,775 | INFO     | number of running child processes to parent process 289986: 1
[2025-10-11 12:00:19] 2025-10-11 02:59:27,775 | INFO     | maximum number of monitored processes: 6
[2025-10-11 12:00:19] 2025-10-11 02:59:28,585 | INFO     | time since job start (4109s) is within the limit (172800.0s)
[2025-10-11 12:00:19] 2025-10-11 02:59:30,278 | INFO     | monitor loop #313: job 0:6837595214 is in state 'finished'
[2025-10-11 12:00:19] 2025-10-11 02:59:30,278 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 12:00:19] 2025-10-11 02:59:30,590 | INFO     | time since job start (4111s) is within the limit (172800.0s)
[2025-10-11 12:00:19] 2025-10-11 02:59:32,595 | INFO     | time since job start (4113s) is within the limit (172800.0s)
[2025-10-11 12:00:19] 2025-10-11 02:59:32,595 | INFO     | 4122s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-11 12:00:19] 2025-10-11 02:59:32,781 | INFO     | monitor loop #314: job 0:6837595214 is in state 'finished'
[2025-10-11 12:00:19] 2025-10-11 02:59:32,781 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 12:00:19] 2025-10-11 02:59:34,600 | INFO     | time since job start (4115s) is within the limit (172800.0s)
[2025-10-11 12:00:19] 2025-10-11 02:59:35,283 | INFO     | monitor loop #315: job 0:6837595214 is in state 'finished'
[2025-10-11 12:00:19] 2025-10-11 02:59:35,283 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 12:00:19] 2025-10-11 02:59:36,605 | INFO     | time since job start (4117s) is within the limit (172800.0s)
[2025-10-11 12:00:19] 2025-10-11 02:59:37,786 | INFO     | monitor loop #316: job 0:6837595214 is in state 'finished'
[2025-10-11 12:00:19] 2025-10-11 02:59:37,786 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 12:00:19] 2025-10-11 02:59:38,610 | INFO     | time since job start (4119s) is within the limit (172800.0s)
[2025-10-11 12:00:19] 2025-10-11 02:59:40,289 | INFO     | monitor loop #317: job 0:6837595214 is in state 'finished'
[2025-10-11 12:00:19] 2025-10-11 02:59:40,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 12:00:19] 2025-10-11 02:59:40,615 | INFO     | time since job start (4121s) is within the limit (172800.0s)
[2025-10-11 12:00:19] 2025-10-11 02:59:42,620 | INFO     | time since job start (4123s) is within the limit (172800.0s)
[2025-10-11 12:00:19] 2025-10-11 02:59:42,792 | INFO     | monitor loop #318: job 0:6837595214 is in state 'finished'
[2025-10-11 12:00:19] 2025-10-11 02:59:42,792 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 12:00:19] 2025-10-11 02:59:43,682 | INFO     | PID=283210 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 12:00:19] 2025-10-11 02:59:43,682 | INFO     | .. there are 2 such processes running
[2025-10-11 12:00:19] 2025-10-11 02:59:44,682 | INFO     | time since job start (4125s) is within the limit (172800.0s)
[2025-10-11 12:00:19] 2025-10-11 02:59:45,295 | INFO     | monitor loop #319: job 0:6837595214 is in state 'finished'
[2025-10-11 12:00:19] 2025-10-11 02:59:45,295 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 12:00:19] 2025-10-11 02:59:46,688 | INFO     | time since job start (4127s) is within the limit (172800.0s)
[2025-10-11 12:00:19] 2025-10-11 02:59:47,798 | INFO     | monitor loop #320: job 0:6837595214 is in state 'finished'
[2025-10-11 12:00:19] 2025-10-11 02:59:47,798 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 12:00:19] 2025-10-11 02:59:48,461 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 12:00:19] 2025-10-11 02:59:48,462 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3914.1200624999997
[2025-10-11 12:00:19] 2025-10-11 02:59:48,464 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6837595214/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 12:00:19] 2025-10-11 02:59:48,465 | INFO     | extracted standard info from prmon json
[2025-10-11 12:00:19] 2025-10-11 02:59:48,465 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 12:00:19] 2025-10-11 02:59:48,465 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 12:00:19] 2025-10-11 02:59:48,465 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 12:00:19] 2025-10-11 02:59:48,465 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 12:00:19] 2025-10-11 02:59:48,466 | INFO     | fitting pss+swap vs Time
[2025-10-11 12:00:19] 2025-10-11 02:59:48,466 | INFO     | sum of square deviations: 66959395.0
[2025-10-11 12:00:19] 2025-10-11 02:59:48,466 | INFO     | sum of deviations: 879632413.5000001
[2025-10-11 12:00:19] 2025-10-11 02:59:48,466 | INFO     | mean x: 1760149578.5
[2025-10-11 12:00:19] 2025-10-11 02:59:48,466 | INFO     | mean y: 2463573.4166666665
[2025-10-11 12:00:19] 2025-10-11 02:59:48,466 | INFO     | -- intersect: -23120275541.190968
[2025-10-11 12:00:19] 2025-10-11 02:59:48,466 | INFO     | intersect: -23120275541.190968
[2025-10-11 12:00:19] 2025-10-11 02:59:48,466 | INFO     | chi2: 0.003950155960483767
[2025-10-11 12:00:19] 2025-10-11 02:59:48,467 | INFO     | -- intersect: -23120275541.190968
[2025-10-11 12:00:19] 2025-10-11 02:59:48,467 | INFO     | current memory leak: 13.14 B/s (using 60 data points, chi2=0.00)
[2025-10-11 12:00:19] 2025-10-11 02:59:48,467 | INFO     | could have reported an average CPU frequency of 4209 MHz (6 samples)
[2025-10-11 12:00:19] 2025-10-11 02:59:48,467 | INFO     | ..............................
[2025-10-11 12:00:19] 2025-10-11 02:59:48,467 | INFO     | . Timing measurements:
[2025-10-11 12:00:19] 2025-10-11 02:59:48,467 | INFO     | . get job = 0 s
[2025-10-11 12:00:19] 2025-10-11 02:59:48,467 | INFO     | . initial setup = 8 s
[2025-10-11 12:00:19] 2025-10-11 02:59:48,467 | INFO     | . payload setup = 1 s
[2025-10-11 12:00:19] 2025-10-11 02:59:48,467 | INFO     | . stage-in = 0 s
[2025-10-11 12:00:19] 2025-10-11 02:59:48,467 | INFO     | . payload execution = 4088 s
[2025-10-11 12:00:19] 2025-10-11 02:59:48,467 | INFO     | . stage-out = 0 s
[2025-10-11 12:00:19] 2025-10-11 02:59:48,467 | INFO     | . log creation = 0 s
[2025-10-11 12:00:19] 2025-10-11 02:59:48,467 | INFO     | ..............................
[2025-10-11 12:00:19] 2025-10-11 02:59:48,527 | INFO     | 
[2025-10-11 12:00:19] 2025-10-11 02:59:48,527 | INFO     | job summary report
[2025-10-11 12:00:19] 2025-10-11 02:59:48,527 | INFO     | --------------------------------------------------
[2025-10-11 12:00:19] 2025-10-11 02:59:48,527 | INFO     | PanDA job id: 6837595214
[2025-10-11 12:00:19] 2025-10-11 02:59:48,527 | INFO     | task id: 46676269
[2025-10-11 12:00:19] 2025-10-11 02:59:48,527 | INFO     | errors: (none)
[2025-10-11 12:00:19] 2025-10-11 02:59:48,528 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 12:00:19] 2025-10-11 02:59:48,528 | INFO     | pilot state: finished 
[2025-10-11 12:00:19] 2025-10-11 02:59:48,528 | INFO     | transexitcode: 0
[2025-10-11 12:00:19] 2025-10-11 02:59:48,528 | INFO     | exeerrorcode: 0
[2025-10-11 12:00:19] 2025-10-11 02:59:48,528 | INFO     | exeerrordiag: 
[2025-10-11 12:00:19] 2025-10-11 02:59:48,528 | INFO     | exitcode: 0
[2025-10-11 12:00:19] 2025-10-11 02:59:48,528 | INFO     | exitmsg: OK
[2025-10-11 12:00:19] 2025-10-11 02:59:48,528 | INFO     | cpuconsumptiontime: 22481 s
[2025-10-11 12:00:19] 2025-10-11 02:59:48,528 | INFO     | nevents: 400
[2025-10-11 12:00:19] 2025-10-11 02:59:48,528 | INFO     | neventsw: 0
[2025-10-11 12:00:19] 2025-10-11 02:59:48,528 | INFO     | pid: 289986
[2025-10-11 12:00:19] 2025-10-11 02:59:48,528 | INFO     | pgrp: 289986
[2025-10-11 12:00:19] 2025-10-11 02:59:48,528 | INFO     | corecount: 6
[2025-10-11 12:00:19] 2025-10-11 02:59:48,528 | INFO     | event service: False
[2025-10-11 12:00:19] 2025-10-11 02:59:48,528 | INFO     | sizes: {0: 2348806, 1: 2349068, 11: 2349096, 4093: 2384097, 4094: 2384097, 4117: 2384291}
[2025-10-11 12:00:19] 2025-10-11 02:59:48,528 | INFO     | --------------------------------------------------
[2025-10-11 12:00:19] 2025-10-11 02:59:48,528 | INFO     | 
[2025-10-11 12:00:19] 2025-10-11 02:59:48,528 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-11 12:00:19] 2025-10-11 02:59:48,539 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 12:00:19] 2025-10-11 02:59:48,539 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 12:00:19] 2025-10-11 02:59:48,539 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 12:00:19] 2025-10-11 02:59:48,539 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 12:00:19] 2025-10-11 02:59:48,539 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 12:00:19] 2025-10-11 02:59:48,539 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 12:00:19] 2025-10-11 02:59:48,540 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 12:00:19] 2025-10-11 02:59:48,540 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 12:00:19] 2025-10-11 02:59:48,540 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 12:00:19] 2025-10-11 02:59:48,540 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 12:00:19] 2025-10-11 02:59:48,540 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 12:00:19] 2025-10-11 02:59:48,540 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 12:00:19] 2025-10-11 02:59:48,540 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 12:00:19] 2025-10-11 02:59:48,540 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 12:00:19] 2025-10-11 02:59:48,540 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 12:00:19] 2025-10-11 02:59:48,540 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 12:00:19] 2025-10-11 02:59:48,540 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 12:00:19] 2025-10-11 02:59:48,540 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 12:00:19] 2025-10-11 02:59:48,540 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 12:00:19] 2025-10-11 02:59:48,540 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 12:00:19] 2025-10-11 02:59:48,540 | INFO     | job 6837595214 has completed (purged errors)
[2025-10-11 12:00:19] 2025-10-11 02:59:48,540 | INFO     | overall cleanup function is called
[2025-10-11 12:00:19] 2025-10-11 02:59:49,546 | INFO     | --- collectZombieJob: --- 10, [289986]
[2025-10-11 12:00:19] 2025-10-11 02:59:49,546 | INFO     | zombie collector waiting for pid 289986
[2025-10-11 12:00:19] 2025-10-11 02:59:49,546 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 12:00:19] 2025-10-11 02:59:49,546 | INFO     | collected zombie processes
[2025-10-11 12:00:19] 2025-10-11 02:59:49,546 | INFO     | will attempt to kill all subprocesses of pid=289986
[2025-10-11 12:00:19] 2025-10-11 02:59:49,604 | INFO     | process IDs to be killed: [289986] (in reverse order)
[2025-10-11 12:00:19] 2025-10-11 02:59:49,626 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 12:00:19] 2025-10-11 02:59:49,626 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 12:00:19] 2025-10-11 02:59:49,628 | INFO     | did not find any defunct processes belonging to 289986
[2025-10-11 12:00:19] 2025-10-11 02:59:49,630 | INFO     | did not find any defunct processes belonging to 289986
[2025-10-11 12:00:19] 2025-10-11 02:59:49,630 | INFO     | ready for new job
[2025-10-11 12:00:19] 2025-10-11 02:59:49,630 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 12:00:19] 2025-10-11 02:59:49,631 | INFO     | ***************************************
[2025-10-11 12:00:19] 2025-10-11 02:59:49,631 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 12:00:19] 2025-10-11 02:59:49,631 | INFO     | ***************************************
[2025-10-11 12:00:19] 2025-10-11 02:59:49,631 | INFO     | 
[2025-10-11 12:00:19] 2025-10-11 02:59:49,632 | INFO     | architecture information:
[2025-10-11 12:00:19] 2025-10-11 02:59:49,632 | INFO     | executing command: cat /etc/os-release
[2025-10-11 12:00:19] 2025-10-11 02:59:49,639 | INFO     | cat /etc/os-release:
[2025-10-11 12:00:19] NAME="CentOS Linux"
[2025-10-11 12:00:19] VERSION="7 (Core)"
[2025-10-11 12:00:19] ID="centos"
[2025-10-11 12:00:19] ID_LIKE="rhel fedora"
[2025-10-11 12:00:19] VERSION_ID="7"
[2025-10-11 12:00:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 12:00:19] ANSI_COLOR="0;31"
[2025-10-11 12:00:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 12:00:19] HOME_URL="https://www.centos.org/"
[2025-10-11 12:00:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 12:00:19] 
[2025-10-11 12:00:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 12:00:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 12:00:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 12:00:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 12:00:19] 
[2025-10-11 12:00:19] 2025-10-11 02:59:49,639 | INFO     | ***************************************
[2025-10-11 12:00:19] 2025-10-11 02:59:50,141 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-11 12:00:19] 2025-10-11 02:59:50,148 | INFO     | sufficient remaining disk space (301563117568 B)
[2025-10-11 12:00:19] 2025-10-11 02:59:50,149 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 12:00:19] 2025-10-11 02:59:50,149 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 12:00:19] 2025-10-11 02:59:50,149 | INFO     | update_server=False
[2025-10-11 12:00:19] 2025-10-11 02:59:50,149 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 12:00:19] 2025-10-11 02:59:50,149 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:00:19] 2025-10-11 02:59:50,149 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 12:00:19] 2025-10-11 02:59:50,301 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 12:00:19] 2025-10-11 02:59:50,301 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 12:00:19] 2025-10-11 02:59:50,301 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:00:19] 2025-10-11 02:59:50,302 | INFO     | will abort loop
[2025-10-11 12:00:19] 2025-10-11 02:59:50,317 | INFO     | all job control threads have been joined
[2025-10-11 12:00:19] 2025-10-11 02:59:50,414 | INFO     | all payload control threads have been joined
[2025-10-11 12:00:19] 2025-10-11 02:59:50,962 | INFO     | all data control threads have been joined
[2025-10-11 12:00:19] 2025-10-11 02:59:51,154 | INFO     | [job] queue monitor thread has finished
[2025-10-11 12:00:19] 2025-10-11 02:59:51,154 | INFO     | [job] retrieve thread has finished
[2025-10-11 12:00:19] 2025-10-11 02:59:51,307 | INFO     | [job] job monitor thread has finished
[2025-10-11 12:00:19] 2025-10-11 02:59:51,323 | INFO     | [job] control thread has finished
[2025-10-11 12:00:19] 2025-10-11 02:59:51,323 | INFO     | [payload] failed_post thread has finished
[2025-10-11 12:00:19] 2025-10-11 02:59:51,366 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 12:00:19] 2025-10-11 02:59:51,419 | INFO     | [payload] control thread has finished
[2025-10-11 12:00:19] 2025-10-11 02:59:51,793 | INFO     | [data] copytool_in thread has finished
[2025-10-11 12:00:19] 2025-10-11 02:59:51,799 | INFO     | [job] validate thread has finished
[2025-10-11 12:00:19] 2025-10-11 02:59:51,818 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 12:00:19] 2025-10-11 02:59:51,967 | INFO     | [data] control thread has finished
[2025-10-11 12:00:19] 2025-10-11 02:59:52,059 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 12:00:19] 2025-10-11 02:59:52,154 | INFO     | [data] copytool_out thread has finished
[2025-10-11 12:00:19] 2025-10-11 02:59:52,288 | INFO     | [payload] validate_post thread has finished
[2025-10-11 12:00:19] 2025-10-11 02:59:53,586 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 12:00:19] 2025-10-11 02:59:57,592 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 12:00:19] 2025-10-11 03:00:00,762 | INFO     | job.realtimelogging is not enabled
[2025-10-11 12:00:19] 2025-10-11 03:00:01,767 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 12:00:19] 2025-10-11 03:00:05,247 | INFO     | [monitor] cgroup control has ended
[2025-10-11 12:00:19] 2025-10-11 03:00:07,200 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140363883484992)>', '<ExcThread(monitor, started 140363398366976)>']
[2025-10-11 12:00:19] 2025-10-11 03:00:12,225 | INFO     | all workflow threads have been joined
[2025-10-11 12:00:19] 2025-10-11 03:00:12,225 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 12:00:19] 2025-10-11 03:00:12,225 | INFO     | traces error code: 0
[2025-10-11 12:00:19] 2025-10-11 03:00:12,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 12:00:19] 2025-10-11 03:00:19,782 | INFO     | PID=283210 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 12:00:19] 2025-10-11 03:00:19,786 | INFO     | .. there are 2 such processes running
[2025-10-11 12:00:19] 2025-10-11 03:00:19,786 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 12:00:19] 2025-10-11 03:00:19,786 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 12:00:19] 2025-10-11 03:00:19,786 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 12:00:19] 2025-10-11 03:00:19,786 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 12:00:19] 2025-10-11 03:00:19,786 | INFO     | [monitor] control thread has ended
[2025-10-11 12:00:19] 2025-10-11 03:00:19,860 [wrapper] ==== pilot stdout END ====
[2025-10-11 12:00:19] 2025-10-11 03:00:19,867 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 12:00:19] 2025-10-11 03:00:19,868 [wrapper] pilotpid: 283210
[2025-10-11 12:00:19] 2025-10-11 03:00:19,870 [wrapper] Pilot exit status: 0
[2025-10-11 12:00:19] 2025-10-11 03:00:19,874 [wrapper] pandaids: 6837595214
[2025-10-11 12:00:19] 2025-10-11 03:00:19,887 [wrapper] cleanup supervisor_pilot  303564 283211
[2025-10-11 12:00:19] 2025-10-11 03:00:19,892 [wrapper] Test setup, not cleaning
[2025-10-11 12:00:19] 2025-10-11 03:00:19,894 [wrapper] apfmon messages muted
[2025-10-11 12:00:19] 2025-10-11 03:00:19,895 [wrapper] ==== wrapper stdout END ====
[2025-10-11 12:00:19] 2025-10-11 03:00:19,896 [wrapper] ==== wrapper stderr END ====
[2025-10-11 12:00:19]  *** Error codes and diagnostics ***
[2025-10-11 12:00:19]     "exeErrorCode": 0,
[2025-10-11 12:00:19]     "exeErrorDiag": "",
[2025-10-11 12:00:19]     "pilotErrorCode": 0,
[2025-10-11 12:00:19]     "pilotErrorDiag": "",
[2025-10-11 12:00:19]  *** Listing of results directory ***
[2025-10-11 12:00:19] total 421956
[2025-10-11 12:00:19] -rw-r--r--. 1 boinc boinc    557409 Oct 10 19:29 pilot3.tar.gz
[2025-10-11 12:00:19] -rwx------. 1 boinc boinc     36292 Oct 10 19:44 runpilot2-wrapper.sh
[2025-10-11 12:00:19] -rw-r--r--. 1 boinc boinc      5112 Oct 10 19:44 queuedata.json
[2025-10-11 12:00:19] -rw-r--r--. 1 boinc boinc       100 Oct 11 10:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 12:00:19] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 10:50 run_atlas
[2025-10-11 12:00:19] -rw-r--r--. 1 boinc boinc       105 Oct 11 10:50 job.xml
[2025-10-11 12:00:19] -rw-r--r--. 1 boinc boinc      9628 Oct 11 10:50 init_data.xml
[2025-10-11 12:00:19] -rw-r--r--. 2 boinc boinc 223844112 Oct 11 10:50 EVNT.46676267._001508.pool.root.1
[2025-10-11 12:00:19] -rw-r--r--. 2 boinc boinc     15120 Oct 11 10:50 start_atlas.sh
[2025-10-11 12:00:19] drwxrwx--x. 2 boinc boinc        68 Oct 11 10:50 shared
[2025-10-11 12:00:19] -rw-r--r--. 2 boinc boinc    569677 Oct 11 10:50 input.tar.gz
[2025-10-11 12:00:19] -rw-r--r--. 1 boinc boinc         0 Oct 11 10:50 boinc_lockfile
[2025-10-11 12:00:19] -rw-r--r--. 1 boinc boinc      2549 Oct 11 10:50 pandaJob.out
[2025-10-11 12:00:19] -rw-------. 1 boinc boinc    975517 Oct 11 10:50 agis_schedconf.cvmfs.json
[2025-10-11 12:00:19] -rw-------. 1 boinc boinc   1560580 Oct 11 10:50 agis_ddmendpoints.agis.ALL.json
[2025-10-11 12:00:19] drwx------. 5 boinc boinc      4096 Oct 11 10:50 pilot3
[2025-10-11 12:00:19] -rw-------. 1 boinc boinc 202499793 Oct 11 11:59 HITS.46676269._037136.pool.root.1
[2025-10-11 12:00:19] -rw-r--r--. 1 boinc boinc       529 Oct 11 11:59 boinc_task_state.xml
[2025-10-11 12:00:19] -rw-------. 1 boinc boinc      1041 Oct 11 11:59 memory_monitor_summary.json
[2025-10-11 12:00:19] -rw-------. 1 boinc boinc        95 Oct 11 11:59 pilot_heartbeat.json
[2025-10-11 12:00:19] -rw-------. 1 boinc boinc    301770 Oct 11 11:59 log.46676269._037136.job.log.tgz.1
[2025-10-11 12:00:19] -rw-------. 1 boinc boinc      7793 Oct 11 11:59 heartbeat.json
[2025-10-11 12:00:19] -rw-r--r--. 1 boinc boinc      8192 Oct 11 12:00 boinc_mmap_file
[2025-10-11 12:00:19] -rw-r--r--. 1 boinc boinc        27 Oct 11 12:00 wrapper_checkpoint.txt
[2025-10-11 12:00:19] -rw-------. 1 boinc boinc       821 Oct 11 12:00 pilotlog.txt
[2025-10-11 12:00:19] -rw-------. 1 boinc boinc    625392 Oct 11 12:00 log.46676269._037136.job.log.1
[2025-10-11 12:00:19] -rw-------. 1 boinc boinc       357 Oct 11 12:00 output.list
[2025-10-11 12:00:19] -rw-r--r--. 1 boinc boinc       620 Oct 11 12:00 runtime_log
[2025-10-11 12:00:19] -rw-------. 1 boinc boinc    942080 Oct 11 12:00 result.tar.gz
[2025-10-11 12:00:19] -rw-------. 1 boinc boinc       641 Oct 11 12:00 zr6LDmfmPR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmV7cNDm5A5cQm.diag
[2025-10-11 12:00:19] -rw-r--r--. 1 boinc boinc      8661 Oct 11 12:00 runtime_log.err
[2025-10-11 12:00:19] -rw-r--r--. 1 boinc boinc     21929 Oct 11 12:00 stderr.txt
[2025-10-11 12:00:19] HITS file was successfully produced:
[2025-10-11 12:00:19] -rw-------. 1 boinc boinc 202499793 Oct 11 11:59 shared/HITS.pool.root.1
[2025-10-11 12:00:19]  *** Contents of shared directory: ***
[2025-10-11 12:00:19] total 417852
[2025-10-11 12:00:19] -rw-r--r--. 2 boinc boinc 223844112 Oct 11 10:50 ATLAS.root_0
[2025-10-11 12:00:19] -rw-r--r--. 2 boinc boinc     15120 Oct 11 10:50 start_atlas.sh
[2025-10-11 12:00:19] -rw-r--r--. 2 boinc boinc    569677 Oct 11 10:50 input.tar.gz
[2025-10-11 12:00:19] -rw-------. 1 boinc boinc 202499793 Oct 11 11:59 HITS.pool.root.1
[2025-10-11 12:00:19] -rw-------. 1 boinc boinc    942080 Oct 11 12:00 result.tar.gz
12:00:21 (279409): run_atlas exited; CPU time 22504.274640
12:00:21 (279409): called boinc_finish(0)

</stderr_txt>
]]>

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