Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:30:04 (540580): wrapper (7.7.26015): starting
12:30:04 (540580): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 12:30:04] Arguments: --nthreads 12
[2025-10-10 12:30:04] Threads: 12
[2025-10-10 12:30:04] Checking for CVMFS
[2025-10-10 12:30:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 12:30:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 12:30:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 12:30:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 12:30:06] 2.11.5.0 2495 28670 235052 151559 0 237 43820308 45568000 18980 130560 0 218384849 99.822 113672189 21369 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-10 12:30:06] CVMFS is ok
[2025-10-10 12:30:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 12:30:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 12:30:06] Further information can be found at the LHC@home message board.
[2025-10-10 12:30:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 12:30:06] Checking for apptainer binary...
[2025-10-10 12:30:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 12:30:06] Running /usr/bin/apptainer --version
[2025-10-10 12:30:06] apptainer version 1.4.1-1.el9
[2025-10-10 12:30:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 12:30:07] wns0052.triumf.lcg
[2025-10-10 12:30:07] apptainer works
[2025-10-10 12:30:07] Set ATHENA_PROC_NUMBER=12
[2025-10-10 12:30:07] Set ATHENA_CORE_NUMBER=12
[2025-10-10 12:30:07] Starting ATLAS job with PandaID=6837669186
[2025-10-10 12:30:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 12:37:22]  *** The last 200 lines of the pilot log: ***
[2025-10-10 12:37:22] 2025-10-10 19:36:46,478 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 12:37:22] 2025-10-10 19:36:46,478 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 12:37:22] 2025-10-10 19:36:46,478 | WARNING  | wrong length of table data, x=[1760124812.0], y=[960.0] (must be same and length>=4)
[2025-10-10 12:37:22] 2025-10-10 19:36:46,478 | INFO     | could have reported an average CPU frequency of 2093 MHz (4 samples)
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | ..............................
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . Timing measurements:
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . get job = 0 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . initial setup = 4 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . payload setup = 42 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . stage-in = 0 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . payload execution = 72 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . stage-out = 1 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . log creation = 0 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | ..............................
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837669186/pilotlog.txt
[2025-10-10 12:37:22] 2025-10-10 19:36:46,588 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-10 12:37:22] - Log from pilotlog.txt -
[2025-10-10 12:37:22] 2025-10-10 19:36:46,476 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837669186/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 12:37:22] 2025-10-10 19:36:46,477 | INFO     | extracted standard info from prmon json
[2025-10-10 12:37:22] 2025-10-10 19:36:46,477 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 12:37:22] 2025-10-10 19:36:46,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 12:37:22] 2025-10-10 19:36:46,478 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 12:37:22] 2025-10-10 19:36:46,478 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 12:37:22] 2025-10-10 19:36:46,478 | WARNING  | wrong length of table data, x=[1760124812.0], y=[960.0] (must be same and length>=4)
[2025-10-10 12:37:22] 2025-10-10 19:36:46,478 | INFO     | could have reported an average CPU frequency of 2093 MHz (4 samples)
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | ..............................
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . Timing measurements:
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . get job = 0 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . initial setup = 4 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . payload setup = 42 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . stage-in = 0 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . payload execution = 72 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . stage-out = 1 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . log creation = 0 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | ..............................
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837669186/pilotlog.txt
[2025-10-10 12:37:22] 2025-10-10 19:36:46,588 | WARNING  | 
[2025-10-10 12:37:22] [begin log extracts]
[2025-10-10 12:37:22] - Log from pilotlog.txt -
[2025-10-10 12:37:22] 2025-10-10 19:36:46,476 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837669186/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 12:37:22] 2025-10-10 19:36:46,477 | INFO     | extracted standard info from prmon json
[2025-10-10 12:37:22] 2025-10-10 19:36:46,477 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 12:37:22] 2025-10-10 19:36:46,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 12:37:22] 2025-10-10 19:36:46,478 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 12:37:22] 2025-10-10 19:36:46,478 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 12:37:22] 2025-10-10 19:36:46,478 | WARNING  | wrong length of table data, x=[1760124812.0], y=[960.0] (must be same and length>=4)
[2025-10-10 12:37:22] 2025-10-10 19:36:46,478 | INFO     | could have reported an average CPU frequency of 2093 MHz (4 samples)
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | ..............................
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . Timing measurements:
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . get job = 0 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . initial setup = 4 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . payload setup = 42 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . stage-in = 0 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . payload execution = 72 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . stage-out = 1 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | . log creation = 0 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | ..............................
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 12:37:22] 2025-10-10 19:36:46,479 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837669186/pilotlog.txt
[2025-10-10 12:37:22] [end log extracts]
[2025-10-10 12:37:22] 2025-10-10 19:36:46,588 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-10 12:37:22] 2025-10-10 19:36:46,589 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-10 12:37:22] 2025-10-10 19:36:46,622 | INFO     | time since job start (342s) is within the limit (172800.0s)
[2025-10-10 12:37:22] 2025-10-10 19:36:46,871 | INFO     | 
[2025-10-10 12:37:22] 2025-10-10 19:36:46,871 | INFO     | job summary report
[2025-10-10 12:37:22] 2025-10-10 19:36:46,871 | INFO     | --------------------------------------------------
[2025-10-10 12:37:22] 2025-10-10 19:36:46,884 | INFO     | PanDA job id: 6837669186
[2025-10-10 12:37:22] 2025-10-10 19:36:46,885 | INFO     | task id: 46676269
[2025-10-10 12:37:22] 2025-10-10 19:36:46,885 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-10 12:34:03,132 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-10 12:37:22] 2025-10-10 19:36:46,885 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 12:37:22] 2025-10-10 19:36:46,885 | INFO     | pilot state: failed 
[2025-10-10 12:37:22] 2025-10-10 19:36:46,885 | INFO     | transexitcode: 65
[2025-10-10 12:37:22] 2025-10-10 19:36:46,885 | INFO     | exeerrorcode: 65
[2025-10-10 12:37:22] 2025-10-10 19:36:46,885 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 12:37:22] 2025-10-10 19:36:46,885 | INFO     | exitcode: 65
[2025-10-10 12:37:22] 2025-10-10 19:36:46,885 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 12:37:22] 2025-10-10 19:36:46,885 | INFO     | cpuconsumptiontime: 22 s
[2025-10-10 12:37:22] 2025-10-10 19:36:46,885 | INFO     | nevents: 0
[2025-10-10 12:37:22] 2025-10-10 19:36:46,885 | INFO     | neventsw: 0
[2025-10-10 12:37:22] 2025-10-10 19:36:46,885 | INFO     | pid: 551777
[2025-10-10 12:37:22] 2025-10-10 19:36:46,885 | INFO     | pgrp: 551777
[2025-10-10 12:37:22] 2025-10-10 19:36:46,885 | INFO     | corecount: 12
[2025-10-10 12:37:22] 2025-10-10 19:36:46,885 | INFO     | event service: False
[2025-10-10 12:37:22] 2025-10-10 19:36:46,886 | INFO     | sizes: {0: 2348023, 1: 2348876, 2: 2348876, 13: 2348904, 25: 2348960, 33: 2349250, 36: 2349434, 120: 2372608, 122: 2376900, 123: 2376928, 273: 2377094}
[2025-10-10 12:37:22] 2025-10-10 19:36:46,886 | INFO     | --------------------------------------------------
[2025-10-10 12:37:22] 2025-10-10 19:36:46,886 | INFO     | 
[2025-10-10 12:37:22] 2025-10-10 19:36:46,886 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-10 12:37:22] 2025-10-10 19:36:47,029 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 12:37:22] 2025-10-10 19:36:47,029 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 12:37:22] 2025-10-10 19:36:47,029 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 12:37:22] 2025-10-10 19:36:47,029 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 12:37:22] 2025-10-10 19:36:47,029 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 12:37:22] 2025-10-10 19:36:47,029 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 12:37:22] 2025-10-10 19:36:47,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 12:37:22] 2025-10-10 19:36:47,030 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 12:37:22] 2025-10-10 19:36:47,030 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 12:37:22] 2025-10-10 19:36:47,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 12:37:22] 2025-10-10 19:36:47,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 12:37:22] 2025-10-10 19:36:47,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 12:37:22] 2025-10-10 19:36:47,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 12:37:22] 2025-10-10 19:36:47,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 12:37:22] 2025-10-10 19:36:47,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 12:37:22] 2025-10-10 19:36:47,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 12:37:22] 2025-10-10 19:36:47,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 12:37:22] 2025-10-10 19:36:47,030 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 12:37:22] 2025-10-10 19:36:47,030 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 12:37:22] 2025-10-10 19:36:47,030 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 12:37:22] 2025-10-10 19:36:47,031 | INFO     | job 6837669186 has completed (purged errors)
[2025-10-10 12:37:22] 2025-10-10 19:36:47,031 | INFO     | overall cleanup function is called
[2025-10-10 12:37:22] 2025-10-10 19:36:48,038 | INFO     | --- collectZombieJob: --- 10, [551777]
[2025-10-10 12:37:22] 2025-10-10 19:36:48,039 | INFO     | zombie collector waiting for pid 551777
[2025-10-10 12:37:22] 2025-10-10 19:36:48,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 12:37:22] 2025-10-10 19:36:48,039 | INFO     | collected zombie processes
[2025-10-10 12:37:22] 2025-10-10 19:36:48,039 | INFO     | will attempt to kill all subprocesses of pid=551777
[2025-10-10 12:37:22] 2025-10-10 19:36:49,814 | INFO     | process IDs to be killed: [551777] (in reverse order)
[2025-10-10 12:37:22] 2025-10-10 19:36:50,035 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 12:37:22] 2025-10-10 19:36:50,035 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 12:37:22] 2025-10-10 19:36:50,047 | INFO     | did not find any defunct processes belonging to 551777
[2025-10-10 12:37:22] 2025-10-10 19:36:50,061 | INFO     | did not find any defunct processes belonging to 551777
[2025-10-10 12:37:22] 2025-10-10 19:36:50,061 | INFO     | ready for new job
[2025-10-10 12:37:22] 2025-10-10 19:36:50,061 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 12:37:22] 2025-10-10 19:36:50,071 | INFO     | ***************************************
[2025-10-10 12:37:22] 2025-10-10 19:36:50,072 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 12:37:22] 2025-10-10 19:36:50,073 | INFO     | ***************************************
[2025-10-10 12:37:22] 2025-10-10 19:36:50,073 | INFO     | 
[2025-10-10 12:37:22] 2025-10-10 19:36:50,093 | INFO     | architecture information:
[2025-10-10 12:37:22] 2025-10-10 19:36:50,094 | INFO     | executing command: cat /etc/os-release
[2025-10-10 12:37:22] 2025-10-10 19:36:50,180 | INFO     | cat /etc/os-release:
[2025-10-10 12:37:22] NAME="CentOS Linux"
[2025-10-10 12:37:22] VERSION="7 (Core)"
[2025-10-10 12:37:22] ID="centos"
[2025-10-10 12:37:22] ID_LIKE="rhel fedora"
[2025-10-10 12:37:22] VERSION_ID="7"
[2025-10-10 12:37:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 12:37:22] ANSI_COLOR="0;31"
[2025-10-10 12:37:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 12:37:22] HOME_URL="https://www.centos.org/"
[2025-10-10 12:37:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 12:37:22] 
[2025-10-10 12:37:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 12:37:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 12:37:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 12:37:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 12:37:22] 
[2025-10-10 12:37:22] 2025-10-10 19:36:50,180 | INFO     | ***************************************
[2025-10-10 12:37:22] 2025-10-10 19:36:50,684 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-10 12:37:22] 2025-10-10 19:36:50,800 | INFO     | sufficient remaining disk space (1867666948096 B)
[2025-10-10 12:37:22] 2025-10-10 19:36:50,800 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 12:37:22] 2025-10-10 19:36:50,800 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 12:37:22] 2025-10-10 19:36:50,800 | INFO     | update_server=False
[2025-10-10 12:37:22] 2025-10-10 19:36:50,800 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 12:37:22] 2025-10-10 19:36:50,801 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:37:22] 2025-10-10 19:36:50,801 | INFO     | aborting loop
[2025-10-10 12:37:22] 2025-10-10 19:36:51,326 | INFO     | all payload control threads have been joined
[2025-10-10 12:37:22] 2025-10-10 19:36:51,483 | INFO     | all data control threads have been joined
[2025-10-10 12:37:22] 2025-10-10 19:36:51,706 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 12:37:22] 2025-10-10 19:36:51,806 | INFO     | [job] retrieve thread has finished
[2025-10-10 12:37:22] 2025-10-10 19:36:51,807 | INFO     | [job] job monitor thread has finished
[2025-10-10 12:37:22] 2025-10-10 19:36:51,858 | INFO     | all job control threads have been joined
[2025-10-10 12:37:22] 2025-10-10 19:36:51,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:37:22] 2025-10-10 19:36:52,168 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 12:37:22] 2025-10-10 19:36:52,221 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 12:37:22] 2025-10-10 19:36:52,332 | INFO     | [payload] control thread has finished
[2025-10-10 12:37:22] 2025-10-10 19:36:52,393 | INFO     | [data] copytool_in thread has finished
[2025-10-10 12:37:22] 2025-10-10 19:36:52,493 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 12:37:22] 2025-10-10 19:36:52,494 | INFO     | [job] validate thread has finished
[2025-10-10 12:37:22] 2025-10-10 19:36:52,498 | INFO     | [data] control thread has finished
[2025-10-10 12:37:22] 2025-10-10 19:36:52,715 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 12:37:22] 2025-10-10 19:36:52,748 | INFO     | [payload] failed_post thread has finished
[2025-10-10 12:37:22] 2025-10-10 19:36:52,864 | INFO     | [job] control thread has finished
[2025-10-10 12:37:22] 2025-10-10 19:36:52,895 | INFO     | [job] queue monitor thread has finished
[2025-10-10 12:37:22] 2025-10-10 19:36:53,012 | INFO     | [payload] validate_post thread has finished
[2025-10-10 12:37:22] 2025-10-10 19:36:53,168 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 12:37:22] 2025-10-10 19:36:53,713 | INFO     | [data] copytool_out thread has finished
[2025-10-10 12:37:22] 2025-10-10 19:36:56,231 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 12:37:22] 2025-10-10 19:37:03,919 | INFO     | [monitor] cgroup control has ended
[2025-10-10 12:37:22] 2025-10-10 19:37:04,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139680196376384)>', '<ExcThread(monitor, started 139679875700480)>']
[2025-10-10 12:37:22] 2025-10-10 19:37:09,392 | INFO     | all workflow threads have been joined
[2025-10-10 12:37:22] 2025-10-10 19:37:09,393 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 12:37:22] 2025-10-10 19:37:09,393 | INFO     | traces error code: 0
[2025-10-10 12:37:22] 2025-10-10 19:37:09,393 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 12:37:22] 2025-10-10 19:37:21,232 | INFO     | PID=544671 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 12:37:22] 2025-10-10 19:37:21,232 | INFO     | .. there are 42 such processes running
[2025-10-10 12:37:22] 2025-10-10 19:37:21,249 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 12:37:22] 2025-10-10 19:37:21,249 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 12:37:22] 2025-10-10 19:37:21,249 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 12:37:22] 2025-10-10 19:37:21,249 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 12:37:22] 2025-10-10 19:37:21,249 | INFO     | [monitor] control thread has ended
[2025-10-10 12:37:22] 2025-10-10 19:37:22,015 [wrapper] ==== pilot stdout END ====
[2025-10-10 12:37:22] 2025-10-10 19:37:22,036 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 12:37:22] 2025-10-10 19:37:22,046 [wrapper] pilotpid: 544671
[2025-10-10 12:37:22] 2025-10-10 19:37:22,053 [wrapper] Pilot exit status: 0
[2025-10-10 12:37:22] 2025-10-10 19:37:22,074 [wrapper] pandaids: 6837669186
[2025-10-10 12:37:22] 2025-10-10 19:37:22,285 [wrapper] cleanup supervisor_pilot  544683 544672
[2025-10-10 12:37:22] 2025-10-10 19:37:22,289 [wrapper] Test setup, not cleaning
[2025-10-10 12:37:22] 2025-10-10 19:37:22,292 [wrapper] apfmon messages muted
[2025-10-10 12:37:22] 2025-10-10 19:37:22,298 [wrapper] ==== wrapper stdout END ====
[2025-10-10 12:37:22] 2025-10-10 19:37:22,300 [wrapper] ==== wrapper stderr END ====
[2025-10-10 12:37:22]  *** Error codes and diagnostics ***
[2025-10-10 12:37:22]     "exeErrorCode": 65,
[2025-10-10 12:37:22]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 12:37:22]     "pilotErrorCode": 1305,
[2025-10-10 12:37:22]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 12:37:22]  *** Listing of results directory ***
[2025-10-10 12:37:22] total 218440
[2025-10-10 12:37:22] -rw-r--r--. 1 boinc boinc    557409 Oct 10 09:15 pilot3.tar.gz
[2025-10-10 12:37:22] -rwx------. 1 boinc boinc     36292 Oct 10 09:33 runpilot2-wrapper.sh
[2025-10-10 12:37:22] -rw-r--r--. 1 boinc boinc      5112 Oct 10 09:33 queuedata.json
[2025-10-10 12:37:22] -rw-r--r--. 1 boinc boinc       100 Oct 10 12:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 12:37:22] -rwxr-xr-x. 1 boinc boinc      7986 Oct 10 12:30 run_atlas
[2025-10-10 12:37:22] -rw-r--r--. 1 boinc boinc       105 Oct 10 12:30 job.xml
[2025-10-10 12:37:22] -rw-r--r--. 1 boinc boinc      6589 Oct 10 12:30 init_data.xml
[2025-10-10 12:37:22] -rw-r--r--. 2 boinc boinc 219535905 Oct 10 12:30 EVNT.46676267._001686.pool.root.1
[2025-10-10 12:37:22] -rw-r--r--. 2 boinc boinc     15120 Oct 10 12:30 start_atlas.sh
[2025-10-10 12:37:22] drwxrwx--x. 2 boinc boinc      4096 Oct 10 12:30 shared
[2025-10-10 12:37:22] -rw-r--r--. 2 boinc boinc    569674 Oct 10 12:30 input.tar.gz
[2025-10-10 12:37:22] -rw-r--r--. 1 boinc boinc         0 Oct 10 12:30 boinc_lockfile
[2025-10-10 12:37:22] -rw-r--r--. 1 boinc boinc      2547 Oct 10 12:30 pandaJob.out
[2025-10-10 12:37:22] -rw-------. 1 boinc boinc    975541 Oct 10 12:30 agis_schedconf.cvmfs.json
[2025-10-10 12:37:22] -rw-------. 1 boinc boinc   1560580 Oct 10 12:31 agis_ddmendpoints.agis.ALL.json
[2025-10-10 12:37:22] drwx------. 5 boinc boinc      4096 Oct 10 12:31 pilot3
[2025-10-10 12:37:22] -rw-r--r--. 1 boinc boinc       524 Oct 10 12:34 boinc_task_state.xml
[2025-10-10 12:37:22] -rw-------. 1 boinc boinc       951 Oct 10 12:34 memory_monitor_summary.json
[2025-10-10 12:37:22] -rw-------. 1 boinc boinc     21522 Oct 10 12:34 log.46676269._041586.job.log.tgz.1
[2025-10-10 12:37:22] -rw-------. 1 boinc boinc      8380 Oct 10 12:36 heartbeat.json
[2025-10-10 12:37:22] -rw-r--r--. 1 boinc boinc        23 Oct 10 12:37 wrapper_checkpoint.txt
[2025-10-10 12:37:22] -rw-------. 1 boinc boinc        95 Oct 10 12:37 pilot_heartbeat.json
[2025-10-10 12:37:22] -rw-------. 1 boinc boinc       822 Oct 10 12:37 pilotlog.txt
[2025-10-10 12:37:22] -rw-------. 1 boinc boinc     98914 Oct 10 12:37 log.46676269._041586.job.log.1
[2025-10-10 12:37:22] -rw-------. 1 boinc boinc       188 Oct 10 12:37 output.list
[2025-10-10 12:37:22] -rw-r--r--. 1 boinc boinc       620 Oct 10 12:37 runtime_log
[2025-10-10 12:37:22] -rw-------. 1 boinc boinc    143360 Oct 10 12:37 result.tar.gz
[2025-10-10 12:37:22] -rw-r--r--. 1 boinc boinc      8528 Oct 10 12:37 runtime_log.err
[2025-10-10 12:37:22] -rw-------. 1 boinc boinc       645 Oct 10 12:37 E7gLDm2EVR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTqdNDmiEwvKo.diag
[2025-10-10 12:37:22] -rw-r--r--. 1 boinc boinc     21836 Oct 10 12:37 stderr.txt
[2025-10-10 12:37:22] -rw-r--r--. 1 boinc boinc      8192 Oct 10 12:37 boinc_mmap_file
[2025-10-10 12:37:22] No HITS result produced
[2025-10-10 12:37:22]  *** Contents of shared directory: ***
[2025-10-10 12:37:22] total 215112
[2025-10-10 12:37:22] -rw-r--r--. 2 boinc boinc 219535905 Oct 10 12:30 ATLAS.root_0
[2025-10-10 12:37:22] -rw-r--r--. 2 boinc boinc     15120 Oct 10 12:30 start_atlas.sh
[2025-10-10 12:37:22] -rw-r--r--. 2 boinc boinc    569674 Oct 10 12:30 input.tar.gz
[2025-10-10 12:37:22] -rw-------. 1 boinc boinc    143360 Oct 10 12:37 result.tar.gz
12:37:23 (540580): run_atlas exited; CPU time 40.085386
12:37:23 (540580): called boinc_finish(0)

</stderr_txt>
]]>

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