Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:55:27 (2578614): wrapper (7.7.26015): starting
14:55:27 (2578614): wrapper: running run_atlas (--nthreads 9)
[2025-10-10 14:55:27] Arguments: --nthreads 9
[2025-10-10 14:55:27] Threads: 9
[2025-10-10 14:55:27] Checking for CVMFS
[2025-10-10 14:55:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 14:55:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 14:55:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 14:55:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 14:55:28] 2.13.2.0 3683012 10294 154228 151558 3 437 34714552 40960000 31806 16776704 0 102419498 99.804 54957974 32589 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 14:55:28] CVMFS is ok
[2025-10-10 14:55:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 14:55:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 14:55:28] Further information can be found at the LHC@home message board.
[2025-10-10 14:55:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 14:55:28] Checking for apptainer binary...
[2025-10-10 14:55:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 14:55:28] Running /usr/bin/apptainer --version
[2025-10-10 14:55:28] apptainer version 1.4.3-1.el9
[2025-10-10 14:55:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 14:55:29] c8-7-4.aglt2.org
[2025-10-10 14:55:29] apptainer works
[2025-10-10 14:55:29] Set ATHENA_PROC_NUMBER=9
[2025-10-10 14:55:29] Set ATHENA_CORE_NUMBER=9
[2025-10-10 14:55:29] Starting ATLAS job with PandaID=6837451367
[2025-10-10 14:55:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 15:53:59]  *** The last 200 lines of the pilot log: ***
[2025-10-10 15:53:59] ]
[2025-10-10 15:53:59] 2025-10-10 19:52:51,200 | INFO     | transferring file log.46676269._033464.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6837451367/log.46676269._033464.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-10 15:53:59] 2025-10-10 19:52:51,200 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6837451367/log.46676269._033464.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._033464.job
[2025-10-10 15:53:59] 2025-10-10 19:52:51,217 | INFO     | adding to output.list: log.46676269._033464.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/05/log.46676269._033464.job.log.tg
[2025-10-10 15:53:59] 2025-10-10 19:52:51,218 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 15:53:59] 2025-10-10 19:52:51,218 | INFO     | summary of transferred files:
[2025-10-10 15:53:59] 2025-10-10 19:52:51,218 | INFO     |  -- lfn=log.46676269._033464.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 15:53:59] 2025-10-10 19:52:51,218 | INFO     | stage-out finished correctly
[2025-10-10 15:53:59] 2025-10-10 19:52:51,232 | INFO     | monitor loop #234: job 0:6837451367 is in state 'finished'
[2025-10-10 15:53:59] 2025-10-10 19:52:51,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 15:53:59] 2025-10-10 19:52:51,276 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 15:53:59] 2025-10-10 19:52:51,668 | INFO     | time since job start (3424s) is within the limit (172800.0s)
[2025-10-10 15:53:59] 2025-10-10 19:52:53,679 | INFO     | time since job start (3426s) is within the limit (172800.0s)
[2025-10-10 15:53:59] 2025-10-10 19:52:53,735 | INFO     | monitor loop #235: job 0:6837451367 is in state 'finished'
[2025-10-10 15:53:59] 2025-10-10 19:52:53,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 15:53:59] 2025-10-10 19:52:54,177 | INFO     | job 6837451367 has state=finished
[2025-10-10 15:53:59] 2025-10-10 19:52:54,181 | INFO     | preparing for final server update for job 6837451367 in state='finished'
[2025-10-10 15:53:59] 2025-10-10 19:52:54,182 | INFO     | this job has now completed (state=finished)
[2025-10-10 15:53:59] 2025-10-10 19:52:54,183 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 15:53:59] 2025-10-10 19:52:54,183 | INFO     | log transfer has been attempted: DONE
[2025-10-10 15:53:59] 2025-10-10 19:52:54,183 | INFO     | job 6837451367 has finished - writing final server update
[2025-10-10 15:53:59] 2025-10-10 19:52:54,183 | INFO     | total number of processed events: 400 (read)
[2025-10-10 15:53:59] 2025-10-10 19:52:54,183 | INFO     | executing command: lscpu
[2025-10-10 15:53:59] 2025-10-10 19:52:54,291 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 15:53:59] 2025-10-10 19:52:55,686 | INFO     | time since job start (3428s) is within the limit (172800.0s)
[2025-10-10 15:53:59] 2025-10-10 19:52:56,240 | INFO     | monitor loop #236: job 0:6837451367 is in state 'finished'
[2025-10-10 15:53:59] 2025-10-10 19:52:56,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 15:53:59] 2025-10-10 19:52:57,691 | INFO     | time since job start (3430s) is within the limit (172800.0s)
[2025-10-10 15:53:59] 2025-10-10 19:52:58,745 | INFO     | monitor loop #237: job 0:6837451367 is in state 'finished'
[2025-10-10 15:53:59] 2025-10-10 19:52:58,747 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 15:53:59] 2025-10-10 19:52:59,318 | INFO     | PID=2584388 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 15:53:59] 2025-10-10 19:52:59,318 | INFO     | .. there are 39 such processes running
[2025-10-10 15:53:59] 2025-10-10 19:53:00,321 | INFO     | time since job start (3433s) is within the limit (172800.0s)
[2025-10-10 15:53:59] 2025-10-10 19:53:00,470 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 15:53:59] 2025-10-10 19:53:00,475 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3795.8894374999963
[2025-10-10 15:53:59] 2025-10-10 19:53:00,487 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837451367/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 15:53:59] 2025-10-10 19:53:00,488 | INFO     | extracted standard info from prmon json
[2025-10-10 15:53:59] 2025-10-10 19:53:00,488 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 15:53:59] 2025-10-10 19:53:00,488 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 15:53:59] 2025-10-10 19:53:00,488 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 15:53:59] 2025-10-10 19:53:00,488 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 15:53:59] 2025-10-10 19:53:00,488 | INFO     | fitting pss+swap vs Time
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | sum of square deviations: 36465800.0
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | sum of deviations: 396690076.0
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | mean x: 1760124342.0
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | mean y: 2201384.8571428573
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | -- intersect: -19145160225.128925
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | intersect: -19145160225.128925
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | chi2: 0.015280092352701008
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | -- intersect: -19145160225.128925
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | current memory leak: 10.88 B/s (using 49 data points, chi2=0.02)
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | could have reported an average CPU frequency of 3792 MHz (5 samples)
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | ..............................
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | . Timing measurements:
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | . get job = 0 s
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | . initial setup = 2 s
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | . payload setup = 5 s
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | . stage-in = 0 s
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | . payload execution = 3398 s
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | . stage-out = 0 s
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | . log creation = 0 s
[2025-10-10 15:53:59] 2025-10-10 19:53:00,489 | INFO     | ..............................
[2025-10-10 15:53:59] 2025-10-10 19:53:00,906 | INFO     | 
[2025-10-10 15:53:59] 2025-10-10 19:53:00,906 | INFO     | job summary report
[2025-10-10 15:53:59] 2025-10-10 19:53:00,906 | INFO     | --------------------------------------------------
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | PanDA job id: 6837451367
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | task id: 46676269
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | errors: (none)
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | pilot state: finished 
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | transexitcode: 0
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | exeerrorcode: 0
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | exeerrordiag: 
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | exitcode: 0
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | exitmsg: OK
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | cpuconsumptiontime: 22955 s
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | nevents: 400
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | neventsw: 0
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | pid: 2593044
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | pgrp: 2593044
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | corecount: 9
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | event service: False
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | sizes: {0: 2348857, 1: 2348857, 5: 2349147, 11: 2349203, 3407: 2375020, 3408: 2384202, 3418: 2384372}
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | --------------------------------------------------
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | 
[2025-10-10 15:53:59] 2025-10-10 19:53:00,907 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 15:53:59] 2025-10-10 19:53:00,922 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 15:53:59] 2025-10-10 19:53:00,923 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 15:53:59] 2025-10-10 19:53:00,923 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 15:53:59] 2025-10-10 19:53:00,923 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 15:53:59] 2025-10-10 19:53:00,923 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 15:53:59] 2025-10-10 19:53:00,923 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 15:53:59] 2025-10-10 19:53:00,923 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 15:53:59] 2025-10-10 19:53:00,923 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 15:53:59] 2025-10-10 19:53:00,923 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 15:53:59] 2025-10-10 19:53:00,923 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 15:53:59] 2025-10-10 19:53:00,923 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 15:53:59] 2025-10-10 19:53:00,923 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 15:53:59] 2025-10-10 19:53:00,923 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 15:53:59] 2025-10-10 19:53:00,923 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 15:53:59] 2025-10-10 19:53:00,923 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 15:53:59] 2025-10-10 19:53:00,923 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 15:53:59] 2025-10-10 19:53:00,923 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 15:53:59] 2025-10-10 19:53:00,923 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 15:53:59] 2025-10-10 19:53:00,923 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 15:53:59] 2025-10-10 19:53:00,923 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 15:53:59] 2025-10-10 19:53:00,924 | INFO     | job 6837451367 has completed (purged errors)
[2025-10-10 15:53:59] 2025-10-10 19:53:00,924 | INFO     | overall cleanup function is called
[2025-10-10 15:53:59] 2025-10-10 19:53:01,934 | INFO     | --- collectZombieJob: --- 10, [2593044]
[2025-10-10 15:53:59] 2025-10-10 19:53:01,934 | INFO     | zombie collector waiting for pid 2593044
[2025-10-10 15:53:59] 2025-10-10 19:53:01,934 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 15:53:59] 2025-10-10 19:53:01,935 | INFO     | collected zombie processes
[2025-10-10 15:53:59] 2025-10-10 19:53:01,935 | INFO     | will attempt to kill all subprocesses of pid=2593044
[2025-10-10 15:53:59] 2025-10-10 19:53:02,497 | INFO     | process IDs to be killed: [2593044] (in reverse order)
[2025-10-10 15:53:59] 2025-10-10 19:53:02,662 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 15:53:59] 2025-10-10 19:53:02,663 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 15:53:59] 2025-10-10 19:53:02,689 | INFO     | did not find any defunct processes belonging to 2593044
[2025-10-10 15:53:59] 2025-10-10 19:53:02,713 | INFO     | did not find any defunct processes belonging to 2593044
[2025-10-10 15:53:59] 2025-10-10 19:53:02,713 | INFO     | ready for new job
[2025-10-10 15:53:59] 2025-10-10 19:53:02,713 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 15:53:59] 2025-10-10 19:53:02,714 | INFO     | ***************************************
[2025-10-10 15:53:59] 2025-10-10 19:53:02,714 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 15:53:59] 2025-10-10 19:53:02,714 | INFO     | ***************************************
[2025-10-10 15:53:59] 2025-10-10 19:53:02,714 | INFO     | 
[2025-10-10 15:53:59] 2025-10-10 19:53:02,732 | INFO     | architecture information:
[2025-10-10 15:53:59] 2025-10-10 19:53:02,733 | INFO     | executing command: cat /etc/os-release
[2025-10-10 15:53:59] 2025-10-10 19:53:02,745 | INFO     | cat /etc/os-release:
[2025-10-10 15:53:59] NAME="CentOS Linux"
[2025-10-10 15:53:59] VERSION="7 (Core)"
[2025-10-10 15:53:59] ID="centos"
[2025-10-10 15:53:59] ID_LIKE="rhel fedora"
[2025-10-10 15:53:59] VERSION_ID="7"
[2025-10-10 15:53:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 15:53:59] ANSI_COLOR="0;31"
[2025-10-10 15:53:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 15:53:59] HOME_URL="https://www.centos.org/"
[2025-10-10 15:53:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 15:53:59] 
[2025-10-10 15:53:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 15:53:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 15:53:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 15:53:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 15:53:59] 
[2025-10-10 15:53:59] 2025-10-10 19:53:02,745 | INFO     | ***************************************
[2025-10-10 15:53:59] 2025-10-10 19:53:03,248 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 15:53:59] 2025-10-10 19:53:03,265 | INFO     | sufficient remaining disk space (165793497088 B)
[2025-10-10 15:53:59] 2025-10-10 19:53:03,266 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 15:53:59] 2025-10-10 19:53:03,266 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 15:53:59] 2025-10-10 19:53:03,266 | INFO     | update_server=False
[2025-10-10 15:53:59] 2025-10-10 19:53:03,266 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 15:53:59] 2025-10-10 19:53:03,542 | INFO     | all data control threads have been joined
[2025-10-10 15:53:59] 2025-10-10 19:53:03,759 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 15:53:59] 2025-10-10 19:53:03,760 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 15:53:59] 2025-10-10 19:53:03,760 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 15:53:59] 2025-10-10 19:53:03,760 | INFO     | will abort loop
[2025-10-10 15:53:59] 2025-10-10 19:53:04,287 | INFO     | [job] retrieve thread has finished
[2025-10-10 15:53:59] 2025-10-10 19:53:04,303 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 15:53:59] 2025-10-10 19:53:04,351 | INFO     | [job] validate thread has finished
[2025-10-10 15:53:59] 2025-10-10 19:53:04,417 | INFO     | all payload control threads have been joined
[2025-10-10 15:53:59] 2025-10-10 19:53:04,423 | INFO     | [data] copytool_in thread has finished
[2025-10-10 15:53:59] 2025-10-10 19:53:04,546 | INFO     | [payload] failed_post thread has finished
[2025-10-10 15:53:59] 2025-10-10 19:53:04,548 | INFO     | [data] control thread has finished
[2025-10-10 15:53:59] 2025-10-10 19:53:04,562 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 15:53:59] 2025-10-10 19:53:04,721 | INFO     | all job control threads have been joined
[2025-10-10 15:53:59] 2025-10-10 19:53:04,768 | INFO     | [job] job monitor thread has finished
[2025-10-10 15:53:59] 2025-10-10 19:53:05,137 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 15:53:59] 2025-10-10 19:53:05,232 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 15:53:59] 2025-10-10 19:53:05,423 | INFO     | [payload] control thread has finished
[2025-10-10 15:53:59] 2025-10-10 19:53:05,549 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 15:53:59] 2025-10-10 19:53:05,727 | INFO     | [job] control thread has finished
[2025-10-10 15:53:59] 2025-10-10 19:53:05,750 | INFO     | [payload] validate_post thread has finished
[2025-10-10 15:53:59] 2025-10-10 19:53:06,310 | INFO     | [data] copytool_out thread has finished
[2025-10-10 15:53:59] 2025-10-10 19:53:06,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 15:53:59] 2025-10-10 19:53:06,555 | INFO     | [job] queue monitor thread has finished
[2025-10-10 15:53:59] 2025-10-10 19:53:10,389 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 15:53:59] 2025-10-10 19:53:14,284 | INFO     | job.realtimelogging is not enabled
[2025-10-10 15:53:59] 2025-10-10 19:53:15,290 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 15:53:59] 2025-10-10 19:53:33,985 | INFO     | PID=2584388 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 15:53:59] 2025-10-10 19:53:33,986 | INFO     | .. there are 39 such processes running
[2025-10-10 15:53:59] 2025-10-10 19:53:33,986 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 15:53:59] 2025-10-10 19:53:33,986 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 15:53:59] 2025-10-10 19:53:33,986 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 15:53:59] 2025-10-10 19:53:52,352 | INFO     | [monitor] cgroup control has ended
[2025-10-10 15:53:59] 2025-10-10 19:53:53,713 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139713004910400)>', '<ExcThread(monitor, started 139712358491904)>']
[2025-10-10 15:53:59] 2025-10-10 19:53:54,111 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 15:53:59] 2025-10-10 19:53:54,111 | INFO     | [monitor] control thread has ended
[2025-10-10 15:53:59] 2025-10-10 19:53:58,739 | INFO     | all workflow threads have been joined
[2025-10-10 15:53:59] 2025-10-10 19:53:58,739 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 15:53:59] 2025-10-10 19:53:58,740 | INFO     | traces error code: 0
[2025-10-10 15:53:59] 2025-10-10 19:53:58,740 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 15:53:59] 2025-10-10 19:53:58,835 [wrapper] ==== pilot stdout END ====
[2025-10-10 15:53:59] 2025-10-10 19:53:58,837 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 15:53:59] 2025-10-10 19:53:58,839 [wrapper] pilotpid: 2584388
[2025-10-10 15:53:59] 2025-10-10 19:53:58,841 [wrapper] Pilot exit status: 0
[2025-10-10 15:53:59] 2025-10-10 19:53:58,856 [wrapper] pandaids: 6837451367
[2025-10-10 15:53:59] 2025-10-10 19:53:58,972 [wrapper] cleanup supervisor_pilot 2871745 2584389
[2025-10-10 15:53:59] 2025-10-10 19:53:58,975 [wrapper] Test setup, not cleaning
[2025-10-10 15:53:59] 2025-10-10 19:53:58,980 [wrapper] apfmon messages muted
[2025-10-10 15:53:59] 2025-10-10 19:53:58,983 [wrapper] ==== wrapper stdout END ====
[2025-10-10 15:53:59] 2025-10-10 19:53:58,985 [wrapper] ==== wrapper stderr END ====
[2025-10-10 15:53:59]  *** Error codes and diagnostics ***
[2025-10-10 15:53:59]     "exeErrorCode": 0,
[2025-10-10 15:53:59]     "exeErrorDiag": "",
[2025-10-10 15:53:59]     "pilotErrorCode": 0,
[2025-10-10 15:53:59]     "pilotErrorDiag": "",
[2025-10-10 15:53:59]  *** Listing of results directory ***
[2025-10-10 15:53:59] total 414572
[2025-10-10 15:53:59] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 02:01 pilot3.tar.gz
[2025-10-10 15:53:59] -rwx------. 1 boincer umatlas     36292 Oct 10 02:03 runpilot2-wrapper.sh
[2025-10-10 15:53:59] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 02:03 queuedata.json
[2025-10-10 15:53:59] -rw-r--r--. 1 boincer umatlas       100 Oct 10 14:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 15:53:59] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 14:55 run_atlas
[2025-10-10 15:53:59] -rw-r--r--. 1 boincer umatlas       105 Oct 10 14:55 job.xml
[2025-10-10 15:53:59] -rw-r--r--. 2 boincer umatlas 221236479 Oct 10 14:55 EVNT.46676267._001362.pool.root.1
[2025-10-10 15:53:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 14:55 start_atlas.sh
[2025-10-10 15:53:59] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 14:55 shared
[2025-10-10 15:53:59] -rw-r--r--. 2 boincer umatlas    569680 Oct 10 14:55 input.tar.gz
[2025-10-10 15:53:59] -rw-r--r--. 1 boincer umatlas         0 Oct 10 14:55 boinc_lockfile
[2025-10-10 15:53:59] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 14:55 pandaJob.out
[2025-10-10 15:53:59] -rw-------. 1 boincer umatlas    975525 Oct 10 14:55 agis_schedconf.cvmfs.json
[2025-10-10 15:53:59] -rw-------. 1 boincer umatlas   1560580 Oct 10 14:55 agis_ddmendpoints.agis.ALL.json
[2025-10-10 15:53:59] drwx------. 5 boincer umatlas      4096 Oct 10 14:55 pilot3
[2025-10-10 15:53:59] -rw-r--r--. 1 boincer umatlas      7160 Oct 10 15:46 init_data.xml
[2025-10-10 15:53:59] -rw-------. 1 boincer umatlas 197736338 Oct 10 15:52 HITS.46676269._033464.pool.root.1
[2025-10-10 15:53:59] -rw-r--r--. 1 boincer umatlas       529 Oct 10 15:52 boinc_task_state.xml
[2025-10-10 15:53:59] -rw-------. 1 boincer umatlas      1030 Oct 10 15:52 memory_monitor_summary.json
[2025-10-10 15:53:59] -rw-------. 1 boincer umatlas        95 Oct 10 15:52 pilot_heartbeat.json
[2025-10-10 15:53:59] -rw-------. 1 boincer umatlas    324527 Oct 10 15:52 log.46676269._033464.job.log.tgz.1
[2025-10-10 15:53:59] -rw-------. 1 boincer umatlas      7769 Oct 10 15:53 heartbeat.json
[2025-10-10 15:53:59] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 15:53 boinc_mmap_file
[2025-10-10 15:53:59] -rw-r--r--. 1 boincer umatlas        27 Oct 10 15:53 wrapper_checkpoint.txt
[2025-10-10 15:53:59] -rw-------. 1 boincer umatlas      5083 Oct 10 15:53 pilotlog.txt
[2025-10-10 15:53:59] -rw-------. 1 boincer umatlas    501041 Oct 10 15:53 log.46676269._033464.job.log.1
[2025-10-10 15:53:59] -rw-------. 1 boincer umatlas       357 Oct 10 15:53 output.list
[2025-10-10 15:53:59] -rw-r--r--. 1 boincer umatlas       620 Oct 10 15:53 runtime_log
[2025-10-10 15:53:59] -rw-------. 1 boincer umatlas    839680 Oct 10 15:53 result.tar.gz
[2025-10-10 15:53:59] -rw-------. 1 boincer umatlas       650 Oct 10 15:53 yyzLDm3OLR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIXcNDm34pQfn.diag
[2025-10-10 15:53:59] -rw-r--r--. 1 boincer umatlas      8693 Oct 10 15:53 runtime_log.err
[2025-10-10 15:53:59] -rw-r--r--. 1 boincer umatlas     22402 Oct 10 15:53 stderr.txt
[2025-10-10 15:53:59] HITS file was successfully produced:
[2025-10-10 15:53:59] -rw-------. 1 boincer umatlas 197736338 Oct 10 15:52 shared/HITS.pool.root.1
[2025-10-10 15:53:59]  *** Contents of shared directory: ***
[2025-10-10 15:53:59] total 410556
[2025-10-10 15:53:59] -rw-r--r--. 2 boincer umatlas 221236479 Oct 10 14:55 ATLAS.root_0
[2025-10-10 15:53:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 14:55 start_atlas.sh
[2025-10-10 15:53:59] -rw-r--r--. 2 boincer umatlas    569680 Oct 10 14:55 input.tar.gz
[2025-10-10 15:53:59] -rw-------. 1 boincer umatlas 197736338 Oct 10 15:52 HITS.pool.root.1
[2025-10-10 15:53:59] -rw-------. 1 boincer umatlas    839680 Oct 10 15:53 result.tar.gz
15:54:00 (2578614): run_atlas exited; CPU time 23039.391092
15:54:00 (2578614): called boinc_finish(0)

</stderr_txt>
]]>

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