Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:20:18 (799181): wrapper (7.7.26015): starting
20:20:18 (799181): wrapper: running run_atlas (--nthreads 9)
[2025-10-10 20:20:18] Arguments: --nthreads 9
[2025-10-10 20:20:18] Threads: 9
[2025-10-10 20:20:18] Checking for CVMFS
[2025-10-10 20:20:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 20:20:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 20:20:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 20:20:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 20:20:20] 2.13.2.0 128630 109567 146824 151566 3 64 33645435 39288833 8884 16776704 0 62500441 99.698 45358771 34687 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 20:20:20] CVMFS is ok
[2025-10-10 20:20:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 20:20:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 20:20:20] Further information can be found at the LHC@home message board.
[2025-10-10 20:20:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 20:20:20] Checking for apptainer binary...
[2025-10-10 20:20:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 20:20:20] Running /usr/bin/apptainer --version
[2025-10-10 20:20:20] apptainer version 1.4.3-1.el9
[2025-10-10 20:20:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 20:20:20] c-210-14.aglt2.org
[2025-10-10 20:20:20] apptainer works
[2025-10-10 20:20:20] Set ATHENA_PROC_NUMBER=9
[2025-10-10 20:20:20] Set ATHENA_CORE_NUMBER=9
[2025-10-10 20:20:20] Starting ATLAS job with PandaID=6837557488
[2025-10-10 20:20:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 07:04:52]  *** The last 200 lines of the pilot log: ***
[2025-10-11 07:04:52] 2025-10-11 11:03:40,613 | INFO     | time since job start (38535s) is within the limit (172800.0s)
[2025-10-11 07:04:52] 2025-10-11 11:03:40,666 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 07:04:52] 2025-10-11 11:03:40,678 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2595.1794999999997
[2025-10-11 07:04:52] 2025-10-11 11:03:40,695 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837557488/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 07:04:52] 2025-10-11 11:03:40,696 | INFO     | extracted standard info from prmon json
[2025-10-11 07:04:52] 2025-10-11 11:03:40,696 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 07:04:52] 2025-10-11 11:03:40,697 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 07:04:52] 2025-10-11 11:03:40,702 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 07:04:52] 2025-10-11 11:03:40,702 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 07:04:52] 2025-10-11 11:03:40,728 | INFO     | fitting pss+swap vs Time
[2025-10-11 07:04:52] 2025-10-11 11:03:40,734 | INFO     | sum of square deviations: 77182739628.51509
[2025-10-11 07:04:52] 2025-10-11 11:03:40,790 | INFO     | sum of deviations: -51930345127.17003
[2025-10-11 07:04:52] 2025-10-11 11:03:40,790 | INFO     | mean x: 1760161375.5341814
[2025-10-11 07:04:52] 2025-10-11 11:03:40,790 | INFO     | mean y: 2566903.193958665
[2025-10-11 07:04:52] 2025-10-11 11:03:40,790 | INFO     | -- intersect: 1186844478.0888848
[2025-10-11 07:04:52] 2025-10-11 11:03:40,790 | INFO     | intersect: 1186844478.0888848
[2025-10-11 07:04:52] 2025-10-11 11:03:40,797 | INFO     | chi2: 3.402963211708299
[2025-10-11 07:04:52] 2025-10-11 11:03:40,798 | INFO     | sum of square deviations: 75357016132.42157
[2025-10-11 07:04:52] 2025-10-11 11:03:40,907 | INFO     | sum of deviations: -10919112677.251564
[2025-10-11 07:04:52] 2025-10-11 11:03:40,908 | INFO     | mean x: 1760161223.0304487
[2025-10-11 07:04:52] 2025-10-11 11:03:40,908 | INFO     | mean y: 2570307.434294872
[2025-10-11 07:04:52] 2025-10-11 11:03:40,908 | INFO     | -- intersect: 257614890.0200091
[2025-10-11 07:04:52] 2025-10-11 11:03:40,908 | INFO     | intersect: 257614890.0200091
[2025-10-11 07:04:52] 2025-10-11 11:03:40,928 | INFO     | chi2: 2.7167899911831954
[2025-10-11 07:04:52] 2025-10-11 11:03:40,929 | INFO     | current chi2=2.7167899911831954 (change=20.163991728275025 %)
[2025-10-11 07:04:52] 2025-10-11 11:03:40,929 | INFO     | right removable region: 623
[2025-10-11 07:04:52] 2025-10-11 11:03:40,930 | INFO     | sum of square deviations: 75356619196.14781
[2025-10-11 07:04:52] 2025-10-11 11:03:41,011 | INFO     | sum of deviations: -190578241486.85266
[2025-10-11 07:04:52] 2025-10-11 11:03:41,011 | INFO     | mean x: 1760161528.0544872
[2025-10-11 07:04:52] 2025-10-11 11:03:41,012 | INFO     | mean y: 2578458.0544871795
[2025-10-11 07:04:52] 2025-10-11 11:03:41,012 | INFO     | -- intersect: 4454058531.441108
[2025-10-11 07:04:52] 2025-10-11 11:03:41,012 | INFO     | intersect: 4454058531.441108
[2025-10-11 07:04:52] 2025-10-11 11:03:41,013 | INFO     | chi2: 1.36834526910614
[2025-10-11 07:04:52] 2025-10-11 11:03:41,013 | INFO     | current chi2=1.36834526910614 (change=59.78959559720817 %)
[2025-10-11 07:04:52] 2025-10-11 11:03:41,029 | INFO     | sum of square deviations: 73559636767.69312
[2025-10-11 07:04:52] 2025-10-11 11:03:41,120 | INFO     | sum of deviations: -222176092531.86865
[2025-10-11 07:04:52] 2025-10-11 11:03:41,121 | INFO     | mean x: 1760161680.5702746
[2025-10-11 07:04:52] 2025-10-11 11:03:41,121 | INFO     | mean y: 2581136.5831987076
[2025-10-11 07:04:52] 2025-10-11 11:03:41,121 | INFO     | -- intersect: 5318891297.934949
[2025-10-11 07:04:52] 2025-10-11 11:03:41,121 | INFO     | intersect: 5318891297.934949
[2025-10-11 07:04:52] 2025-10-11 11:03:41,170 | INFO     | chi2: 1.2533621643053858
[2025-10-11 07:04:52] 2025-10-11 11:03:41,170 | INFO     | current chi2=1.2533621643053858 (change=8.403076869324499 %)
[2025-10-11 07:04:52] 2025-10-11 11:03:41,170 | INFO     | left removable region: 20
[2025-10-11 07:04:52] 2025-10-11 11:03:41,171 | INFO     | sum of square deviations: 68002055892.68657
[2025-10-11 07:04:52] 2025-10-11 11:03:41,201 | INFO     | sum of deviations: -181415933640.32834
[2025-10-11 07:04:52] 2025-10-11 11:03:41,201 | INFO     | mean x: 1760161802.5820897
[2025-10-11 07:04:52] 2025-10-11 11:03:41,202 | INFO     | mean y: 2584827.006633499
[2025-10-11 07:04:52] 2025-10-11 11:03:41,202 | INFO     | -- intersect: 4698345750.432116
[2025-10-11 07:04:52] 2025-10-11 11:03:41,202 | INFO     | intersect: 4698345750.432116
[2025-10-11 07:04:52] 2025-10-11 11:03:41,203 | INFO     | chi2: 0.5363905473781879
[2025-10-11 07:04:52] 2025-10-11 11:03:41,204 | INFO     | -- intersect: 4698345750.432116
[2025-10-11 07:04:52] 2025-10-11 11:03:41,204 | INFO     | current memory leak: -2.67 B/s (using 603 data points, chi2=0.54)
[2025-10-11 07:04:52] 2025-10-11 11:03:41,206 | INFO     | could have reported an average CPU frequency of 2592 MHz (24 samples)
[2025-10-11 07:04:52] 2025-10-11 11:03:41,206 | INFO     | ..............................
[2025-10-11 07:04:52] 2025-10-11 11:03:41,206 | INFO     | . Timing measurements:
[2025-10-11 07:04:52] 2025-10-11 11:03:41,206 | INFO     | . get job = 0 s
[2025-10-11 07:04:52] 2025-10-11 11:03:41,206 | INFO     | . initial setup = 5 s
[2025-10-11 07:04:52] 2025-10-11 11:03:41,206 | INFO     | . payload setup = 29 s
[2025-10-11 07:04:52] 2025-10-11 11:03:41,206 | INFO     | . stage-in = 0 s
[2025-10-11 07:04:52] 2025-10-11 11:03:41,207 | INFO     | . payload execution = 38376 s
[2025-10-11 07:04:52] 2025-10-11 11:03:41,207 | INFO     | . stage-out = 8 s
[2025-10-11 07:04:52] 2025-10-11 11:03:41,207 | INFO     | . log creation = 2 s
[2025-10-11 07:04:52] 2025-10-11 11:03:41,207 | INFO     | ..............................
[2025-10-11 07:04:52] 2025-10-11 11:03:41,622 | INFO     | 
[2025-10-11 07:04:52] 2025-10-11 11:03:41,623 | INFO     | job summary report
[2025-10-11 07:04:52] 2025-10-11 11:03:41,623 | INFO     | --------------------------------------------------
[2025-10-11 07:04:52] 2025-10-11 11:03:41,623 | INFO     | PanDA job id: 6837557488
[2025-10-11 07:04:52] 2025-10-11 11:03:41,623 | INFO     | task id: 46676269
[2025-10-11 07:04:52] 2025-10-11 11:03:41,623 | INFO     | errors: (none)
[2025-10-11 07:04:52] 2025-10-11 11:03:41,623 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 07:04:52] 2025-10-11 11:03:41,623 | INFO     | pilot state: finished 
[2025-10-11 07:04:52] 2025-10-11 11:03:41,623 | INFO     | transexitcode: 0
[2025-10-11 07:04:52] 2025-10-11 11:03:41,624 | INFO     | exeerrorcode: 0
[2025-10-11 07:04:52] 2025-10-11 11:03:41,624 | INFO     | exeerrordiag: 
[2025-10-11 07:04:52] 2025-10-11 11:03:41,624 | INFO     | exitcode: 0
[2025-10-11 07:04:52] 2025-10-11 11:03:41,624 | INFO     | exitmsg: OK
[2025-10-11 07:04:52] 2025-10-11 11:03:41,624 | INFO     | cpuconsumptiontime: 56428 s
[2025-10-11 07:04:52] 2025-10-11 11:03:41,624 | INFO     | nevents: 400
[2025-10-11 07:04:52] 2025-10-11 11:03:41,624 | INFO     | neventsw: 0
[2025-10-11 07:04:52] 2025-10-11 11:03:41,624 | INFO     | pid: 811068
[2025-10-11 07:04:52] 2025-10-11 11:03:41,624 | INFO     | pgrp: 811068
[2025-10-11 07:04:52] 2025-10-11 11:03:41,715 | INFO     | corecount: 9
[2025-10-11 07:04:52] 2025-10-11 11:03:41,715 | INFO     | event service: False
[2025-10-11 07:04:52] 2025-10-11 11:03:41,715 | INFO     | sizes: {0: 2348023, 1: 2348708, 3: 2348708, 4: 2348736, 5: 2348736, 6: 2349119, 17: 2349119, 29: 2349147, 36: 2349437, 41: 2349465, 38411: 2390769, 38420: 2399767,
[2025-10-11 07:04:52] 2025-10-11 11:03:41,715 | INFO     | --------------------------------------------------
[2025-10-11 07:04:52] 2025-10-11 11:03:41,715 | INFO     | 
[2025-10-11 07:04:52] 2025-10-11 11:03:41,715 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 07:04:52] 2025-10-11 11:03:42,058 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 07:04:52] 2025-10-11 11:03:42,058 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 07:04:52] 2025-10-11 11:03:42,059 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 07:04:52] 2025-10-11 11:03:42,059 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 07:04:52] 2025-10-11 11:03:42,059 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 07:04:52] 2025-10-11 11:03:42,059 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 07:04:52] 2025-10-11 11:03:42,059 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 07:04:52] 2025-10-11 11:03:42,059 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 07:04:52] 2025-10-11 11:03:42,059 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 07:04:52] 2025-10-11 11:03:42,060 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 07:04:52] 2025-10-11 11:03:42,060 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 07:04:52] 2025-10-11 11:03:42,060 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 07:04:52] 2025-10-11 11:03:42,060 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 07:04:52] 2025-10-11 11:03:42,060 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 07:04:52] 2025-10-11 11:03:42,060 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 07:04:52] 2025-10-11 11:03:42,060 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 07:04:52] 2025-10-11 11:03:42,061 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 07:04:52] 2025-10-11 11:03:42,061 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 07:04:52] 2025-10-11 11:03:42,061 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 07:04:52] 2025-10-11 11:03:42,061 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 07:04:52] 2025-10-11 11:03:42,061 | INFO     | job 6837557488 has completed (purged errors)
[2025-10-11 07:04:52] 2025-10-11 11:03:42,165 | INFO     | overall cleanup function is called
[2025-10-11 07:04:52] 2025-10-11 11:03:42,852 | INFO     | PID=803003 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 07:04:52] 2025-10-11 11:03:42,852 | INFO     | .. there are 8 such processes running
[2025-10-11 07:04:52] 2025-10-11 11:03:43,206 | INFO     | --- collectZombieJob: --- 10, [811068]
[2025-10-11 07:04:52] 2025-10-11 11:03:43,207 | INFO     | zombie collector waiting for pid 811068
[2025-10-11 07:04:52] 2025-10-11 11:03:43,207 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 07:04:52] 2025-10-11 11:03:43,207 | INFO     | collected zombie processes
[2025-10-11 07:04:52] 2025-10-11 11:03:43,207 | INFO     | will attempt to kill all subprocesses of pid=811068
[2025-10-11 07:04:52] 2025-10-11 11:03:43,530 | INFO     | process IDs to be killed: [811068] (in reverse order)
[2025-10-11 07:04:52] 2025-10-11 11:03:43,919 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 07:04:52] 2025-10-11 11:03:43,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 07:04:52] 2025-10-11 11:03:44,011 | INFO     | did not find any defunct processes belonging to 811068
[2025-10-11 07:04:52] 2025-10-11 11:03:44,069 | INFO     | did not find any defunct processes belonging to 811068
[2025-10-11 07:04:52] 2025-10-11 11:03:44,070 | INFO     | ready for new job
[2025-10-11 07:04:52] 2025-10-11 11:03:44,070 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 07:04:52] 2025-10-11 11:03:44,103 | INFO     | ***************************************
[2025-10-11 07:04:52] 2025-10-11 11:03:44,103 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 07:04:52] 2025-10-11 11:03:44,103 | INFO     | ***************************************
[2025-10-11 07:04:52] 2025-10-11 11:03:44,104 | INFO     | 
[2025-10-11 07:04:52] 2025-10-11 11:03:44,118 | INFO     | architecture information:
[2025-10-11 07:04:52] 2025-10-11 11:03:44,142 | INFO     | executing command: cat /etc/os-release
[2025-10-11 07:04:52] 2025-10-11 11:03:44,317 | INFO     | cat /etc/os-release:
[2025-10-11 07:04:52] NAME="CentOS Linux"
[2025-10-11 07:04:52] VERSION="7 (Core)"
[2025-10-11 07:04:52] ID="centos"
[2025-10-11 07:04:52] ID_LIKE="rhel fedora"
[2025-10-11 07:04:52] VERSION_ID="7"
[2025-10-11 07:04:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 07:04:52] ANSI_COLOR="0;31"
[2025-10-11 07:04:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 07:04:52] HOME_URL="https://www.centos.org/"
[2025-10-11 07:04:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 07:04:52] 
[2025-10-11 07:04:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 07:04:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 07:04:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 07:04:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 07:04:52] 
[2025-10-11 07:04:52] 2025-10-11 11:03:44,317 | INFO     | ***************************************
[2025-10-11 07:04:52] 2025-10-11 11:03:44,821 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 07:04:52] 2025-10-11 11:03:44,967 | INFO     | sufficient remaining disk space (52513734656 B)
[2025-10-11 07:04:52] 2025-10-11 11:03:44,968 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 07:04:52] 2025-10-11 11:03:44,968 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 07:04:52] 2025-10-11 11:03:44,968 | INFO     | update_server=False
[2025-10-11 07:04:52] 2025-10-11 11:03:44,968 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 07:04:52] 2025-10-11 11:03:44,969 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:04:52] 2025-10-11 11:03:44,970 | INFO     | aborting loop
[2025-10-11 07:04:52] 2025-10-11 11:03:44,979 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 07:04:52] 2025-10-11 11:03:45,201 | INFO     | all job control threads have been joined
[2025-10-11 07:04:52] 2025-10-11 11:03:45,388 | INFO     | all data control threads have been joined
[2025-10-11 07:04:52] 2025-10-11 11:03:45,830 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 07:04:52] 2025-10-11 11:03:45,975 | INFO     | [job] retrieve thread has finished
[2025-10-11 07:04:52] 2025-10-11 11:03:45,976 | INFO     | [job] job monitor thread has finished
[2025-10-11 07:04:52] 2025-10-11 11:03:46,038 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 07:04:52] 2025-10-11 11:03:46,208 | INFO     | [job] control thread has finished
[2025-10-11 07:04:52] 2025-10-11 11:03:46,319 | INFO     | [job] validate thread has finished
[2025-10-11 07:04:52] 2025-10-11 11:03:46,386 | INFO     | [payload] failed_post thread has finished
[2025-10-11 07:04:52] 2025-10-11 11:03:46,394 | INFO     | [data] control thread has finished
[2025-10-11 07:04:52] 2025-10-11 11:03:46,420 | INFO     | all payload control threads have been joined
[2025-10-11 07:04:52] 2025-10-11 11:03:46,423 | INFO     | [data] copytool_in thread has finished
[2025-10-11 07:04:52] 2025-10-11 11:03:46,552 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 07:04:52] 2025-10-11 11:03:46,599 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 07:04:52] 2025-10-11 11:03:46,641 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:04:52] 2025-10-11 11:03:46,683 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 07:04:52] 2025-10-11 11:03:46,881 | INFO     | [payload] validate_post thread has finished
[2025-10-11 07:04:52] 2025-10-11 11:03:46,991 | INFO     | [data] copytool_out thread has finished
[2025-10-11 07:04:52] 2025-10-11 11:03:47,426 | INFO     | [payload] control thread has finished
[2025-10-11 07:04:52] 2025-10-11 11:03:47,647 | INFO     | [job] queue monitor thread has finished
[2025-10-11 07:04:52] 2025-10-11 11:03:49,845 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 07:04:52] 2025-10-11 11:04:18,852 | INFO     | PID=803003 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 07:04:52] 2025-10-11 11:04:18,852 | INFO     | .. there are 8 such processes running
[2025-10-11 07:04:52] 2025-10-11 11:04:18,852 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 07:04:52] 2025-10-11 11:04:18,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 07:04:52] 2025-10-11 11:04:18,853 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 07:04:52] 2025-10-11 11:04:42,211 | INFO     | [monitor] cgroup control has ended
[2025-10-11 07:04:52] 2025-10-11 11:04:43,358 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139795181733696)>', '<ExcThread(monitor, started 139794306807552)>']
[2025-10-11 07:04:52] 2025-10-11 11:04:44,036 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 07:04:52] 2025-10-11 11:04:44,037 | INFO     | [monitor] control thread has ended
[2025-10-11 07:04:52] 2025-10-11 11:04:48,387 | INFO     | all workflow threads have been joined
[2025-10-11 07:04:52] 2025-10-11 11:04:48,387 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 07:04:52] 2025-10-11 11:04:48,412 | INFO     | traces error code: 0
[2025-10-11 07:04:52] 2025-10-11 11:04:48,412 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 07:04:52] 2025-10-11 11:04:49,190 [wrapper] ==== pilot stdout END ====
[2025-10-11 07:04:52] 2025-10-11 11:04:49,281 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 07:04:52] 2025-10-11 11:04:49,337 [wrapper] pilotpid: 803003
[2025-10-11 07:04:52] 2025-10-11 11:04:49,392 [wrapper] Pilot exit status: 0
[2025-10-11 07:04:52] 2025-10-11 11:04:50,005 [wrapper] pandaids: 6837557488
[2025-10-11 07:04:52] 2025-10-11 11:04:50,756 [wrapper] cleanup supervisor_pilot 1632352 803004
[2025-10-11 07:04:52] 2025-10-11 11:04:50,802 [wrapper] Test setup, not cleaning
[2025-10-11 07:04:52] 2025-10-11 11:04:50,850 [wrapper] apfmon messages muted
[2025-10-11 07:04:52] 2025-10-11 11:04:50,928 [wrapper] ==== wrapper stdout END ====
[2025-10-11 07:04:52] 2025-10-11 11:04:50,989 [wrapper] ==== wrapper stderr END ====
[2025-10-11 07:04:52]  *** Error codes and diagnostics ***
[2025-10-11 07:04:52]     "exeErrorCode": 0,
[2025-10-11 07:04:52]     "exeErrorDiag": "",
[2025-10-11 07:04:52]     "pilotErrorCode": 0,
[2025-10-11 07:04:52]     "pilotErrorDiag": "",
[2025-10-11 07:04:52]  *** Listing of results directory ***
[2025-10-11 07:04:52] total 414264
[2025-10-11 07:04:52] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 05:06 pilot3.tar.gz
[2025-10-11 07:04:52] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 05:34 queuedata.json
[2025-10-11 07:04:52] -rwx------. 1 boincer umatlas     36292 Oct 10 05:36 runpilot2-wrapper.sh
[2025-10-11 07:04:52] -rw-r--r--. 1 boincer umatlas       100 Oct 10 20:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 07:04:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 20:20 run_atlas
[2025-10-11 07:04:52] -rw-r--r--. 1 boincer umatlas       105 Oct 10 20:20 job.xml
[2025-10-11 07:04:52] -rw-r--r--. 2 boincer umatlas 218517173 Oct 10 20:20 EVNT.46676267._001477.pool.root.1
[2025-10-11 07:04:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 20:20 start_atlas.sh
[2025-10-11 07:04:52] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 20:20 shared
[2025-10-11 07:04:52] -rw-r--r--. 2 boincer umatlas    569681 Oct 10 20:20 input.tar.gz
[2025-10-11 07:04:52] -rw-r--r--. 1 boincer umatlas         0 Oct 10 20:20 boinc_lockfile
[2025-10-11 07:04:52] -rw-r--r--. 1 boincer umatlas      2547 Oct 10 20:20 pandaJob.out
[2025-10-11 07:04:52] -rw-------. 1 boincer umatlas    975525 Oct 10 20:21 agis_schedconf.cvmfs.json
[2025-10-11 07:04:52] drwx------. 5 boincer umatlas      4096 Oct 10 20:21 pilot3
[2025-10-11 07:04:52] -rw-------. 1 boincer umatlas 191441175 Oct 11 07:01 HITS.46676269._036336.pool.root.1
[2025-10-11 07:04:52] -rw-r--r--. 1 boincer umatlas       531 Oct 11 07:01 boinc_task_state.xml
[2025-10-11 07:04:52] -rw-r--r--. 1 boincer umatlas      6660 Oct 11 07:01 init_data.xml
[2025-10-11 07:04:52] -rw-------. 1 boincer umatlas      1041 Oct 11 07:02 memory_monitor_summary.json
[2025-10-11 07:04:52] -rw-------. 1 boincer umatlas   1560580 Oct 11 07:02 agis_ddmendpoints.agis.ALL.json
[2025-10-11 07:04:52] -rw-------. 1 boincer umatlas    735897 Oct 11 07:03 log.46676269._036336.job.log.tgz.1
[2025-10-11 07:04:52] -rw-------. 1 boincer umatlas        95 Oct 11 07:03 pilot_heartbeat.json
[2025-10-11 07:04:52] -rw-------. 1 boincer umatlas      7827 Oct 11 07:03 heartbeat.json
[2025-10-11 07:04:52] -rw-------. 1 boincer umatlas      4822 Oct 11 07:04 pilotlog.txt
[2025-10-11 07:04:52] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 07:04 boinc_mmap_file
[2025-10-11 07:04:52] -rw-r--r--. 1 boincer umatlas        28 Oct 11 07:04 wrapper_checkpoint.txt
[2025-10-11 07:04:52] -rw-------. 1 boincer umatlas   4440051 Oct 11 07:04 log.46676269._036336.job.log.1
[2025-10-11 07:04:52] -rw-------. 1 boincer umatlas       357 Oct 11 07:04 output.list
[2025-10-11 07:04:52] -rw-r--r--. 1 boincer umatlas       620 Oct 11 07:04 runtime_log
[2025-10-11 07:04:52] -rw-------. 1 boincer umatlas   5191680 Oct 11 07:04 result.tar.gz
[2025-10-11 07:04:52] -rw-r--r--. 1 boincer umatlas      8704 Oct 11 07:04 runtime_log.err
[2025-10-11 07:04:52] -rw-------. 1 boincer umatlas       658 Oct 11 07:04 2Y7NDm9iOR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZycNDmSZnX7m.diag
[2025-10-11 07:04:52] -rw-r--r--. 1 boincer umatlas     21293 Oct 11 07:04 stderr.txt
[2025-10-11 07:04:52] HITS file was successfully produced:
[2025-10-11 07:04:52] -rw-------. 1 boincer umatlas 191441175 Oct 11 07:01 shared/HITS.pool.root.1
[2025-10-11 07:04:52]  *** Contents of shared directory: ***
[2025-10-11 07:04:52] total 406004
[2025-10-11 07:04:52] -rw-r--r--. 2 boincer umatlas 218517173 Oct 10 20:20 ATLAS.root_0
[2025-10-11 07:04:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 20:20 start_atlas.sh
[2025-10-11 07:04:52] -rw-r--r--. 2 boincer umatlas    569681 Oct 10 20:20 input.tar.gz
[2025-10-11 07:04:52] -rw-------. 1 boincer umatlas 191441175 Oct 11 07:01 HITS.pool.root.1
[2025-10-11 07:04:52] -rw-------. 1 boincer umatlas   5191680 Oct 11 07:04 result.tar.gz
07:04:53 (799181): run_atlas exited; CPU time 57298.415331
07:04:53 (799181): called boinc_finish(0)

</stderr_txt>
]]>

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