Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:45:39 (631275): wrapper (7.7.26015): starting
14:45:39 (631275): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 14:45:39] Arguments: --nthreads 8
[2025-10-10 14:45:39] Threads: 8
[2025-10-10 14:45:39] Checking for CVMFS
[2025-10-10 14:45:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 14:45:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 14:45:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 14:45:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 14:45:39] 2.13.2.0 21981 50379 154632 151558 2 454 32641551 40960001 11723 16776704 0 42350796 99.718 31857660 34442 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 14:45:39] CVMFS is ok
[2025-10-10 14:45:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 14:45:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 14:45:39] Further information can be found at the LHC@home message board.
[2025-10-10 14:45:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 14:45:39] Checking for apptainer binary...
[2025-10-10 14:45:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 14:45:39] Running /usr/bin/apptainer --version
[2025-10-10 14:45:39] apptainer version 1.4.3-1.el9
[2025-10-10 14:45:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 14:45:40] c-211-7.aglt2.org
[2025-10-10 14:45:40] apptainer works
[2025-10-10 14:45:40] Set ATHENA_PROC_NUMBER=8
[2025-10-10 14:45:40] Set ATHENA_CORE_NUMBER=8
[2025-10-10 14:45:40] Starting ATLAS job with PandaID=6838911992
[2025-10-10 14:45:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 22:03:53]  *** The last 200 lines of the pilot log: ***
[2025-10-10 22:04:12] 2025-10-11 02:02:45,279 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 22:04:12] 2025-10-11 02:02:45,280 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 22:04:12] 2025-10-11 02:02:45,465 | INFO     | fitting pss+swap vs Time
[2025-10-10 22:04:12] 2025-10-11 02:02:45,466 | INFO     | sum of square deviations: 24309663462.54902
[2025-10-10 22:04:12] 2025-10-11 02:02:45,566 | INFO     | sum of deviations: 263038964032.7147
[2025-10-10 22:04:12] 2025-10-11 02:02:45,567 | INFO     | mean x: 1760135019.8294392
[2025-10-10 22:04:12] 2025-10-11 02:02:45,567 | INFO     | mean y: 2454907.228971963
[2025-10-10 22:04:12] 2025-10-11 02:02:45,609 | INFO     | -- intersect: -19042814595.859848
[2025-10-10 22:04:12] 2025-10-11 02:02:45,610 | INFO     | intersect: -19042814595.859848
[2025-10-10 22:04:12] 2025-10-11 02:02:45,611 | INFO     | chi2: 4.701282167444359
[2025-10-10 22:04:12] 2025-10-11 02:02:45,612 | INFO     | sum of square deviations: 23467666792.978497
[2025-10-10 22:04:12] 2025-10-11 02:02:45,632 | INFO     | sum of deviations: 287075205425.63837
[2025-10-10 22:04:12] 2025-10-11 02:02:45,632 | INFO     | mean x: 1760134867.3404255
[2025-10-10 22:04:12] 2025-10-11 02:02:45,632 | INFO     | mean y: 2459213.120567376
[2025-10-10 22:04:12] 2025-10-11 02:02:45,633 | INFO     | -- intersect: -21528913422.94243
[2025-10-10 22:04:12] 2025-10-11 02:02:45,633 | INFO     | intersect: -21528913422.94243
[2025-10-10 22:04:12] 2025-10-11 02:02:45,634 | INFO     | chi2: 3.9831302557313757
[2025-10-10 22:04:12] 2025-10-11 02:02:45,634 | INFO     | current chi2=3.9831302557313757 (change=15.27566068435697 %)
[2025-10-10 22:04:12] 2025-10-11 02:02:45,634 | INFO     | right removable region: 422
[2025-10-10 22:04:12] 2025-10-11 02:02:45,635 | INFO     | sum of square deviations: 23467371793.607517
[2025-10-10 22:04:12] 2025-10-11 02:02:45,650 | INFO     | sum of deviations: 145929335831.20102
[2025-10-10 22:04:12] 2025-10-11 02:02:45,650 | INFO     | mean x: 1760135172.3451536
[2025-10-10 22:04:12] 2025-10-11 02:02:45,650 | INFO     | mean y: 2476089.293144208
[2025-10-10 22:04:12] 2025-10-11 02:02:45,651 | INFO     | -- intersect: -10942735796.063011
[2025-10-10 22:04:12] 2025-10-11 02:02:45,651 | INFO     | intersect: -10942735796.063011
[2025-10-10 22:04:12] 2025-10-11 02:02:45,652 | INFO     | chi2: 1.8928721878716535
[2025-10-10 22:04:12] 2025-10-11 02:02:45,652 | INFO     | current chi2=1.8928721878716535 (change=59.73710744316739 %)
[2025-10-10 22:04:12] 2025-10-11 02:02:45,653 | INFO     | sum of square deviations: 22644754911.952072
[2025-10-10 22:04:12] 2025-10-11 02:02:45,666 | INFO     | sum of deviations: 94365935304.78474
[2025-10-10 22:04:12] 2025-10-11 02:02:45,667 | INFO     | mean x: 1760135324.861244
[2025-10-10 22:04:12] 2025-10-11 02:02:45,667 | INFO     | mean y: 2485628.875598086
[2025-10-10 22:04:12] 2025-10-11 02:02:45,667 | INFO     | -- intersect: -7332405688.753778
[2025-10-10 22:04:12] 2025-10-11 02:02:45,667 | INFO     | intersect: -7332405688.753778
[2025-10-10 22:04:12] 2025-10-11 02:02:45,668 | INFO     | chi2: 1.34288358588255
[2025-10-10 22:04:12] 2025-10-11 02:02:45,672 | INFO     | current chi2=1.34288358588255 (change=29.05577067025909 %)
[2025-10-10 22:04:12] 2025-10-11 02:02:45,673 | INFO     | sum of square deviations: 21841580255.07498
[2025-10-10 22:04:12] 2025-10-11 02:02:45,682 | INFO     | sum of deviations: 58150548149.73364
[2025-10-10 22:04:12] 2025-10-11 02:02:45,682 | INFO     | mean x: 1760135477.377724
[2025-10-10 22:04:12] 2025-10-11 02:02:45,682 | INFO     | mean y: 2492504.014527845
[2025-10-10 22:04:12] 2025-10-11 02:02:45,682 | INFO     | -- intersect: -4683653902.609399
[2025-10-10 22:04:12] 2025-10-11 02:02:45,683 | INFO     | intersect: -4683653902.609399
[2025-10-10 22:04:12] 2025-10-11 02:02:45,683 | INFO     | chi2: 1.1075660585488847
[2025-10-10 22:04:12] 2025-10-11 02:02:45,684 | INFO     | current chi2=1.1075660585488847 (change=17.523300590424114 %)
[2025-10-10 22:04:12] 2025-10-11 02:02:45,684 | INFO     | left removable region: 30
[2025-10-10 22:04:12] 2025-10-11 02:02:45,688 | INFO     | sum of square deviations: 18675819975.14037
[2025-10-10 22:04:12] 2025-10-11 02:02:45,696 | INFO     | sum of deviations: 25694533852.12505
[2025-10-10 22:04:12] 2025-10-11 02:02:45,697 | INFO     | mean x: 1760135751.9311225
[2025-10-10 22:04:12] 2025-10-11 02:02:45,697 | INFO     | mean y: 2509147.375
[2025-10-10 22:04:12] 2025-10-11 02:02:45,697 | INFO     | -- intersect: -2419117732.865362
[2025-10-10 22:04:12] 2025-10-11 02:02:45,697 | INFO     | intersect: -2419117732.865362
[2025-10-10 22:04:12] 2025-10-11 02:02:45,698 | INFO     | chi2: 0.14911189264941266
[2025-10-10 22:04:12] 2025-10-11 02:02:45,698 | INFO     | -- intersect: -2419117732.865362
[2025-10-10 22:04:12] 2025-10-11 02:02:45,698 | INFO     | current memory leak: 1.38 B/s (using 392 data points, chi2=0.15)
[2025-10-10 22:04:12] 2025-10-11 02:02:45,704 | INFO     | could have reported an average CPU frequency of 2460 MHz (18 samples)
[2025-10-10 22:04:12] 2025-10-11 02:02:45,704 | INFO     | ..............................
[2025-10-10 22:04:12] 2025-10-11 02:02:45,704 | INFO     | . Timing measurements:
[2025-10-10 22:04:12] 2025-10-11 02:02:45,704 | INFO     | . get job = 0 s
[2025-10-10 22:04:12] 2025-10-11 02:02:45,704 | INFO     | . initial setup = 3 s
[2025-10-10 22:04:12] 2025-10-11 02:02:45,704 | INFO     | . payload setup = 11 s
[2025-10-10 22:04:12] 2025-10-11 02:02:45,705 | INFO     | . stage-in = 0 s
[2025-10-10 22:04:12] 2025-10-11 02:02:45,705 | INFO     | . payload execution = 26106 s
[2025-10-10 22:04:12] 2025-10-11 02:02:45,705 | INFO     | . stage-out = 13 s
[2025-10-10 22:04:12] 2025-10-11 02:02:45,705 | INFO     | . log creation = 3 s
[2025-10-10 22:04:12] 2025-10-11 02:02:45,705 | INFO     | ..............................
[2025-10-10 22:04:12] 2025-10-11 02:02:45,854 | INFO     | time since job start (26209s) is within the limit (172800.0s)
[2025-10-10 22:04:12] 2025-10-11 02:02:46,627 | INFO     | 
[2025-10-10 22:04:12] 2025-10-11 02:02:46,627 | INFO     | job summary report
[2025-10-10 22:04:12] 2025-10-11 02:02:46,628 | INFO     | --------------------------------------------------
[2025-10-10 22:04:12] 2025-10-11 02:02:46,628 | INFO     | PanDA job id: 6838911992
[2025-10-10 22:04:12] 2025-10-11 02:02:46,628 | INFO     | task id: 46376905
[2025-10-10 22:04:12] 2025-10-11 02:02:46,628 | INFO     | errors: (none)
[2025-10-10 22:04:12] 2025-10-11 02:02:46,628 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 22:04:12] 2025-10-11 02:02:46,628 | INFO     | pilot state: finished 
[2025-10-10 22:04:12] 2025-10-11 02:02:46,628 | INFO     | transexitcode: 0
[2025-10-10 22:04:12] 2025-10-11 02:02:46,628 | INFO     | exeerrorcode: 0
[2025-10-10 22:04:12] 2025-10-11 02:02:46,629 | INFO     | exeerrordiag: 
[2025-10-10 22:04:12] 2025-10-11 02:02:46,629 | INFO     | exitcode: 0
[2025-10-10 22:04:12] 2025-10-11 02:02:46,629 | INFO     | exitmsg: OK
[2025-10-10 22:04:12] 2025-10-11 02:02:46,629 | INFO     | cpuconsumptiontime: 55506 s
[2025-10-10 22:04:12] 2025-10-11 02:02:46,629 | INFO     | nevents: 400
[2025-10-10 22:04:12] 2025-10-11 02:02:46,629 | INFO     | neventsw: 0
[2025-10-10 22:04:12] 2025-10-11 02:02:46,629 | INFO     | pid: 641678
[2025-10-10 22:04:12] 2025-10-11 02:02:46,629 | INFO     | pgrp: 641678
[2025-10-10 22:04:12] 2025-10-11 02:02:46,630 | INFO     | corecount: 8
[2025-10-10 22:04:12] 2025-10-11 02:02:46,630 | INFO     | event service: False
[2025-10-10 22:04:12] 2025-10-11 02:02:46,630 | INFO     | sizes: {0: 2347937, 1: 2348793, 2: 2348793, 8: 2349083, 12: 2349111, 26126: 2385209, 26127: 2385336, 26144: 2394390, 26146: 2394446, 26190: 2394640}
[2025-10-10 22:04:12] 2025-10-11 02:02:46,630 | INFO     | --------------------------------------------------
[2025-10-10 22:04:12] 2025-10-11 02:02:46,630 | INFO     | 
[2025-10-10 22:04:12] 2025-10-11 02:02:46,630 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-10 22:04:12] 2025-10-11 02:02:46,788 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 22:04:12] 2025-10-11 02:02:46,789 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 22:04:12] 2025-10-11 02:02:46,789 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 22:04:12] 2025-10-11 02:02:46,789 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 22:04:12] 2025-10-11 02:02:46,789 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 22:04:12] 2025-10-11 02:02:46,789 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 22:04:12] 2025-10-11 02:02:46,789 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 22:04:12] 2025-10-11 02:02:46,789 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 22:04:12] 2025-10-11 02:02:46,790 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 22:04:12] 2025-10-11 02:02:46,790 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 22:04:12] 2025-10-11 02:02:46,790 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 22:04:12] 2025-10-11 02:02:46,790 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 22:04:12] 2025-10-11 02:02:46,790 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 22:04:12] 2025-10-11 02:02:46,790 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 22:04:12] 2025-10-11 02:02:46,790 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 22:04:12] 2025-10-11 02:02:46,790 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 22:04:12] 2025-10-11 02:02:46,791 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 22:04:12] 2025-10-11 02:02:46,791 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 22:04:12] 2025-10-11 02:02:46,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 22:04:12] 2025-10-11 02:02:46,874 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 22:04:12] 2025-10-11 02:02:46,874 | INFO     | job 6838911992 has completed (purged errors)
[2025-10-10 22:04:12] 2025-10-11 02:02:46,874 | INFO     | overall cleanup function is called
[2025-10-10 22:04:12] 2025-10-11 02:02:47,918 | INFO     | --- collectZombieJob: --- 10, [641678]
[2025-10-10 22:04:12] 2025-10-11 02:02:47,918 | INFO     | zombie collector waiting for pid 641678
[2025-10-10 22:04:12] 2025-10-11 02:02:47,919 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 22:04:12] 2025-10-11 02:02:47,919 | INFO     | collected zombie processes
[2025-10-10 22:04:12] 2025-10-11 02:02:47,919 | INFO     | will attempt to kill all subprocesses of pid=641678
[2025-10-10 22:04:12] 2025-10-11 02:02:50,078 | INFO     | process IDs to be killed: [641678] (in reverse order)
[2025-10-10 22:04:12] 2025-10-11 02:02:50,620 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 22:04:12] 2025-10-11 02:02:50,621 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 22:04:12] 2025-10-11 02:02:50,701 | INFO     | did not find any defunct processes belonging to 641678
[2025-10-10 22:04:12] 2025-10-11 02:02:50,711 | INFO     | did not find any defunct processes belonging to 641678
[2025-10-10 22:04:12] 2025-10-11 02:02:50,712 | INFO     | ready for new job
[2025-10-10 22:04:12] 2025-10-11 02:02:50,712 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 22:04:12] 2025-10-11 02:02:50,761 | INFO     | ***************************************
[2025-10-10 22:04:12] 2025-10-11 02:02:50,762 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 22:04:12] 2025-10-11 02:02:50,762 | INFO     | ***************************************
[2025-10-10 22:04:12] 2025-10-11 02:02:50,762 | INFO     | 
[2025-10-10 22:04:12] 2025-10-11 02:02:50,807 | INFO     | architecture information:
[2025-10-10 22:04:12] 2025-10-11 02:02:50,829 | INFO     | executing command: cat /etc/os-release
[2025-10-10 22:04:12] 2025-10-11 02:02:51,006 | INFO     | cat /etc/os-release:
[2025-10-10 22:04:12] NAME="CentOS Linux"
[2025-10-10 22:04:12] VERSION="7 (Core)"
[2025-10-10 22:04:12] ID="centos"
[2025-10-10 22:04:12] ID_LIKE="rhel fedora"
[2025-10-10 22:04:12] VERSION_ID="7"
[2025-10-10 22:04:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 22:04:12] ANSI_COLOR="0;31"
[2025-10-10 22:04:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 22:04:12] HOME_URL="https://www.centos.org/"
[2025-10-10 22:04:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 22:04:12] 
[2025-10-10 22:04:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 22:04:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 22:04:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 22:04:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 22:04:12] 
[2025-10-10 22:04:12] 2025-10-11 02:02:51,007 | INFO     | ***************************************
[2025-10-10 22:04:12] 2025-10-11 02:02:51,517 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-10 22:04:12] 2025-10-11 02:02:51,760 | INFO     | sufficient remaining disk space (63350767616 B)
[2025-10-10 22:04:12] 2025-10-11 02:02:51,761 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 22:04:12] 2025-10-11 02:02:51,761 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 22:04:12] 2025-10-11 02:02:51,761 | INFO     | update_server=False
[2025-10-10 22:04:12] 2025-10-11 02:02:51,762 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 22:04:12] 2025-10-11 02:02:51,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 22:04:12] 2025-10-11 02:02:51,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 22:04:12] 2025-10-11 02:02:51,767 | INFO     | aborting loop
[2025-10-10 22:04:12] 2025-10-11 02:02:51,769 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 22:04:12] 2025-10-11 02:02:52,016 | INFO     | all data control threads have been joined
[2025-10-10 22:04:12] 2025-10-11 02:02:52,701 | INFO     | all payload control threads have been joined
[2025-10-10 22:04:12] 2025-10-11 02:02:52,767 | INFO     | [job] retrieve thread has finished
[2025-10-10 22:04:12] 2025-10-11 02:02:52,782 | INFO     | [job] job monitor thread has finished
[2025-10-10 22:04:12] 2025-10-11 02:02:52,814 | INFO     | [job] queue monitor thread has finished
[2025-10-10 22:04:12] 2025-10-11 02:02:53,035 | INFO     | [data] control thread has finished
[2025-10-10 22:04:12] 2025-10-11 02:02:53,116 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 22:04:12] 2025-10-11 02:02:53,206 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 22:04:12] 2025-10-11 02:02:53,356 | INFO     | all job control threads have been joined
[2025-10-10 22:04:12] 2025-10-11 02:02:53,612 | INFO     | [payload] failed_post thread has finished
[2025-10-10 22:04:12] 2025-10-11 02:02:53,707 | INFO     | [payload] control thread has finished
[2025-10-10 22:04:12] 2025-10-11 02:02:53,774 | INFO     | [data] copytool_out thread has finished
[2025-10-10 22:04:12] 2025-10-11 02:02:53,777 | INFO     | [payload] validate_post thread has finished
[2025-10-10 22:04:12] 2025-10-11 02:02:53,849 | INFO     | [job] validate thread has finished
[2025-10-10 22:04:12] 2025-10-11 02:02:54,168 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 22:04:12] 2025-10-11 02:02:54,170 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 22:04:12] 2025-10-11 02:02:54,179 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 22:04:12] 2025-10-11 02:02:54,215 | INFO     | [data] copytool_in thread has finished
[2025-10-10 22:04:12] 2025-10-11 02:02:54,378 | INFO     | [job] control thread has finished
[2025-10-10 22:04:12] 2025-10-11 02:02:58,227 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 22:04:12] 2025-10-11 02:03:22,094 | INFO     | PID=635000 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 22:04:12] 2025-10-11 02:03:22,099 | INFO     | .. there are 9 such processes running
[2025-10-10 22:04:12] 2025-10-11 02:03:22,100 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 22:04:12] 2025-10-11 02:03:22,100 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 22:04:12] 2025-10-11 02:03:22,100 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 22:04:12] 2025-10-11 02:03:44,496 | INFO     | [monitor] cgroup control has ended
[2025-10-10 22:04:12] 2025-10-11 02:03:45,659 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140573683238720)>', '<ExcThread(monitor, started 140572442478336)>']
[2025-10-10 22:04:12] 2025-10-11 02:03:46,464 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 22:04:12] 2025-10-11 02:03:46,464 | INFO     | [monitor] control thread has ended
[2025-10-10 22:04:12] 2025-10-11 02:03:50,685 | INFO     | all workflow threads have been joined
[2025-10-10 22:04:12] 2025-10-11 02:03:50,685 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 22:04:12] 2025-10-11 02:03:50,686 | INFO     | traces error code: 0
[2025-10-10 22:04:12] 2025-10-11 02:03:50,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 22:04:12] 2025-10-11 02:03:52,206 [wrapper] ==== pilot stdout END ====
[2025-10-10 22:04:12] 2025-10-11 02:03:52,252 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 22:04:12] 2025-10-11 02:03:52,256 [wrapper] pilotpid: 635000
[2025-10-10 22:04:12] 2025-10-11 02:03:52,277 [wrapper] Pilot exit status: 0
[2025-10-10 22:04:12] 2025-10-11 02:03:52,344 [wrapper] pandaids: 6838911992
[2025-10-10 22:04:12] 2025-10-11 02:03:52,469 [wrapper] cleanup supervisor_pilot 1323427 635001
[2025-10-10 22:04:12] 2025-10-11 02:03:52,473 [wrapper] Test setup, not cleaning
[2025-10-10 22:04:12] 2025-10-11 02:03:52,477 [wrapper] apfmon messages muted
[2025-10-10 22:04:12] 2025-10-11 02:03:52,480 [wrapper] ==== wrapper stdout END ====
[2025-10-10 22:04:12] 2025-10-11 02:03:52,492 [wrapper] ==== wrapper stderr END ====
[2025-10-10 22:04:13]  *** Error codes and diagnostics ***
[2025-10-10 22:04:13]     "exeErrorCode": 0,
[2025-10-10 22:04:13]     "exeErrorDiag": "",
[2025-10-10 22:04:13]     "pilotErrorCode": 0,
[2025-10-10 22:04:13]     "pilotErrorDiag": "",
[2025-10-10 22:04:13]  *** Listing of results directory ***
[2025-10-10 22:04:13] total 395940
[2025-10-10 22:04:13] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 08:18 queuedata.json
[2025-10-10 22:04:13] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 08:19 pilot3.tar.gz
[2025-10-10 22:04:13] -rwx------. 1 boincer umatlas     36292 Oct 10 08:20 runpilot2-wrapper.sh
[2025-10-10 22:04:13] -rw-r--r--. 1 boincer umatlas       100 Oct 10 14:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 22:04:13] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 14:45 run_atlas
[2025-10-10 22:04:13] -rw-r--r--. 1 boincer umatlas       105 Oct 10 14:45 job.xml
[2025-10-10 22:04:13] -rw-r--r--. 2 boincer umatlas 214489806 Oct 10 14:45 EVNT.46376901._003931.pool.root.1
[2025-10-10 22:04:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 14:45 start_atlas.sh
[2025-10-10 22:04:13] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 14:45 shared
[2025-10-10 22:04:13] -rw-r--r--. 2 boincer umatlas    569678 Oct 10 14:45 input.tar.gz
[2025-10-10 22:04:13] -rw-r--r--. 1 boincer umatlas         0 Oct 10 14:45 boinc_lockfile
[2025-10-10 22:04:13] -rw-r--r--. 1 boincer umatlas      2518 Oct 10 14:45 pandaJob.out
[2025-10-10 22:04:13] -rw-------. 1 boincer umatlas    975525 Oct 10 14:45 agis_schedconf.cvmfs.json
[2025-10-10 22:04:13] drwx------. 5 boincer umatlas      4096 Oct 10 14:45 pilot3
[2025-10-10 22:04:13] -rw-------. 1 boincer umatlas 179269579 Oct 10 22:00 HITS.46376905._136188.pool.root.1
[2025-10-10 22:04:13] -rw-r--r--. 1 boincer umatlas       531 Oct 10 22:00 boinc_task_state.xml
[2025-10-10 22:04:13] -rw-------. 1 boincer umatlas      1056 Oct 10 22:01 memory_monitor_summary.json
[2025-10-10 22:04:13] -rw-------. 1 boincer umatlas   1560580 Oct 10 22:01 agis_ddmendpoints.agis.ALL.json
[2025-10-10 22:04:13] -rw-------. 1 boincer umatlas    613472 Oct 10 22:01 log.46376905._136188.job.log.tgz.1
[2025-10-10 22:04:13] -rw-------. 1 boincer umatlas        95 Oct 10 22:02 pilot_heartbeat.json
[2025-10-10 22:04:13] -rw-------. 1 boincer umatlas      7850 Oct 10 22:02 heartbeat.json
[2025-10-10 22:04:13] -rw-r--r--. 1 boincer umatlas      6613 Oct 10 22:03 init_data.xml
[2025-10-10 22:04:13] -rw-------. 1 boincer umatlas      4822 Oct 10 22:03 pilotlog.txt
[2025-10-10 22:04:13] -rw-------. 1 boincer umatlas   3278243 Oct 10 22:03 log.46376905._136188.job.log.1
[2025-10-10 22:04:13] -rw-------. 1 boincer umatlas       357 Oct 10 22:03 output.list
[2025-10-10 22:04:13] -rw-r--r--. 1 boincer umatlas       620 Oct 10 22:03 runtime_log
[2025-10-10 22:04:13] -rw-------. 1 boincer umatlas   3911680 Oct 10 22:03 result.tar.gz
[2025-10-10 22:04:13] -rw-r--r--. 1 boincer umatlas      8699 Oct 10 22:03 runtime_log.err
[2025-10-10 22:04:13] -rw-------. 1 boincer umatlas       661 Oct 10 22:03 Mv0KDmzHRR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkJdNDmsKs2Ho.diag
[2025-10-10 22:04:13] -rw-r--r--. 1 boincer umatlas        28 Oct 10 22:03 wrapper_checkpoint.txt
[2025-10-10 22:04:13] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 22:04 boinc_mmap_file
[2025-10-10 22:04:13] -rw-r--r--. 1 boincer umatlas     21010 Oct 10 22:04 stderr.txt
[2025-10-10 22:04:13] HITS file was successfully produced:
[2025-10-10 22:04:13] -rw-------. 1 boincer umatlas 179269579 Oct 10 22:00 shared/HITS.pool.root.1
[2025-10-10 22:04:13]  *** Contents of shared directory: ***
[2025-10-10 22:04:13] total 388932
[2025-10-10 22:04:13] -rw-r--r--. 2 boincer umatlas 214489806 Oct 10 14:45 ATLAS.root_0
[2025-10-10 22:04:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 14:45 start_atlas.sh
[2025-10-10 22:04:13] -rw-r--r--. 2 boincer umatlas    569678 Oct 10 14:45 input.tar.gz
[2025-10-10 22:04:13] -rw-------. 1 boincer umatlas 179269579 Oct 10 22:00 HITS.pool.root.1
[2025-10-10 22:04:13] -rw-------. 1 boincer umatlas   3911680 Oct 10 22:03 result.tar.gz
22:04:15 (631275): run_atlas exited; CPU time 56266.154764
22:04:15 (631275): called boinc_finish(0)

</stderr_txt>
]]>

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