Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:13:40 (3281405): wrapper (7.7.26015): starting
15:13:40 (3281405): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 15:13:40] Arguments: --nthreads 8
[2025-10-10 15:13:40] Threads: 8
[2025-10-10 15:13:40] Checking for CVMFS
[2025-10-10 15:13:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 15:13:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 15:13:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 15:13:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 15:13:42] 2.13.2.0 3269412 33252 363644 151558 2 590 37654686 40960000 49847 16776704 0 415434450 99.838 176664424 37054 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 15:13:42] CVMFS is ok
[2025-10-10 15:13:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 15:13:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 15:13:42] Further information can be found at the LHC@home message board.
[2025-10-10 15:13:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 15:13:42] Checking for apptainer binary...
[2025-10-10 15:13:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 15:13:42] Running /usr/bin/apptainer --version
[2025-10-10 15:13:42] apptainer version 1.4.3-1.el9
[2025-10-10 15:13:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 15:13:42] c8-16-2.aglt2.org
[2025-10-10 15:13:42] apptainer works
[2025-10-10 15:13:42] Set ATHENA_PROC_NUMBER=8
[2025-10-10 15:13:42] Set ATHENA_CORE_NUMBER=8
[2025-10-10 15:13:42] Starting ATLAS job with PandaID=6837595260
[2025-10-10 15:13:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 16:30:33]  *** The last 200 lines of the pilot log: ***
[2025-10-10 16:30:33] 2025-10-10 20:29:04,544 | INFO     | time since job start (4487s) is within the limit (172800.0s)
[2025-10-10 16:30:33] 2025-10-10 20:29:05,550 | INFO     | monitor loop #288: job 0:6837595260 is in state 'finished'
[2025-10-10 16:30:33] 2025-10-10 20:29:05,550 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 16:30:33] 2025-10-10 20:29:06,551 | INFO     | time since job start (4489s) is within the limit (172800.0s)
[2025-10-10 16:30:33] 2025-10-10 20:29:08,064 | INFO     | monitor loop #289: job 0:6837595260 is in state 'finished'
[2025-10-10 16:30:33] 2025-10-10 20:29:08,064 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 16:30:33] 2025-10-10 20:29:08,565 | INFO     | time since job start (4491s) is within the limit (172800.0s)
[2025-10-10 16:30:33] 2025-10-10 20:29:10,572 | INFO     | time since job start (4493s) is within the limit (172800.0s)
[2025-10-10 16:30:33] 2025-10-10 20:29:10,577 | INFO     | monitor loop #290: job 0:6837595260 is in state 'finished'
[2025-10-10 16:30:33] 2025-10-10 20:29:10,577 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 16:30:33] 2025-10-10 20:29:12,579 | INFO     | time since job start (4495s) is within the limit (172800.0s)
[2025-10-10 16:30:33] 2025-10-10 20:29:13,083 | INFO     | monitor loop #291: job 0:6837595260 is in state 'finished'
[2025-10-10 16:30:33] 2025-10-10 20:29:13,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 16:30:33] 2025-10-10 20:29:14,585 | INFO     | time since job start (4497s) is within the limit (172800.0s)
[2025-10-10 16:30:33] 2025-10-10 20:29:14,924 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-10 16:30:33] 2025-10-10 20:29:15,594 | INFO     | monitor loop #292: job 0:6837595260 is in state 'finished'
[2025-10-10 16:30:33] 2025-10-10 20:29:15,594 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 16:30:33] 2025-10-10 20:29:16,602 | INFO     | time since job start (4499s) is within the limit (172800.0s)
[2025-10-10 16:30:33] 2025-10-10 20:29:18,106 | INFO     | monitor loop #293: job 0:6837595260 is in state 'finished'
[2025-10-10 16:30:33] 2025-10-10 20:29:18,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 16:30:33] 2025-10-10 20:29:18,609 | INFO     | time since job start (4501s) is within the limit (172800.0s)
[2025-10-10 16:30:33] 2025-10-10 20:29:20,614 | INFO     | monitor loop #294: job 0:6837595260 is in state 'finished'
[2025-10-10 16:30:33] 2025-10-10 20:29:20,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 16:30:33] 2025-10-10 20:29:20,618 | INFO     | time since job start (4503s) is within the limit (172800.0s)
[2025-10-10 16:30:33] 2025-10-10 20:29:23,091 | INFO     | PID=3291721 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 16:30:33] 2025-10-10 20:29:23,091 | INFO     | .. there are 75 such processes running
[2025-10-10 16:30:33] 2025-10-10 20:29:23,122 | INFO     | monitor loop #295: job 0:6837595260 is in state 'finished'
[2025-10-10 16:30:33] 2025-10-10 20:29:23,122 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 16:30:33] 2025-10-10 20:29:24,095 | INFO     | time since job start (4507s) is within the limit (172800.0s)
[2025-10-10 16:30:33] 2025-10-10 20:29:25,639 | INFO     | monitor loop #296: job 0:6837595260 is in state 'finished'
[2025-10-10 16:30:33] 2025-10-10 20:29:25,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 16:30:33] 2025-10-10 20:29:26,103 | INFO     | time since job start (4509s) is within the limit (172800.0s)
[2025-10-10 16:30:33] 2025-10-10 20:29:28,111 | INFO     | time since job start (4511s) is within the limit (172800.0s)
[2025-10-10 16:30:33] 2025-10-10 20:29:28,144 | INFO     | monitor loop #297: job 0:6837595260 is in state 'finished'
[2025-10-10 16:30:33] 2025-10-10 20:29:28,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 16:30:33] 2025-10-10 20:29:29,494 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 16:30:33] 2025-10-10 20:29:29,499 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.989781249994
[2025-10-10 16:30:33] 2025-10-10 20:29:29,514 | INFO     | using path: /tmp/boinchome/slots/11/PanDA_Pilot-6837595260/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 16:30:33] 2025-10-10 20:29:29,515 | INFO     | extracted standard info from prmon json
[2025-10-10 16:30:33] 2025-10-10 20:29:29,515 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 16:30:33] 2025-10-10 20:29:29,515 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 16:30:33] 2025-10-10 20:29:29,515 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 16:30:33] 2025-10-10 20:29:29,515 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 16:30:33] 2025-10-10 20:29:29,516 | INFO     | fitting pss+swap vs Time
[2025-10-10 16:30:33] 2025-10-10 20:29:29,517 | INFO     | sum of square deviations: 85134774.8615385
[2025-10-10 16:30:33] 2025-10-10 20:29:29,517 | INFO     | sum of deviations: -868299298.9692308
[2025-10-10 16:30:33] 2025-10-10 20:29:29,517 | INFO     | mean x: 1760126003.0461538
[2025-10-10 16:30:33] 2025-10-10 20:29:29,517 | INFO     | mean y: 2216896.323076923
[2025-10-10 16:30:33] 2025-10-10 20:29:29,517 | INFO     | -- intersect: 17953943168.32077
[2025-10-10 16:30:33] 2025-10-10 20:29:29,517 | INFO     | intersect: 17953943168.32077
[2025-10-10 16:30:33] 2025-10-10 20:29:29,517 | INFO     | chi2: 0.057283730248025896
[2025-10-10 16:30:33] 2025-10-10 20:29:29,517 | INFO     | -- intersect: 17953943168.32077
[2025-10-10 16:30:33] 2025-10-10 20:29:29,517 | INFO     | current memory leak: -10.20 B/s (using 65 data points, chi2=0.06)
[2025-10-10 16:30:33] 2025-10-10 20:29:29,517 | INFO     | could have reported an average CPU frequency of 3797 MHz (6 samples)
[2025-10-10 16:30:33] 2025-10-10 20:29:29,517 | INFO     | ..............................
[2025-10-10 16:30:33] 2025-10-10 20:29:29,518 | INFO     | . Timing measurements:
[2025-10-10 16:30:33] 2025-10-10 20:29:29,518 | INFO     | . get job = 0 s
[2025-10-10 16:30:33] 2025-10-10 20:29:29,518 | INFO     | . initial setup = 2 s
[2025-10-10 16:30:33] 2025-10-10 20:29:29,518 | INFO     | . payload setup = 21 s
[2025-10-10 16:30:33] 2025-10-10 20:29:29,518 | INFO     | . stage-in = 0 s
[2025-10-10 16:30:33] 2025-10-10 20:29:29,518 | INFO     | . payload execution = 4414 s
[2025-10-10 16:30:33] 2025-10-10 20:29:29,518 | INFO     | . stage-out = 1 s
[2025-10-10 16:30:33] 2025-10-10 20:29:29,518 | INFO     | . log creation = 0 s
[2025-10-10 16:30:33] 2025-10-10 20:29:29,518 | INFO     | ..............................
[2025-10-10 16:30:33] 2025-10-10 20:29:29,598 | INFO     | 
[2025-10-10 16:30:33] 2025-10-10 20:29:29,598 | INFO     | job summary report
[2025-10-10 16:30:33] 2025-10-10 20:29:29,598 | INFO     | --------------------------------------------------
[2025-10-10 16:30:33] 2025-10-10 20:29:29,598 | INFO     | PanDA job id: 6837595260
[2025-10-10 16:30:33] 2025-10-10 20:29:29,598 | INFO     | task id: 46676269
[2025-10-10 16:30:33] 2025-10-10 20:29:29,598 | INFO     | errors: (none)
[2025-10-10 16:30:33] 2025-10-10 20:29:29,598 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 16:30:33] 2025-10-10 20:29:29,598 | INFO     | pilot state: finished 
[2025-10-10 16:30:33] 2025-10-10 20:29:29,598 | INFO     | transexitcode: 0
[2025-10-10 16:30:33] 2025-10-10 20:29:29,598 | INFO     | exeerrorcode: 0
[2025-10-10 16:30:33] 2025-10-10 20:29:29,598 | INFO     | exeerrordiag: 
[2025-10-10 16:30:33] 2025-10-10 20:29:29,598 | INFO     | exitcode: 0
[2025-10-10 16:30:33] 2025-10-10 20:29:29,598 | INFO     | exitmsg: OK
[2025-10-10 16:30:33] 2025-10-10 20:29:29,598 | INFO     | cpuconsumptiontime: 22267 s
[2025-10-10 16:30:33] 2025-10-10 20:29:29,598 | INFO     | nevents: 400
[2025-10-10 16:30:33] 2025-10-10 20:29:29,598 | INFO     | neventsw: 0
[2025-10-10 16:30:33] 2025-10-10 20:29:29,598 | INFO     | pid: 3309960
[2025-10-10 16:30:33] 2025-10-10 20:29:29,598 | INFO     | pgrp: 3309960
[2025-10-10 16:30:33] 2025-10-10 20:29:29,598 | INFO     | corecount: 8
[2025-10-10 16:30:33] 2025-10-10 20:29:29,599 | INFO     | event service: False
[2025-10-10 16:30:33] 2025-10-10 20:29:29,599 | INFO     | sizes: {0: 2348858, 1: 2348858, 11: 2348886, 14: 2349176, 22: 2349204, 4439: 2375312, 4440: 2375439, 4442: 2384495, 4446: 2384551, 4476: 2384745}
[2025-10-10 16:30:33] 2025-10-10 20:29:29,599 | INFO     | --------------------------------------------------
[2025-10-10 16:30:33] 2025-10-10 20:29:29,599 | INFO     | 
[2025-10-10 16:30:33] 2025-10-10 20:29:29,599 | INFO     | executing command: ls -lF /tmp/boinchome/slots/11
[2025-10-10 16:30:33] 2025-10-10 20:29:29,636 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 16:30:33] 2025-10-10 20:29:29,636 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 16:30:33] 2025-10-10 20:29:29,636 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 16:30:33] 2025-10-10 20:29:29,636 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 16:30:33] 2025-10-10 20:29:29,636 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 16:30:33] 2025-10-10 20:29:29,636 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 16:30:33] 2025-10-10 20:29:29,636 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 16:30:33] 2025-10-10 20:29:29,636 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 16:30:33] 2025-10-10 20:29:29,636 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 16:30:33] 2025-10-10 20:29:29,636 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 16:30:33] 2025-10-10 20:29:29,636 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 16:30:33] 2025-10-10 20:29:29,636 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 16:30:33] 2025-10-10 20:29:29,637 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 16:30:33] 2025-10-10 20:29:29,637 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 16:30:33] 2025-10-10 20:29:29,637 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 16:30:33] 2025-10-10 20:29:29,637 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 16:30:33] 2025-10-10 20:29:29,637 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 16:30:33] 2025-10-10 20:29:29,637 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 16:30:33] 2025-10-10 20:29:29,637 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 16:30:33] 2025-10-10 20:29:29,637 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 16:30:33] 2025-10-10 20:29:29,637 | INFO     | job 6837595260 has completed (purged errors)
[2025-10-10 16:30:33] 2025-10-10 20:29:29,637 | INFO     | overall cleanup function is called
[2025-10-10 16:30:33] 2025-10-10 20:29:30,656 | INFO     | --- collectZombieJob: --- 10, [3309960]
[2025-10-10 16:30:33] 2025-10-10 20:29:30,656 | INFO     | zombie collector waiting for pid 3309960
[2025-10-10 16:30:33] 2025-10-10 20:29:30,656 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 16:30:33] 2025-10-10 20:29:30,656 | INFO     | collected zombie processes
[2025-10-10 16:30:33] 2025-10-10 20:29:30,656 | INFO     | will attempt to kill all subprocesses of pid=3309960
[2025-10-10 16:30:33] 2025-10-10 20:29:32,427 | INFO     | process IDs to be killed: [3309960] (in reverse order)
[2025-10-10 16:30:33] 2025-10-10 20:29:32,710 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 16:30:33] 2025-10-10 20:29:32,710 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 16:30:33] 2025-10-10 20:29:32,786 | INFO     | did not find any defunct processes belonging to 3309960
[2025-10-10 16:30:33] 2025-10-10 20:29:32,838 | INFO     | did not find any defunct processes belonging to 3309960
[2025-10-10 16:30:33] 2025-10-10 20:29:32,839 | INFO     | ready for new job
[2025-10-10 16:30:33] 2025-10-10 20:29:32,839 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 16:30:33] 2025-10-10 20:29:32,840 | INFO     | ***************************************
[2025-10-10 16:30:33] 2025-10-10 20:29:32,840 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 16:30:33] 2025-10-10 20:29:32,840 | INFO     | ***************************************
[2025-10-10 16:30:33] 2025-10-10 20:29:32,840 | INFO     | 
[2025-10-10 16:30:33] 2025-10-10 20:29:32,860 | INFO     | architecture information:
[2025-10-10 16:30:33] 2025-10-10 20:29:32,866 | INFO     | executing command: cat /etc/os-release
[2025-10-10 16:30:33] 2025-10-10 20:29:32,926 | INFO     | cat /etc/os-release:
[2025-10-10 16:30:33] NAME="CentOS Linux"
[2025-10-10 16:30:33] VERSION="7 (Core)"
[2025-10-10 16:30:33] ID="centos"
[2025-10-10 16:30:33] ID_LIKE="rhel fedora"
[2025-10-10 16:30:33] VERSION_ID="7"
[2025-10-10 16:30:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 16:30:33] ANSI_COLOR="0;31"
[2025-10-10 16:30:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 16:30:33] HOME_URL="https://www.centos.org/"
[2025-10-10 16:30:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 16:30:33] 
[2025-10-10 16:30:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 16:30:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 16:30:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 16:30:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 16:30:33] 
[2025-10-10 16:30:33] 2025-10-10 20:29:32,926 | INFO     | ***************************************
[2025-10-10 16:30:33] 2025-10-10 20:29:33,428 | INFO     | executing command: df -mP /tmp/boinchome/slots/11
[2025-10-10 16:30:33] 2025-10-10 20:29:33,464 | INFO     | sufficient remaining disk space (168501968896 B)
[2025-10-10 16:30:33] 2025-10-10 20:29:33,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 16:30:33] 2025-10-10 20:29:33,464 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 16:30:33] 2025-10-10 20:29:33,464 | INFO     | update_server=False
[2025-10-10 16:30:33] 2025-10-10 20:29:33,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 16:30:33] 2025-10-10 20:29:33,465 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 16:30:33] 2025-10-10 20:29:33,566 | INFO     | all job control threads have been joined
[2025-10-10 16:30:33] 2025-10-10 20:29:33,854 | INFO     | all data control threads have been joined
[2025-10-10 16:30:33] 2025-10-10 20:29:33,954 | INFO     | all payload control threads have been joined
[2025-10-10 16:30:33] 2025-10-10 20:29:34,165 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 16:30:33] 2025-10-10 20:29:34,165 | INFO     | aborting loop
[2025-10-10 16:30:33] 2025-10-10 20:29:34,477 | INFO     | [job] retrieve thread has finished
[2025-10-10 16:30:33] 2025-10-10 20:29:34,572 | INFO     | [job] control thread has finished
[2025-10-10 16:30:33] 2025-10-10 20:29:34,584 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 16:30:33] 2025-10-10 20:29:34,618 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 16:30:33] 2025-10-10 20:29:34,720 | INFO     | [payload] validate_post thread has finished
[2025-10-10 16:30:33] 2025-10-10 20:29:34,859 | INFO     | [data] control thread has finished
[2025-10-10 16:30:33] 2025-10-10 20:29:34,960 | INFO     | [payload] control thread has finished
[2025-10-10 16:30:33] 2025-10-10 20:29:35,123 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 16:30:33] 2025-10-10 20:29:35,170 | INFO     | [job] job monitor thread has finished
[2025-10-10 16:30:33] 2025-10-10 20:29:35,203 | INFO     | [job] validate thread has finished
[2025-10-10 16:30:33] 2025-10-10 20:29:35,622 | INFO     | [payload] failed_post thread has finished
[2025-10-10 16:30:33] 2025-10-10 20:29:35,624 | INFO     | [job] queue monitor thread has finished
[2025-10-10 16:30:33] 2025-10-10 20:29:35,645 | INFO     | [data] copytool_in thread has finished
[2025-10-10 16:30:33] 2025-10-10 20:29:35,840 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 16:30:33] 2025-10-10 20:29:35,888 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 16:30:33] 2025-10-10 20:29:36,592 | INFO     | [data] copytool_out thread has finished
[2025-10-10 16:30:33] 2025-10-10 20:29:37,476 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 16:30:33] 2025-10-10 20:29:43,898 | INFO     | job.realtimelogging is not enabled
[2025-10-10 16:30:33] 2025-10-10 20:29:44,904 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 16:30:33] 2025-10-10 20:30:02,326 | INFO     | PID=3291721 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 16:30:33] 2025-10-10 20:30:02,333 | INFO     | .. there are 75 such processes running
[2025-10-10 16:30:33] 2025-10-10 20:30:02,334 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 16:30:33] 2025-10-10 20:30:02,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 16:30:33] 2025-10-10 20:30:02,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 16:30:33] 2025-10-10 20:30:25,127 | INFO     | [monitor] cgroup control has ended
[2025-10-10 16:30:33] 2025-10-10 20:30:26,850 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140514449028928)>', '<ExcThread(monitor, started 140514175194880)>']
[2025-10-10 16:30:33] 2025-10-10 20:30:27,498 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 16:30:33] 2025-10-10 20:30:27,499 | INFO     | [monitor] control thread has ended
[2025-10-10 16:30:33] 2025-10-10 20:30:31,876 | INFO     | all workflow threads have been joined
[2025-10-10 16:30:33] 2025-10-10 20:30:31,876 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 16:30:33] 2025-10-10 20:30:31,876 | INFO     | traces error code: 0
[2025-10-10 16:30:33] 2025-10-10 20:30:31,876 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 16:30:33] 2025-10-10 20:30:32,336 [wrapper] ==== pilot stdout END ====
[2025-10-10 16:30:33] 2025-10-10 20:30:32,352 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 16:30:33] 2025-10-10 20:30:32,374 [wrapper] pilotpid: 3291721
[2025-10-10 16:30:33] 2025-10-10 20:30:32,395 [wrapper] Pilot exit status: 0
[2025-10-10 16:30:33] 2025-10-10 20:30:32,476 [wrapper] pandaids: 6837595260
[2025-10-10 16:30:33] 2025-10-10 20:30:33,372 [wrapper] cleanup supervisor_pilot 4155954 3291722
[2025-10-10 16:30:33] 2025-10-10 20:30:33,384 [wrapper] Test setup, not cleaning
[2025-10-10 16:30:33] 2025-10-10 20:30:33,407 [wrapper] apfmon messages muted
[2025-10-10 16:30:33] 2025-10-10 20:30:33,425 [wrapper] ==== wrapper stdout END ====
[2025-10-10 16:30:33] 2025-10-10 20:30:33,440 [wrapper] ==== wrapper stderr END ====
[2025-10-10 16:30:33]  *** Error codes and diagnostics ***
[2025-10-10 16:30:33]     "exeErrorCode": 0,
[2025-10-10 16:30:33]     "exeErrorDiag": "",
[2025-10-10 16:30:33]     "pilotErrorCode": 0,
[2025-10-10 16:30:33]     "pilotErrorDiag": "",
[2025-10-10 16:30:33]  *** Listing of results directory ***
[2025-10-10 16:30:33] total 413380
[2025-10-10 16:30:33] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 06:29 pilot3.tar.gz
[2025-10-10 16:30:33] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 06:45 queuedata.json
[2025-10-10 16:30:33] -rwx------. 1 boincer umatlas     36292 Oct 10 06:47 runpilot2-wrapper.sh
[2025-10-10 16:30:33] -rw-r--r--. 1 boincer umatlas       100 Oct 10 15:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 16:30:33] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 15:13 run_atlas
[2025-10-10 16:30:33] -rw-r--r--. 1 boincer umatlas       105 Oct 10 15:13 job.xml
[2025-10-10 16:30:33] -rw-r--r--. 2 boincer umatlas 220974412 Oct 10 15:13 EVNT.46676267._001510.pool.root.1
[2025-10-10 16:30:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 15:13 start_atlas.sh
[2025-10-10 16:30:33] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 15:13 shared
[2025-10-10 16:30:33] -rw-r--r--. 2 boincer umatlas    569681 Oct 10 15:13 input.tar.gz
[2025-10-10 16:30:33] -rw-r--r--. 1 boincer umatlas         0 Oct 10 15:13 boinc_lockfile
[2025-10-10 16:30:33] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 15:13 pandaJob.out
[2025-10-10 16:30:33] -rw-------. 1 boincer umatlas    975525 Oct 10 15:14 agis_schedconf.cvmfs.json
[2025-10-10 16:30:33] -rw-------. 1 boincer umatlas   1560580 Oct 10 15:14 agis_ddmendpoints.agis.ALL.json
[2025-10-10 16:30:33] drwx------. 5 boincer umatlas      4096 Oct 10 15:14 pilot3
[2025-10-10 16:30:33] -rw-r--r--. 1 boincer umatlas      7162 Oct 10 16:27 init_data.xml
[2025-10-10 16:30:33] -rw-------. 1 boincer umatlas 196541708 Oct 10 16:28 HITS.46676269._037182.pool.root.1
[2025-10-10 16:30:33] -rw-r--r--. 1 boincer umatlas       530 Oct 10 16:28 boinc_task_state.xml
[2025-10-10 16:30:33] -rw-------. 1 boincer umatlas      1034 Oct 10 16:28 memory_monitor_summary.json
[2025-10-10 16:30:33] -rw-------. 1 boincer umatlas    331730 Oct 10 16:28 log.46676269._037182.job.log.tgz.1
[2025-10-10 16:30:33] -rw-------. 1 boincer umatlas      7782 Oct 10 16:29 heartbeat.json
[2025-10-10 16:30:33] -rw-------. 1 boincer umatlas        95 Oct 10 16:30 pilot_heartbeat.json
[2025-10-10 16:30:33] -rw-------. 1 boincer umatlas      4898 Oct 10 16:30 pilotlog.txt
[2025-10-10 16:30:33] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 16:30 boinc_mmap_file
[2025-10-10 16:30:33] -rw-r--r--. 1 boincer umatlas        27 Oct 10 16:30 wrapper_checkpoint.txt
[2025-10-10 16:30:33] -rw-------. 1 boincer umatlas    609040 Oct 10 16:30 log.46676269._037182.job.log.1
[2025-10-10 16:30:33] -rw-------. 1 boincer umatlas       357 Oct 10 16:30 output.list
[2025-10-10 16:30:33] -rw-r--r--. 1 boincer umatlas       620 Oct 10 16:30 runtime_log
[2025-10-10 16:30:33] -rw-------. 1 boincer umatlas    962560 Oct 10 16:30 result.tar.gz
[2025-10-10 16:30:33] -rw-r--r--. 1 boincer umatlas      8712 Oct 10 16:30 runtime_log.err
[2025-10-10 16:30:33] -rw-------. 1 boincer umatlas       651 Oct 10 16:30 POwLDmbpPR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmvnPMDmQftsWo.diag
[2025-10-10 16:30:33] -rw-r--r--. 1 boincer umatlas     22060 Oct 10 16:30 stderr.txt
[2025-10-10 16:30:33] HITS file was successfully produced:
[2025-10-10 16:30:33] -rw-------. 1 boincer umatlas 196541708 Oct 10 16:28 shared/HITS.pool.root.1
[2025-10-10 16:30:33]  *** Contents of shared directory: ***
[2025-10-10 16:30:33] total 409256
[2025-10-10 16:30:33] -rw-r--r--. 2 boincer umatlas 220974412 Oct 10 15:13 ATLAS.root_0
[2025-10-10 16:30:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 15:13 start_atlas.sh
[2025-10-10 16:30:33] -rw-r--r--. 2 boincer umatlas    569681 Oct 10 15:13 input.tar.gz
[2025-10-10 16:30:33] -rw-------. 1 boincer umatlas 196541708 Oct 10 16:28 HITS.pool.root.1
[2025-10-10 16:30:33] -rw-------. 1 boincer umatlas    962560 Oct 10 16:30 result.tar.gz
16:30:35 (3281405): run_atlas exited; CPU time 22438.300831
16:30:35 (3281405): called boinc_finish(0)

</stderr_txt>
]]>

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