Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:59:03 (2889048): wrapper (7.7.26015): starting
07:59:03 (2889048): wrapper: running run_atlas (--nthreads 3)
[2025-10-11 07:59:03] Arguments: --nthreads 3
[2025-10-11 07:59:03] Threads: 3
[2025-10-11 07:59:03] Checking for CVMFS
[2025-10-11 07:59:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 07:59:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 07:59:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 07:59:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 07:59:03] 2.9.2.0 2117043 2576 81612 151573 1 57 33333062 36864000 0 130560 0 2035523 99.991 86769 975 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-11 07:59:03] CVMFS is ok
[2025-10-11 07:59:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:59:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 07:59:03] Further information can be found at the LHC@home message board.
[2025-10-11 07:59:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:59:03] Checking for apptainer binary...
[2025-10-11 07:59:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 07:59:03] Running /usr/bin/apptainer --version
[2025-10-11 07:59:03] apptainer version 1.4.1-1.1
[2025-10-11 07:59:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:59:03] cosA127b
[2025-10-11 07:59:03] apptainer works
[2025-10-11 07:59:03] Set ATHENA_PROC_NUMBER=3
[2025-10-11 07:59:03] Set ATHENA_CORE_NUMBER=3
[2025-10-11 07:59:03] Starting ATLAS job with PandaID=6837506899
[2025-10-11 07:59:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 09:21:20]  *** The last 200 lines of the pilot log: ***
[2025-10-11 09:21:20]  status_code=0
[2025-10-11 09:21:20]  storage_token=
[2025-10-11 09:21:20]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6837506899/log.46676269._034018.job.log.tgz.1
[2025-10-11 09:21:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/7a/log.46676269._034018.job.log.tgz.1
[2025-10-11 09:21:20]  workdir=None
[2025-10-11 09:21:20] ]
[2025-10-11 09:21:20] 2025-10-11 07:20:30,503 | INFO     | transferring file log.46676269._034018.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6837506899/log.46676269._034018.job.log.tgz.1 to /local/data/boinc/
[2025-10-11 09:21:20] 2025-10-11 07:20:30,503 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6837506899/log.46676269._034018.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0340
[2025-10-11 09:21:20] 2025-10-11 07:20:30,515 | INFO     | adding to output.list: log.46676269._034018.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/7a/log.46676269._034018.job.log.tg
[2025-10-11 09:21:20] 2025-10-11 07:20:30,515 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 09:21:20] 2025-10-11 07:20:30,515 | INFO     | summary of transferred files:
[2025-10-11 09:21:20] 2025-10-11 07:20:30,515 | INFO     |  -- lfn=log.46676269._034018.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 09:21:20] 2025-10-11 07:20:30,515 | INFO     | stage-out finished correctly
[2025-10-11 09:21:20] 2025-10-11 07:20:31,512 | INFO     | time since job start (4882s) is within the limit (172800.0s)
[2025-10-11 09:21:20] 2025-10-11 07:20:32,138 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 09:21:20] 2025-10-11 07:20:32,924 | INFO     | monitor loop #376: job 0:6837506899 is in state 'finished'
[2025-10-11 09:21:20] 2025-10-11 07:20:32,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 09:21:20] 2025-10-11 07:20:33,519 | INFO     | time since job start (4884s) is within the limit (172800.0s)
[2025-10-11 09:21:20] 2025-10-11 07:20:33,531 | INFO     | job 6837506899 has state=finished
[2025-10-11 09:21:20] 2025-10-11 07:20:33,531 | INFO     | preparing for final server update for job 6837506899 in state='finished'
[2025-10-11 09:21:20] 2025-10-11 07:20:33,532 | INFO     | this job has now completed (state=finished)
[2025-10-11 09:21:20] 2025-10-11 07:20:33,532 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 09:21:20] 2025-10-11 07:20:33,532 | INFO     | log transfer has been attempted: DONE
[2025-10-11 09:21:20] 2025-10-11 07:20:33,532 | INFO     | job 6837506899 has finished - writing final server update
[2025-10-11 09:21:20] 2025-10-11 07:20:33,532 | INFO     | total number of processed events: 400 (read)
[2025-10-11 09:21:20] 2025-10-11 07:20:33,533 | INFO     | executing command: lscpu
[2025-10-11 09:21:20] 2025-10-11 07:20:33,549 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 09:21:20] 2025-10-11 07:20:34,574 | INFO     | PID=2892759 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 09:21:20] 2025-10-11 07:20:35,427 | INFO     | monitor loop #377: job 0:6837506899 is in state 'finished'
[2025-10-11 09:21:20] 2025-10-11 07:20:35,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 09:21:20] 2025-10-11 07:20:35,574 | INFO     | time since job start (4886s) is within the limit (172800.0s)
[2025-10-11 09:21:20] 2025-10-11 07:20:37,580 | INFO     | time since job start (4888s) is within the limit (172800.0s)
[2025-10-11 09:21:20] 2025-10-11 07:20:37,930 | INFO     | monitor loop #378: job 0:6837506899 is in state 'finished'
[2025-10-11 09:21:20] 2025-10-11 07:20:37,930 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 09:21:20] 2025-10-11 07:20:38,408 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 09:21:20] 2025-10-11 07:20:38,410 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3505.3155833333335
[2025-10-11 09:21:20] 2025-10-11 07:20:38,410 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6837506899/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 09:21:20] 2025-10-11 07:20:38,411 | INFO     | extracted standard info from prmon json
[2025-10-11 09:21:20] 2025-10-11 07:20:38,411 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 09:21:20] 2025-10-11 07:20:38,411 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 09:21:20] 2025-10-11 07:20:38,411 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 09:21:20] 2025-10-11 07:20:38,411 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 09:21:20] 2025-10-11 07:20:38,411 | INFO     | fitting pss+swap vs Time
[2025-10-11 09:21:20] 2025-10-11 07:20:38,412 | INFO     | sum of square deviations: 120605052.0
[2025-10-11 09:21:20] 2025-10-11 07:20:38,412 | INFO     | sum of deviations: 1210032478.0
[2025-10-11 09:21:20] 2025-10-11 07:20:38,412 | INFO     | mean x: 1760164869.0
[2025-10-11 09:21:20] 2025-10-11 07:20:38,412 | INFO     | mean y: 2363577.0
[2025-10-11 09:21:20] 2025-10-11 07:20:38,412 | INFO     | -- intersect: -17657399615.379498
[2025-10-11 09:21:20] 2025-10-11 07:20:38,412 | INFO     | intersect: -17657399615.379498
[2025-10-11 09:21:20] 2025-10-11 07:20:38,412 | INFO     | chi2: 0.027114788692935494
[2025-10-11 09:21:20] 2025-10-11 07:20:38,412 | INFO     | -- intersect: -17657399615.379498
[2025-10-11 09:21:20] 2025-10-11 07:20:38,412 | INFO     | current memory leak: 10.03 B/s (using 73 data points, chi2=0.03)
[2025-10-11 09:21:20] 2025-10-11 07:20:38,412 | INFO     | could have reported an average CPU frequency of 3818 MHz (6 samples)
[2025-10-11 09:21:20] 2025-10-11 07:20:38,412 | INFO     | ..............................
[2025-10-11 09:21:20] 2025-10-11 07:20:38,412 | INFO     | . Timing measurements:
[2025-10-11 09:21:20] 2025-10-11 07:20:38,412 | INFO     | . get job = 0 s
[2025-10-11 09:21:20] 2025-10-11 07:20:38,412 | INFO     | . initial setup = 1 s
[2025-10-11 09:21:20] 2025-10-11 07:20:38,412 | INFO     | . payload setup = 2 s
[2025-10-11 09:21:20] 2025-10-11 07:20:38,412 | INFO     | . stage-in = 0 s
[2025-10-11 09:21:20] 2025-10-11 07:20:38,412 | INFO     | . payload execution = 4860 s
[2025-10-11 09:21:20] 2025-10-11 07:20:38,412 | INFO     | . stage-out = 0 s
[2025-10-11 09:21:20] 2025-10-11 07:20:38,413 | INFO     | . log creation = 0 s
[2025-10-11 09:21:20] 2025-10-11 07:20:38,413 | INFO     | ..............................
[2025-10-11 09:21:20] 2025-10-11 07:20:38,455 | INFO     | 
[2025-10-11 09:21:20] 2025-10-11 07:20:38,455 | INFO     | job summary report
[2025-10-11 09:21:20] 2025-10-11 07:20:38,455 | INFO     | --------------------------------------------------
[2025-10-11 09:21:20] 2025-10-11 07:20:38,455 | INFO     | PanDA job id: 6837506899
[2025-10-11 09:21:20] 2025-10-11 07:20:38,455 | INFO     | task id: 46676269
[2025-10-11 09:21:20] 2025-10-11 07:20:38,456 | INFO     | errors: (none)
[2025-10-11 09:21:20] 2025-10-11 07:20:38,456 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 09:21:20] 2025-10-11 07:20:38,456 | INFO     | pilot state: finished 
[2025-10-11 09:21:20] 2025-10-11 07:20:38,456 | INFO     | transexitcode: 0
[2025-10-11 09:21:20] 2025-10-11 07:20:38,456 | INFO     | exeerrorcode: 0
[2025-10-11 09:21:20] 2025-10-11 07:20:38,456 | INFO     | exeerrordiag: 
[2025-10-11 09:21:20] 2025-10-11 07:20:38,456 | INFO     | exitcode: 0
[2025-10-11 09:21:20] 2025-10-11 07:20:38,456 | INFO     | exitmsg: OK
[2025-10-11 09:21:20] 2025-10-11 07:20:38,456 | INFO     | cpuconsumptiontime: 13942 s
[2025-10-11 09:21:20] 2025-10-11 07:20:38,456 | INFO     | nevents: 400
[2025-10-11 09:21:20] 2025-10-11 07:20:38,456 | INFO     | neventsw: 0
[2025-10-11 09:21:20] 2025-10-11 07:20:38,456 | INFO     | pid: 2899206
[2025-10-11 09:21:20] 2025-10-11 07:20:38,456 | INFO     | pgrp: 2899206
[2025-10-11 09:21:20] 2025-10-11 07:20:38,456 | INFO     | corecount: 3
[2025-10-11 09:21:20] 2025-10-11 07:20:38,456 | INFO     | event service: False
[2025-10-11 09:21:20] 2025-10-11 07:20:38,456 | INFO     | sizes: {0: 2348746, 1: 2348860, 3: 2349150, 11: 2349178, 4867: 2375620, 4869: 2384624, 4870: 2384808, 4877: 2385002}
[2025-10-11 09:21:20] 2025-10-11 07:20:38,456 | INFO     | --------------------------------------------------
[2025-10-11 09:21:20] 2025-10-11 07:20:38,456 | INFO     | 
[2025-10-11 09:21:20] 2025-10-11 07:20:38,456 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | job 6837506899 has completed (purged errors)
[2025-10-11 09:21:20] 2025-10-11 07:20:38,469 | INFO     | overall cleanup function is called
[2025-10-11 09:21:20] 2025-10-11 07:20:39,476 | INFO     | --- collectZombieJob: --- 10, [2899206]
[2025-10-11 09:21:20] 2025-10-11 07:20:39,476 | INFO     | zombie collector waiting for pid 2899206
[2025-10-11 09:21:20] 2025-10-11 07:20:39,476 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 09:21:20] 2025-10-11 07:20:39,476 | INFO     | collected zombie processes
[2025-10-11 09:21:20] 2025-10-11 07:20:39,476 | INFO     | will attempt to kill all subprocesses of pid=2899206
[2025-10-11 09:21:20] 2025-10-11 07:20:39,517 | INFO     | process IDs to be killed: [2899206] (in reverse order)
[2025-10-11 09:21:20] 2025-10-11 07:20:39,540 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 09:21:20] 2025-10-11 07:20:39,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 09:21:20] 2025-10-11 07:20:39,541 | INFO     | did not find any defunct processes belonging to 2899206
[2025-10-11 09:21:20] 2025-10-11 07:20:39,542 | INFO     | did not find any defunct processes belonging to 2899206
[2025-10-11 09:21:20] 2025-10-11 07:20:39,542 | INFO     | ready for new job
[2025-10-11 09:21:20] 2025-10-11 07:20:39,542 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 09:21:20] 2025-10-11 07:20:39,543 | INFO     | ***************************************
[2025-10-11 09:21:20] 2025-10-11 07:20:39,543 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 09:21:20] 2025-10-11 07:20:39,543 | INFO     | ***************************************
[2025-10-11 09:21:20] 2025-10-11 07:20:39,543 | INFO     | 
[2025-10-11 09:21:20] 2025-10-11 07:20:39,544 | INFO     | architecture information:
[2025-10-11 09:21:20] 2025-10-11 07:20:39,544 | INFO     | executing command: cat /etc/os-release
[2025-10-11 09:21:20] 2025-10-11 07:20:39,552 | INFO     | cat /etc/os-release:
[2025-10-11 09:21:20] NAME="CentOS Linux"
[2025-10-11 09:21:20] VERSION="7 (Core)"
[2025-10-11 09:21:20] ID="centos"
[2025-10-11 09:21:20] ID_LIKE="rhel fedora"
[2025-10-11 09:21:20] VERSION_ID="7"
[2025-10-11 09:21:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 09:21:20] ANSI_COLOR="0;31"
[2025-10-11 09:21:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 09:21:20] HOME_URL="https://www.centos.org/"
[2025-10-11 09:21:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 09:21:20] 
[2025-10-11 09:21:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 09:21:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 09:21:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 09:21:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 09:21:20] 
[2025-10-11 09:21:20] 2025-10-11 07:20:39,552 | INFO     | ***************************************
[2025-10-11 09:21:20] 2025-10-11 07:20:40,055 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-11 09:21:20] 2025-10-11 07:20:40,068 | INFO     | sufficient remaining disk space (326172147712 B)
[2025-10-11 09:21:20] 2025-10-11 07:20:40,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 09:21:20] 2025-10-11 07:20:40,068 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 09:21:20] 2025-10-11 07:20:40,068 | INFO     | update_server=False
[2025-10-11 09:21:20] 2025-10-11 07:20:40,068 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 09:21:20] 2025-10-11 07:20:40,068 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:21:20] 2025-10-11 07:20:40,434 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 09:21:20] 2025-10-11 07:20:40,434 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 09:21:20] 2025-10-11 07:20:40,434 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:21:20] 2025-10-11 07:20:40,434 | INFO     | will abort loop
[2025-10-11 09:21:20] 2025-10-11 07:20:40,441 | INFO     | all payload control threads have been joined
[2025-10-11 09:21:20] 2025-10-11 07:20:40,809 | INFO     | all data control threads have been joined
[2025-10-11 09:21:20] 2025-10-11 07:20:41,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 09:21:20] 2025-10-11 07:20:41,074 | INFO     | [job] retrieve thread has finished
[2025-10-11 09:21:20] 2025-10-11 07:20:41,074 | INFO     | [job] queue monitor thread has finished
[2025-10-11 09:21:20] 2025-10-11 07:20:41,079 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 09:21:20] 2025-10-11 07:20:41,094 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 09:21:20] 2025-10-11 07:20:41,107 | INFO     | [payload] validate_post thread has finished
[2025-10-11 09:21:20] 2025-10-11 07:20:41,370 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 09:21:20] 2025-10-11 07:20:41,440 | INFO     | [job] job monitor thread has finished
[2025-10-11 09:21:20] 2025-10-11 07:20:41,446 | INFO     | [payload] control thread has finished
[2025-10-11 09:21:20] 2025-10-11 07:20:41,715 | INFO     | all job control threads have been joined
[2025-10-11 09:21:20] 2025-10-11 07:20:41,815 | INFO     | [data] control thread has finished
[2025-10-11 09:21:20] 2025-10-11 07:20:41,965 | INFO     | [data] copytool_in thread has finished
[2025-10-11 09:21:20] 2025-10-11 07:20:42,166 | INFO     | [payload] failed_post thread has finished
[2025-10-11 09:21:20] 2025-10-11 07:20:42,526 | INFO     | [job] validate thread has finished
[2025-10-11 09:21:20] 2025-10-11 07:20:42,679 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 09:21:20] 2025-10-11 07:20:42,719 | INFO     | [job] control thread has finished
[2025-10-11 09:21:20] 2025-10-11 07:20:43,067 | INFO     | [data] copytool_out thread has finished
[2025-10-11 09:21:20] 2025-10-11 07:20:46,686 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 09:21:20] 2025-10-11 07:20:50,481 | INFO     | job.realtimelogging is not enabled
[2025-10-11 09:21:20] 2025-10-11 07:20:51,486 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 09:21:20] 2025-10-11 07:21:10,692 | INFO     | PID=2892759 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 09:21:20] 2025-10-11 07:21:10,692 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 09:21:20] 2025-10-11 07:21:10,692 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 09:21:20] 2025-10-11 07:21:10,692 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 09:21:20] 2025-10-11 07:21:14,759 | INFO     | [monitor] cgroup control has ended
[2025-10-11 09:21:20] 2025-10-11 07:21:15,765 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140051585226560)>', '<ExcThread(monitor, started 140050494912256)>']
[2025-10-11 09:21:20] 2025-10-11 07:21:16,724 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 09:21:20] 2025-10-11 07:21:16,724 | INFO     | [monitor] control thread has ended
[2025-10-11 09:21:20] 2025-10-11 07:21:20,783 | INFO     | all workflow threads have been joined
[2025-10-11 09:21:20] 2025-10-11 07:21:20,784 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 09:21:20] 2025-10-11 07:21:20,784 | INFO     | traces error code: 0
[2025-10-11 09:21:20] 2025-10-11 07:21:20,784 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 09:21:20] 2025-10-11 07:21:20,832 [wrapper] ==== pilot stdout END ====
[2025-10-11 09:21:20] 2025-10-11 07:21:20,834 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 09:21:20] 2025-10-11 07:21:20,837 [wrapper] pilotpid: 2892759
[2025-10-11 09:21:20] 2025-10-11 07:21:20,839 [wrapper] Pilot exit status: 0
[2025-10-11 09:21:20] 2025-10-11 07:21:20,846 [wrapper] pandaids: 6837506899
[2025-10-11 09:21:20] 2025-10-11 07:21:20,862 [wrapper] cleanup supervisor_pilot 2911922 2892760
[2025-10-11 09:21:20] 2025-10-11 07:21:20,864 [wrapper] Test setup, not cleaning
[2025-10-11 09:21:20] 2025-10-11 07:21:20,867 [wrapper] apfmon messages muted
[2025-10-11 09:21:20] 2025-10-11 07:21:20,869 [wrapper] ==== wrapper stdout END ====
[2025-10-11 09:21:20] 2025-10-11 07:21:20,871 [wrapper] ==== wrapper stderr END ====
[2025-10-11 09:21:20]  *** Error codes and diagnostics ***
[2025-10-11 09:21:20]     "exeErrorCode": 0,
[2025-10-11 09:21:20]     "exeErrorDiag": "",
[2025-10-11 09:21:20]     "pilotErrorCode": 0,
[2025-10-11 09:21:20]     "pilotErrorDiag": "",
[2025-10-11 09:21:20]  *** Listing of results directory ***
[2025-10-11 09:21:20] total 409084
[2025-10-11 09:21:20] -rw-r--r-- 1 boinc boinc    557409 Oct 10 08:48 pilot3.tar.gz
[2025-10-11 09:21:20] -rwx------ 1 boinc boinc     36292 Oct 10 08:50 runpilot2-wrapper.sh
[2025-10-11 09:21:20] -rw-r--r-- 1 boinc boinc      5112 Oct 10 08:50 queuedata.json
[2025-10-11 09:21:20] -rw-r--r-- 1 boinc boinc       100 Oct 11 07:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 09:21:20] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 07:59 run_atlas
[2025-10-11 09:21:20] -rw-r--r-- 1 boinc boinc       105 Oct 11 07:59 job.xml
[2025-10-11 09:21:20] -rw-r--r-- 2 boinc boinc 223557678 Oct 11 07:59 EVNT.46676267._001384.pool.root.1
[2025-10-11 09:21:20] drwxrwx--x 2 boinc boinc      4096 Oct 11 07:59 shared
[2025-10-11 09:21:20] -rw-r--r-- 2 boinc boinc    569679 Oct 11 07:59 input.tar.gz
[2025-10-11 09:21:20] -rw-r--r-- 2 boinc boinc     15120 Oct 11 07:59 start_atlas.sh
[2025-10-11 09:21:20] -rw-r--r-- 1 boinc boinc         0 Oct 11 07:59 boinc_setup_complete
[2025-10-11 09:21:20] -rw-r--r-- 1 boinc boinc      6441 Oct 11 07:59 init_data.xml
[2025-10-11 09:21:20] -rw-r--r-- 1 boinc boinc         0 Oct 11 07:59 boinc_lockfile
[2025-10-11 09:21:20] -rw-r--r-- 1 boinc boinc      2550 Oct 11 07:59 pandaJob.out
[2025-10-11 09:21:20] -rw------- 1 boinc boinc    975533 Oct 11 07:59 agis_schedconf.cvmfs.json
[2025-10-11 09:21:20] -rw------- 1 boinc boinc   1560580 Oct 11 07:59 agis_ddmendpoints.agis.ALL.json
[2025-10-11 09:21:20] drwx------ 5 boinc boinc      4096 Oct 11 07:59 pilot3
[2025-10-11 09:21:20] -rw------- 1 boinc boinc 189491547 Oct 11 09:20 HITS.46676269._034018.pool.root.1
[2025-10-11 09:21:20] -rw-r--r-- 1 boinc boinc       529 Oct 11 09:20 boinc_task_state.xml
[2025-10-11 09:21:20] -rw------- 1 boinc boinc      1019 Oct 11 09:20 memory_monitor_summary.json
[2025-10-11 09:21:20] -rw------- 1 boinc boinc    255372 Oct 11 09:20 log.46676269._034018.job.log.tgz.1
[2025-10-11 09:21:20] -rw------- 1 boinc boinc        95 Oct 11 09:20 pilot_heartbeat.json
[2025-10-11 09:21:20] -rw------- 1 boinc boinc      7777 Oct 11 09:20 heartbeat.json
[2025-10-11 09:21:20] -rw-r--r-- 1 boinc boinc        27 Oct 11 09:21 wrapper_checkpoint.txt
[2025-10-11 09:21:20] -rw-r--r-- 1 boinc boinc      8192 Oct 11 09:21 boinc_mmap_file
[2025-10-11 09:21:20] -rw------- 1 boinc boinc      5010 Oct 11 09:21 pilotlog.txt
[2025-10-11 09:21:20] -rw------- 1 boinc boinc    720147 Oct 11 09:21 log.46676269._034018.job.log.1
[2025-10-11 09:21:20] -rw------- 1 boinc boinc       357 Oct 11 09:21 output.list
[2025-10-11 09:21:20] -rw-r--r-- 1 boinc boinc       620 Oct 11 09:21 runtime_log
[2025-10-11 09:21:20] -rw------- 1 boinc boinc    993280 Oct 11 09:21 result.tar.gz
[2025-10-11 09:21:20] -rw-r--r-- 1 boinc boinc      8787 Oct 11 09:21 runtime_log.err
[2025-10-11 09:21:20] -rw------- 1 boinc boinc       660 Oct 11 09:21 POMNDmG8LR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm5SPMDmUuqhqm.diag
[2025-10-11 09:21:20] -rw-r--r-- 1 boinc boinc     22171 Oct 11 09:21 stderr.txt
[2025-10-11 09:21:20] HITS file was successfully produced:
[2025-10-11 09:21:20] -rw------- 1 boinc boinc 189491547 Oct 11 09:20 shared/HITS.pool.root.1
[2025-10-11 09:21:20]  *** Contents of shared directory: ***
[2025-10-11 09:21:20] total 404924
[2025-10-11 09:21:20] -rw-r--r-- 2 boinc boinc 223557678 Oct 11 07:59 ATLAS.root_0
[2025-10-11 09:21:20] -rw-r--r-- 2 boinc boinc    569679 Oct 11 07:59 input.tar.gz
[2025-10-11 09:21:20] -rw-r--r-- 2 boinc boinc     15120 Oct 11 07:59 start_atlas.sh
[2025-10-11 09:21:20] -rw------- 1 boinc boinc 189491547 Oct 11 09:20 HITS.pool.root.1
[2025-10-11 09:21:20] -rw------- 1 boinc boinc    993280 Oct 11 09:21 result.tar.gz
09:21:22 (2889048): run_atlas exited; CPU time 13959.618324
09:21:22 (2889048): called boinc_finish(0)

</stderr_txt>
]]>

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