Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:13:45 (2491265): wrapper (7.7.26015): starting
05:13:45 (2491265): wrapper: running run_atlas (--nthreads 3)
[2025-10-11 05:13:45] Arguments: --nthreads 3
[2025-10-11 05:13:45] Threads: 3
[2025-10-11 05:13:45] Checking for CVMFS
[2025-10-11 05:13:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 05:13:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 05:13:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 05:13:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 05:13:45] 2.9.2.0 2127501 1087 74328 151571 3 9 28656888 36864001 0 130560 0 958300 99.978 162615 2291 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-11 05:13:45] CVMFS is ok
[2025-10-11 05:13:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 05:13:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 05:13:45] Further information can be found at the LHC@home message board.
[2025-10-11 05:13:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 05:13:45] Checking for apptainer binary...
[2025-10-11 05:13:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 05:13:45] Running /usr/bin/apptainer --version
[2025-10-11 05:13:45] apptainer version 1.4.1-1.1
[2025-10-11 05:13:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 05:13:45] thA385
[2025-10-11 05:13:45] apptainer works
[2025-10-11 05:13:45] Set ATHENA_PROC_NUMBER=3
[2025-10-11 05:13:45] Set ATHENA_CORE_NUMBER=3
[2025-10-11 05:13:45] Starting ATLAS job with PandaID=6837556603
[2025-10-11 05:13:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 06:37:04]  *** The last 200 lines of the pilot log: ***
[2025-10-11 06:37:04] 2025-10-11 04:36:03,402 | INFO     | all data control threads have been joined
[2025-10-11 06:37:04] 2025-10-11 04:36:03,424 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 06:37:04] 2025-10-11 04:36:03,424 | INFO     | aborting loop
[2025-10-11 06:37:04] 2025-10-11 04:36:03,624 | INFO     | all payload control threads have been joined
[2025-10-11 06:37:04] 2025-10-11 04:36:04,059 | INFO     | all job control threads have been joined
[2025-10-11 06:37:04] 2025-10-11 04:36:04,307 | INFO     | [job] queue monitor thread has finished
[2025-10-11 06:37:04] 2025-10-11 04:36:04,308 | INFO     | [job] retrieve thread has finished
[2025-10-11 06:37:04] 2025-10-11 04:36:04,365 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 06:37:04] 2025-10-11 04:36:04,404 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 06:37:04] 2025-10-11 04:36:04,404 | INFO     | [data] control thread has finished
[2025-10-11 06:37:04] 2025-10-11 04:36:04,407 | INFO     | [data] copytool_in thread has finished
[2025-10-11 06:37:04] 2025-10-11 04:36:04,430 | INFO     | [job] job monitor thread has finished
[2025-10-11 06:37:04] 2025-10-11 04:36:04,459 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 06:37:04] 2025-10-11 04:36:04,630 | INFO     | [payload] control thread has finished
[2025-10-11 06:37:04] 2025-10-11 04:36:04,872 | INFO     | [job] validate thread has finished
[2025-10-11 06:37:04] 2025-10-11 04:36:05,011 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 06:37:04] 2025-10-11 04:36:05,065 | INFO     | [job] control thread has finished
[2025-10-11 06:37:04] 2025-10-11 04:36:05,555 | INFO     | [payload] failed_post thread has finished
[2025-10-11 06:37:04] 2025-10-11 04:36:05,776 | INFO     | [payload] validate_post thread has finished
[2025-10-11 06:37:04] 2025-10-11 04:36:06,371 | INFO     | [data] copytool_out thread has finished
[2025-10-11 06:37:04] 2025-10-11 04:36:06,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 06:37:04] 2025-10-11 04:36:10,495 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 06:37:04] 2025-10-11 04:36:14,035 | INFO     | job.realtimelogging is not enabled
[2025-10-11 06:37:04] 2025-10-11 04:36:15,040 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 06:37:04] 2025-10-11 04:36:33,749 | INFO     | PID=2494983 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 06:37:04] 2025-10-11 04:36:33,750 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 06:37:04] 2025-10-11 04:36:33,750 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 06:37:04] 2025-10-11 04:36:33,750 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 06:37:04] 2025-10-11 04:36:58,187 | INFO     | [monitor] cgroup control has ended
[2025-10-11 06:37:04] 2025-10-11 04:36:59,250 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140176724576064)>', '<ExcThread(monitor, started 140176206567168)>']
[2025-10-11 06:37:04] 2025-10-11 04:36:59,887 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 06:37:04] 2025-10-11 04:36:59,887 | INFO     | [monitor] control thread has ended
[2025-10-11 06:37:04] 2025-10-11 04:37:04,276 | INFO     | all workflow threads have been joined
[2025-10-11 06:37:04] 2025-10-11 04:37:04,276 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 06:37:04] 2025-10-11 04:37:04,276 | INFO     | traces error code: 0
[2025-10-11 06:37:04] 2025-10-11 04:37:04,276 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 06:37:04] 2025-10-11 04:37:04,326 [wrapper] ==== pilot stdout END ====
[2025-10-11 06:37:04] 2025-10-11 04:37:04,329 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 06:37:04] 2025-10-11 04:37:04,331 [wrapper] pilotpid: 2494983
[2025-10-11 06:37:04] 2025-10-11 04:37:04,334 [wrapper] Pilot exit status: 0
[2025-10-11 06:37:04] 2025-10-11 04:37:04,341 [wrapper] pandaids: 6837556603
[2025-10-11 06:37:04] 2025-10-11 04:37:04,359 [wrapper] cleanup supervisor_pilot 2513336 2494984
[2025-10-11 06:37:04] 2025-10-11 04:37:04,362 [wrapper] Test setup, not cleaning
[2025-10-11 06:37:04] 2025-10-11 04:37:04,364 [wrapper] apfmon messages muted
[2025-10-11 06:37:04] 2025-10-11 04:37:04,367 [wrapper] ==== wrapper stdout END ====
[2025-10-11 06:37:04] 2025-10-11 04:37:04,369 [wrapper] ==== wrapper stderr END ====
[2025-10-11 06:37:04]  *** Error codes and diagnostics ***
[2025-10-11 06:37:04]     "exeErrorCode": 0,
[2025-10-11 06:37:04]     "exeErrorDiag": "",
[2025-10-11 06:37:04]     "pilotErrorCode": 0,
[2025-10-11 06:37:04]     "pilotErrorDiag": "",
[2025-10-11 06:37:04]  *** Listing of results directory ***
[2025-10-11 06:37:04] total 409452
[2025-10-11 06:37:04] -rw-r--r-- 1 boinc boinc    557409 Oct 10 11:06 pilot3.tar.gz
[2025-10-11 06:37:04] -rw-r--r-- 1 boinc boinc      5112 Oct 10 11:26 queuedata.json
[2025-10-11 06:37:04] -rwx------ 1 boinc boinc     36292 Oct 10 11:26 runpilot2-wrapper.sh
[2025-10-11 06:37:04] -rw-r--r-- 1 boinc boinc       100 Oct 11 05:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 06:37:04] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 05:13 run_atlas
[2025-10-11 06:37:04] -rw-r--r-- 1 boinc boinc       105 Oct 11 05:13 job.xml
[2025-10-11 06:37:04] -rw-r--r-- 2 boinc boinc 222667764 Oct 11 05:13 EVNT.46676267._001464.pool.root.1
[2025-10-11 06:37:04] -rw-r--r-- 2 boinc boinc    569679 Oct 11 05:13 input.tar.gz
[2025-10-11 06:37:04] -rw-r--r-- 2 boinc boinc     15120 Oct 11 05:13 start_atlas.sh
[2025-10-11 06:37:04] drwxrwx--x 2 boinc boinc      4096 Oct 11 05:13 shared
[2025-10-11 06:37:04] -rw-r--r-- 1 boinc boinc         0 Oct 11 05:13 boinc_setup_complete
[2025-10-11 06:37:04] -rw-r--r-- 1 boinc boinc      6446 Oct 11 05:13 init_data.xml
[2025-10-11 06:37:04] -rw-r--r-- 1 boinc boinc         0 Oct 11 05:13 boinc_lockfile
[2025-10-11 06:37:04] -rw-r--r-- 1 boinc boinc      2550 Oct 11 05:13 pandaJob.out
[2025-10-11 06:37:04] -rw------- 1 boinc boinc    975509 Oct 11 05:13 agis_schedconf.cvmfs.json
[2025-10-11 06:37:04] -rw------- 1 boinc boinc   1560580 Oct 11 05:13 agis_ddmendpoints.agis.ALL.json
[2025-10-11 06:37:04] drwx------ 5 boinc boinc      4096 Oct 11 05:13 pilot3
[2025-10-11 06:37:04] -rw------- 1 boinc boinc 190756588 Oct 11 06:35 HITS.46676269._036024.pool.root.1
[2025-10-11 06:37:04] -rw-r--r-- 1 boinc boinc       529 Oct 11 06:35 boinc_task_state.xml
[2025-10-11 06:37:04] -rw------- 1 boinc boinc      1019 Oct 11 06:35 memory_monitor_summary.json
[2025-10-11 06:37:04] -rw------- 1 boinc boinc    256223 Oct 11 06:35 log.46676269._036024.job.log.tgz.1
[2025-10-11 06:37:04] -rw------- 1 boinc boinc      7756 Oct 11 06:36 heartbeat.json
[2025-10-11 06:37:04] -rw------- 1 boinc boinc        95 Oct 11 06:36 pilot_heartbeat.json
[2025-10-11 06:37:04] -rw-r--r-- 1 boinc boinc        27 Oct 11 06:36 wrapper_checkpoint.txt
[2025-10-11 06:37:04] -rw-r--r-- 1 boinc boinc      8192 Oct 11 06:36 boinc_mmap_file
[2025-10-11 06:37:04] -rw------- 1 boinc boinc      4824 Oct 11 06:37 pilotlog.txt
[2025-10-11 06:37:04] -rw------- 1 boinc boinc    724403 Oct 11 06:37 log.46676269._036024.job.log.1
[2025-10-11 06:37:04] -rw------- 1 boinc boinc       357 Oct 11 06:37 output.list
[2025-10-11 06:37:04] -rw-r--r-- 1 boinc boinc       620 Oct 11 06:37 runtime_log
[2025-10-11 06:37:04] -rw------- 1 boinc boinc   1003520 Oct 11 06:37 result.tar.gz
[2025-10-11 06:37:04] -rw-r--r-- 1 boinc boinc      8777 Oct 11 06:37 runtime_log.err
[2025-10-11 06:37:04] -rw------- 1 boinc boinc       658 Oct 11 06:37 4gILDmdZOR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm9hPMDmk63dQo.diag
[2025-10-11 06:37:04] -rw-r--r-- 1 boinc boinc      7158 Oct 11 06:37 stderr.txt
[2025-10-11 06:37:04] HITS file was successfully produced:
[2025-10-11 06:37:04] -rw------- 1 boinc boinc 190756588 Oct 11 06:35 shared/HITS.pool.root.1
[2025-10-11 06:37:04]  *** Contents of shared directory: ***
[2025-10-11 06:37:04] total 405304
[2025-10-11 06:37:04] -rw-r--r-- 2 boinc boinc 222667764 Oct 11 05:13 ATLAS.root_0
[2025-10-11 06:37:04] -rw-r--r-- 2 boinc boinc    569679 Oct 11 05:13 input.tar.gz
[2025-10-11 06:37:04] -rw-r--r-- 2 boinc boinc     15120 Oct 11 05:13 start_atlas.sh
[2025-10-11 06:37:04] -rw------- 1 boinc boinc 190756588 Oct 11 06:35 HITS.pool.root.1
[2025-10-11 06:37:04] -rw------- 1 boinc boinc   1003520 Oct 11 06:37 result.tar.gz
06:37:05 (2491265): run_atlas exited; CPU time 14098.079338
06:37:05 (2491265): called boinc_finish(0)

</stderr_txt>
]]>

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