Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
22:25:07 (107577): wrapper (7.7.26015): starting
22:25:07 (107577): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 22:25:07] Arguments: --nthreads 4
[2025-10-10 22:25:07] Threads: 4
[2025-10-10 22:25:07] Checking for CVMFS
[2025-10-10 22:25:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 22:25:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 22:25:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 22:25:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 22:25:07] 2.13.2.0 53712 72 46236 151560 3 57 4017588 4096000 918 130560 0 122852 99.997 2731 153 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-10 22:25:07] CVMFS is ok
[2025-10-10 22:25:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 22:25:07] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-10 22:25:07] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-10 22:25:07] Further information can be found at the LHC@home message board.
[2025-10-10 22:25:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 22:25:07] Checking for apptainer binary...
[2025-10-10 22:25:07] apptainer is not installed, using version from CVMFS
[2025-10-10 22:25:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 22:25:07] pascal-Intel-Z790-Workstation
[2025-10-10 22:25:07] apptainer works
[2025-10-10 22:25:07] Set ATHENA_PROC_NUMBER=4
[2025-10-10 22:25:07] Set ATHENA_CORE_NUMBER=4
[2025-10-10 22:25:07] Starting ATLAS job with PandaID=6837331945
[2025-10-10 22:25:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 23:35:49]  *** The last 200 lines of the pilot log: ***
[2025-10-10 23:35:49]  replicas=None
[2025-10-10 23:35:49]  scope=mc23_13p6TeV
[2025-10-10 23:35:49]  status=None
[2025-10-10 23:35:49]  status_code=0
[2025-10-10 23:35:49]  storage_token=
[2025-10-10 23:35:49]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6837331945/log.46676269._015239.job.log.tgz.1
[2025-10-10 23:35:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/d0/log.46676269._015239.job.log.tgz.1
[2025-10-10 23:35:49]  workdir=None
[2025-10-10 23:35:49] ]
[2025-10-10 23:35:49] 2025-10-10 21:35:10,918 | INFO     | transferring file log.46676269._015239.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6837331945/log.46676269._015239.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-10 23:35:49] 2025-10-10 21:35:10,918 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6837331945/log.46676269._015239.job.log.tgz.1 /var/lib/boinc/slots/1/log.46676269._015239.job
[2025-10-10 23:35:49] 2025-10-10 21:35:10,928 | INFO     | adding to output.list: log.46676269._015239.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/d0/log.46676269._015239.job.log.tg
[2025-10-10 23:35:49] 2025-10-10 21:35:10,928 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 23:35:49] 2025-10-10 21:35:10,928 | INFO     | summary of transferred files:
[2025-10-10 23:35:49] 2025-10-10 21:35:10,928 | INFO     |  -- lfn=log.46676269._015239.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 23:35:49] 2025-10-10 21:35:10,929 | INFO     | stage-out finished correctly
[2025-10-10 23:35:49] 2025-10-10 21:35:11,466 | INFO     | PID=111416 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 23:35:49] 2025-10-10 21:35:12,466 | INFO     | time since job start (4190s) is within the limit (172800.0s)
[2025-10-10 23:35:49] 2025-10-10 21:35:12,577 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 23:35:49] 2025-10-10 21:35:13,365 | WARNING  | process 118063 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 23:35:49] 2025-10-10 21:35:13,365 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6837331945/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 23:35:49] 2025-10-10 21:35:13,392 | INFO     | number of running child processes to parent process 118063: 1
[2025-10-10 23:35:49] 2025-10-10 21:35:13,392 | INFO     | maximum number of monitored processes: 6
[2025-10-10 23:35:49] 2025-10-10 21:35:14,472 | INFO     | time since job start (4192s) is within the limit (172800.0s)
[2025-10-10 23:35:49] 2025-10-10 21:35:14,685 | INFO     | job 6837331945 has state=finished
[2025-10-10 23:35:49] 2025-10-10 21:35:14,685 | INFO     | preparing for final server update for job 6837331945 in state='finished'
[2025-10-10 23:35:49] 2025-10-10 21:35:14,685 | INFO     | this job has now completed (state=finished)
[2025-10-10 23:35:49] 2025-10-10 21:35:14,685 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 23:35:49] 2025-10-10 21:35:14,685 | INFO     | log transfer has been attempted: DONE
[2025-10-10 23:35:49] 2025-10-10 21:35:14,685 | INFO     | job 6837331945 has finished - writing final server update
[2025-10-10 23:35:49] 2025-10-10 21:35:14,685 | INFO     | total number of processed events: 400 (read)
[2025-10-10 23:35:49] 2025-10-10 21:35:14,686 | INFO     | executing command: lscpu
[2025-10-10 23:35:49] 2025-10-10 21:35:14,702 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 23:35:49] 2025-10-10 21:35:15,895 | INFO     | monitor loop #320: job 0:6837331945 is in state 'finished'
[2025-10-10 23:35:49] 2025-10-10 21:35:15,896 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 23:35:49] 2025-10-10 21:35:16,477 | INFO     | time since job start (4194s) is within the limit (172800.0s)
[2025-10-10 23:35:49] 2025-10-10 21:35:17,459 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 23:35:49] 2025-10-10 21:35:17,462 | INFO     | found 24 cores (24 cores per socket, 1 socket) , CPU MHz: 2056.71821875
[2025-10-10 23:35:49] 2025-10-10 21:35:17,464 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6837331945/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 23:35:49] 2025-10-10 21:35:17,465 | INFO     | extracted standard info from prmon json
[2025-10-10 23:35:49] 2025-10-10 21:35:17,465 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 23:35:49] 2025-10-10 21:35:17,465 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 23:35:49] 2025-10-10 21:35:17,465 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 23:35:49] 2025-10-10 21:35:17,465 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 23:35:49] 2025-10-10 21:35:17,466 | INFO     | fitting pss+swap vs Time
[2025-10-10 23:35:49] 2025-10-10 21:35:17,466 | INFO     | sum of square deviations: 73882315.5
[2025-10-10 23:35:49] 2025-10-10 21:35:17,466 | INFO     | sum of deviations: -9238006560.5
[2025-10-10 23:35:49] 2025-10-10 21:35:17,466 | INFO     | mean x: 1760130106.5
[2025-10-10 23:35:49] 2025-10-10 21:35:17,466 | INFO     | mean y: 2632331.14516129
[2025-10-10 23:35:49] 2025-10-10 21:35:17,466 | INFO     | -- intersect: 220083626830.84467
[2025-10-10 23:35:49] 2025-10-10 21:35:17,466 | INFO     | intersect: 220083626830.84467
[2025-10-10 23:35:49] 2025-10-10 21:35:17,467 | INFO     | chi2: 0.13593247283179474
[2025-10-10 23:35:49] 2025-10-10 21:35:17,467 | INFO     | -- intersect: 220083626830.84467
[2025-10-10 23:35:49] 2025-10-10 21:35:17,467 | INFO     | current memory leak: -125.04 B/s (using 62 data points, chi2=0.14)
[2025-10-10 23:35:49] 2025-10-10 21:35:17,467 | INFO     | could have reported an average CPU frequency of 2322 MHz (6 samples)
[2025-10-10 23:35:49] 2025-10-10 21:35:17,467 | INFO     | ..............................
[2025-10-10 23:35:49] 2025-10-10 21:35:17,467 | INFO     | . Timing measurements:
[2025-10-10 23:35:49] 2025-10-10 21:35:17,467 | INFO     | . get job = 0 s
[2025-10-10 23:35:49] 2025-10-10 21:35:17,467 | INFO     | . initial setup = 9 s
[2025-10-10 23:35:49] 2025-10-10 21:35:17,467 | INFO     | . payload setup = 2 s
[2025-10-10 23:35:49] 2025-10-10 21:35:17,467 | INFO     | . stage-in = 0 s
[2025-10-10 23:35:49] 2025-10-10 21:35:17,467 | INFO     | . payload execution = 4168 s
[2025-10-10 23:35:49] 2025-10-10 21:35:17,467 | INFO     | . stage-out = 0 s
[2025-10-10 23:35:49] 2025-10-10 21:35:17,467 | INFO     | . log creation = 0 s
[2025-10-10 23:35:49] 2025-10-10 21:35:17,467 | INFO     | ..............................
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | 
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | job summary report
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | --------------------------------------------------
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | PanDA job id: 6837331945
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | task id: 46676269
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | errors: (none)
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | pilot state: finished 
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | transexitcode: 0
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | exeerrorcode: 0
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | exeerrordiag: 
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | exitcode: 0
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | exitmsg: OK
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | cpuconsumptiontime: 15555 s
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | nevents: 400
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | neventsw: 0
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | pid: 118063
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | pgrp: 118063
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | corecount: 4
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | event service: False
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | sizes: {0: 2348854, 2: 2349116, 11: 2349144, 4175: 2384115, 4177: 2384115, 4182: 2384309}
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | --------------------------------------------------
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | 
[2025-10-10 23:35:49] 2025-10-10 21:35:17,968 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-10 23:35:49] 2025-10-10 21:35:17,981 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | job 6837331945 has completed (purged errors)
[2025-10-10 23:35:49] 2025-10-10 21:35:17,982 | INFO     | overall cleanup function is called
[2025-10-10 23:35:49] 2025-10-10 21:35:18,988 | INFO     | --- collectZombieJob: --- 10, [118063]
[2025-10-10 23:35:49] 2025-10-10 21:35:18,988 | INFO     | zombie collector waiting for pid 118063
[2025-10-10 23:35:49] 2025-10-10 21:35:18,988 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 23:35:49] 2025-10-10 21:35:18,988 | INFO     | collected zombie processes
[2025-10-10 23:35:49] 2025-10-10 21:35:18,988 | INFO     | will attempt to kill all subprocesses of pid=118063
[2025-10-10 23:35:49] 2025-10-10 21:35:19,035 | INFO     | process IDs to be killed: [118063] (in reverse order)
[2025-10-10 23:35:49] 2025-10-10 21:35:19,061 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 23:35:49] 2025-10-10 21:35:19,061 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 23:35:49] 2025-10-10 21:35:19,063 | INFO     | did not find any defunct processes belonging to 118063
[2025-10-10 23:35:49] 2025-10-10 21:35:19,065 | INFO     | did not find any defunct processes belonging to 118063
[2025-10-10 23:35:49] 2025-10-10 21:35:19,065 | INFO     | ready for new job
[2025-10-10 23:35:49] 2025-10-10 21:35:19,065 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 23:35:49] 2025-10-10 21:35:19,066 | INFO     | ***************************************
[2025-10-10 23:35:49] 2025-10-10 21:35:19,066 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 23:35:49] 2025-10-10 21:35:19,066 | INFO     | ***************************************
[2025-10-10 23:35:49] 2025-10-10 21:35:19,066 | INFO     | 
[2025-10-10 23:35:49] 2025-10-10 21:35:19,067 | INFO     | architecture information:
[2025-10-10 23:35:49] 2025-10-10 21:35:19,067 | INFO     | executing command: cat /etc/os-release
[2025-10-10 23:35:49] 2025-10-10 21:35:19,073 | INFO     | cat /etc/os-release:
[2025-10-10 23:35:49] NAME="CentOS Linux"
[2025-10-10 23:35:49] VERSION="7 (Core)"
[2025-10-10 23:35:49] ID="centos"
[2025-10-10 23:35:49] ID_LIKE="rhel fedora"
[2025-10-10 23:35:49] VERSION_ID="7"
[2025-10-10 23:35:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 23:35:49] ANSI_COLOR="0;31"
[2025-10-10 23:35:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 23:35:49] HOME_URL="https://www.centos.org/"
[2025-10-10 23:35:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 23:35:49] 
[2025-10-10 23:35:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 23:35:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 23:35:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 23:35:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 23:35:49] 
[2025-10-10 23:35:49] 2025-10-10 21:35:19,074 | INFO     | ***************************************
[2025-10-10 23:35:49] 2025-10-10 21:35:19,576 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-10 23:35:49] 2025-10-10 21:35:19,586 | INFO     | sufficient remaining disk space (407284744192 B)
[2025-10-10 23:35:49] 2025-10-10 21:35:19,586 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 23:35:49] 2025-10-10 21:35:19,586 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 23:35:49] 2025-10-10 21:35:19,586 | INFO     | update_server=False
[2025-10-10 23:35:49] 2025-10-10 21:35:19,586 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 23:35:49] 2025-10-10 21:35:19,586 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 23:35:49] 2025-10-10 21:35:19,586 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 23:35:49] 2025-10-10 21:35:19,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 23:35:49] 2025-10-10 21:35:19,586 | INFO     | aborting loop
[2025-10-10 23:35:49] 2025-10-10 21:35:19,643 | INFO     | all data control threads have been joined
[2025-10-10 23:35:49] 2025-10-10 21:35:20,078 | INFO     | all job control threads have been joined
[2025-10-10 23:35:49] 2025-10-10 21:35:20,587 | INFO     | [job] retrieve thread has finished
[2025-10-10 23:35:49] 2025-10-10 21:35:20,591 | INFO     | [job] job monitor thread has finished
[2025-10-10 23:35:49] 2025-10-10 21:35:20,648 | INFO     | [data] control thread has finished
[2025-10-10 23:35:49] 2025-10-10 21:35:21,046 | INFO     | all payload control threads have been joined
[2025-10-10 23:35:49] 2025-10-10 21:35:21,083 | INFO     | [job] control thread has finished
[2025-10-10 23:35:49] 2025-10-10 21:35:21,146 | INFO     | [payload] validate_post thread has finished
[2025-10-10 23:35:49] 2025-10-10 21:35:21,251 | INFO     | [data] copytool_in thread has finished
[2025-10-10 23:35:49] 2025-10-10 21:35:21,591 | INFO     | [data] copytool_out thread has finished
[2025-10-10 23:35:49] 2025-10-10 21:35:21,835 | INFO     | [payload] failed_post thread has finished
[2025-10-10 23:35:49] 2025-10-10 21:35:21,940 | INFO     | [job] validate thread has finished
[2025-10-10 23:35:49] 2025-10-10 21:35:22,012 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 23:35:49] 2025-10-10 21:35:22,032 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 23:35:49] 2025-10-10 21:35:22,052 | INFO     | [payload] control thread has finished
[2025-10-10 23:35:49] 2025-10-10 21:35:22,075 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 23:35:49] 2025-10-10 21:35:22,505 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 23:35:49] 2025-10-10 21:35:23,510 | INFO     | [job] queue monitor thread has finished
[2025-10-10 23:35:49] 2025-10-10 21:35:23,592 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 23:35:49] 2025-10-10 21:35:26,994 | INFO     | [monitor] cgroup control has ended
[2025-10-10 23:35:49] 2025-10-10 21:35:29,673 | INFO     | job.realtimelogging is not enabled
[2025-10-10 23:35:49] 2025-10-10 21:35:30,678 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 23:35:49] 2025-10-10 21:35:32,220 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132897420429120)>', '<ExcThread(monitor, started 132896849372928)>']
[2025-10-10 23:35:49] 2025-10-10 21:35:37,246 | INFO     | all workflow threads have been joined
[2025-10-10 23:35:49] 2025-10-10 21:35:37,246 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 23:35:49] 2025-10-10 21:35:37,246 | INFO     | traces error code: 0
[2025-10-10 23:35:49] 2025-10-10 21:35:37,246 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 23:35:49] 2025-10-10 21:35:49,622 | INFO     | PID=111416 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 23:35:49] 2025-10-10 21:35:49,622 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 23:35:49] 2025-10-10 21:35:49,622 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 23:35:49] 2025-10-10 21:35:49,622 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 23:35:49] 2025-10-10 21:35:49,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 23:35:49] 2025-10-10 21:35:49,622 | INFO     | [monitor] control thread has ended
[2025-10-10 23:35:49] 2025-10-10 21:35:49,663 [wrapper] ==== pilot stdout END ====
[2025-10-10 23:35:49] 2025-10-10 21:35:49,665 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 23:35:49] 2025-10-10 21:35:49,666 [wrapper] pilotpid: 111416
[2025-10-10 23:35:49] 2025-10-10 21:35:49,668 [wrapper] Pilot exit status: 0
[2025-10-10 23:35:49] 2025-10-10 21:35:49,672 [wrapper] pandaids: 6837331945
[2025-10-10 23:35:49] 2025-10-10 21:35:49,687 [wrapper] cleanup supervisor_pilot  141202 111417
[2025-10-10 23:35:49] 2025-10-10 21:35:49,688 [wrapper] Test setup, not cleaning
[2025-10-10 23:35:49] 2025-10-10 21:35:49,690 [wrapper] apfmon messages muted
[2025-10-10 23:35:49] 2025-10-10 21:35:49,691 [wrapper] ==== wrapper stdout END ====
[2025-10-10 23:35:49] 2025-10-10 21:35:49,692 [wrapper] ==== wrapper stderr END ====
[2025-10-10 23:35:49]  *** Error codes and diagnostics ***
[2025-10-10 23:35:49]     "exeErrorCode": 0,
[2025-10-10 23:35:49]     "exeErrorDiag": "",
[2025-10-10 23:35:49]     "pilotErrorCode": 0,
[2025-10-10 23:35:49]     "pilotErrorDiag": "",
[2025-10-10 23:35:49]  *** Listing of results directory ***
[2025-10-10 23:35:49] total 407064
[2025-10-10 23:35:49] -rw-r--r-- 1 boinc boinc    557409 oct.   9 12:52 pilot3.tar.gz
[2025-10-10 23:35:49] -rw-r--r-- 1 boinc boinc      5112 oct.   9 13:07 queuedata.json
[2025-10-10 23:35:49] -rwx------ 1 boinc boinc     36292 oct.   9 13:07 runpilot2-wrapper.sh
[2025-10-10 23:35:49] -rw-r--r-- 1 boinc boinc       100 oct.  10 22:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 23:35:49] -rwxr-xr-x 1 boinc boinc      7986 oct.  10 22:25 run_atlas
[2025-10-10 23:35:49] -rw-r--r-- 1 boinc boinc       105 oct.  10 22:25 job.xml
[2025-10-10 23:35:49] -rw-r--r-- 2 boinc boinc 218871833 oct.  10 22:25 EVNT.46676267._000627.pool.root.1
[2025-10-10 23:35:49] -rw-r--r-- 2 boinc boinc    569673 oct.  10 22:25 input.tar.gz
[2025-10-10 23:35:49] -rw-r--r-- 2 boinc boinc     15120 oct.  10 22:25 start_atlas.sh
[2025-10-10 23:35:49] drwxrwx--x 2 boinc boinc      4096 oct.  10 22:25 shared
[2025-10-10 23:35:49] -rw-r--r-- 1 boinc boinc         0 oct.  10 22:25 boinc_setup_complete
[2025-10-10 23:35:49] -rw-r--r-- 1 boinc boinc      9408 oct.  10 22:25 init_data.xml
[2025-10-10 23:35:49] -rw-r--r-- 1 boinc boinc         0 oct.  10 22:25 boinc_lockfile
[2025-10-10 23:35:49] -rw-r--r-- 1 boinc boinc      2548 oct.  10 22:25 pandaJob.out
[2025-10-10 23:35:49] -rw------- 1 boinc boinc    975533 oct.  10 22:25 agis_schedconf.cvmfs.json
[2025-10-10 23:35:49] -rw------- 1 boinc boinc   1560580 oct.  10 22:25 agis_ddmendpoints.agis.ALL.json
[2025-10-10 23:35:49] drwx------ 5 boinc boinc      4096 oct.  10 22:25 pilot3
[2025-10-10 23:35:49] -rw------- 1 boinc boinc 192291736 oct.  10 23:34 HITS.46676269._015239.pool.root.1
[2025-10-10 23:35:49] -rw------- 1 boinc boinc      1024 oct.  10 23:35 memory_monitor_summary.json
[2025-10-10 23:35:49] -rw------- 1 boinc boinc    256664 oct.  10 23:35 log.46676269._015239.job.log.tgz.1
[2025-10-10 23:35:49] -rw-r--r-- 1 boinc boinc       529 oct.  10 23:35 boinc_task_state.xml
[2025-10-10 23:35:49] -rw------- 1 boinc boinc      7770 oct.  10 23:35 heartbeat.json
[2025-10-10 23:35:49] -rw-r--r-- 1 boinc boinc        27 oct.  10 23:35 wrapper_checkpoint.txt
[2025-10-10 23:35:49] -rw-r--r-- 1 boinc boinc      8192 oct.  10 23:35 boinc_mmap_file
[2025-10-10 23:35:49] -rw------- 1 boinc boinc       746 oct.  10 23:35 pilotlog.txt
[2025-10-10 23:35:49] -rw------- 1 boinc boinc        95 oct.  10 23:35 pilot_heartbeat.json
[2025-10-10 23:35:49] -rw------- 1 boinc boinc    625807 oct.  10 23:35 log.46676269._015239.job.log.1
[2025-10-10 23:35:49] -rw------- 1 boinc boinc       357 oct.  10 23:35 output.list
[2025-10-10 23:35:49] -rw-r--r-- 1 boinc boinc       620 oct.  10 23:35 runtime_log
[2025-10-10 23:35:49] -rw------- 1 boinc boinc    901120 oct.  10 23:35 result.tar.gz
[2025-10-10 23:35:49] -rw------- 1 boinc boinc       660 oct.  10 23:35 TtcKDmYf3Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmIiNMDmZ2RjAo.diag
[2025-10-10 23:35:49] -rw-r--r-- 1 boinc boinc      8761 oct.  10 23:35 runtime_log.err
[2025-10-10 23:35:49] -rw-r--r-- 1 boinc boinc     21998 oct.  10 23:35 stderr.txt
[2025-10-10 23:35:49] HITS file was successfully produced:
[2025-10-10 23:35:49] -rw------- 1 boinc boinc 192291736 oct.  10 23:34 shared/HITS.pool.root.1
[2025-10-10 23:35:49]  *** Contents of shared directory: ***
[2025-10-10 23:35:49] total 402996
[2025-10-10 23:35:49] -rw-r--r-- 2 boinc boinc 218871833 oct.  10 22:25 ATLAS.root_0
[2025-10-10 23:35:49] -rw-r--r-- 2 boinc boinc    569673 oct.  10 22:25 input.tar.gz
[2025-10-10 23:35:49] -rw-r--r-- 2 boinc boinc     15120 oct.  10 22:25 start_atlas.sh
[2025-10-10 23:35:49] -rw------- 1 boinc boinc 192291736 oct.  10 23:34 HITS.pool.root.1
[2025-10-10 23:35:49] -rw------- 1 boinc boinc    901120 oct.  10 23:35 result.tar.gz
23:35:51 (107577): run_atlas exited; CPU time 15599.645170
23:35:51 (107577): called boinc_finish(0)

</stderr_txt>
]]>

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