Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
21:50:17 (80676): wrapper (7.7.26015): starting
21:50:17 (80676): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 21:50:17] Arguments: --nthreads 4
[2025-10-10 21:50:17] Threads: 4
[2025-10-10 21:50:17] Checking for CVMFS
[2025-10-10 21:50:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 21:50:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 21:50:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 21:50:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 21:50:18] 2.13.2.0 53712 37 44152 151559 2 20 4011303 4096001 918 130560 0 55478 99.997 1366 135 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-10 21:50:18] CVMFS is ok
[2025-10-10 21:50:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 21:50:18] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-10 21:50:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-10 21:50:18] Further information can be found at the LHC@home message board.
[2025-10-10 21:50:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 21:50:18] Checking for apptainer binary...
[2025-10-10 21:50:18] apptainer is not installed, using version from CVMFS
[2025-10-10 21:50:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 21:50:18] pascal-Intel-Z790-Workstation
[2025-10-10 21:50:18] apptainer works
[2025-10-10 21:50:18] Set ATHENA_PROC_NUMBER=4
[2025-10-10 21:50:18] Set ATHENA_CORE_NUMBER=4
[2025-10-10 21:50:18] Starting ATLAS job with PandaID=6837331879
[2025-10-10 21:50:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 23:01:43]  *** The last 200 lines of the pilot log: ***
[2025-10-10 23:01:43]  protocol_id=None
[2025-10-10 23:01:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-10 23:01:43]  replicas=None
[2025-10-10 23:01:43]  scope=mc23_13p6TeV
[2025-10-10 23:01:43]  status=None
[2025-10-10 23:01:43]  status_code=0
[2025-10-10 23:01:43]  storage_token=
[2025-10-10 23:01:43]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6837331879/log.46676269._015173.job.log.tgz.1
[2025-10-10 23:01:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/13/log.46676269._015173.job.log.tgz.1
[2025-10-10 23:01:43]  workdir=None
[2025-10-10 23:01:43] ]
[2025-10-10 23:01:43] 2025-10-10 21:01:00,427 | INFO     | transferring file log.46676269._015173.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6837331879/log.46676269._015173.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-10 23:01:43] 2025-10-10 21:01:00,427 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6837331879/log.46676269._015173.job.log.tgz.1 /var/lib/boinc/slots/2/log.46676269._015173.job
[2025-10-10 23:01:43] 2025-10-10 21:01:00,437 | INFO     | adding to output.list: log.46676269._015173.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/13/log.46676269._015173.job.log.tg
[2025-10-10 23:01:43] 2025-10-10 21:01:00,438 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 23:01:43] 2025-10-10 21:01:00,438 | INFO     | summary of transferred files:
[2025-10-10 23:01:43] 2025-10-10 21:01:00,438 | INFO     |  -- lfn=log.46676269._015173.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 23:01:43] 2025-10-10 21:01:00,438 | INFO     | stage-out finished correctly
[2025-10-10 23:01:43] 2025-10-10 21:01:01,371 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 23:01:43] 2025-10-10 21:01:01,936 | INFO     | time since job start (4230s) is within the limit (172800.0s)
[2025-10-10 23:01:43] 2025-10-10 21:01:02,707 | INFO     | monitor loop #324: job 0:6837331879 is in state 'finished'
[2025-10-10 23:01:43] 2025-10-10 21:01:02,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 23:01:43] 2025-10-10 21:01:02,965 | INFO     | job 6837331879 has state=finished
[2025-10-10 23:01:43] 2025-10-10 21:01:02,966 | INFO     | preparing for final server update for job 6837331879 in state='finished'
[2025-10-10 23:01:43] 2025-10-10 21:01:02,966 | INFO     | this job has now completed (state=finished)
[2025-10-10 23:01:43] 2025-10-10 21:01:02,966 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 23:01:43] 2025-10-10 21:01:02,966 | INFO     | log transfer has been attempted: DONE
[2025-10-10 23:01:43] 2025-10-10 21:01:02,966 | INFO     | job 6837331879 has finished - writing final server update
[2025-10-10 23:01:43] 2025-10-10 21:01:02,966 | INFO     | total number of processed events: 400 (read)
[2025-10-10 23:01:43] 2025-10-10 21:01:02,967 | INFO     | executing command: lscpu
[2025-10-10 23:01:43] 2025-10-10 21:01:02,984 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 23:01:43] 2025-10-10 21:01:03,941 | INFO     | time since job start (4232s) is within the limit (172800.0s)
[2025-10-10 23:01:43] 2025-10-10 21:01:03,942 | INFO     | 4239s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-10 23:01:43] 2025-10-10 21:01:04,947 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 23:01:43] 2025-10-10 21:01:04,955 | INFO     | found 24 cores (24 cores per socket, 1 socket) , CPU MHz: 2408.66328125
[2025-10-10 23:01:43] 2025-10-10 21:01:04,959 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6837331879/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 23:01:43] 2025-10-10 21:01:04,961 | INFO     | extracted standard info from prmon json
[2025-10-10 23:01:43] 2025-10-10 21:01:04,961 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 23:01:43] 2025-10-10 21:01:04,961 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 23:01:43] 2025-10-10 21:01:04,961 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 23:01:43] 2025-10-10 21:01:04,961 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 23:01:43] 2025-10-10 21:01:04,962 | INFO     | fitting pss+swap vs Time
[2025-10-10 23:01:43] 2025-10-10 21:01:04,962 | INFO     | sum of square deviations: 73882315.5
[2025-10-10 23:01:43] 2025-10-10 21:01:04,962 | INFO     | sum of deviations: -9786591485.999998
[2025-10-10 23:01:43] 2025-10-10 21:01:04,962 | INFO     | mean x: 1760128014.5
[2025-10-10 23:01:43] 2025-10-10 21:01:04,962 | INFO     | mean y: 2459501.0967741935
[2025-10-10 23:01:43] 2025-10-10 21:01:04,962 | INFO     | -- intersect: 233152350979.19727
[2025-10-10 23:01:43] 2025-10-10 21:01:04,963 | INFO     | intersect: 233152350979.19727
[2025-10-10 23:01:43] 2025-10-10 21:01:04,963 | INFO     | chi2: 0.09981372692970052
[2025-10-10 23:01:43] 2025-10-10 21:01:04,963 | INFO     | -- intersect: 233152350979.19727
[2025-10-10 23:01:43] 2025-10-10 21:01:04,963 | INFO     | current memory leak: -132.46 B/s (using 62 data points, chi2=0.10)
[2025-10-10 23:01:43] 2025-10-10 21:01:04,963 | INFO     | could have reported an average CPU frequency of 2429 MHz (6 samples)
[2025-10-10 23:01:43] 2025-10-10 21:01:04,963 | INFO     | ..............................
[2025-10-10 23:01:43] 2025-10-10 21:01:04,963 | INFO     | . Timing measurements:
[2025-10-10 23:01:43] 2025-10-10 21:01:04,963 | INFO     | . get job = 0 s
[2025-10-10 23:01:43] 2025-10-10 21:01:04,963 | INFO     | . initial setup = 6 s
[2025-10-10 23:01:43] 2025-10-10 21:01:04,963 | INFO     | . payload setup = 2 s
[2025-10-10 23:01:43] 2025-10-10 21:01:04,963 | INFO     | . stage-in = 0 s
[2025-10-10 23:01:43] 2025-10-10 21:01:04,963 | INFO     | . payload execution = 4210 s
[2025-10-10 23:01:43] 2025-10-10 21:01:04,964 | INFO     | . stage-out = 0 s
[2025-10-10 23:01:43] 2025-10-10 21:01:04,964 | INFO     | . log creation = 0 s
[2025-10-10 23:01:43] 2025-10-10 21:01:04,964 | INFO     | ..............................
[2025-10-10 23:01:43] 2025-10-10 21:01:05,113 | INFO     | PID=84604 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 23:01:43] 2025-10-10 21:01:05,113 | INFO     | .. there are 2 such processes running
[2025-10-10 23:01:43] 2025-10-10 21:01:05,289 | INFO     | 
[2025-10-10 23:01:43] 2025-10-10 21:01:05,289 | INFO     | job summary report
[2025-10-10 23:01:43] 2025-10-10 21:01:05,289 | INFO     | --------------------------------------------------
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | PanDA job id: 6837331879
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | task id: 46676269
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | errors: (none)
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | pilot state: finished 
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | transexitcode: 0
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | exeerrorcode: 0
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | exeerrordiag: 
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | exitcode: 0
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | exitmsg: OK
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | cpuconsumptiontime: 15837 s
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | nevents: 400
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | neventsw: 0
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | pid: 91247
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | pgrp: 91247
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | corecount: 4
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | event service: False
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | sizes: {0: 2348855, 2: 2349117, 11: 2349145, 4216: 2375241, 4217: 2384239, 4218: 2384295, 4221: 2384617}
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | --------------------------------------------------
[2025-10-10 23:01:43] 2025-10-10 21:01:05,290 | INFO     | 
[2025-10-10 23:01:43] 2025-10-10 21:01:05,291 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-10 23:01:43] 2025-10-10 21:01:05,301 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 23:01:43] 2025-10-10 21:01:05,301 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 23:01:43] 2025-10-10 21:01:05,301 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 23:01:43] 2025-10-10 21:01:05,301 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 23:01:43] 2025-10-10 21:01:05,301 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 23:01:43] 2025-10-10 21:01:05,301 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 23:01:43] 2025-10-10 21:01:05,301 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 23:01:43] 2025-10-10 21:01:05,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 23:01:43] 2025-10-10 21:01:05,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 23:01:43] 2025-10-10 21:01:05,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 23:01:43] 2025-10-10 21:01:05,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 23:01:43] 2025-10-10 21:01:05,301 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 23:01:43] 2025-10-10 21:01:05,301 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 23:01:43] 2025-10-10 21:01:05,301 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 23:01:43] 2025-10-10 21:01:05,302 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 23:01:43] 2025-10-10 21:01:05,302 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 23:01:43] 2025-10-10 21:01:05,302 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 23:01:43] 2025-10-10 21:01:05,302 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 23:01:43] 2025-10-10 21:01:05,302 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 23:01:43] 2025-10-10 21:01:05,302 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 23:01:43] 2025-10-10 21:01:05,302 | INFO     | job 6837331879 has completed (purged errors)
[2025-10-10 23:01:43] 2025-10-10 21:01:05,302 | INFO     | overall cleanup function is called
[2025-10-10 23:01:43] 2025-10-10 21:01:06,308 | INFO     | --- collectZombieJob: --- 10, [91247]
[2025-10-10 23:01:43] 2025-10-10 21:01:06,309 | INFO     | zombie collector waiting for pid 91247
[2025-10-10 23:01:43] 2025-10-10 21:01:06,309 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 23:01:43] 2025-10-10 21:01:06,309 | INFO     | collected zombie processes
[2025-10-10 23:01:43] 2025-10-10 21:01:06,309 | INFO     | will attempt to kill all subprocesses of pid=91247
[2025-10-10 23:01:43] 2025-10-10 21:01:06,397 | INFO     | process IDs to be killed: [91247] (in reverse order)
[2025-10-10 23:01:43] 2025-10-10 21:01:06,429 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 23:01:43] 2025-10-10 21:01:06,429 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 23:01:43] 2025-10-10 21:01:06,432 | INFO     | did not find any defunct processes belonging to 91247
[2025-10-10 23:01:43] 2025-10-10 21:01:06,435 | INFO     | did not find any defunct processes belonging to 91247
[2025-10-10 23:01:43] 2025-10-10 21:01:06,435 | INFO     | ready for new job
[2025-10-10 23:01:43] 2025-10-10 21:01:06,435 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 23:01:43] 2025-10-10 21:01:06,436 | INFO     | ***************************************
[2025-10-10 23:01:43] 2025-10-10 21:01:06,436 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 23:01:43] 2025-10-10 21:01:06,436 | INFO     | ***************************************
[2025-10-10 23:01:43] 2025-10-10 21:01:06,436 | INFO     | 
[2025-10-10 23:01:43] 2025-10-10 21:01:06,437 | INFO     | architecture information:
[2025-10-10 23:01:43] 2025-10-10 21:01:06,437 | INFO     | executing command: cat /etc/os-release
[2025-10-10 23:01:43] 2025-10-10 21:01:06,445 | INFO     | cat /etc/os-release:
[2025-10-10 23:01:43] NAME="CentOS Linux"
[2025-10-10 23:01:43] VERSION="7 (Core)"
[2025-10-10 23:01:43] ID="centos"
[2025-10-10 23:01:43] ID_LIKE="rhel fedora"
[2025-10-10 23:01:43] VERSION_ID="7"
[2025-10-10 23:01:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 23:01:43] ANSI_COLOR="0;31"
[2025-10-10 23:01:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 23:01:43] HOME_URL="https://www.centos.org/"
[2025-10-10 23:01:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 23:01:43] 
[2025-10-10 23:01:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 23:01:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 23:01:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 23:01:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 23:01:43] 
[2025-10-10 23:01:43] 2025-10-10 21:01:06,445 | INFO     | ***************************************
[2025-10-10 23:01:43] 2025-10-10 21:01:06,947 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-10 23:01:43] 2025-10-10 21:01:06,957 | INFO     | sufficient remaining disk space (407312007168 B)
[2025-10-10 23:01:43] 2025-10-10 21:01:06,957 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 23:01:43] 2025-10-10 21:01:06,958 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 23:01:43] 2025-10-10 21:01:06,958 | INFO     | update_server=False
[2025-10-10 23:01:43] 2025-10-10 21:01:06,958 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 23:01:43] 2025-10-10 21:01:06,958 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 23:01:43] 2025-10-10 21:01:06,958 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 23:01:43] 2025-10-10 21:01:06,958 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 23:01:43] 2025-10-10 21:01:06,958 | INFO     | aborting loop
[2025-10-10 23:01:43] 2025-10-10 21:01:07,296 | INFO     | all data control threads have been joined
[2025-10-10 23:01:43] 2025-10-10 21:01:07,416 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 23:01:43] 2025-10-10 21:01:07,444 | INFO     | all job control threads have been joined
[2025-10-10 23:01:43] 2025-10-10 21:01:07,962 | INFO     | [job] retrieve thread has finished
[2025-10-10 23:01:43] 2025-10-10 21:01:07,963 | INFO     | [job] job monitor thread has finished
[2025-10-10 23:01:43] 2025-10-10 21:01:07,963 | INFO     | [job] queue monitor thread has finished
[2025-10-10 23:01:43] 2025-10-10 21:01:07,987 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 23:01:43] 2025-10-10 21:01:08,236 | INFO     | all payload control threads have been joined
[2025-10-10 23:01:43] 2025-10-10 21:01:08,300 | INFO     | [data] control thread has finished
[2025-10-10 23:01:43] 2025-10-10 21:01:08,370 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 23:01:43] 2025-10-10 21:01:08,371 | INFO     | [data] copytool_in thread has finished
[2025-10-10 23:01:43] 2025-10-10 21:01:08,449 | INFO     | [job] control thread has finished
[2025-10-10 23:01:43] 2025-10-10 21:01:08,580 | INFO     | [payload] failed_post thread has finished
[2025-10-10 23:01:43] 2025-10-10 21:01:08,963 | INFO     | [data] copytool_out thread has finished
[2025-10-10 23:01:43] 2025-10-10 21:01:09,034 | INFO     | [payload] validate_post thread has finished
[2025-10-10 23:01:43] 2025-10-10 21:01:09,241 | INFO     | [payload] control thread has finished
[2025-10-10 23:01:43] 2025-10-10 21:01:09,395 | INFO     | [job] validate thread has finished
[2025-10-10 23:01:43] 2025-10-10 21:01:09,444 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 23:01:43] 2025-10-10 21:01:11,421 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 23:01:43] 2025-10-10 21:01:17,668 | INFO     | job.realtimelogging is not enabled
[2025-10-10 23:01:43] 2025-10-10 21:01:18,674 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 23:01:43] 2025-10-10 21:01:36,340 | INFO     | [monitor] cgroup control has ended
[2025-10-10 23:01:43] 2025-10-10 21:01:37,285 | INFO     | PID=84604 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 23:01:43] 2025-10-10 21:01:37,285 | INFO     | .. there are 2 such processes running
[2025-10-10 23:01:43] 2025-10-10 21:01:37,285 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 23:01:43] 2025-10-10 21:01:37,285 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 23:01:43] 2025-10-10 21:01:37,285 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 23:01:43] 2025-10-10 21:01:38,280 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134474050316096)>', '<ExcThread(monitor, started 134473647634176)>']
[2025-10-10 23:01:43] 2025-10-10 21:01:38,290 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 23:01:43] 2025-10-10 21:01:38,290 | INFO     | [monitor] control thread has ended
[2025-10-10 23:01:43] 2025-10-10 21:01:43,305 | INFO     | all workflow threads have been joined
[2025-10-10 23:01:43] 2025-10-10 21:01:43,305 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 23:01:43] 2025-10-10 21:01:43,306 | INFO     | traces error code: 0
[2025-10-10 23:01:43] 2025-10-10 21:01:43,306 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 23:01:43] 2025-10-10 21:01:43,370 [wrapper] ==== pilot stdout END ====
[2025-10-10 23:01:43] 2025-10-10 21:01:43,371 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 23:01:43] 2025-10-10 21:01:43,373 [wrapper] pilotpid: 84604
[2025-10-10 23:01:43] 2025-10-10 21:01:43,374 [wrapper] Pilot exit status: 0
[2025-10-10 23:01:43] 2025-10-10 21:01:43,379 [wrapper] pandaids: 6837331879
[2025-10-10 23:01:43] 2025-10-10 21:01:43,399 [wrapper] cleanup supervisor_pilot  128286 84605
[2025-10-10 23:01:43] 2025-10-10 21:01:43,400 [wrapper] Test setup, not cleaning
[2025-10-10 23:01:43] 2025-10-10 21:01:43,402 [wrapper] apfmon messages muted
[2025-10-10 23:01:43] 2025-10-10 21:01:43,403 [wrapper] ==== wrapper stdout END ====
[2025-10-10 23:01:43] 2025-10-10 21:01:43,404 [wrapper] ==== wrapper stderr END ====
[2025-10-10 23:01:43]  *** Error codes and diagnostics ***
[2025-10-10 23:01:43]     "exeErrorCode": 0,
[2025-10-10 23:01:43]     "exeErrorDiag": "",
[2025-10-10 23:01:43]     "pilotErrorCode": 0,
[2025-10-10 23:01:43]     "pilotErrorDiag": "",
[2025-10-10 23:01:43]  *** Listing of results directory ***
[2025-10-10 23:01:43] total 416024
[2025-10-10 23:01:43] -rw-r--r-- 1 boinc boinc    557409 oct.   9 12:52 pilot3.tar.gz
[2025-10-10 23:01:43] -rw-r--r-- 1 boinc boinc      5112 oct.   9 13:02 queuedata.json
[2025-10-10 23:01:43] -rwx------ 1 boinc boinc     36292 oct.   9 13:03 runpilot2-wrapper.sh
[2025-10-10 23:01:43] -rw-r--r-- 1 boinc boinc       100 oct.  10 21:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 23:01:43] -rwxr-xr-x 1 boinc boinc      7986 oct.  10 21:50 run_atlas
[2025-10-10 23:01:43] -rw-r--r-- 1 boinc boinc       105 oct.  10 21:50 job.xml
[2025-10-10 23:01:43] -rw-r--r-- 2 boinc boinc 222021015 oct.  10 21:50 EVNT.46676267._000623.pool.root.1
[2025-10-10 23:01:43] -rw-r--r-- 2 boinc boinc    569680 oct.  10 21:50 input.tar.gz
[2025-10-10 23:01:43] -rw-r--r-- 2 boinc boinc     15120 oct.  10 21:50 start_atlas.sh
[2025-10-10 23:01:43] drwxrwx--x 2 boinc boinc      4096 oct.  10 21:50 shared
[2025-10-10 23:01:43] -rw-r--r-- 1 boinc boinc         0 oct.  10 21:50 boinc_setup_complete
[2025-10-10 23:01:43] -rw-r--r-- 1 boinc boinc      9408 oct.  10 21:50 init_data.xml
[2025-10-10 23:01:43] -rw-r--r-- 1 boinc boinc         0 oct.  10 21:50 boinc_lockfile
[2025-10-10 23:01:43] -rw-r--r-- 1 boinc boinc      2549 oct.  10 21:50 pandaJob.out
[2025-10-10 23:01:43] -rw------- 1 boinc boinc    975541 oct.  10 21:50 agis_schedconf.cvmfs.json
[2025-10-10 23:01:43] -rw------- 1 boinc boinc   1560580 oct.  10 21:50 agis_ddmendpoints.agis.ALL.json
[2025-10-10 23:01:43] drwx------ 5 boinc boinc      4096 oct.  10 21:50 pilot3
[2025-10-10 23:01:43] -rw------- 1 boinc boinc 198267062 oct.  10 23:00 HITS.46676269._015173.pool.root.1
[2025-10-10 23:01:43] -rw-r--r-- 1 boinc boinc       529 oct.  10 23:00 boinc_task_state.xml
[2025-10-10 23:01:43] -rw------- 1 boinc boinc      1011 oct.  10 23:00 memory_monitor_summary.json
[2025-10-10 23:01:43] -rw------- 1 boinc boinc        95 oct.  10 23:00 pilot_heartbeat.json
[2025-10-10 23:01:43] -rw------- 1 boinc boinc    269259 oct.  10 23:01 log.46676269._015173.job.log.tgz.1
[2025-10-10 23:01:43] -rw------- 1 boinc boinc      7767 oct.  10 23:01 heartbeat.json
[2025-10-10 23:01:43] -rw-r--r-- 1 boinc boinc      8192 oct.  10 23:01 boinc_mmap_file
[2025-10-10 23:01:43] -rw-r--r-- 1 boinc boinc        27 oct.  10 23:01 wrapper_checkpoint.txt
[2025-10-10 23:01:43] -rw------- 1 boinc boinc      4894 oct.  10 23:01 pilotlog.txt
[2025-10-10 23:01:43] -rw------- 1 boinc boinc    636867 oct.  10 23:01 log.46676269._015173.job.log.1
[2025-10-10 23:01:43] -rw------- 1 boinc boinc       357 oct.  10 23:01 output.list
[2025-10-10 23:01:43] -rw-r--r-- 1 boinc boinc       620 oct.  10 23:01 runtime_log
[2025-10-10 23:01:43] -rw------- 1 boinc boinc    921600 oct.  10 23:01 result.tar.gz
[2025-10-10 23:01:43] -rw------- 1 boinc boinc       660 oct.  10 23:01 YbCNDmSb3Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4SZNDmrBvGAn.diag
[2025-10-10 23:01:43] -rw-r--r-- 1 boinc boinc      8761 oct.  10 23:01 runtime_log.err
[2025-10-10 23:01:43] -rw-r--r-- 1 boinc boinc     21891 oct.  10 23:01 stderr.txt
[2025-10-10 23:01:43] HITS file was successfully produced:
[2025-10-10 23:01:43] -rw------- 1 boinc boinc 198267062 oct.  10 23:00 shared/HITS.pool.root.1
[2025-10-10 23:01:43]  *** Contents of shared directory: ***
[2025-10-10 23:01:43] total 411928
[2025-10-10 23:01:43] -rw-r--r-- 2 boinc boinc 222021015 oct.  10 21:50 ATLAS.root_0
[2025-10-10 23:01:43] -rw-r--r-- 2 boinc boinc    569680 oct.  10 21:50 input.tar.gz
[2025-10-10 23:01:43] -rw-r--r-- 2 boinc boinc     15120 oct.  10 21:50 start_atlas.sh
[2025-10-10 23:01:43] -rw------- 1 boinc boinc 198267062 oct.  10 23:00 HITS.pool.root.1
[2025-10-10 23:01:43] -rw------- 1 boinc boinc    921600 oct.  10 23:01 result.tar.gz
23:01:44 (80676): run_atlas exited; CPU time 15884.666580
23:01:44 (80676): called boinc_finish(0)

</stderr_txt>
]]>

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