Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
17:44:28 (814319): wrapper (7.7.26015): starting
17:44:28 (814319): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 17:44:28] Arguments: --nthreads 4
[2025-10-10 17:44:28] Threads: 4
[2025-10-10 17:44:28] Checking for CVMFS
[2025-10-10 17:44:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 17:44:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 17:44:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 17:44:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 17:44:29] 2.12.7.0 2326568 2235 60424 151565 1 188 3355480 4096001 917 130560 0 3021113 99.974 77346 398 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-10 17:44:29] CVMFS is ok
[2025-10-10 17:44:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 17:44:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 17:44:29] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-10 17:44:29] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-10 17:44:29] Further information can be found at the LHC@home message board.
[2025-10-10 17:44:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 17:44:29] Checking for apptainer binary...
[2025-10-10 17:44:29] apptainer is not installed, using version from CVMFS
[2025-10-10 17:44:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 17:44:29] X570UD
[2025-10-10 17:44:29] apptainer works
[2025-10-10 17:44:29] Set ATHENA_PROC_NUMBER=4
[2025-10-10 17:44:29] Set ATHENA_CORE_NUMBER=4
[2025-10-10 17:44:29] Starting ATLAS job with PandaID=6837558537
[2025-10-10 17:44:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc3/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 19:36:59]  *** The last 200 lines of the pilot log: ***
[2025-10-10 19:36:59] 2025-10-11 01:36:14,178 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 19:36:59] 2025-10-11 01:36:14,676 | INFO     | time since job start (6692s) is within the limit (172800.0s)
[2025-10-10 19:36:59] 2025-10-11 01:36:15,361 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 19:36:59] 2025-10-11 01:36:15,364 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4025.5208125
[2025-10-10 19:36:59] 2025-10-11 01:36:15,368 | INFO     | using path: /var/lib/boinc3/slots/0/PanDA_Pilot-6837558537/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 19:36:59] 2025-10-11 01:36:15,368 | INFO     | extracted standard info from prmon json
[2025-10-10 19:36:59] 2025-10-11 01:36:15,368 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 19:36:59] 2025-10-11 01:36:15,368 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 19:36:59] 2025-10-11 01:36:15,369 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 19:36:59] 2025-10-11 01:36:15,369 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 19:36:59] 2025-10-11 01:36:15,370 | INFO     | fitting pss+swap vs Time
[2025-10-10 19:36:59] 2025-10-11 01:36:15,370 | INFO     | sum of square deviations: 401533110.0
[2025-10-10 19:36:59] 2025-10-11 01:36:15,370 | INFO     | sum of deviations: 2504323036.0
[2025-10-10 19:36:59] 2025-10-11 01:36:15,370 | INFO     | mean x: 1760143201.0
[2025-10-10 19:36:59] 2025-10-11 01:36:15,371 | INFO     | mean y: 2343213.0
[2025-10-10 19:36:59] 2025-10-11 01:36:15,371 | INFO     | -- intersect: -10975499099.737492
[2025-10-10 19:36:59] 2025-10-11 01:36:15,371 | INFO     | intersect: -10975499099.737492
[2025-10-10 19:36:59] 2025-10-11 01:36:15,371 | INFO     | chi2: 1.5121272130761938
[2025-10-10 19:36:59] 2025-10-11 01:36:15,371 | INFO     | sum of square deviations: 348769330.0
[2025-10-10 19:36:59] 2025-10-11 01:36:15,371 | INFO     | sum of deviations: 2726100400.5000005
[2025-10-10 19:36:59] 2025-10-11 01:36:15,371 | INFO     | mean x: 1760143048.5
[2025-10-10 19:36:59] 2025-10-11 01:36:15,371 | INFO     | mean y: 2343854.355769231
[2025-10-10 19:36:59] 2025-10-11 01:36:15,371 | INFO     | -- intersect: -13755536373.969185
[2025-10-10 19:36:59] 2025-10-11 01:36:15,371 | INFO     | intersect: -13755536373.969185
[2025-10-10 19:36:59] 2025-10-11 01:36:15,371 | INFO     | chi2: 1.5149717765885435
[2025-10-10 19:36:59] 2025-10-11 01:36:15,372 | INFO     | current chi2=1.5149717765885435 (change=-0.18811668011469132 %)
[2025-10-10 19:36:59] 2025-10-11 01:36:15,372 | INFO     | right removable region: 103
[2025-10-10 19:36:59] 2025-10-11 01:36:15,372 | INFO     | sum of square deviations: 348769330.0
[2025-10-10 19:36:59] 2025-10-11 01:36:15,372 | INFO     | sum of deviations: -10801584912.5
[2025-10-10 19:36:59] 2025-10-11 01:36:15,372 | INFO     | mean x: 1760143353.5
[2025-10-10 19:36:59] 2025-10-11 01:36:15,372 | INFO     | mean y: 2380590.201923077
[2025-10-10 19:36:59] 2025-10-11 01:36:15,372 | INFO     | -- intersect: 54515023347.53024
[2025-10-10 19:36:59] 2025-10-11 01:36:15,372 | INFO     | intersect: 54515023347.53024
[2025-10-10 19:36:59] 2025-10-11 01:36:15,372 | INFO     | chi2: 0.05218817331211989
[2025-10-10 19:36:59] 2025-10-11 01:36:15,372 | INFO     | current chi2=0.05218817331211989 (change=96.54869161398459 %)
[2025-10-10 19:36:59] 2025-10-11 01:36:15,372 | INFO     | sum of square deviations: 300842850.0
[2025-10-10 19:36:59] 2025-10-11 01:36:15,373 | INFO     | sum of deviations: -8860714881.0
[2025-10-10 19:36:59] 2025-10-11 01:36:15,373 | INFO     | mean x: 1760143506.0
[2025-10-10 19:36:59] 2025-10-11 01:36:15,373 | INFO     | mean y: 2374396.6666666665
[2025-10-10 19:36:59] 2025-10-11 01:36:15,373 | INFO     | -- intersect: 51843825028.81468
[2025-10-10 19:36:59] 2025-10-11 01:36:15,373 | INFO     | intersect: 51843825028.81468
[2025-10-10 19:36:59] 2025-10-11 01:36:15,373 | INFO     | chi2: 0.05122640219060156
[2025-10-10 19:36:59] 2025-10-11 01:36:15,373 | INFO     | current chi2=0.05122640219060156 (change=1.8428909472770796 %)
[2025-10-10 19:36:59] 2025-10-11 01:36:15,373 | INFO     | left removable region: 20
[2025-10-10 19:36:59] 2025-10-11 01:36:15,373 | INFO     | sum of square deviations: 177275882.0
[2025-10-10 19:36:59] 2025-10-11 01:36:15,373 | INFO     | sum of deviations: -3866448399.9999995
[2025-10-10 19:36:59] 2025-10-11 01:36:15,373 | INFO     | mean x: 1760143628.0
[2025-10-10 19:36:59] 2025-10-11 01:36:15,374 | INFO     | mean y: 2359462.325301205
[2025-10-10 19:36:59] 2025-10-11 01:36:15,374 | INFO     | -- intersect: 38391701754.53172
[2025-10-10 19:36:59] 2025-10-11 01:36:15,374 | INFO     | intersect: 38391701754.53172
[2025-10-10 19:36:59] 2025-10-11 01:36:15,374 | INFO     | chi2: 0.03791431893210397
[2025-10-10 19:36:59] 2025-10-11 01:36:15,374 | INFO     | -- intersect: 38391701754.53172
[2025-10-10 19:36:59] 2025-10-11 01:36:15,374 | INFO     | current memory leak: -21.81 B/s (using 83 data points, chi2=0.04)
[2025-10-10 19:36:59] 2025-10-11 01:36:15,374 | INFO     | could have reported an average CPU frequency of 3997 MHz (7 samples)
[2025-10-10 19:36:59] 2025-10-11 01:36:15,374 | INFO     | ..............................
[2025-10-10 19:36:59] 2025-10-11 01:36:15,374 | INFO     | . Timing measurements:
[2025-10-10 19:36:59] 2025-10-11 01:36:15,374 | INFO     | . get job = 0 s
[2025-10-10 19:36:59] 2025-10-11 01:36:15,374 | INFO     | . initial setup = 3 s
[2025-10-10 19:36:59] 2025-10-11 01:36:15,374 | INFO     | . payload setup = 6 s
[2025-10-10 19:36:59] 2025-10-11 01:36:15,374 | INFO     | . stage-in = 0 s
[2025-10-10 19:36:59] 2025-10-11 01:36:15,374 | INFO     | . payload execution = 6647 s
[2025-10-10 19:36:59] 2025-10-11 01:36:15,374 | INFO     | . stage-out = 0 s
[2025-10-10 19:36:59] 2025-10-11 01:36:15,374 | INFO     | . log creation = 0 s
[2025-10-10 19:36:59] 2025-10-11 01:36:15,374 | INFO     | ..............................
[2025-10-10 19:36:59] 2025-10-11 01:36:15,795 | INFO     | 
[2025-10-10 19:36:59] 2025-10-11 01:36:15,795 | INFO     | job summary report
[2025-10-10 19:36:59] 2025-10-11 01:36:15,795 | INFO     | --------------------------------------------------
[2025-10-10 19:36:59] 2025-10-11 01:36:15,795 | INFO     | PanDA job id: 6837558537
[2025-10-10 19:36:59] 2025-10-11 01:36:15,795 | INFO     | task id: 46676269
[2025-10-10 19:36:59] 2025-10-11 01:36:15,795 | INFO     | errors: (none)
[2025-10-10 19:36:59] 2025-10-11 01:36:15,795 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 19:36:59] 2025-10-11 01:36:15,795 | INFO     | pilot state: finished 
[2025-10-10 19:36:59] 2025-10-11 01:36:15,795 | INFO     | transexitcode: 0
[2025-10-10 19:36:59] 2025-10-11 01:36:15,795 | INFO     | exeerrorcode: 0
[2025-10-10 19:36:59] 2025-10-11 01:36:15,796 | INFO     | exeerrordiag: 
[2025-10-10 19:36:59] 2025-10-11 01:36:15,796 | INFO     | exitcode: 0
[2025-10-10 19:36:59] 2025-10-11 01:36:15,796 | INFO     | exitmsg: OK
[2025-10-10 19:36:59] 2025-10-11 01:36:15,796 | INFO     | cpuconsumptiontime: 25472 s
[2025-10-10 19:36:59] 2025-10-11 01:36:15,796 | INFO     | nevents: 400
[2025-10-10 19:36:59] 2025-10-11 01:36:15,796 | INFO     | neventsw: 0
[2025-10-10 19:36:59] 2025-10-11 01:36:15,796 | INFO     | pid: 825220
[2025-10-10 19:36:59] 2025-10-11 01:36:15,796 | INFO     | pgrp: 825220
[2025-10-10 19:36:59] 2025-10-11 01:36:15,796 | INFO     | corecount: 4
[2025-10-10 19:36:59] 2025-10-11 01:36:15,796 | INFO     | event service: False
[2025-10-10 19:36:59] 2025-10-11 01:36:15,796 | INFO     | sizes: {0: 2348743, 1: 2348885, 5: 2349147, 11: 2349203, 6657: 2376318, 6658: 2385318, 6661: 2385502, 6678: 2385696}
[2025-10-10 19:36:59] 2025-10-11 01:36:15,796 | INFO     | --------------------------------------------------
[2025-10-10 19:36:59] 2025-10-11 01:36:15,796 | INFO     | 
[2025-10-10 19:36:59] 2025-10-11 01:36:15,796 | INFO     | executing command: ls -lF /var/lib/boinc3/slots/0
[2025-10-10 19:36:59] 2025-10-11 01:36:15,814 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 19:36:59] 2025-10-11 01:36:15,814 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 19:36:59] 2025-10-11 01:36:15,814 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 19:36:59] 2025-10-11 01:36:15,814 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 19:36:59] 2025-10-11 01:36:15,814 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 19:36:59] 2025-10-11 01:36:15,814 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 19:36:59] 2025-10-11 01:36:15,814 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 19:36:59] 2025-10-11 01:36:15,815 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 19:36:59] 2025-10-11 01:36:15,815 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 19:36:59] 2025-10-11 01:36:15,815 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 19:36:59] 2025-10-11 01:36:15,815 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 19:36:59] 2025-10-11 01:36:15,815 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 19:36:59] 2025-10-11 01:36:15,815 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 19:36:59] 2025-10-11 01:36:15,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 19:36:59] 2025-10-11 01:36:15,815 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 19:36:59] 2025-10-11 01:36:15,815 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 19:36:59] 2025-10-11 01:36:15,815 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 19:36:59] 2025-10-11 01:36:15,815 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 19:36:59] 2025-10-11 01:36:15,815 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 19:36:59] 2025-10-11 01:36:15,815 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 19:36:59] 2025-10-11 01:36:15,815 | INFO     | job 6837558537 has completed (purged errors)
[2025-10-10 19:36:59] 2025-10-11 01:36:15,815 | INFO     | overall cleanup function is called
[2025-10-10 19:36:59] 2025-10-11 01:36:16,818 | INFO     | --- collectZombieJob: --- 10, [825220]
[2025-10-10 19:36:59] 2025-10-11 01:36:16,819 | INFO     | zombie collector waiting for pid 825220
[2025-10-10 19:36:59] 2025-10-11 01:36:16,819 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 19:36:59] 2025-10-11 01:36:16,819 | INFO     | collected zombie processes
[2025-10-10 19:36:59] 2025-10-11 01:36:16,819 | INFO     | will attempt to kill all subprocesses of pid=825220
[2025-10-10 19:36:59] 2025-10-11 01:36:16,918 | INFO     | process IDs to be killed: [825220] (in reverse order)
[2025-10-10 19:36:59] 2025-10-11 01:36:17,068 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 19:36:59] 2025-10-11 01:36:17,068 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 19:36:59] 2025-10-11 01:36:17,071 | INFO     | did not find any defunct processes belonging to 825220
[2025-10-10 19:36:59] 2025-10-11 01:36:17,074 | INFO     | did not find any defunct processes belonging to 825220
[2025-10-10 19:36:59] 2025-10-11 01:36:17,074 | INFO     | ready for new job
[2025-10-10 19:36:59] 2025-10-11 01:36:17,074 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 19:36:59] 2025-10-11 01:36:17,075 | INFO     | ***************************************
[2025-10-10 19:36:59] 2025-10-11 01:36:17,075 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 19:36:59] 2025-10-11 01:36:17,075 | INFO     | ***************************************
[2025-10-10 19:36:59] 2025-10-11 01:36:17,075 | INFO     | 
[2025-10-10 19:36:59] 2025-10-11 01:36:17,076 | INFO     | architecture information:
[2025-10-10 19:36:59] 2025-10-11 01:36:17,079 | INFO     | executing command: cat /etc/os-release
[2025-10-10 19:36:59] 2025-10-11 01:36:17,112 | INFO     | cat /etc/os-release:
[2025-10-10 19:36:59] NAME="CentOS Linux"
[2025-10-10 19:36:59] VERSION="7 (Core)"
[2025-10-10 19:36:59] ID="centos"
[2025-10-10 19:36:59] ID_LIKE="rhel fedora"
[2025-10-10 19:36:59] VERSION_ID="7"
[2025-10-10 19:36:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 19:36:59] ANSI_COLOR="0;31"
[2025-10-10 19:36:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 19:36:59] HOME_URL="https://www.centos.org/"
[2025-10-10 19:36:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 19:36:59] 
[2025-10-10 19:36:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 19:36:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 19:36:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 19:36:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 19:36:59] 
[2025-10-10 19:36:59] 2025-10-11 01:36:17,112 | INFO     | ***************************************
[2025-10-10 19:36:59] 2025-10-11 01:36:17,615 | INFO     | executing command: df -mP /var/lib/boinc3/slots/0
[2025-10-10 19:36:59] 2025-10-11 01:36:17,663 | INFO     | sufficient remaining disk space (253243686912 B)
[2025-10-10 19:36:59] 2025-10-11 01:36:17,663 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 19:36:59] 2025-10-11 01:36:17,663 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 19:36:59] 2025-10-11 01:36:17,664 | INFO     | update_server=False
[2025-10-10 19:36:59] 2025-10-11 01:36:17,664 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 19:36:59] 2025-10-11 01:36:17,689 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 19:36:59] 2025-10-11 01:36:17,689 | INFO     | aborting loop
[2025-10-10 19:36:59] 2025-10-11 01:36:18,171 | INFO     | all payload control threads have been joined
[2025-10-10 19:36:59] 2025-10-11 01:36:18,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 19:36:59] 2025-10-11 01:36:18,669 | INFO     | [job] retrieve thread has finished
[2025-10-10 19:36:59] 2025-10-11 01:36:18,676 | INFO     | all data control threads have been joined
[2025-10-10 19:36:59] 2025-10-11 01:36:18,694 | INFO     | [job] job monitor thread has finished
[2025-10-10 19:36:59] 2025-10-11 01:36:18,887 | INFO     | [payload] failed_post thread has finished
[2025-10-10 19:36:59] 2025-10-11 01:36:19,004 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 19:36:59] 2025-10-11 01:36:19,095 | INFO     | all job control threads have been joined
[2025-10-10 19:36:59] 2025-10-11 01:36:19,176 | INFO     | [payload] control thread has finished
[2025-10-10 19:36:59] 2025-10-11 01:36:19,681 | INFO     | [data] control thread has finished
[2025-10-10 19:36:59] 2025-10-11 01:36:19,690 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 19:36:59] 2025-10-11 01:36:19,712 | INFO     | [job] validate thread has finished
[2025-10-10 19:36:59] 2025-10-11 01:36:19,764 | INFO     | [payload] validate_post thread has finished
[2025-10-10 19:36:59] 2025-10-11 01:36:19,920 | INFO     | [data] copytool_in thread has finished
[2025-10-10 19:36:59] 2025-10-11 01:36:20,008 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 19:36:59] 2025-10-11 01:36:20,100 | INFO     | [job] control thread has finished
[2025-10-10 19:36:59] 2025-10-11 01:36:20,139 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 19:36:59] 2025-10-11 01:36:20,437 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 19:36:59] 2025-10-11 01:36:21,009 | INFO     | [data] copytool_out thread has finished
[2025-10-10 19:36:59] 2025-10-11 01:36:21,442 | INFO     | [job] queue monitor thread has finished
[2025-10-10 19:36:59] 2025-10-11 01:36:22,254 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 19:36:59] 2025-10-11 01:36:28,266 | INFO     | job.realtimelogging is not enabled
[2025-10-10 19:36:59] 2025-10-11 01:36:29,271 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 19:36:59] 2025-10-11 01:36:47,812 | INFO     | PID=818267 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 19:36:59] 2025-10-11 01:36:47,812 | INFO     | .. there are 2 such processes running
[2025-10-10 19:36:59] 2025-10-11 01:36:47,813 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 19:36:59] 2025-10-11 01:36:47,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 19:36:59] 2025-10-11 01:36:47,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 19:36:59] 2025-10-11 01:36:52,440 | INFO     | [monitor] cgroup control has ended
[2025-10-10 19:36:59] 2025-10-11 01:36:53,970 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135779985475392)>', '<ExcThread(monitor, started 135779217045248)>']
[2025-10-10 19:36:59] 2025-10-11 01:36:54,848 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 19:36:59] 2025-10-11 01:36:54,848 | INFO     | [monitor] control thread has ended
[2025-10-10 19:36:59] 2025-10-11 01:36:58,995 | INFO     | all workflow threads have been joined
[2025-10-10 19:36:59] 2025-10-11 01:36:58,995 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 19:36:59] 2025-10-11 01:36:58,995 | INFO     | traces error code: 0
[2025-10-10 19:36:59] 2025-10-11 01:36:58,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 19:36:59] 2025-10-11 01:36:59,077 [wrapper] ==== pilot stdout END ====
[2025-10-10 19:36:59] 2025-10-11 01:36:59,080 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 19:36:59] 2025-10-11 01:36:59,086 [wrapper] pilotpid: 818267
[2025-10-10 19:36:59] 2025-10-11 01:36:59,094 [wrapper] Pilot exit status: 0
[2025-10-10 19:36:59] 2025-10-11 01:36:59,103 [wrapper] pandaids: 6837558537
[2025-10-10 19:36:59] 2025-10-11 01:36:59,145 [wrapper] cleanup supervisor_pilot  938058 818268
[2025-10-10 19:36:59] 2025-10-11 01:36:59,148 [wrapper] Test setup, not cleaning
[2025-10-10 19:36:59] 2025-10-11 01:36:59,157 [wrapper] apfmon messages muted
[2025-10-10 19:36:59] 2025-10-11 01:36:59,164 [wrapper] ==== wrapper stdout END ====
[2025-10-10 19:36:59] 2025-10-11 01:36:59,177 [wrapper] ==== wrapper stderr END ====
[2025-10-10 19:36:59]  *** Error codes and diagnostics ***
[2025-10-10 19:36:59]     "exeErrorCode": 0,
[2025-10-10 19:36:59]     "exeErrorDiag": "",
[2025-10-10 19:36:59]     "pilotErrorCode": 0,
[2025-10-10 19:36:59]     "pilotErrorDiag": "",
[2025-10-10 19:36:59]  *** Listing of results directory ***
[2025-10-10 19:36:59] total 414076
[2025-10-10 19:36:59] -rw-r--r-- 1 boinc boinc      5112 Oct 10 04:29 queuedata.json
[2025-10-10 19:36:59] -rw-r--r-- 1 boinc boinc    557409 Oct 10 04:29 pilot3.tar.gz
[2025-10-10 19:36:59] -rwx------ 1 boinc boinc     36292 Oct 10 04:30 runpilot2-wrapper.sh
[2025-10-10 19:36:59] -rw-rw-r-- 1 boinc boinc       100 Oct 10 17:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 19:36:59] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 17:44 run_atlas
[2025-10-10 19:36:59] -rw-rw-r-- 1 boinc boinc       105 Oct 10 17:44 job.xml
[2025-10-10 19:36:59] -rw-r--r-- 2 boinc boinc 219182227 Oct 10 17:44 EVNT.46676267._001497.pool.root.1
[2025-10-10 19:36:59] -rw-rw-r-- 1 boinc boinc      9738 Oct 10 17:44 init_data.xml
[2025-10-10 19:36:59] -rw-r--r-- 2 boinc boinc     15120 Oct 10 17:44 start_atlas.sh
[2025-10-10 19:36:59] drwxrwx--x 2 boinc boinc      4096 Oct 10 17:44 shared
[2025-10-10 19:36:59] -rw-r--r-- 2 boinc boinc    569680 Oct 10 17:44 input.tar.gz
[2025-10-10 19:36:59] -rw-rw-r-- 1 boinc boinc         0 Oct 10 17:44 boinc_lockfile
[2025-10-10 19:36:59] -rw-rw-r-- 1 boinc boinc      2549 Oct 10 17:44 pandaJob.out
[2025-10-10 19:36:59] -rw------- 1 boinc boinc    975525 Oct 10 17:44 agis_schedconf.cvmfs.json
[2025-10-10 19:36:59] -rw------- 1 boinc boinc   1560580 Oct 10 17:44 agis_ddmendpoints.agis.ALL.json
[2025-10-10 19:36:59] drwx------ 5 boinc boinc      4096 Oct 10 17:44 pilot3
[2025-10-10 19:36:59] -rw------- 1 boinc boinc 198339745 Oct 10 19:35 HITS.46676269._036859.pool.root.1
[2025-10-10 19:36:59] -rw-rw-r-- 1 boinc boinc       529 Oct 10 19:35 boinc_task_state.xml
[2025-10-10 19:36:59] -rw------- 1 boinc boinc      1044 Oct 10 19:35 memory_monitor_summary.json
[2025-10-10 19:36:59] -rw------- 1 boinc boinc    310825 Oct 10 19:35 log.46676269._036859.job.log.tgz.1
[2025-10-10 19:36:59] -rw------- 1 boinc boinc      7758 Oct 10 19:36 heartbeat.json
[2025-10-10 19:36:59] -rw-rw-r-- 1 boinc boinc        27 Oct 10 19:36 wrapper_checkpoint.txt
[2025-10-10 19:36:59] -rw-rw-r-- 1 boinc boinc      8192 Oct 10 19:36 boinc_mmap_file
[2025-10-10 19:36:59] -rw------- 1 boinc boinc        95 Oct 10 19:36 pilot_heartbeat.json
[2025-10-10 19:36:59] -rw------- 1 boinc boinc      4896 Oct 10 19:36 pilotlog.txt
[2025-10-10 19:36:59] -rw------- 1 boinc boinc    982643 Oct 10 19:36 log.46676269._036859.job.log.1
[2025-10-10 19:36:59] -rw------- 1 boinc boinc       357 Oct 10 19:36 output.list
[2025-10-10 19:36:59] -rw-rw-r-- 1 boinc boinc       620 Oct 10 19:36 runtime_log
[2025-10-10 19:36:59] -rw------- 1 boinc boinc   1310720 Oct 10 19:36 result.tar.gz
[2025-10-10 19:36:59] -rw-rw-r-- 1 boinc boinc      8699 Oct 10 19:36 runtime_log.err
[2025-10-10 19:36:59] -rw------- 1 boinc boinc       656 Oct 10 19:36 bK8KDmEZPR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmV2cNDmHOwgkm.diag
[2025-10-10 19:36:59] -rw-rw-r-- 1 boinc boinc     21271 Oct 10 19:36 stderr.txt
[2025-10-10 19:36:59] HITS file was successfully produced:
[2025-10-10 19:36:59] -rw------- 1 boinc boinc 198339745 Oct 10 19:35 shared/HITS.pool.root.1
[2025-10-10 19:36:59]  *** Contents of shared directory: ***
[2025-10-10 19:36:59] total 409604
[2025-10-10 19:36:59] -rw-r--r-- 2 boinc boinc 219182227 Oct 10 17:44 ATLAS.root_0
[2025-10-10 19:36:59] -rw-r--r-- 2 boinc boinc     15120 Oct 10 17:44 start_atlas.sh
[2025-10-10 19:36:59] -rw-r--r-- 2 boinc boinc    569680 Oct 10 17:44 input.tar.gz
[2025-10-10 19:36:59] -rw------- 1 boinc boinc 198339745 Oct 10 19:35 HITS.pool.root.1
[2025-10-10 19:36:59] -rw------- 1 boinc boinc   1310720 Oct 10 19:36 result.tar.gz
19:37:00 (814319): run_atlas exited; CPU time 25516.549472
19:37:00 (814319): called boinc_finish(0)

</stderr_txt>
]]>

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