Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:06:44 (2218842): wrapper (7.7.26015): starting
11:06:44 (2218842): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 11:06:44] Arguments: --nthreads 8
[2025-10-10 11:06:44] Threads: 8
[2025-10-10 11:06:44] Checking for CVMFS
[2025-10-10 11:06:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 11:06:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 11:06:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 11:06:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 11:06:45] 2.11.3.0 2154 28903 196952 151556 3 284 44778925 45568000 16033 130560 0 179454443 99.863 69484427 25463 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-10 11:06:45] CVMFS is ok
[2025-10-10 11:06:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 11:06:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 11:06:45] Further information can be found at the LHC@home message board.
[2025-10-10 11:06:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 11:06:45] Checking for apptainer binary...
[2025-10-10 11:06:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 11:06:45] Running /usr/bin/apptainer --version
[2025-10-10 11:06:45] apptainer version 1.4.1-1.el9
[2025-10-10 11:06:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 11:06:46] wns0007.triumf.lcg
[2025-10-10 11:06:46] apptainer works
[2025-10-10 11:06:46] Set ATHENA_PROC_NUMBER=8
[2025-10-10 11:06:46] Set ATHENA_CORE_NUMBER=8
[2025-10-10 11:06:47] Starting ATLAS job with PandaID=6837667776
[2025-10-10 11:06:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 11:13:42]  *** The last 200 lines of the pilot log: ***
[2025-10-10 11:13:42] 2025-10-10 18:13:08,430 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 11:13:42] 2025-10-10 18:13:08,430 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 11:13:42] 2025-10-10 18:13:08,431 | WARNING  | wrong length of table data, x=[1760119769.0, 1760119830.0], y=[1928.0, 471494.0] (must be same and length>=4)
[2025-10-10 11:13:42] 2025-10-10 18:13:08,431 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-10 11:13:42] 2025-10-10 18:13:08,431 | INFO     | ..............................
[2025-10-10 11:13:42] 2025-10-10 18:13:08,431 | INFO     | . Timing measurements:
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . get job = 0 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . initial setup = 6 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . payload setup = 33 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . stage-in = 0 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . payload execution = 93 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . stage-out = 1 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . log creation = 0 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | ..............................
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837667776/pilotlog.txt
[2025-10-10 11:13:42] 2025-10-10 18:13:08,485 | INFO     | time since job start (335s) is within the limit (172800.0s)
[2025-10-10 11:13:42] 2025-10-10 18:13:08,510 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-10 11:13:42] - Log from pilotlog.txt -
[2025-10-10 11:13:42] 2025-10-10 18:13:08,419 | INFO     | extracted standard info from prmon json
[2025-10-10 11:13:42] 2025-10-10 18:13:08,419 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 11:13:42] 2025-10-10 18:13:08,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 11:13:42] 2025-10-10 18:13:08,430 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 11:13:42] 2025-10-10 18:13:08,430 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 11:13:42] 2025-10-10 18:13:08,431 | WARNING  | wrong length of table data, x=[1760119769.0, 1760119830.0], y=[1928.0, 471494.0] (must be same and length>=4)
[2025-10-10 11:13:42] 2025-10-10 18:13:08,431 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-10 11:13:42] 2025-10-10 18:13:08,431 | INFO     | ..............................
[2025-10-10 11:13:42] 2025-10-10 18:13:08,431 | INFO     | . Timing measurements:
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . get job = 0 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . initial setup = 6 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . payload setup = 33 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . stage-in = 0 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . payload execution = 93 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . stage-out = 1 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . log creation = 0 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | ..............................
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837667776/pilotlog.txt
[2025-10-10 11:13:42] 2025-10-10 18:13:08,485 | INFO     | time since job start (335s) is within the limit (172800.0s)
[2025-10-10 11:13:42] 2025-10-10 18:13:08,510 | WARNING  | 
[2025-10-10 11:13:42] [begin log extracts]
[2025-10-10 11:13:42] - Log from pilotlog.txt -
[2025-10-10 11:13:42] 2025-10-10 18:13:08,419 | INFO     | extracted standard info from prmon json
[2025-10-10 11:13:42] 2025-10-10 18:13:08,419 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 11:13:42] 2025-10-10 18:13:08,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 11:13:42] 2025-10-10 18:13:08,430 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 11:13:42] 2025-10-10 18:13:08,430 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 11:13:42] 2025-10-10 18:13:08,431 | WARNING  | wrong length of table data, x=[1760119769.0, 1760119830.0], y=[1928.0, 471494.0] (must be same and length>=4)
[2025-10-10 11:13:42] 2025-10-10 18:13:08,431 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-10 11:13:42] 2025-10-10 18:13:08,431 | INFO     | ..............................
[2025-10-10 11:13:42] 2025-10-10 18:13:08,431 | INFO     | . Timing measurements:
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . get job = 0 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . initial setup = 6 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . payload setup = 33 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . stage-in = 0 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . payload execution = 93 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . stage-out = 1 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | . log creation = 0 s
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | ..............................
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 11:13:42] 2025-10-10 18:13:08,432 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837667776/pilotlog.txt
[2025-10-10 11:13:42] 2025-10-10 18:13:08,485 | INFO     | time since job start (335s) is within the limit (172800.0s)
[2025-10-10 11:13:42] [end log extracts]
[2025-10-10 11:13:42] 2025-10-10 18:13:08,511 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-10 11:13:42] 2025-10-10 18:13:08,515 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-10 11:13:42] 2025-10-10 18:13:09,009 | INFO     | 
[2025-10-10 11:13:42] 2025-10-10 18:13:09,010 | INFO     | job summary report
[2025-10-10 11:13:42] 2025-10-10 18:13:09,010 | INFO     | --------------------------------------------------
[2025-10-10 11:13:42] 2025-10-10 18:13:09,010 | INFO     | PanDA job id: 6837667776
[2025-10-10 11:13:42] 2025-10-10 18:13:09,021 | INFO     | task id: 46676269
[2025-10-10 11:13:42] 2025-10-10 18:13:09,021 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-10 11:10:27,781 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-10 11:13:42] 2025-10-10 18:13:09,021 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 11:13:42] 2025-10-10 18:13:09,021 | INFO     | pilot state: failed 
[2025-10-10 11:13:42] 2025-10-10 18:13:09,026 | INFO     | transexitcode: 65
[2025-10-10 11:13:42] 2025-10-10 18:13:09,027 | INFO     | exeerrorcode: 65
[2025-10-10 11:13:42] 2025-10-10 18:13:09,027 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 11:13:42] 2025-10-10 18:13:09,027 | INFO     | exitcode: 65
[2025-10-10 11:13:42] 2025-10-10 18:13:09,027 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 11:13:42] 2025-10-10 18:13:09,027 | INFO     | cpuconsumptiontime: 19 s
[2025-10-10 11:13:42] 2025-10-10 18:13:09,027 | INFO     | nevents: 0
[2025-10-10 11:13:42] 2025-10-10 18:13:09,027 | INFO     | neventsw: 0
[2025-10-10 11:13:42] 2025-10-10 18:13:09,027 | INFO     | pid: 2229504
[2025-10-10 11:13:42] 2025-10-10 18:13:09,027 | INFO     | pgrp: 2229504
[2025-10-10 11:13:42] 2025-10-10 18:13:09,027 | INFO     | corecount: 8
[2025-10-10 11:13:42] 2025-10-10 18:13:09,027 | INFO     | event service: False
[2025-10-10 11:13:42] 2025-10-10 18:13:09,027 | INFO     | sizes: {0: 2348029, 1: 2348711, 2: 2348910, 13: 2348910, 24: 2349256, 34: 2349256, 131: 2372638, 134: 2376930, 137: 2376958, 277: 2377124}
[2025-10-10 11:13:42] 2025-10-10 18:13:09,027 | INFO     | --------------------------------------------------
[2025-10-10 11:13:42] 2025-10-10 18:13:09,027 | INFO     | 
[2025-10-10 11:13:42] 2025-10-10 18:13:09,028 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-10 11:13:42] 2025-10-10 18:13:09,093 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 11:13:42] 2025-10-10 18:13:09,094 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 11:13:42] 2025-10-10 18:13:09,094 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 11:13:42] 2025-10-10 18:13:09,094 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 11:13:42] 2025-10-10 18:13:09,094 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 11:13:42] 2025-10-10 18:13:09,094 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 11:13:42] 2025-10-10 18:13:09,094 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 11:13:42] 2025-10-10 18:13:09,094 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 11:13:42] 2025-10-10 18:13:09,094 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 11:13:42] 2025-10-10 18:13:09,094 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 11:13:42] 2025-10-10 18:13:09,094 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 11:13:42] 2025-10-10 18:13:09,095 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 11:13:42] 2025-10-10 18:13:09,095 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 11:13:42] 2025-10-10 18:13:09,095 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 11:13:42] 2025-10-10 18:13:09,095 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 11:13:42] 2025-10-10 18:13:09,095 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 11:13:42] 2025-10-10 18:13:09,095 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 11:13:42] 2025-10-10 18:13:09,095 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 11:13:42] 2025-10-10 18:13:09,095 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 11:13:42] 2025-10-10 18:13:09,095 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 11:13:42] 2025-10-10 18:13:09,095 | INFO     | job 6837667776 has completed (purged errors)
[2025-10-10 11:13:42] 2025-10-10 18:13:09,095 | INFO     | overall cleanup function is called
[2025-10-10 11:13:42] 2025-10-10 18:13:10,102 | INFO     | --- collectZombieJob: --- 10, [2229504]
[2025-10-10 11:13:42] 2025-10-10 18:13:10,102 | INFO     | zombie collector waiting for pid 2229504
[2025-10-10 11:13:42] 2025-10-10 18:13:10,102 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 11:13:42] 2025-10-10 18:13:10,102 | INFO     | collected zombie processes
[2025-10-10 11:13:42] 2025-10-10 18:13:10,102 | INFO     | will attempt to kill all subprocesses of pid=2229504
[2025-10-10 11:13:42] 2025-10-10 18:13:10,513 | INFO     | process IDs to be killed: [2229504] (in reverse order)
[2025-10-10 11:13:42] 2025-10-10 18:13:10,648 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 11:13:42] 2025-10-10 18:13:10,648 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 11:13:42] 2025-10-10 18:13:10,658 | INFO     | did not find any defunct processes belonging to 2229504
[2025-10-10 11:13:42] 2025-10-10 18:13:10,674 | INFO     | did not find any defunct processes belonging to 2229504
[2025-10-10 11:13:42] 2025-10-10 18:13:10,675 | INFO     | ready for new job
[2025-10-10 11:13:42] 2025-10-10 18:13:10,675 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 11:13:42] 2025-10-10 18:13:10,676 | INFO     | ***************************************
[2025-10-10 11:13:42] 2025-10-10 18:13:10,676 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 11:13:42] 2025-10-10 18:13:10,676 | INFO     | ***************************************
[2025-10-10 11:13:42] 2025-10-10 18:13:10,676 | INFO     | 
[2025-10-10 11:13:42] 2025-10-10 18:13:10,678 | INFO     | architecture information:
[2025-10-10 11:13:42] 2025-10-10 18:13:10,681 | INFO     | executing command: cat /etc/os-release
[2025-10-10 11:13:42] 2025-10-10 18:13:10,715 | INFO     | cat /etc/os-release:
[2025-10-10 11:13:42] NAME="CentOS Linux"
[2025-10-10 11:13:42] VERSION="7 (Core)"
[2025-10-10 11:13:42] ID="centos"
[2025-10-10 11:13:42] ID_LIKE="rhel fedora"
[2025-10-10 11:13:42] VERSION_ID="7"
[2025-10-10 11:13:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 11:13:42] ANSI_COLOR="0;31"
[2025-10-10 11:13:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 11:13:42] HOME_URL="https://www.centos.org/"
[2025-10-10 11:13:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 11:13:42] 
[2025-10-10 11:13:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 11:13:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 11:13:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 11:13:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 11:13:42] 
[2025-10-10 11:13:42] 2025-10-10 18:13:10,715 | INFO     | ***************************************
[2025-10-10 11:13:42] 2025-10-10 18:13:11,219 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-10 11:13:42] 2025-10-10 18:13:11,268 | INFO     | sufficient remaining disk space (1001958408192 B)
[2025-10-10 11:13:42] 2025-10-10 18:13:11,269 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 11:13:42] 2025-10-10 18:13:11,270 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 11:13:42] 2025-10-10 18:13:11,270 | INFO     | update_server=False
[2025-10-10 11:13:42] 2025-10-10 18:13:11,270 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 11:13:42] 2025-10-10 18:13:11,271 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 11:13:42] 2025-10-10 18:13:11,271 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 11:13:42] 2025-10-10 18:13:11,271 | INFO     | aborting loop
[2025-10-10 11:13:42] 2025-10-10 18:13:11,341 | INFO     | all payload control threads have been joined
[2025-10-10 11:13:42] 2025-10-10 18:13:11,509 | INFO     | all job control threads have been joined
[2025-10-10 11:13:42] 2025-10-10 18:13:11,871 | INFO     | all data control threads have been joined
[2025-10-10 11:13:42] 2025-10-10 18:13:12,028 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 11:13:42] 2025-10-10 18:13:12,277 | INFO     | [job] job monitor thread has finished
[2025-10-10 11:13:42] 2025-10-10 18:13:12,280 | INFO     | [job] retrieve thread has finished
[2025-10-10 11:13:42] 2025-10-10 18:13:12,347 | INFO     | [payload] control thread has finished
[2025-10-10 11:13:42] 2025-10-10 18:13:12,450 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 11:13:42] 2025-10-10 18:13:12,515 | INFO     | [job] control thread has finished
[2025-10-10 11:13:42] 2025-10-10 18:13:12,592 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 11:13:42] 2025-10-10 18:13:12,880 | INFO     | [data] control thread has finished
[2025-10-10 11:13:42] 2025-10-10 18:13:12,880 | INFO     | [job] validate thread has finished
[2025-10-10 11:13:42] 2025-10-10 18:13:12,961 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 11:13:42] 2025-10-10 18:13:12,985 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 11:13:42] 2025-10-10 18:13:12,998 | INFO     | [data] copytool_in thread has finished
[2025-10-10 11:13:42] 2025-10-10 18:13:13,135 | INFO     | [payload] failed_post thread has finished
[2025-10-10 11:13:42] 2025-10-10 18:13:13,408 | INFO     | [payload] validate_post thread has finished
[2025-10-10 11:13:42] 2025-10-10 18:13:14,023 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 11:13:42] 2025-10-10 18:13:14,035 | INFO     | [data] copytool_out thread has finished
[2025-10-10 11:13:42] 2025-10-10 18:13:15,041 | INFO     | [job] queue monitor thread has finished
[2025-10-10 11:13:42] 2025-10-10 18:13:15,286 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 11:13:42] 2025-10-10 18:13:32,945 | INFO     | [monitor] cgroup control has ended
[2025-10-10 11:13:42] 2025-10-10 18:13:33,728 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140557671122752)>', '<ExcThread(monitor, started 140557133264640)>']
[2025-10-10 11:13:42] 2025-10-10 18:13:38,755 | INFO     | all workflow threads have been joined
[2025-10-10 11:13:42] 2025-10-10 18:13:38,755 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 11:13:42] 2025-10-10 18:13:38,755 | INFO     | traces error code: 0
[2025-10-10 11:13:42] 2025-10-10 18:13:38,755 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 11:13:42] 2025-10-10 18:13:41,999 | INFO     | PID=2222607 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 11:13:42] 2025-10-10 18:13:41,999 | INFO     | .. there are 33 such processes running
[2025-10-10 11:13:42] 2025-10-10 18:13:42,000 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 11:13:42] 2025-10-10 18:13:42,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 11:13:42] 2025-10-10 18:13:42,000 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 11:13:42] 2025-10-10 18:13:42,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 11:13:42] 2025-10-10 18:13:42,000 | INFO     | [monitor] control thread has ended
[2025-10-10 11:13:42] 2025-10-10 18:13:42,136 [wrapper] ==== pilot stdout END ====
[2025-10-10 11:13:42] 2025-10-10 18:13:42,158 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 11:13:42] 2025-10-10 18:13:42,179 [wrapper] pilotpid: 2222607
[2025-10-10 11:13:42] 2025-10-10 18:13:42,198 [wrapper] Pilot exit status: 0
[2025-10-10 11:13:42] 2025-10-10 18:13:42,309 [wrapper] pandaids: 6837667776
[2025-10-10 11:13:42] 2025-10-10 18:13:42,475 [wrapper] cleanup supervisor_pilot 2222613 2222608
[2025-10-10 11:13:42] 2025-10-10 18:13:42,479 [wrapper] Test setup, not cleaning
[2025-10-10 11:13:42] 2025-10-10 18:13:42,491 [wrapper] apfmon messages muted
[2025-10-10 11:13:42] 2025-10-10 18:13:42,517 [wrapper] ==== wrapper stdout END ====
[2025-10-10 11:13:42] 2025-10-10 18:13:42,540 [wrapper] ==== wrapper stderr END ====
[2025-10-10 11:13:42]  *** Error codes and diagnostics ***
[2025-10-10 11:13:42]     "exeErrorCode": 65,
[2025-10-10 11:13:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 11:13:42]     "pilotErrorCode": 1305,
[2025-10-10 11:13:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 11:13:42]  *** Listing of results directory ***
[2025-10-10 11:13:42] total 217696
[2025-10-10 11:13:42] -rw-r--r--. 1 boinc boinc    557409 Oct 10 08:29 pilot3.tar.gz
[2025-10-10 11:13:42] -rw-r--r--. 1 boinc boinc      5112 Oct 10 08:39 queuedata.json
[2025-10-10 11:13:42] -rwx------. 1 boinc boinc     36292 Oct 10 08:40 runpilot2-wrapper.sh
[2025-10-10 11:13:42] -rw-r--r--. 1 boinc boinc       100 Oct 10 11:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 11:13:42] -rwxr-xr-x. 1 boinc boinc      7986 Oct 10 11:06 run_atlas
[2025-10-10 11:13:42] -rw-r--r--. 1 boinc boinc       105 Oct 10 11:06 job.xml
[2025-10-10 11:13:42] -rw-r--r--. 1 boinc boinc      6443 Oct 10 11:06 init_data.xml
[2025-10-10 11:13:42] -rw-r--r--. 2 boinc boinc 218778619 Oct 10 11:06 EVNT.46676267._001660.pool.root.1
[2025-10-10 11:13:42] -rw-r--r--. 2 boinc boinc     15120 Oct 10 11:06 start_atlas.sh
[2025-10-10 11:13:42] drwxrwx--x. 2 boinc boinc      4096 Oct 10 11:06 shared
[2025-10-10 11:13:42] -rw-r--r--. 2 boinc boinc    569680 Oct 10 11:06 input.tar.gz
[2025-10-10 11:13:42] -rw-r--r--. 1 boinc boinc         0 Oct 10 11:06 boinc_lockfile
[2025-10-10 11:13:42] -rw-r--r--. 1 boinc boinc      2550 Oct 10 11:06 pandaJob.out
[2025-10-10 11:13:42] -rw-------. 1 boinc boinc    975525 Oct 10 11:07 agis_schedconf.cvmfs.json
[2025-10-10 11:13:42] -rw-------. 1 boinc boinc   1560580 Oct 10 11:07 agis_ddmendpoints.agis.ALL.json
[2025-10-10 11:13:42] drwx------. 5 boinc boinc      4096 Oct 10 11:07 pilot3
[2025-10-10 11:13:42] -rw-r--r--. 1 boinc boinc       525 Oct 10 11:10 boinc_task_state.xml
[2025-10-10 11:13:42] -rw-------. 1 boinc boinc       986 Oct 10 11:10 memory_monitor_summary.json
[2025-10-10 11:13:42] -rw-------. 1 boinc boinc     22992 Oct 10 11:10 log.46676269._040948.job.log.tgz.1
[2025-10-10 11:13:42] -rw-------. 1 boinc boinc      8400 Oct 10 11:13 heartbeat.json
[2025-10-10 11:13:42] -rw-r--r--. 1 boinc boinc      8192 Oct 10 11:13 boinc_mmap_file
[2025-10-10 11:13:42] -rw-r--r--. 1 boinc boinc        23 Oct 10 11:13 wrapper_checkpoint.txt
[2025-10-10 11:13:42] -rw-------. 1 boinc boinc        95 Oct 10 11:13 pilot_heartbeat.json
[2025-10-10 11:13:42] -rw-------. 1 boinc boinc       823 Oct 10 11:13 pilotlog.txt
[2025-10-10 11:13:42] -rw-------. 1 boinc boinc    101153 Oct 10 11:13 log.46676269._040948.job.log.1
[2025-10-10 11:13:42] -rw-------. 1 boinc boinc       188 Oct 10 11:13 output.list
[2025-10-10 11:13:42] -rw-r--r--. 1 boinc boinc       620 Oct 10 11:13 runtime_log
[2025-10-10 11:13:42] -rw-------. 1 boinc boinc    143360 Oct 10 11:13 result.tar.gz
[2025-10-10 11:13:42] -rw-------. 1 boinc boinc       646 Oct 10 11:13 tB6KDmwPUR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWkdNDmfiWv5n.diag
[2025-10-10 11:13:42] -rw-r--r--. 1 boinc boinc      8526 Oct 10 11:13 runtime_log.err
[2025-10-10 11:13:42] -rw-r--r--. 1 boinc boinc     21823 Oct 10 11:13 stderr.txt
[2025-10-10 11:13:42] No HITS result produced
[2025-10-10 11:13:42]  *** Contents of shared directory: ***
[2025-10-10 11:13:42] total 214368
[2025-10-10 11:13:42] -rw-r--r--. 2 boinc boinc 218778619 Oct 10 11:06 ATLAS.root_0
[2025-10-10 11:13:42] -rw-r--r--. 2 boinc boinc     15120 Oct 10 11:06 start_atlas.sh
[2025-10-10 11:13:42] -rw-r--r--. 2 boinc boinc    569680 Oct 10 11:06 input.tar.gz
[2025-10-10 11:13:42] -rw-------. 1 boinc boinc    143360 Oct 10 11:13 result.tar.gz
11:13:44 (2218842): run_atlas exited; CPU time 31.447332
11:13:44 (2218842): called boinc_finish(0)

</stderr_txt>
]]>

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