Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:32:16 (608705): wrapper (7.7.26015): starting
09:32:16 (608705): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 09:32:16] Arguments: --nthreads 4
[2025-10-11 09:32:16] Threads: 4
[2025-10-11 09:32:16] Checking for CVMFS
[2025-10-11 09:32:16] No cvmfs_config command found, will try listing directly
[2025-10-11 09:32:16] CVMFS is ok
[2025-10-11 09:32:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 09:32:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 09:32:16] Further information can be found at the LHC@home message board.
[2025-10-11 09:32:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 09:32:16] Checking for apptainer binary...
[2025-10-11 09:32:16] which: no apptainer in ((null))
[2025-10-11 09:32:16] apptainer is not installed, using version from CVMFS
[2025-10-11 09:32:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 09:32:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-10-11 09:32:16] apptainer works
[2025-10-11 09:32:16] Set ATHENA_PROC_NUMBER=4
[2025-10-11 09:32:16] Set ATHENA_CORE_NUMBER=4
[2025-10-11 09:32:16] Starting ATLAS job with PandaID=6837558327
[2025-10-11 09:32:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 12:31:07]  *** The last 200 lines of the pilot log: ***
[2025-10-11 12:31:07] 2025-10-11 10:30:33,752 | INFO     | monitor loop #773: job 0:6837558327 is in state 'finished'
[2025-10-11 12:31:07] 2025-10-11 10:30:33,753 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 12:31:07] 2025-10-11 10:30:33,803 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 12:31:07] 2025-10-11 10:30:33,813 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2666.996921875
[2025-10-11 12:31:07] 2025-10-11 10:30:33,825 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6837558327/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 12:31:07] 2025-10-11 10:30:33,826 | INFO     | extracted standard info from prmon json
[2025-10-11 12:31:07] 2025-10-11 10:30:33,826 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 12:31:07] 2025-10-11 10:30:33,826 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 12:31:07] 2025-10-11 10:30:33,827 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 12:31:07] 2025-10-11 10:30:33,827 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 12:31:07] 2025-10-11 10:30:33,830 | INFO     | fitting pss+swap vs Time
[2025-10-11 12:31:07] 2025-10-11 10:30:33,831 | INFO     | sum of square deviations: 1661798600.0
[2025-10-11 12:31:07] 2025-10-11 10:30:33,832 | INFO     | sum of deviations: 3004046260.000003
[2025-10-11 12:31:07] 2025-10-11 10:30:33,832 | INFO     | mean x: 1760173280.0
[2025-10-11 12:31:07] 2025-10-11 10:30:33,832 | INFO     | mean y: 2347817.5657142857
[2025-10-11 12:31:07] 2025-10-11 10:30:33,832 | INFO     | -- intersect: -3179531116.942919
[2025-10-11 12:31:07] 2025-10-11 10:30:33,832 | INFO     | intersect: -3179531116.942919
[2025-10-11 12:31:07] 2025-10-11 10:30:33,833 | INFO     | chi2: 1.404758165288943
[2025-10-11 12:31:07] 2025-10-11 10:30:33,833 | INFO     | sum of square deviations: 1523386702.5
[2025-10-11 12:31:07] 2025-10-11 10:30:33,834 | INFO     | sum of deviations: 2711401413.4999986
[2025-10-11 12:31:07] 2025-10-11 10:30:33,834 | INFO     | mean x: 1760173127.5
[2025-10-11 12:31:07] 2025-10-11 10:30:33,834 | INFO     | mean y: 2347504.6529411767
[2025-10-11 12:31:07] 2025-10-11 10:30:33,834 | INFO     | -- intersect: -3130498474.68776
[2025-10-11 12:31:07] 2025-10-11 10:30:33,834 | INFO     | intersect: -3130498474.68776
[2025-10-11 12:31:07] 2025-10-11 10:30:33,835 | INFO     | chi2: 1.4039073014657728
[2025-10-11 12:31:07] 2025-10-11 10:30:33,835 | INFO     | current chi2=1.4039073014657728 (change=0.060570128310669734 %)
[2025-10-11 12:31:07] 2025-10-11 10:30:33,835 | INFO     | right removable region: 169
[2025-10-11 12:31:07] 2025-10-11 10:30:33,835 | INFO     | sum of square deviations: 1523386702.5
[2025-10-11 12:31:07] 2025-10-11 10:30:33,836 | INFO     | sum of deviations: -19074703324.5
[2025-10-11 12:31:07] 2025-10-11 10:30:33,836 | INFO     | mean x: 1760173432.5
[2025-10-11 12:31:07] 2025-10-11 10:30:33,836 | INFO     | mean y: 2371785.911764706
[2025-10-11 12:31:07] 2025-10-11 10:30:33,836 | INFO     | -- intersect: 22041940576.623543
[2025-10-11 12:31:07] 2025-10-11 10:30:33,837 | INFO     | intersect: 22041940576.623543
[2025-10-11 12:31:07] 2025-10-11 10:30:33,837 | INFO     | chi2: 0.08640919980759544
[2025-10-11 12:31:07] 2025-10-11 10:30:33,837 | INFO     | current chi2=0.08640919980759544 (change=93.84882024943973 %)
[2025-10-11 12:31:07] 2025-10-11 10:30:33,837 | INFO     | sum of square deviations: 1392881930.0
[2025-10-11 12:31:07] 2025-10-11 10:30:33,838 | INFO     | sum of deviations: -18068506708.0
[2025-10-11 12:31:07] 2025-10-11 10:30:33,838 | INFO     | mean x: 1760173585.0
[2025-10-11 12:31:07] 2025-10-11 10:30:33,838 | INFO     | mean y: 2370601.9575757575
[2025-10-11 12:31:07] 2025-10-11 10:30:33,838 | INFO     | -- intersect: 22835395815.958958
[2025-10-11 12:31:07] 2025-10-11 10:30:33,839 | INFO     | intersect: 22835395815.958958
[2025-10-11 12:31:07] 2025-10-11 10:30:33,839 | INFO     | chi2: 0.08555162575693218
[2025-10-11 12:31:07] 2025-10-11 10:30:33,839 | INFO     | current chi2=0.08555162575693218 (change=0.9924568825689827 %)
[2025-10-11 12:31:07] 2025-10-11 10:30:33,839 | INFO     | left removable region: 20
[2025-10-11 12:31:07] 2025-10-11 10:30:33,839 | INFO     | sum of square deviations: 1025693650.0
[2025-10-11 12:31:07] 2025-10-11 10:30:33,840 | INFO     | sum of deviations: -13945797003.000002
[2025-10-11 12:31:07] 2025-10-11 10:30:33,840 | INFO     | mean x: 1760173707.0
[2025-10-11 12:31:07] 2025-10-11 10:30:33,840 | INFO     | mean y: 2365989.4295302015
[2025-10-11 12:31:07] 2025-10-11 10:30:33,840 | INFO     | -- intersect: 23934487639.826805
[2025-10-11 12:31:07] 2025-10-11 10:30:33,840 | INFO     | intersect: 23934487639.826805
[2025-10-11 12:31:07] 2025-10-11 10:30:33,841 | INFO     | chi2: 0.07998836683762589
[2025-10-11 12:31:07] 2025-10-11 10:30:33,841 | INFO     | -- intersect: 23934487639.826805
[2025-10-11 12:31:07] 2025-10-11 10:30:33,841 | INFO     | current memory leak: -13.60 B/s (using 149 data points, chi2=0.08)
[2025-10-11 12:31:07] 2025-10-11 10:30:33,841 | INFO     | could have reported an average CPU frequency of 2673 MHz (9 samples)
[2025-10-11 12:31:07] 2025-10-11 10:30:33,842 | INFO     | ..............................
[2025-10-11 12:31:07] 2025-10-11 10:30:33,842 | INFO     | . Timing measurements:
[2025-10-11 12:31:07] 2025-10-11 10:30:33,842 | INFO     | . get job = 0 s
[2025-10-11 12:31:07] 2025-10-11 10:30:33,842 | INFO     | . initial setup = 1 s
[2025-10-11 12:31:07] 2025-10-11 10:30:33,842 | INFO     | . payload setup = 5 s
[2025-10-11 12:31:07] 2025-10-11 10:30:33,842 | INFO     | . stage-in = 0 s
[2025-10-11 12:31:07] 2025-10-11 10:30:33,842 | INFO     | . payload execution = 10652 s
[2025-10-11 12:31:07] 2025-10-11 10:30:33,842 | INFO     | . stage-out = 1 s
[2025-10-11 12:31:07] 2025-10-11 10:30:33,842 | INFO     | . log creation = 0 s
[2025-10-11 12:31:07] 2025-10-11 10:30:33,842 | INFO     | ..............................
[2025-10-11 12:31:07] 2025-10-11 10:30:34,183 | INFO     | 
[2025-10-11 12:31:07] 2025-10-11 10:30:34,184 | INFO     | job summary report
[2025-10-11 12:31:07] 2025-10-11 10:30:34,184 | INFO     | --------------------------------------------------
[2025-10-11 12:31:07] 2025-10-11 10:30:34,184 | INFO     | PanDA job id: 6837558327
[2025-10-11 12:31:07] 2025-10-11 10:30:34,184 | INFO     | task id: 46676269
[2025-10-11 12:31:07] 2025-10-11 10:30:34,184 | INFO     | errors: (none)
[2025-10-11 12:31:07] 2025-10-11 10:30:34,184 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 12:31:07] 2025-10-11 10:30:34,184 | INFO     | pilot state: finished 
[2025-10-11 12:31:07] 2025-10-11 10:30:34,184 | INFO     | transexitcode: 0
[2025-10-11 12:31:07] 2025-10-11 10:30:34,185 | INFO     | exeerrorcode: 0
[2025-10-11 12:31:07] 2025-10-11 10:30:34,185 | INFO     | exeerrordiag: 
[2025-10-11 12:31:07] 2025-10-11 10:30:34,185 | INFO     | exitcode: 0
[2025-10-11 12:31:07] 2025-10-11 10:30:34,185 | INFO     | exitmsg: OK
[2025-10-11 12:31:07] 2025-10-11 10:30:34,185 | INFO     | cpuconsumptiontime: 40985 s
[2025-10-11 12:31:07] 2025-10-11 10:30:34,185 | INFO     | nevents: 400
[2025-10-11 12:31:07] 2025-10-11 10:30:34,185 | INFO     | neventsw: 0
[2025-10-11 12:31:07] 2025-10-11 10:30:34,185 | INFO     | pid: 630124
[2025-10-11 12:31:07] 2025-10-11 10:30:34,185 | INFO     | pgrp: 630124
[2025-10-11 12:31:07] 2025-10-11 10:30:34,185 | INFO     | corecount: 4
[2025-10-11 12:31:07] 2025-10-11 10:30:34,185 | INFO     | event service: False
[2025-10-11 12:31:07] 2025-10-11 10:30:34,186 | INFO     | sizes: {0: 2348696, 1: 2348895, 5: 2349157, 11: 2349213, 10661: 2378075, 10662: 2378074, 10664: 2387334, 10672: 2387724}
[2025-10-11 12:31:07] 2025-10-11 10:30:34,186 | INFO     | --------------------------------------------------
[2025-10-11 12:31:07] 2025-10-11 10:30:34,186 | INFO     | 
[2025-10-11 12:31:07] 2025-10-11 10:30:34,186 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-10-11 12:31:07] 2025-10-11 10:30:34,211 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 12:31:07] 2025-10-11 10:30:34,211 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 12:31:07] 2025-10-11 10:30:34,211 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 12:31:07] 2025-10-11 10:30:34,211 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 12:31:07] 2025-10-11 10:30:34,211 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 12:31:07] 2025-10-11 10:30:34,211 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 12:31:07] 2025-10-11 10:30:34,211 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 12:31:07] 2025-10-11 10:30:34,211 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 12:31:07] 2025-10-11 10:30:34,211 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 12:31:07] 2025-10-11 10:30:34,212 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 12:31:07] 2025-10-11 10:30:34,212 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 12:31:07] 2025-10-11 10:30:34,212 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 12:31:07] 2025-10-11 10:30:34,212 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 12:31:07] 2025-10-11 10:30:34,212 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 12:31:07] 2025-10-11 10:30:34,212 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 12:31:07] 2025-10-11 10:30:34,212 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 12:31:07] 2025-10-11 10:30:34,212 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 12:31:07] 2025-10-11 10:30:34,212 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 12:31:07] 2025-10-11 10:30:34,212 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 12:31:07] 2025-10-11 10:30:34,212 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 12:31:07] 2025-10-11 10:30:34,212 | INFO     | job 6837558327 has completed (purged errors)
[2025-10-11 12:31:07] 2025-10-11 10:30:34,212 | INFO     | overall cleanup function is called
[2025-10-11 12:31:07] 2025-10-11 10:30:35,219 | INFO     | --- collectZombieJob: --- 10, [630124]
[2025-10-11 12:31:07] 2025-10-11 10:30:35,220 | INFO     | zombie collector waiting for pid 630124
[2025-10-11 12:31:07] 2025-10-11 10:30:35,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 12:31:07] 2025-10-11 10:30:35,220 | INFO     | collected zombie processes
[2025-10-11 12:31:07] 2025-10-11 10:30:35,220 | INFO     | will attempt to kill all subprocesses of pid=630124
[2025-10-11 12:31:07] 2025-10-11 10:30:35,625 | INFO     | process IDs to be killed: [630124] (in reverse order)
[2025-10-11 12:31:07] 2025-10-11 10:30:35,773 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 12:31:07] 2025-10-11 10:30:35,773 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 12:31:07] 2025-10-11 10:30:35,787 | INFO     | did not find any defunct processes belonging to 630124
[2025-10-11 12:31:07] 2025-10-11 10:30:35,800 | INFO     | did not find any defunct processes belonging to 630124
[2025-10-11 12:31:07] 2025-10-11 10:30:35,801 | INFO     | ready for new job
[2025-10-11 12:31:07] 2025-10-11 10:30:35,801 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 12:31:07] 2025-10-11 10:30:35,803 | INFO     | ***************************************
[2025-10-11 12:31:07] 2025-10-11 10:30:35,803 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 12:31:07] 2025-10-11 10:30:35,803 | INFO     | ***************************************
[2025-10-11 12:31:07] 2025-10-11 10:30:35,803 | INFO     | 
[2025-10-11 12:31:07] 2025-10-11 10:30:35,807 | INFO     | architecture information:
[2025-10-11 12:31:07] 2025-10-11 10:30:35,807 | INFO     | executing command: cat /etc/os-release
[2025-10-11 12:31:07] 2025-10-11 10:30:35,823 | INFO     | cat /etc/os-release:
[2025-10-11 12:31:07] NAME="CentOS Linux"
[2025-10-11 12:31:07] VERSION="7 (Core)"
[2025-10-11 12:31:07] ID="centos"
[2025-10-11 12:31:07] ID_LIKE="rhel fedora"
[2025-10-11 12:31:07] VERSION_ID="7"
[2025-10-11 12:31:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 12:31:07] ANSI_COLOR="0;31"
[2025-10-11 12:31:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 12:31:07] HOME_URL="https://www.centos.org/"
[2025-10-11 12:31:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 12:31:07] 
[2025-10-11 12:31:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 12:31:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 12:31:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 12:31:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 12:31:07] 
[2025-10-11 12:31:07] 2025-10-11 10:30:35,823 | INFO     | ***************************************
[2025-10-11 12:31:07] 2025-10-11 10:30:36,326 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-10-11 12:31:07] 2025-10-11 10:30:36,342 | INFO     | sufficient remaining disk space (695972397056 B)
[2025-10-11 12:31:07] 2025-10-11 10:30:36,343 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 12:31:07] 2025-10-11 10:30:36,343 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 12:31:07] 2025-10-11 10:30:36,343 | INFO     | update_server=False
[2025-10-11 12:31:07] 2025-10-11 10:30:36,343 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 12:31:07] 2025-10-11 10:30:36,343 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 12:31:07] 2025-10-11 10:30:36,344 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 12:31:07] 2025-10-11 10:30:37,215 | INFO     | all data control threads have been joined
[2025-10-11 12:31:07] 2025-10-11 10:30:37,261 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:31:07] 2025-10-11 10:30:37,262 | INFO     | aborting loop
[2025-10-11 12:31:07] 2025-10-11 10:30:37,349 | INFO     | [job] retrieve thread has finished
[2025-10-11 12:31:07] 2025-10-11 10:30:37,435 | INFO     | all payload control threads have been joined
[2025-10-11 12:31:07] 2025-10-11 10:30:37,473 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 12:31:07] 2025-10-11 10:30:37,608 | INFO     | all job control threads have been joined
[2025-10-11 12:31:07] 2025-10-11 10:30:37,787 | INFO     | [payload] failed_post thread has finished
[2025-10-11 12:31:07] 2025-10-11 10:30:37,796 | INFO     | [payload] validate_post thread has finished
[2025-10-11 12:31:07] 2025-10-11 10:30:37,840 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 12:31:07] 2025-10-11 10:30:38,221 | INFO     | [data] control thread has finished
[2025-10-11 12:31:07] 2025-10-11 10:30:38,267 | INFO     | [job] job monitor thread has finished
[2025-10-11 12:31:07] 2025-10-11 10:30:38,348 | INFO     | [data] copytool_out thread has finished
[2025-10-11 12:31:07] 2025-10-11 10:30:38,441 | INFO     | [payload] control thread has finished
[2025-10-11 12:31:07] 2025-10-11 10:30:38,614 | INFO     | [job] control thread has finished
[2025-10-11 12:31:07] 2025-10-11 10:30:38,661 | INFO     | [data] copytool_in thread has finished
[2025-10-11 12:31:07] 2025-10-11 10:30:38,662 | INFO     | [job] validate thread has finished
[2025-10-11 12:31:07] 2025-10-11 10:30:38,677 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 12:31:07] 2025-10-11 10:30:38,846 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 12:31:07] 2025-10-11 10:30:38,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:31:07] 2025-10-11 10:30:39,952 | INFO     | [job] queue monitor thread has finished
[2025-10-11 12:31:07] 2025-10-11 10:30:40,348 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 12:31:07] 2025-10-11 10:30:43,837 | INFO     | [monitor] cgroup control has ended
[2025-10-11 12:31:07] 2025-10-11 10:30:45,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22687453841216)>', '<ExcThread(monitor, started 22687147599616)>']
[2025-10-11 12:31:07] 2025-10-11 10:30:50,536 | INFO     | all workflow threads have been joined
[2025-10-11 12:31:07] 2025-10-11 10:30:50,537 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 12:31:07] 2025-10-11 10:30:50,537 | INFO     | traces error code: 0
[2025-10-11 12:31:07] 2025-10-11 10:30:50,537 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 12:31:07] 2025-10-11 10:31:06,915 | INFO     | PID=616234 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 12:31:07] 2025-10-11 10:31:06,915 | INFO     | .. there are 7 such processes running
[2025-10-11 12:31:07] 2025-10-11 10:31:06,915 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 12:31:07] 2025-10-11 10:31:06,915 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 12:31:07] 2025-10-11 10:31:06,915 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 12:31:07] 2025-10-11 10:31:06,915 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 12:31:07] 2025-10-11 10:31:06,916 | CRITICAL | thread 'MainThread' is not alive
[2025-10-11 12:31:07] 2025-10-11 10:31:06,916 | INFO     | [monitor] control thread has ended
[2025-10-11 12:31:07] 2025-10-11 10:31:07,062 [wrapper] ==== pilot stdout END ====
[2025-10-11 12:31:07] 2025-10-11 10:31:07,067 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 12:31:07] 2025-10-11 10:31:07,069 [wrapper] pilotpid: 616234
[2025-10-11 12:31:07] 2025-10-11 10:31:07,072 [wrapper] Pilot exit status: 0
[2025-10-11 12:31:07] 2025-10-11 10:31:07,085 [wrapper] pandaids: 6837558327
[2025-10-11 12:31:07] 2025-10-11 10:31:07,159 [wrapper] cleanup supervisor_pilot  893298 616236
[2025-10-11 12:31:07] 2025-10-11 10:31:07,162 [wrapper] Test setup, not cleaning
[2025-10-11 12:31:07] 2025-10-11 10:31:07,165 [wrapper] apfmon messages muted
[2025-10-11 12:31:07] 2025-10-11 10:31:07,167 [wrapper] ==== wrapper stdout END ====
[2025-10-11 12:31:07] 2025-10-11 10:31:07,170 [wrapper] ==== wrapper stderr END ====
[2025-10-11 12:31:07]  *** Error codes and diagnostics ***
[2025-10-11 12:31:07]     "exeErrorCode": 0,
[2025-10-11 12:31:07]     "exeErrorDiag": "",
[2025-10-11 12:31:07]     "pilotErrorCode": 0,
[2025-10-11 12:31:07]     "pilotErrorDiag": "",
[2025-10-11 12:31:07]  *** Listing of results directory ***
[2025-10-11 12:31:07] total 414100
[2025-10-11 12:31:07] -rw-r--r-- 1 boinc boinc    557409 Oct 10 11:49 pilot3.tar.gz
[2025-10-11 12:31:07] -rwx------ 1 boinc boinc     36292 Oct 10 12:24 runpilot2-wrapper.sh
[2025-10-11 12:31:07] -rw-r--r-- 1 boinc boinc      5112 Oct 10 12:24 queuedata.json
[2025-10-11 12:31:07] -rw-r--r-- 1 boinc boinc       100 Oct 11 09:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 12:31:07] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 09:32 run_atlas
[2025-10-11 12:31:07] -rw-r--r-- 1 boinc boinc       105 Oct 11 09:32 job.xml
[2025-10-11 12:31:07] -rw-r--r-- 1 boinc boinc      6634 Oct 11 09:32 init_data.xml
[2025-10-11 12:31:07] -rw-r--r-- 2 boinc boinc 222803104 Oct 11 09:32 EVNT.46676267._001490.pool.root.1
[2025-10-11 12:31:07] -rw-r--r-- 2 boinc boinc     15120 Oct 11 09:32 start_atlas.sh
[2025-10-11 12:31:07] drwxrwx--x 2 boinc boinc      4096 Oct 11 09:32 shared
[2025-10-11 12:31:07] -rw-r--r-- 2 boinc boinc    569679 Oct 11 09:32 input.tar.gz
[2025-10-11 12:31:07] -rw-r--r-- 1 boinc boinc         0 Oct 11 09:32 boinc_lockfile
[2025-10-11 12:31:07] -rw-r--r-- 1 boinc boinc      2549 Oct 11 09:32 pandaJob.out
[2025-10-11 12:31:07] -rw------- 1 boinc boinc    975525 Oct 11 09:32 agis_schedconf.cvmfs.json
[2025-10-11 12:31:07] -rw------- 1 boinc boinc   1560580 Oct 11 09:32 agis_ddmendpoints.agis.ALL.json
[2025-10-11 12:31:07] drwx------ 5 boinc boinc      4096 Oct 11 09:32 pilot3
[2025-10-11 12:31:07] -rw------- 1 boinc boinc 193602436 Oct 11 12:29 HITS.46676269._036668.pool.root.1
[2025-10-11 12:31:07] -rw-r--r-- 1 boinc boinc       527 Oct 11 12:29 boinc_task_state.xml
[2025-10-11 12:31:07] -rw------- 1 boinc boinc        95 Oct 11 12:30 pilot_heartbeat.json
[2025-10-11 12:31:07] -rw------- 1 boinc boinc      1033 Oct 11 12:30 memory_monitor_summary.json
[2025-10-11 12:31:07] -rw------- 1 boinc boinc    349726 Oct 11 12:30 log.46676269._036668.job.log.tgz.1
[2025-10-11 12:31:07] -rw------- 1 boinc boinc      7830 Oct 11 12:30 heartbeat.json
[2025-10-11 12:31:07] -rw-r--r-- 1 boinc boinc      8192 Oct 11 12:31 boinc_mmap_file
[2025-10-11 12:31:07] -rw-r--r-- 1 boinc boinc        26 Oct 11 12:31 wrapper_checkpoint.txt
[2025-10-11 12:31:07] -rw------- 1 boinc boinc       891 Oct 11 12:31 pilotlog.txt
[2025-10-11 12:31:07] -rw------- 1 boinc boinc   1515432 Oct 11 12:31 log.46676269._036668.job.log.1
[2025-10-11 12:31:07] -rw------- 1 boinc boinc       357 Oct 11 12:31 output.list
[2025-10-11 12:31:07] -rw-r--r-- 1 boinc boinc       620 Oct 11 12:31 runtime_log
[2025-10-11 12:31:07] -rw------- 1 boinc boinc   1884160 Oct 11 12:31 result.tar.gz
[2025-10-11 12:31:07] -rw-r--r-- 1 boinc boinc      9070 Oct 11 12:31 runtime_log.err
[2025-10-11 12:31:07] -rw------- 1 boinc boinc       665 Oct 11 12:31 FrMNDmRTPR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDms0cNDmfOXEjn.diag
[2025-10-11 12:31:07] -rw-r--r-- 1 boinc boinc     20890 Oct 11 12:31 stderr.txt
[2025-10-11 12:31:07] HITS file was successfully produced:
[2025-10-11 12:31:07] -rw------- 1 boinc boinc 193602436 Oct 11 12:29 shared/HITS.pool.root.1
[2025-10-11 12:31:07]  *** Contents of shared directory: ***
[2025-10-11 12:31:07] total 409076
[2025-10-11 12:31:07] -rw-r--r-- 2 boinc boinc 222803104 Oct 11 09:32 ATLAS.root_0
[2025-10-11 12:31:07] -rw-r--r-- 2 boinc boinc     15120 Oct 11 09:32 start_atlas.sh
[2025-10-11 12:31:07] -rw-r--r-- 2 boinc boinc    569679 Oct 11 09:32 input.tar.gz
[2025-10-11 12:31:07] -rw------- 1 boinc boinc 193602436 Oct 11 12:29 HITS.pool.root.1
[2025-10-11 12:31:07] -rw------- 1 boinc boinc   1884160 Oct 11 12:31 result.tar.gz
12:31:08 (608705): run_atlas exited; CPU time 41407.126357
12:31:08 (608705): called boinc_finish(0)

</stderr_txt>
]]>

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