Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:25:52 (2458727): wrapper (7.7.26015): starting
04:25:52 (2458727): wrapper: running run_atlas (--nthreads 3)
[2025-10-11 04:25:52] Arguments: --nthreads 3
[2025-10-11 04:25:52] Threads: 3
[2025-10-11 04:25:52] Checking for CVMFS
[2025-10-11 04:25:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 04:25:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 04:25:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 04:25:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 04:25:53] 2.9.2.0 1859496 1943 78944 151569 2 57 29325548 36864001 0 130560 0 1575056 99.991 67845 1046 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-11 04:25:53] CVMFS is ok
[2025-10-11 04:25:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 04:25:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 04:25:53] Further information can be found at the LHC@home message board.
[2025-10-11 04:25:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 04:25:53] Checking for apptainer binary...
[2025-10-11 04:25:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 04:25:53] Running /usr/bin/apptainer --version
[2025-10-11 04:25:53] apptainer version 1.4.1-1.1
[2025-10-11 04:25:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 04:25:53] atlasA228b
[2025-10-11 04:25:53] apptainer works
[2025-10-11 04:25:53] Set ATHENA_PROC_NUMBER=3
[2025-10-11 04:25:53] Set ATHENA_CORE_NUMBER=3
[2025-10-11 04:25:53] Starting ATLAS job with PandaID=6837555307
[2025-10-11 04:25:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 05:44:11]  *** The last 200 lines of the pilot log: ***
[2025-10-11 05:44:11] 2025-10-11 03:43:18,722 | INFO     | all job control threads have been joined
[2025-10-11 05:44:11] 2025-10-11 03:43:19,108 | INFO     | [data] copytool_out thread has finished
[2025-10-11 05:44:11] 2025-10-11 03:43:19,109 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 05:44:11] 2025-10-11 03:43:19,124 | INFO     | [job] validate thread has finished
[2025-10-11 05:44:11] 2025-10-11 03:43:19,164 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 05:44:11] 2025-10-11 03:43:19,210 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 05:44:11] 2025-10-11 03:43:19,313 | INFO     | [payload] validate_post thread has finished
[2025-10-11 05:44:11] 2025-10-11 03:43:19,418 | INFO     | [payload] failed_post thread has finished
[2025-10-11 05:44:11] 2025-10-11 03:43:19,728 | INFO     | [job] control thread has finished
[2025-10-11 05:44:11] 2025-10-11 03:43:21,109 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 05:44:11] 2025-10-11 03:43:46,714 | INFO     | PID=2462453 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 05:44:11] 2025-10-11 03:43:46,715 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 05:44:11] 2025-10-11 03:43:46,715 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 05:44:11] 2025-10-11 03:43:46,715 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 05:44:11] 2025-10-11 03:44:04,507 | INFO     | [monitor] cgroup control has ended
[2025-10-11 05:44:11] 2025-10-11 03:44:05,911 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139663246620480)>', '<ExcThread(monitor, started 139662530176768)>']
[2025-10-11 05:44:11] 2025-10-11 03:44:06,811 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 05:44:11] 2025-10-11 03:44:06,812 | INFO     | [monitor] control thread has ended
[2025-10-11 05:44:11] 2025-10-11 03:44:10,937 | INFO     | all workflow threads have been joined
[2025-10-11 05:44:11] 2025-10-11 03:44:10,937 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 05:44:11] 2025-10-11 03:44:10,937 | INFO     | traces error code: 0
[2025-10-11 05:44:11] 2025-10-11 03:44:10,938 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 05:44:11] 2025-10-11 03:44:10,990 [wrapper] ==== pilot stdout END ====
[2025-10-11 05:44:11] 2025-10-11 03:44:10,992 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 05:44:11] 2025-10-11 03:44:10,995 [wrapper] pilotpid: 2462453
[2025-10-11 05:44:11] 2025-10-11 03:44:10,997 [wrapper] Pilot exit status: 0
[2025-10-11 05:44:11] 2025-10-11 03:44:11,005 [wrapper] pandaids: 6837555307
[2025-10-11 05:44:11] 2025-10-11 03:44:11,024 [wrapper] cleanup supervisor_pilot 2480900 2462454
[2025-10-11 05:44:11] 2025-10-11 03:44:11,026 [wrapper] Test setup, not cleaning
[2025-10-11 05:44:11] 2025-10-11 03:44:11,029 [wrapper] apfmon messages muted
[2025-10-11 05:44:11] 2025-10-11 03:44:11,031 [wrapper] ==== wrapper stdout END ====
[2025-10-11 05:44:11] 2025-10-11 03:44:11,034 [wrapper] ==== wrapper stderr END ====
[2025-10-11 05:44:11]  *** Error codes and diagnostics ***
[2025-10-11 05:44:11]     "exeErrorCode": 0,
[2025-10-11 05:44:11]     "exeErrorDiag": "",
[2025-10-11 05:44:11]     "pilotErrorCode": 0,
[2025-10-11 05:44:11]     "pilotErrorDiag": "",
[2025-10-11 05:44:11]  *** Listing of results directory ***
[2025-10-11 05:44:11] total 404348
[2025-10-11 05:44:11] -rw-r--r-- 1 boinc boinc    557409 Oct 10 11:06 pilot3.tar.gz
[2025-10-11 05:44:11] -rwx------ 1 boinc boinc     36292 Oct 10 11:17 runpilot2-wrapper.sh
[2025-10-11 05:44:11] -rw-r--r-- 1 boinc boinc      5112 Oct 10 11:17 queuedata.json
[2025-10-11 05:44:11] -rw-r--r-- 1 boinc boinc       100 Oct 11 04:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 05:44:11] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 04:25 run_atlas
[2025-10-11 05:44:11] -rw-r--r-- 1 boinc boinc       105 Oct 11 04:25 job.xml
[2025-10-11 05:44:11] -rw-r--r-- 2 boinc boinc 220905141 Oct 11 04:25 EVNT.46676267._001457.pool.root.1
[2025-10-11 05:44:11] drwxrwx--x 2 boinc boinc      4096 Oct 11 04:25 shared
[2025-10-11 05:44:11] -rw-r--r-- 2 boinc boinc    569682 Oct 11 04:25 input.tar.gz
[2025-10-11 05:44:11] -rw-r--r-- 2 boinc boinc     15120 Oct 11 04:25 start_atlas.sh
[2025-10-11 05:44:11] -rw-r--r-- 1 boinc boinc         0 Oct 11 04:25 boinc_setup_complete
[2025-10-11 05:44:11] -rw-r--r-- 1 boinc boinc      6449 Oct 11 04:25 init_data.xml
[2025-10-11 05:44:11] -rw-r--r-- 1 boinc boinc         0 Oct 11 04:25 boinc_lockfile
[2025-10-11 05:44:11] -rw-r--r-- 1 boinc boinc      2550 Oct 11 04:25 pandaJob.out
[2025-10-11 05:44:11] -rw------- 1 boinc boinc    975509 Oct 11 04:25 agis_schedconf.cvmfs.json
[2025-10-11 05:44:11] -rw------- 1 boinc boinc   1560580 Oct 11 04:25 agis_ddmendpoints.agis.ALL.json
[2025-10-11 05:44:11] drwx------ 5 boinc boinc      4096 Oct 11 04:25 pilot3
[2025-10-11 05:44:11] -rw------- 1 boinc boinc 187375316 Oct 11 05:42 HITS.46676269._035855.pool.root.1
[2025-10-11 05:44:11] -rw-r--r-- 1 boinc boinc       530 Oct 11 05:42 boinc_task_state.xml
[2025-10-11 05:44:11] -rw------- 1 boinc boinc      1017 Oct 11 05:43 memory_monitor_summary.json
[2025-10-11 05:44:11] -rw------- 1 boinc boinc    257208 Oct 11 05:43 log.46676269._035855.job.log.tgz.1
[2025-10-11 05:44:11] -rw------- 1 boinc boinc      7763 Oct 11 05:43 heartbeat.json
[2025-10-11 05:44:11] -rw------- 1 boinc boinc        95 Oct 11 05:43 pilot_heartbeat.json
[2025-10-11 05:44:11] -rw-r--r-- 1 boinc boinc      8192 Oct 11 05:44 boinc_mmap_file
[2025-10-11 05:44:11] -rw-r--r-- 1 boinc boinc        27 Oct 11 05:44 wrapper_checkpoint.txt
[2025-10-11 05:44:11] -rw------- 1 boinc boinc      4938 Oct 11 05:44 pilotlog.txt
[2025-10-11 05:44:11] -rw------- 1 boinc boinc    684650 Oct 11 05:44 log.46676269._035855.job.log.1
[2025-10-11 05:44:11] -rw------- 1 boinc boinc       357 Oct 11 05:44 output.list
[2025-10-11 05:44:11] -rw-r--r-- 1 boinc boinc       620 Oct 11 05:44 runtime_log
[2025-10-11 05:44:11] -rw------- 1 boinc boinc    962560 Oct 11 05:44 result.tar.gz
[2025-10-11 05:44:11] -rw-r--r-- 1 boinc boinc      8797 Oct 11 05:44 runtime_log.err
[2025-10-11 05:44:11] -rw------- 1 boinc boinc       662 Oct 11 05:44 2MnNDmXQOR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm9gPMDm9kf8Xn.diag
[2025-10-11 05:44:11] -rw-r--r-- 1 boinc boinc      5717 Oct 11 05:44 stderr.txt
[2025-10-11 05:44:11] HITS file was successfully produced:
[2025-10-11 05:44:11] -rw------- 1 boinc boinc 187375316 Oct 11 05:42 shared/HITS.pool.root.1
[2025-10-11 05:44:11]  *** Contents of shared directory: ***
[2025-10-11 05:44:11] total 400236
[2025-10-11 05:44:11] -rw-r--r-- 2 boinc boinc 220905141 Oct 11 04:25 ATLAS.root_0
[2025-10-11 05:44:11] -rw-r--r-- 2 boinc boinc    569682 Oct 11 04:25 input.tar.gz
[2025-10-11 05:44:11] -rw-r--r-- 2 boinc boinc     15120 Oct 11 04:25 start_atlas.sh
[2025-10-11 05:44:11] -rw------- 1 boinc boinc 187375316 Oct 11 05:42 HITS.pool.root.1
[2025-10-11 05:44:11] -rw------- 1 boinc boinc    962560 Oct 11 05:44 result.tar.gz
05:44:12 (2458727): run_atlas exited; CPU time 13201.623631
05:44:12 (2458727): called boinc_finish(0)

</stderr_txt>
]]>

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