Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:07:35 (3302187): wrapper (7.7.26015): starting
11:07:35 (3302187): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 11:07:35] Arguments: --nthreads 12
[2025-10-10 11:07:35] Threads: 12
[2025-10-10 11:07:35] Checking for CVMFS
[2025-10-10 11:07:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 11:07:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 11:07:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 11:07:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 11:07:36] 2.11.5.0 2671 28587 232344 151556 2 827 44570593 45568001 18887 130560 0 271633572 99.871 108318032 22345 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-10 11:07:36] CVMFS is ok
[2025-10-10 11:07:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 11:07:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 11:07:36] Further information can be found at the LHC@home message board.
[2025-10-10 11:07:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 11:07:36] Checking for apptainer binary...
[2025-10-10 11:07:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 11:07:36] Running /usr/bin/apptainer --version
[2025-10-10 11:07:36] apptainer version 1.4.1-1.el9
[2025-10-10 11:07:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 11:07:36] wns0056.triumf.lcg
[2025-10-10 11:07:36] apptainer works
[2025-10-10 11:07:36] Set ATHENA_PROC_NUMBER=12
[2025-10-10 11:07:36] Set ATHENA_CORE_NUMBER=12
[2025-10-10 11:07:36] Starting ATLAS job with PandaID=6837667392
[2025-10-10 11:07:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 11:13:16]  *** The last 200 lines of the pilot log: ***
[2025-10-10 11:13:16] 2025-10-10 18:12:13,521 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 11:13:16] 2025-10-10 18:12:13,521 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 11:13:16] 2025-10-10 18:12:13,521 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | WARNING  | wrong length of table data, x=[1760119768.0], y=[25425.0] (must be same and length>=4)
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | could have reported an average CPU frequency of 2633 MHz (4 samples)
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | ..............................
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . Timing measurements:
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . get job = 0 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . initial setup = 3 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . payload setup = 18 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . stage-in = 0 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . payload execution = 49 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . stage-out = 0 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . log creation = 0 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,523 | INFO     | ..............................
[2025-10-10 11:13:16] 2025-10-10 18:12:13,523 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 11:13:16] 2025-10-10 18:12:13,523 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837667392/pilotlog.txt
[2025-10-10 11:13:16] 2025-10-10 18:12:13,580 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-10 11:13:16] - Log from pilotlog.txt -
[2025-10-10 11:13:16] 2025-10-10 18:12:13,520 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837667392/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 11:13:16] 2025-10-10 18:12:13,521 | INFO     | extracted standard info from prmon json
[2025-10-10 11:13:16] 2025-10-10 18:12:13,521 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 11:13:16] 2025-10-10 18:12:13,521 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 11:13:16] 2025-10-10 18:12:13,521 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 11:13:16] 2025-10-10 18:12:13,521 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | WARNING  | wrong length of table data, x=[1760119768.0], y=[25425.0] (must be same and length>=4)
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | could have reported an average CPU frequency of 2633 MHz (4 samples)
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | ..............................
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . Timing measurements:
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . get job = 0 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . initial setup = 3 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . payload setup = 18 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . stage-in = 0 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . payload execution = 49 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . stage-out = 0 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . log creation = 0 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,523 | INFO     | ..............................
[2025-10-10 11:13:16] 2025-10-10 18:12:13,523 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 11:13:16] 2025-10-10 18:12:13,523 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837667392/pilotlog.txt
[2025-10-10 11:13:16] 2025-10-10 18:12:13,585 | WARNING  | 
[2025-10-10 11:13:16] [begin log extracts]
[2025-10-10 11:13:16] - Log from pilotlog.txt -
[2025-10-10 11:13:16] 2025-10-10 18:12:13,520 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837667392/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 11:13:16] 2025-10-10 18:12:13,521 | INFO     | extracted standard info from prmon json
[2025-10-10 11:13:16] 2025-10-10 18:12:13,521 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 11:13:16] 2025-10-10 18:12:13,521 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 11:13:16] 2025-10-10 18:12:13,521 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 11:13:16] 2025-10-10 18:12:13,521 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | WARNING  | wrong length of table data, x=[1760119768.0], y=[25425.0] (must be same and length>=4)
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | could have reported an average CPU frequency of 2633 MHz (4 samples)
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | ..............................
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . Timing measurements:
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . get job = 0 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . initial setup = 3 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . payload setup = 18 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . stage-in = 0 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . payload execution = 49 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . stage-out = 0 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,522 | INFO     | . log creation = 0 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,523 | INFO     | ..............................
[2025-10-10 11:13:16] 2025-10-10 18:12:13,523 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 11:13:16] 2025-10-10 18:12:13,523 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837667392/pilotlog.txt
[2025-10-10 11:13:16] [end log extracts]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,585 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-10 11:13:16] 2025-10-10 18:12:13,586 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-10 11:13:16] 2025-10-10 18:12:13,705 | INFO     | 
[2025-10-10 11:13:16] 2025-10-10 18:12:13,709 | INFO     | job summary report
[2025-10-10 11:13:16] 2025-10-10 18:12:13,709 | INFO     | --------------------------------------------------
[2025-10-10 11:13:16] 2025-10-10 18:12:13,709 | INFO     | PanDA job id: 6837667392
[2025-10-10 11:13:16] 2025-10-10 18:12:13,709 | INFO     | task id: 46676269
[2025-10-10 11:13:16] 2025-10-10 18:12:13,709 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-10 11:09:51,650 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-10 11:13:16] 2025-10-10 18:12:13,709 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 11:13:16] 2025-10-10 18:12:13,709 | INFO     | pilot state: failed 
[2025-10-10 11:13:16] 2025-10-10 18:12:13,709 | INFO     | transexitcode: 65
[2025-10-10 11:13:16] 2025-10-10 18:12:13,709 | INFO     | exeerrorcode: 65
[2025-10-10 11:13:16] 2025-10-10 18:12:13,709 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 11:13:16] 2025-10-10 18:12:13,709 | INFO     | exitcode: 65
[2025-10-10 11:13:16] 2025-10-10 18:12:13,709 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 11:13:16] 2025-10-10 18:12:13,709 | INFO     | cpuconsumptiontime: 18 s
[2025-10-10 11:13:16] 2025-10-10 18:12:13,709 | INFO     | nevents: 0
[2025-10-10 11:13:16] 2025-10-10 18:12:13,709 | INFO     | neventsw: 0
[2025-10-10 11:13:16] 2025-10-10 18:12:13,709 | INFO     | pid: 3325660
[2025-10-10 11:13:16] 2025-10-10 18:12:13,710 | INFO     | pgrp: 3325660
[2025-10-10 11:13:16] 2025-10-10 18:12:13,710 | INFO     | corecount: 12
[2025-10-10 11:13:16] 2025-10-10 18:12:13,710 | INFO     | event service: False
[2025-10-10 11:13:16] 2025-10-10 18:12:13,710 | INFO     | sizes: {0: 2348854, 11: 2348854, 15: 2349144, 22: 2349172, 72: 2372414, 73: 2376706, 76: 2376862, 206: 2377056}
[2025-10-10 11:13:16] 2025-10-10 18:12:13,710 | INFO     | --------------------------------------------------
[2025-10-10 11:13:16] 2025-10-10 18:12:13,710 | INFO     | 
[2025-10-10 11:13:16] 2025-10-10 18:12:13,710 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-10 11:13:16] 2025-10-10 18:12:13,757 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,758 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,758 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,758 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,758 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,758 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,758 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,758 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,758 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,758 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,758 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,758 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,758 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,758 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,758 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,758 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,758 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,758 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 11:13:16] 2025-10-10 18:12:13,758 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,758 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 11:13:16] 2025-10-10 18:12:13,759 | INFO     | job 6837667392 has completed (purged errors)
[2025-10-10 11:13:16] 2025-10-10 18:12:13,759 | INFO     | overall cleanup function is called
[2025-10-10 11:13:16] 2025-10-10 18:12:14,765 | INFO     | --- collectZombieJob: --- 10, [3325660]
[2025-10-10 11:13:16] 2025-10-10 18:12:14,766 | INFO     | zombie collector waiting for pid 3325660
[2025-10-10 11:13:16] 2025-10-10 18:12:14,769 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 11:13:16] 2025-10-10 18:12:14,770 | INFO     | collected zombie processes
[2025-10-10 11:13:16] 2025-10-10 18:12:14,770 | INFO     | will attempt to kill all subprocesses of pid=3325660
[2025-10-10 11:13:16] 2025-10-10 18:12:15,091 | INFO     | process IDs to be killed: [3325660] (in reverse order)
[2025-10-10 11:13:16] 2025-10-10 18:12:15,283 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 11:13:16] 2025-10-10 18:12:15,283 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 11:13:16] 2025-10-10 18:12:15,302 | INFO     | did not find any defunct processes belonging to 3325660
[2025-10-10 11:13:16] 2025-10-10 18:12:15,314 | INFO     | did not find any defunct processes belonging to 3325660
[2025-10-10 11:13:16] 2025-10-10 18:12:15,315 | INFO     | ready for new job
[2025-10-10 11:13:16] 2025-10-10 18:12:15,315 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 11:13:16] 2025-10-10 18:12:15,316 | INFO     | ***************************************
[2025-10-10 11:13:16] 2025-10-10 18:12:15,317 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 11:13:16] 2025-10-10 18:12:15,317 | INFO     | ***************************************
[2025-10-10 11:13:16] 2025-10-10 18:12:15,317 | INFO     | 
[2025-10-10 11:13:16] 2025-10-10 18:12:15,320 | INFO     | architecture information:
[2025-10-10 11:13:16] 2025-10-10 18:12:15,320 | INFO     | executing command: cat /etc/os-release
[2025-10-10 11:13:16] 2025-10-10 18:12:15,350 | INFO     | cat /etc/os-release:
[2025-10-10 11:13:16] NAME="CentOS Linux"
[2025-10-10 11:13:16] VERSION="7 (Core)"
[2025-10-10 11:13:16] ID="centos"
[2025-10-10 11:13:16] ID_LIKE="rhel fedora"
[2025-10-10 11:13:16] VERSION_ID="7"
[2025-10-10 11:13:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 11:13:16] ANSI_COLOR="0;31"
[2025-10-10 11:13:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 11:13:16] HOME_URL="https://www.centos.org/"
[2025-10-10 11:13:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 11:13:16] 
[2025-10-10 11:13:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 11:13:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 11:13:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 11:13:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 11:13:16] 
[2025-10-10 11:13:16] 2025-10-10 18:12:15,350 | INFO     | ***************************************
[2025-10-10 11:13:16] 2025-10-10 18:12:15,854 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-10 11:13:16] 2025-10-10 18:12:15,910 | INFO     | sufficient remaining disk space (1726045224960 B)
[2025-10-10 11:13:16] 2025-10-10 18:12:15,910 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 11:13:16] 2025-10-10 18:12:15,910 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 11:13:16] 2025-10-10 18:12:15,911 | INFO     | update_server=False
[2025-10-10 11:13:16] 2025-10-10 18:12:15,911 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 11:13:16] 2025-10-10 18:12:16,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 11:13:16] 2025-10-10 18:12:16,671 | INFO     | all payload control threads have been joined
[2025-10-10 11:13:16] 2025-10-10 18:12:16,739 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 11:13:16] 2025-10-10 18:12:16,739 | INFO     | aborting loop
[2025-10-10 11:13:16] 2025-10-10 18:12:16,810 | INFO     | all data control threads have been joined
[2025-10-10 11:13:16] 2025-10-10 18:12:16,917 | INFO     | [job] retrieve thread has finished
[2025-10-10 11:13:16] 2025-10-10 18:12:16,932 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 11:13:16] 2025-10-10 18:12:17,211 | INFO     | all job control threads have been joined
[2025-10-10 11:13:16] 2025-10-10 18:12:17,218 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 11:13:16] 2025-10-10 18:12:17,278 | INFO     | [payload] validate_post thread has finished
[2025-10-10 11:13:16] 2025-10-10 18:12:17,415 | INFO     | [job] validate thread has finished
[2025-10-10 11:13:16] 2025-10-10 18:12:17,428 | INFO     | [data] copytool_in thread has finished
[2025-10-10 11:13:16] 2025-10-10 18:12:17,444 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 11:13:16] 2025-10-10 18:12:17,480 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 11:13:16] 2025-10-10 18:12:17,677 | INFO     | [payload] control thread has finished
[2025-10-10 11:13:16] 2025-10-10 18:12:17,742 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 11:13:16] 2025-10-10 18:12:17,744 | INFO     | [job] job monitor thread has finished
[2025-10-10 11:13:16] 2025-10-10 18:12:17,823 | INFO     | [data] control thread has finished
[2025-10-10 11:13:16] 2025-10-10 18:12:18,129 | INFO     | [payload] failed_post thread has finished
[2025-10-10 11:13:16] 2025-10-10 18:12:18,217 | INFO     | [job] control thread has finished
[2025-10-10 11:13:16] 2025-10-10 18:12:18,730 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 11:13:16] 2025-10-10 18:12:19,223 | INFO     | [data] copytool_out thread has finished
[2025-10-10 11:13:16] 2025-10-10 18:12:19,736 | INFO     | [job] queue monitor thread has finished
[2025-10-10 11:13:16] 2025-10-10 18:12:20,015 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 11:13:16] 2025-10-10 18:12:45,797 | INFO     | PID=3311168 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 11:13:16] 2025-10-10 18:12:45,797 | INFO     | .. there are 42 such processes running
[2025-10-10 11:13:16] 2025-10-10 18:12:45,797 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 11:13:16] 2025-10-10 18:12:45,797 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 11:13:16] 2025-10-10 18:12:45,797 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 11:13:16] 2025-10-10 18:13:08,614 | INFO     | [monitor] cgroup control has ended
[2025-10-10 11:13:16] 2025-10-10 18:13:10,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139860072896320)>', '<ExcThread(monitor, started 139859150755584)>']
[2025-10-10 11:13:16] 2025-10-10 18:13:10,982 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 11:13:16] 2025-10-10 18:13:10,983 | INFO     | [monitor] control thread has ended
[2025-10-10 11:13:16] 2025-10-10 18:13:15,664 | INFO     | all workflow threads have been joined
[2025-10-10 11:13:16] 2025-10-10 18:13:15,665 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 11:13:16] 2025-10-10 18:13:15,665 | INFO     | traces error code: 0
[2025-10-10 11:13:16] 2025-10-10 18:13:15,666 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 11:13:16] 2025-10-10 18:13:16,169 [wrapper] ==== pilot stdout END ====
[2025-10-10 11:13:16] 2025-10-10 18:13:16,172 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 11:13:16] 2025-10-10 18:13:16,173 [wrapper] pilotpid: 3311168
[2025-10-10 11:13:16] 2025-10-10 18:13:16,175 [wrapper] Pilot exit status: 0
[2025-10-10 11:13:16] 2025-10-10 18:13:16,207 [wrapper] pandaids: 6837667392
[2025-10-10 11:13:16] 2025-10-10 18:13:16,294 [wrapper] cleanup supervisor_pilot 3311175 3311169
[2025-10-10 11:13:16] 2025-10-10 18:13:16,298 [wrapper] Test setup, not cleaning
[2025-10-10 11:13:16] 2025-10-10 18:13:16,301 [wrapper] apfmon messages muted
[2025-10-10 11:13:16] 2025-10-10 18:13:16,305 [wrapper] ==== wrapper stdout END ====
[2025-10-10 11:13:16] 2025-10-10 18:13:16,314 [wrapper] ==== wrapper stderr END ====
[2025-10-10 11:13:16]  *** Error codes and diagnostics ***
[2025-10-10 11:13:16]     "exeErrorCode": 65,
[2025-10-10 11:13:16]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 11:13:16]     "pilotErrorCode": 1305,
[2025-10-10 11:13:16]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 11:13:16]  *** Listing of results directory ***
[2025-10-10 11:13:16] total 219464
[2025-10-10 11:13:16] -rw-r--r--. 1 boinc boinc    557409 Oct 10 08:29 pilot3.tar.gz
[2025-10-10 11:13:16] -rwx------. 1 boinc boinc     36292 Oct 10 08:31 runpilot2-wrapper.sh
[2025-10-10 11:13:16] -rw-r--r--. 1 boinc boinc      5112 Oct 10 08:31 queuedata.json
[2025-10-10 11:13:16] -rw-r--r--. 1 boinc boinc       100 Oct 10 11:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 11:13:16] -rwxr-xr-x. 1 boinc boinc      7986 Oct 10 11:07 run_atlas
[2025-10-10 11:13:16] -rw-r--r--. 1 boinc boinc       105 Oct 10 11:07 job.xml
[2025-10-10 11:13:16] -rw-r--r--. 2 boinc boinc    569676 Oct 10 11:07 input.tar.gz
[2025-10-10 11:13:16] -rw-r--r--. 1 boinc boinc      6593 Oct 10 11:07 init_data.xml
[2025-10-10 11:13:16] -rw-r--r--. 2 boinc boinc 220594757 Oct 10 11:07 EVNT.46676267._001654.pool.root.1
[2025-10-10 11:13:16] -rw-r--r--. 2 boinc boinc     15120 Oct 10 11:07 start_atlas.sh
[2025-10-10 11:13:16] drwxrwx--x. 2 boinc boinc      4096 Oct 10 11:07 shared
[2025-10-10 11:13:16] -rw-r--r--. 1 boinc boinc         0 Oct 10 11:07 boinc_lockfile
[2025-10-10 11:13:16] -rw-r--r--. 1 boinc boinc      2550 Oct 10 11:07 pandaJob.out
[2025-10-10 11:13:16] -rw-------. 1 boinc boinc    975525 Oct 10 11:08 agis_schedconf.cvmfs.json
[2025-10-10 11:13:16] -rw-------. 1 boinc boinc   1560580 Oct 10 11:08 agis_ddmendpoints.agis.ALL.json
[2025-10-10 11:13:16] drwx------. 5 boinc boinc      4096 Oct 10 11:08 pilot3
[2025-10-10 11:13:16] -rw-------. 1 boinc boinc       971 Oct 10 11:09 memory_monitor_summary.json
[2025-10-10 11:13:16] -rw-------. 1 boinc boinc     22135 Oct 10 11:10 log.46676269._040805.job.log.tgz.1
[2025-10-10 11:13:16] -rw-------. 1 boinc boinc        95 Oct 10 11:12 pilot_heartbeat.json
[2025-10-10 11:13:16] -rw-------. 1 boinc boinc      8407 Oct 10 11:12 heartbeat.json
[2025-10-10 11:13:16] -rw-r--r--. 1 boinc boinc       523 Oct 10 11:12 boinc_task_state.xml
[2025-10-10 11:13:16] -rw-r--r--. 1 boinc boinc      8192 Oct 10 11:13 boinc_mmap_file
[2025-10-10 11:13:16] -rw-r--r--. 1 boinc boinc        22 Oct 10 11:13 wrapper_checkpoint.txt
[2025-10-10 11:13:16] -rw-------. 1 boinc boinc      4823 Oct 10 11:13 pilotlog.txt
[2025-10-10 11:13:16] -rw-------. 1 boinc boinc     91844 Oct 10 11:13 log.46676269._040805.job.log.1
[2025-10-10 11:13:16] -rw-------. 1 boinc boinc       188 Oct 10 11:13 output.list
[2025-10-10 11:13:16] -rw-r--r--. 1 boinc boinc       620 Oct 10 11:13 runtime_log
[2025-10-10 11:13:16] -rw-------. 1 boinc boinc    133120 Oct 10 11:13 result.tar.gz
[2025-10-10 11:13:16] -rw-r--r--. 1 boinc boinc      8528 Oct 10 11:13 runtime_log.err
[2025-10-10 11:13:16] -rw-------. 1 boinc boinc       647 Oct 10 11:13 rUhMDm7GUR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmZAQMDmnRjjDn.diag
[2025-10-10 11:13:16] -rw-r--r--. 1 boinc boinc     21794 Oct 10 11:13 stderr.txt
[2025-10-10 11:13:16] No HITS result produced
[2025-10-10 11:13:16]  *** Contents of shared directory: ***
[2025-10-10 11:13:16] total 216140
[2025-10-10 11:13:16] -rw-r--r--. 2 boinc boinc    569676 Oct 10 11:07 input.tar.gz
[2025-10-10 11:13:16] -rw-r--r--. 2 boinc boinc 220594757 Oct 10 11:07 ATLAS.root_0
[2025-10-10 11:13:16] -rw-r--r--. 2 boinc boinc     15120 Oct 10 11:07 start_atlas.sh
[2025-10-10 11:13:16] -rw-------. 1 boinc boinc    133120 Oct 10 11:13 result.tar.gz
11:13:18 (3302187): run_atlas exited; CPU time 28.525272
11:13:18 (3302187): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN