Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:06:54 (30296): wrapper (7.7.26015): starting
14:06:54 (30296): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 14:06:54] Arguments: --nthreads 8
[2025-10-10 14:06:54] Threads: 8
[2025-10-10 14:06:54] Checking for CVMFS
[2025-10-10 14:06:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 14:06:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 14:06:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 14:06:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 14:06:54] 2.11.2.0 3213 625277 246848 151557 1 57 18244990 20275200 917 130560 1 352155008 99.992 25977265 20132 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 14:06:54] CVMFS is ok
[2025-10-10 14:06:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 14:06:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 14:06:54] Further information can be found at the LHC@home message board.
[2025-10-10 14:06:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 14:06:54] Checking for apptainer binary...
[2025-10-10 14:06:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 14:06:54] Running /usr/bin/apptainer --version
[2025-10-10 14:06:54] apptainer version 1.3.2-1.el7
[2025-10-10 14:06:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 14:06:55] c-205-38.aglt2.org
[2025-10-10 14:06:55] apptainer works
[2025-10-10 14:06:55] Set ATHENA_PROC_NUMBER=8
[2025-10-10 14:06:55] Set ATHENA_CORE_NUMBER=8
[2025-10-10 14:06:55] Starting ATLAS job with PandaID=6828264951
[2025-10-10 14:06:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 15:07:14]  *** The last 200 lines of the pilot log: ***
[2025-10-10 15:07:14]  lfn=log.46376994._016566.job.log.tgz.1
[2025-10-10 15:07:14]  mtime=0
[2025-10-10 15:07:14]  protocol_id=None
[2025-10-10 15:07:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-10 15:07:14]  replicas=None
[2025-10-10 15:07:14]  scope=mc23_13p6TeV
[2025-10-10 15:07:14]  status=None
[2025-10-10 15:07:14]  status_code=0
[2025-10-10 15:07:14]  storage_token=
[2025-10-10 15:07:14]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6828264951/log.46376994._016566.job.log.tgz.1
[2025-10-10 15:07:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/76/log.46376994._016566.job.log.tgz.1
[2025-10-10 15:07:14]  workdir=None
[2025-10-10 15:07:14] ]
[2025-10-10 15:07:14] 2025-10-10 19:06:19,782 | INFO     | transferring file log.46376994._016566.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6828264951/log.46376994._016566.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-10 15:07:14] 2025-10-10 19:06:19,782 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6828264951/log.46376994._016566.job.log.tgz.1 /tmp/boinchome/slots/1/log.46376994._016566.job
[2025-10-10 15:07:14] 2025-10-10 19:06:19,800 | INFO     | adding to output.list: log.46376994._016566.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/76/log.46376994._016566.job.log.tg
[2025-10-10 15:07:14] 2025-10-10 19:06:19,801 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 15:07:14] 2025-10-10 19:06:19,801 | INFO     | summary of transferred files:
[2025-10-10 15:07:14] 2025-10-10 19:06:19,802 | INFO     |  -- lfn=log.46376994._016566.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 15:07:14] 2025-10-10 19:06:19,802 | INFO     | stage-out finished correctly
[2025-10-10 15:07:14] 2025-10-10 19:06:20,999 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 15:07:14] 2025-10-10 19:06:21,217 | INFO     | time since job start (3558s) is within the limit (172800.0s)
[2025-10-10 15:07:14] 2025-10-10 19:06:21,288 | INFO     | job 6828264951 has state=finished
[2025-10-10 15:07:14] 2025-10-10 19:06:21,289 | INFO     | preparing for final server update for job 6828264951 in state='finished'
[2025-10-10 15:07:14] 2025-10-10 19:06:21,289 | INFO     | this job has now completed (state=finished)
[2025-10-10 15:07:14] 2025-10-10 19:06:21,289 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 15:07:14] 2025-10-10 19:06:21,289 | INFO     | log transfer has been attempted: DONE
[2025-10-10 15:07:14] 2025-10-10 19:06:21,289 | INFO     | job 6828264951 has finished - writing final server update
[2025-10-10 15:07:14] 2025-10-10 19:06:21,289 | INFO     | total number of processed events: 400 (read)
[2025-10-10 15:07:14] 2025-10-10 19:06:21,290 | INFO     | executing command: lscpu
[2025-10-10 15:07:14] 2025-10-10 19:06:21,318 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 15:07:14] 2025-10-10 19:06:22,225 | INFO     | monitor loop #272: job 0:6828264951 is in state 'finished'
[2025-10-10 15:07:14] 2025-10-10 19:06:22,226 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 15:07:14] 2025-10-10 19:06:23,222 | INFO     | time since job start (3560s) is within the limit (172800.0s)
[2025-10-10 15:07:14] 2025-10-10 19:06:23,651 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 15:07:14] 2025-10-10 19:06:23,655 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2747.2408125
[2025-10-10 15:07:14] 2025-10-10 19:06:23,659 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6828264951/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 15:07:14] 2025-10-10 19:06:23,660 | INFO     | extracted standard info from prmon json
[2025-10-10 15:07:14] 2025-10-10 19:06:23,660 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 15:07:14] 2025-10-10 19:06:23,660 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 15:07:14] 2025-10-10 19:06:23,660 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 15:07:14] 2025-10-10 19:06:23,660 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 15:07:14] 2025-10-10 19:06:23,662 | INFO     | fitting pss+swap vs Time
[2025-10-10 15:07:14] 2025-10-10 19:06:23,662 | INFO     | sum of square deviations: 41117050.0
[2025-10-10 15:07:14] 2025-10-10 19:06:23,663 | INFO     | sum of deviations: -1480171832.0
[2025-10-10 15:07:14] 2025-10-10 19:06:23,663 | INFO     | mean x: 1760121473.0
[2025-10-10 15:07:14] 2025-10-10 19:06:23,663 | INFO     | mean y: 2543978.0196078434
[2025-10-10 15:07:14] 2025-10-10 19:06:23,663 | INFO     | -- intersect: 63365120457.43504
[2025-10-10 15:07:14] 2025-10-10 19:06:23,663 | INFO     | intersect: 63365120457.43504
[2025-10-10 15:07:14] 2025-10-10 19:06:23,663 | INFO     | chi2: 0.0391346812490707
[2025-10-10 15:07:14] 2025-10-10 19:06:23,663 | INFO     | -- intersect: 63365120457.43504
[2025-10-10 15:07:14] 2025-10-10 19:06:23,664 | INFO     | current memory leak: -36.00 B/s (using 51 data points, chi2=0.04)
[2025-10-10 15:07:14] 2025-10-10 19:06:23,664 | INFO     | could have reported an average CPU frequency of 2951 MHz (5 samples)
[2025-10-10 15:07:14] 2025-10-10 19:06:23,664 | INFO     | ..............................
[2025-10-10 15:07:14] 2025-10-10 19:06:23,664 | INFO     | . Timing measurements:
[2025-10-10 15:07:14] 2025-10-10 19:06:23,664 | INFO     | . get job = 0 s
[2025-10-10 15:07:14] 2025-10-10 19:06:23,664 | INFO     | . initial setup = 2 s
[2025-10-10 15:07:14] 2025-10-10 19:06:23,664 | INFO     | . payload setup = 3 s
[2025-10-10 15:07:14] 2025-10-10 19:06:23,665 | INFO     | . stage-in = 0 s
[2025-10-10 15:07:14] 2025-10-10 19:06:23,665 | INFO     | . payload execution = 3535 s
[2025-10-10 15:07:14] 2025-10-10 19:06:23,665 | INFO     | . stage-out = 0 s
[2025-10-10 15:07:14] 2025-10-10 19:06:23,665 | INFO     | . log creation = 0 s
[2025-10-10 15:07:14] 2025-10-10 19:06:23,665 | INFO     | ..............................
[2025-10-10 15:07:14] 2025-10-10 19:06:23,741 | INFO     | 
[2025-10-10 15:07:14] 2025-10-10 19:06:23,742 | INFO     | job summary report
[2025-10-10 15:07:14] 2025-10-10 19:06:23,742 | INFO     | --------------------------------------------------
[2025-10-10 15:07:14] 2025-10-10 19:06:23,742 | INFO     | PanDA job id: 6828264951
[2025-10-10 15:07:14] 2025-10-10 19:06:23,742 | INFO     | task id: 46376994
[2025-10-10 15:07:14] 2025-10-10 19:06:23,742 | INFO     | errors: (none)
[2025-10-10 15:07:14] 2025-10-10 19:06:23,742 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 15:07:14] 2025-10-10 19:06:23,743 | INFO     | pilot state: finished 
[2025-10-10 15:07:14] 2025-10-10 19:06:23,743 | INFO     | transexitcode: 0
[2025-10-10 15:07:14] 2025-10-10 19:06:23,743 | INFO     | exeerrorcode: 0
[2025-10-10 15:07:14] 2025-10-10 19:06:23,743 | INFO     | exeerrordiag: 
[2025-10-10 15:07:14] 2025-10-10 19:06:23,743 | INFO     | exitcode: 0
[2025-10-10 15:07:14] 2025-10-10 19:06:23,743 | INFO     | exitmsg: OK
[2025-10-10 15:07:14] 2025-10-10 19:06:23,743 | INFO     | cpuconsumptiontime: 26345 s
[2025-10-10 15:07:14] 2025-10-10 19:06:23,743 | INFO     | nevents: 400
[2025-10-10 15:07:14] 2025-10-10 19:06:23,743 | INFO     | neventsw: 0
[2025-10-10 15:07:14] 2025-10-10 19:06:23,743 | INFO     | pid: 8102
[2025-10-10 15:07:14] 2025-10-10 19:06:23,744 | INFO     | pgrp: 8102
[2025-10-10 15:07:14] 2025-10-10 19:06:23,744 | INFO     | corecount: 8
[2025-10-10 15:07:14] 2025-10-10 19:06:23,744 | INFO     | event service: False
[2025-10-10 15:07:14] 2025-10-10 19:06:23,744 | INFO     | sizes: {0: 2348819, 3: 2349081, 11: 2349109, 3543: 2383861, 3545: 2383861, 3547: 2384087}
[2025-10-10 15:07:14] 2025-10-10 19:06:23,744 | INFO     | --------------------------------------------------
[2025-10-10 15:07:14] 2025-10-10 19:06:23,744 | INFO     | 
[2025-10-10 15:07:14] 2025-10-10 19:06:23,744 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-10 15:07:14] 2025-10-10 19:06:23,766 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 15:07:14] 2025-10-10 19:06:23,766 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 15:07:14] 2025-10-10 19:06:23,766 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 15:07:14] 2025-10-10 19:06:23,766 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 15:07:14] 2025-10-10 19:06:23,766 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 15:07:14] 2025-10-10 19:06:23,766 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 15:07:14] 2025-10-10 19:06:23,767 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 15:07:14] 2025-10-10 19:06:23,767 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 15:07:14] 2025-10-10 19:06:23,767 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 15:07:14] 2025-10-10 19:06:23,767 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 15:07:14] 2025-10-10 19:06:23,767 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 15:07:14] 2025-10-10 19:06:23,767 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 15:07:14] 2025-10-10 19:06:23,767 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 15:07:14] 2025-10-10 19:06:23,767 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 15:07:14] 2025-10-10 19:06:23,767 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 15:07:14] 2025-10-10 19:06:23,767 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 15:07:14] 2025-10-10 19:06:23,767 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 15:07:14] 2025-10-10 19:06:23,767 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 15:07:14] 2025-10-10 19:06:23,767 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 15:07:14] 2025-10-10 19:06:23,767 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 15:07:14] 2025-10-10 19:06:23,768 | INFO     | job 6828264951 has completed (purged errors)
[2025-10-10 15:07:14] 2025-10-10 19:06:23,768 | INFO     | overall cleanup function is called
[2025-10-10 15:07:14] 2025-10-10 19:06:24,774 | INFO     | --- collectZombieJob: --- 10, [8102]
[2025-10-10 15:07:14] 2025-10-10 19:06:24,774 | INFO     | zombie collector waiting for pid 8102
[2025-10-10 15:07:14] 2025-10-10 19:06:24,774 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 15:07:14] 2025-10-10 19:06:24,775 | INFO     | collected zombie processes
[2025-10-10 15:07:14] 2025-10-10 19:06:24,775 | INFO     | will attempt to kill all subprocesses of pid=8102
[2025-10-10 15:07:14] 2025-10-10 19:06:24,875 | INFO     | process IDs to be killed: [8102] (in reverse order)
[2025-10-10 15:07:14] 2025-10-10 19:06:24,917 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 15:07:14] 2025-10-10 19:06:24,917 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 15:07:14] 2025-10-10 19:06:24,920 | INFO     | did not find any defunct processes belonging to 8102
[2025-10-10 15:07:14] 2025-10-10 19:06:24,922 | INFO     | did not find any defunct processes belonging to 8102
[2025-10-10 15:07:14] 2025-10-10 19:06:24,923 | INFO     | ready for new job
[2025-10-10 15:07:14] 2025-10-10 19:06:24,923 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 15:07:14] 2025-10-10 19:06:24,924 | INFO     | ***************************************
[2025-10-10 15:07:14] 2025-10-10 19:06:24,925 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 15:07:14] 2025-10-10 19:06:24,925 | INFO     | ***************************************
[2025-10-10 15:07:14] 2025-10-10 19:06:24,925 | INFO     | 
[2025-10-10 15:07:14] 2025-10-10 19:06:24,926 | INFO     | architecture information:
[2025-10-10 15:07:14] 2025-10-10 19:06:24,926 | INFO     | executing command: cat /etc/os-release
[2025-10-10 15:07:14] 2025-10-10 19:06:24,940 | INFO     | cat /etc/os-release:
[2025-10-10 15:07:14] NAME="CentOS Linux"
[2025-10-10 15:07:14] VERSION="7 (Core)"
[2025-10-10 15:07:14] ID="centos"
[2025-10-10 15:07:14] ID_LIKE="rhel fedora"
[2025-10-10 15:07:14] VERSION_ID="7"
[2025-10-10 15:07:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 15:07:14] ANSI_COLOR="0;31"
[2025-10-10 15:07:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 15:07:14] HOME_URL="https://www.centos.org/"
[2025-10-10 15:07:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 15:07:14] 
[2025-10-10 15:07:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 15:07:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 15:07:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 15:07:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 15:07:14] 
[2025-10-10 15:07:14] 2025-10-10 19:06:24,941 | INFO     | ***************************************
[2025-10-10 15:07:14] 2025-10-10 19:06:25,444 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-10 15:07:14] 2025-10-10 19:06:25,459 | INFO     | sufficient remaining disk space (32787922944 B)
[2025-10-10 15:07:14] 2025-10-10 19:06:25,459 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 15:07:14] 2025-10-10 19:06:25,459 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 15:07:14] 2025-10-10 19:06:25,460 | INFO     | update_server=False
[2025-10-10 15:07:14] 2025-10-10 19:06:25,460 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 15:07:14] 2025-10-10 19:06:25,460 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 15:07:14] 2025-10-10 19:06:25,460 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 15:07:14] 2025-10-10 19:06:25,541 | INFO     | all data control threads have been joined
[2025-10-10 15:07:14] 2025-10-10 19:06:25,733 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 15:07:14] 2025-10-10 19:06:25,734 | INFO     | aborting loop
[2025-10-10 15:07:14] 2025-10-10 19:06:25,896 | INFO     | all job control threads have been joined
[2025-10-10 15:07:14] 2025-10-10 19:06:26,464 | INFO     | [job] retrieve thread has finished
[2025-10-10 15:07:14] 2025-10-10 19:06:26,466 | INFO     | [job] queue monitor thread has finished
[2025-10-10 15:07:14] 2025-10-10 19:06:26,495 | INFO     | [payload] validate_post thread has finished
[2025-10-10 15:07:14] 2025-10-10 19:06:26,546 | INFO     | [data] control thread has finished
[2025-10-10 15:07:14] 2025-10-10 19:06:26,739 | INFO     | [job] job monitor thread has finished
[2025-10-10 15:07:14] 2025-10-10 19:06:26,769 | INFO     | all payload control threads have been joined
[2025-10-10 15:07:14] 2025-10-10 19:06:26,902 | INFO     | [job] control thread has finished
[2025-10-10 15:07:14] 2025-10-10 19:06:27,032 | INFO     | [payload] failed_post thread has finished
[2025-10-10 15:07:14] 2025-10-10 19:06:27,090 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 15:07:14] 2025-10-10 19:06:27,139 | INFO     | [data] copytool_in thread has finished
[2025-10-10 15:07:14] 2025-10-10 19:06:27,289 | INFO     | [job] validate thread has finished
[2025-10-10 15:07:14] 2025-10-10 19:06:27,360 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 15:07:14] 2025-10-10 19:06:27,461 | INFO     | [data] copytool_out thread has finished
[2025-10-10 15:07:14] 2025-10-10 19:06:27,530 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 15:07:14] 2025-10-10 19:06:27,540 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 15:07:14] 2025-10-10 19:06:27,775 | INFO     | [payload] control thread has finished
[2025-10-10 15:07:14] 2025-10-10 19:06:31,096 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 15:07:14] 2025-10-10 19:06:35,984 | INFO     | job.realtimelogging is not enabled
[2025-10-10 15:07:14] 2025-10-10 19:06:36,989 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 15:07:14] 2025-10-10 19:06:56,417 | INFO     | PID=1517 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-10 15:07:14] 2025-10-10 19:06:56,417 | INFO     | .. there are 2 such processes running
[2025-10-10 15:07:14] 2025-10-10 19:06:56,417 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 15:07:14] 2025-10-10 19:06:56,418 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 15:07:14] 2025-10-10 19:06:56,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 15:07:14] 2025-10-10 19:07:00,322 [wrapper] supervise_pilot (15 min periods counter: 5)
[2025-10-10 15:07:14] 2025-10-10 19:07:08,419 | INFO     | [monitor] cgroup control has ended
[2025-10-10 15:07:14] 2025-10-10 19:07:09,149 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140049525950272)>', '<ExcThread(monitor, started 140048951408384)>']
[2025-10-10 15:07:14] 2025-10-10 19:07:09,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 15:07:14] 2025-10-10 19:07:09,481 | INFO     | [monitor] control thread has ended
[2025-10-10 15:07:14] 2025-10-10 19:07:14,174 | INFO     | all workflow threads have been joined
[2025-10-10 15:07:14] 2025-10-10 19:07:14,174 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 15:07:14] 2025-10-10 19:07:14,175 | INFO     | traces error code: 0
[2025-10-10 15:07:14] 2025-10-10 19:07:14,176 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 15:07:14] 2025-10-10 19:07:14,297 [wrapper] ==== pilot stdout END ====
[2025-10-10 15:07:14] 2025-10-10 19:07:14,300 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 15:07:14] 2025-10-10 19:07:14,303 [wrapper] pilotpid: 1517
[2025-10-10 15:07:14] 2025-10-10 19:07:14,306 [wrapper] Pilot exit status: 0
[2025-10-10 15:07:14] 2025-10-10 19:07:14,317 [wrapper] pandaids: 6828264951
[2025-10-10 15:07:14] 2025-10-10 19:07:14,352 [wrapper] cleanup supervisor_pilot 23391 1518
[2025-10-10 15:07:14] 2025-10-10 19:07:14,355 [wrapper] Test setup, not cleaning
[2025-10-10 15:07:14] 2025-10-10 19:07:14,358 [wrapper] apfmon messages muted
[2025-10-10 15:07:14] 2025-10-10 19:07:14,361 [wrapper] ==== wrapper stdout END ====
[2025-10-10 15:07:14] 2025-10-10 19:07:14,364 [wrapper] ==== wrapper stderr END ====
[2025-10-10 15:07:14]  *** Error codes and diagnostics ***
[2025-10-10 15:07:14]     "exeErrorCode": 0,
[2025-10-10 15:07:14]     "exeErrorDiag": "",
[2025-10-10 15:07:14]     "pilotErrorCode": 0,
[2025-10-10 15:07:14]     "pilotErrorDiag": "",
[2025-10-10 15:07:14]  *** Listing of results directory ***
[2025-10-10 15:07:14] total 415492
[2025-10-10 15:07:14] -rw-r--r-- 1 boincer umatlas    552446 Oct  3 05:44 pilot3.tar.gz
[2025-10-10 15:07:14] -rwx------ 1 boincer umatlas     36292 Oct  3 05:56 runpilot2-wrapper.sh
[2025-10-10 15:07:14] -rw-r--r-- 1 boincer umatlas      5112 Oct  3 05:56 queuedata.json
[2025-10-10 15:07:14] -rw-r--r-- 1 boincer umatlas       100 Oct 10 14:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 15:07:14] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 14:06 run_atlas
[2025-10-10 15:07:14] -rw-r--r-- 1 boincer umatlas       105 Oct 10 14:06 job.xml
[2025-10-10 15:07:14] -rw-r--r-- 2 boincer umatlas 220364101 Oct 10 14:06 EVNT.46376992._000596.pool.root.1
[2025-10-10 15:07:14] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 14:06 start_atlas.sh
[2025-10-10 15:07:14] drwxrwx--x 2 boincer umatlas      4096 Oct 10 14:06 shared
[2025-10-10 15:07:14] -rw-r--r-- 2 boincer umatlas    565609 Oct 10 14:06 input.tar.gz
[2025-10-10 15:07:14] -rw-r--r-- 1 boincer umatlas         0 Oct 10 14:06 boinc_lockfile
[2025-10-10 15:07:14] -rw-r--r-- 1 boincer umatlas      2559 Oct 10 14:06 pandaJob.out
[2025-10-10 15:07:14] -rw------- 1 boincer umatlas    975525 Oct 10 14:07 agis_schedconf.cvmfs.json
[2025-10-10 15:07:14] -rw------- 1 boincer umatlas   1560580 Oct 10 14:07 agis_ddmendpoints.agis.ALL.json
[2025-10-10 15:07:14] drwx------ 4 boincer umatlas      4096 Oct 10 14:07 pilot3
[2025-10-10 15:07:14] -rw-r--r-- 1 boincer umatlas      6134 Oct 10 15:01 init_data.xml
[2025-10-10 15:07:14] -rw------- 1 boincer umatlas 199488171 Oct 10 15:05 HITS.46376994._016566.pool.root.1
[2025-10-10 15:07:14] -rw-r--r-- 1 boincer umatlas       529 Oct 10 15:06 boinc_task_state.xml
[2025-10-10 15:07:14] -rw------- 1 boincer umatlas      1046 Oct 10 15:06 memory_monitor_summary.json
[2025-10-10 15:07:14] -rw------- 1 boincer umatlas    320738 Oct 10 15:06 log.46376994._016566.job.log.tgz.1
[2025-10-10 15:07:14] -rw------- 1 boincer umatlas      7835 Oct 10 15:06 heartbeat.json
[2025-10-10 15:07:14] -rw-r--r-- 1 boincer umatlas        27 Oct 10 15:06 wrapper_checkpoint.txt
[2025-10-10 15:07:14] -rw------- 1 boincer umatlas        95 Oct 10 15:06 pilot_heartbeat.json
[2025-10-10 15:07:14] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 15:07 boinc_mmap_file
[2025-10-10 15:07:14] -rw------- 1 boincer umatlas      4892 Oct 10 15:07 pilotlog.txt
[2025-10-10 15:07:14] -rw------- 1 boincer umatlas    540354 Oct 10 15:07 log.46376994._016566.job.log.1
[2025-10-10 15:07:14] -rw------- 1 boincer umatlas       357 Oct 10 15:07 output.list
[2025-10-10 15:07:14] -rw-r--r-- 1 boincer umatlas       620 Oct 10 15:07 runtime_log
[2025-10-10 15:07:14] -rw------- 1 boincer umatlas    880640 Oct 10 15:07 result.tar.gz
[2025-10-10 15:07:14] -rw-r--r-- 1 boincer umatlas      8703 Oct 10 15:07 runtime_log.err
[2025-10-10 15:07:14] -rw------- 1 boincer umatlas       658 Oct 10 15:07 KKpNDmfhrO8n9Rq4apOajLDm4fhM0noT9bVof3QYDmSIBMDmuNzeQm.diag
[2025-10-10 15:07:14] -rw-r--r-- 1 boincer umatlas     21506 Oct 10 15:07 stderr.txt
[2025-10-10 15:07:14] HITS file was successfully produced:
[2025-10-10 15:07:14] -rw------- 1 boincer umatlas 199488171 Oct 10 15:05 shared/HITS.pool.root.1
[2025-10-10 15:07:14]  *** Contents of shared directory: ***
[2025-10-10 15:07:14] total 411452
[2025-10-10 15:07:14] -rw-r--r-- 2 boincer umatlas 220364101 Oct 10 14:06 ATLAS.root_0
[2025-10-10 15:07:14] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 14:06 start_atlas.sh
[2025-10-10 15:07:14] -rw-r--r-- 2 boincer umatlas    565609 Oct 10 14:06 input.tar.gz
[2025-10-10 15:07:14] -rw------- 1 boincer umatlas 199488171 Oct 10 15:05 HITS.pool.root.1
[2025-10-10 15:07:14] -rw------- 1 boincer umatlas    880640 Oct 10 15:07 result.tar.gz
15:07:16 (30296): run_atlas exited; CPU time 26307.225573
15:07:16 (30296): called boinc_finish(0)

</stderr_txt>
]]>

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