Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:27:50 (3021272): wrapper (7.7.26015): starting
08:27:50 (3021272): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 08:27:50] Arguments: --nthreads 12
[2025-10-11 08:27:50] Threads: 12
[2025-10-11 08:27:50] Checking for CVMFS
[2025-10-11 08:27:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 08:27:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 08:27:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 08:27:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 08:27:50] 2.13.2.0 8705 31473 119472 151575 0 57 39560744 46080000 922 130560 0 52749973 99.997 1014636 784 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-11 08:27:50] CVMFS is ok
[2025-10-11 08:27:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 08:27:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 08:27:50] Further information can be found at the LHC@home message board.
[2025-10-11 08:27:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 08:27:50] Checking for apptainer binary...
[2025-10-11 08:27:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 08:27:50] Running /usr/bin/apptainer --version
[2025-10-11 08:27:50] apptainer version 1.4.2-1.el9
[2025-10-11 08:27:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 08:27:50] gpu01.farm.particle.cz
[2025-10-11 08:27:50] apptainer works
[2025-10-11 08:27:50] Set ATHENA_PROC_NUMBER=12
[2025-10-11 08:27:50] Set ATHENA_CORE_NUMBER=12
[2025-10-11 08:27:50] Starting ATLAS job with PandaID=6837397452
[2025-10-11 08:27:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 09:08:07]  *** The last 200 lines of the pilot log: ***
[2025-10-11 09:08:07]  mtime=0
[2025-10-11 09:08:07]  protocol_id=None
[2025-10-11 09:08:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-11 09:08:07]  replicas=None
[2025-10-11 09:08:07]  scope=mc23_13p6TeV
[2025-10-11 09:08:07]  status=None
[2025-10-11 09:08:07]  status_code=0
[2025-10-11 09:08:07]  storage_token=
[2025-10-11 09:08:07]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6837397452/log.46676269._030532.job.log.tgz.1
[2025-10-11 09:08:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/84/log.46676269._030532.job.log.tgz.1
[2025-10-11 09:08:07]  workdir=None
[2025-10-11 09:08:07] ]
[2025-10-11 09:08:07] 2025-10-11 07:06:57,868 | INFO     | transferring file log.46676269._030532.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6837397452/log.46676269._030532.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-11 09:08:07] 2025-10-11 07:06:57,869 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6837397452/log.46676269._030532.job.log.tgz.1 /var/lib/boinc/slots/2/log.46676269._030532.job
[2025-10-11 09:08:07] 2025-10-11 07:06:57,882 | INFO     | adding to output.list: log.46676269._030532.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/84/log.46676269._030532.job.log.tg
[2025-10-11 09:08:07] 2025-10-11 07:06:57,883 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 09:08:07] 2025-10-11 07:06:57,883 | INFO     | summary of transferred files:
[2025-10-11 09:08:07] 2025-10-11 07:06:57,883 | INFO     |  -- lfn=log.46676269._030532.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 09:08:07] 2025-10-11 07:06:57,883 | INFO     | stage-out finished correctly
[2025-10-11 09:08:07] 2025-10-11 07:06:57,937 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 09:08:07] 2025-10-11 07:06:58,548 | INFO     | time since job start (2340s) is within the limit (172800.0s)
[2025-10-11 09:08:07] 2025-10-11 07:06:58,695 | INFO     | monitor loop #182: job 0:6837397452 is in state 'finished'
[2025-10-11 09:08:07] 2025-10-11 07:06:58,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 09:08:07] 2025-10-11 07:07:00,364 | INFO     | job 6837397452 has state=finished
[2025-10-11 09:08:07] 2025-10-11 07:07:00,364 | INFO     | preparing for final server update for job 6837397452 in state='finished'
[2025-10-11 09:08:07] 2025-10-11 07:07:00,365 | INFO     | this job has now completed (state=finished)
[2025-10-11 09:08:07] 2025-10-11 07:07:00,365 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 09:08:07] 2025-10-11 07:07:00,365 | INFO     | log transfer has been attempted: DONE
[2025-10-11 09:08:07] 2025-10-11 07:07:00,365 | INFO     | job 6837397452 has finished - writing final server update
[2025-10-11 09:08:07] 2025-10-11 07:07:00,365 | INFO     | total number of processed events: 400 (read)
[2025-10-11 09:08:07] 2025-10-11 07:07:00,366 | INFO     | executing command: lscpu
[2025-10-11 09:08:07] 2025-10-11 07:07:00,389 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 09:08:07] 2025-10-11 07:07:00,554 | INFO     | time since job start (2342s) is within the limit (172800.0s)
[2025-10-11 09:08:07] 2025-10-11 07:07:01,198 | INFO     | monitor loop #183: job 0:6837397452 is in state 'finished'
[2025-10-11 09:08:07] 2025-10-11 07:07:01,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 09:08:07] 2025-10-11 07:07:02,560 | INFO     | time since job start (2344s) is within the limit (172800.0s)
[2025-10-11 09:08:07] 2025-10-11 07:07:03,028 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 09:08:07] 2025-10-11 07:07:03,033 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3233.82840625
[2025-10-11 09:08:07] 2025-10-11 07:07:03,038 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6837397452/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 09:08:07] 2025-10-11 07:07:03,039 | INFO     | extracted standard info from prmon json
[2025-10-11 09:08:07] 2025-10-11 07:07:03,039 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 09:08:07] 2025-10-11 07:07:03,039 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 09:08:07] 2025-10-11 07:07:03,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 09:08:07] 2025-10-11 07:07:03,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 09:08:07] 2025-10-11 07:07:03,040 | INFO     | fitting pss+swap vs Time
[2025-10-11 09:08:07] 2025-10-11 07:07:03,041 | INFO     | sum of square deviations: 9228080.0
[2025-10-11 09:08:07] 2025-10-11 07:07:03,041 | INFO     | sum of deviations: -1287652904.0
[2025-10-11 09:08:07] 2025-10-11 07:07:03,041 | INFO     | mean x: 1760165319.0
[2025-10-11 09:08:07] 2025-10-11 07:07:03,041 | INFO     | mean y: 3026122.870967742
[2025-10-11 09:08:07] 2025-10-11 07:07:03,041 | INFO     | -- intersect: 245610127982.67673
[2025-10-11 09:08:07] 2025-10-11 07:07:03,041 | INFO     | intersect: 245610127982.67673
[2025-10-11 09:08:07] 2025-10-11 07:07:03,041 | INFO     | chi2: 0.010496943622016962
[2025-10-11 09:08:07] 2025-10-11 07:07:03,041 | INFO     | -- intersect: 245610127982.67673
[2025-10-11 09:08:07] 2025-10-11 07:07:03,041 | INFO     | current memory leak: -139.54 B/s (using 31 data points, chi2=0.01)
[2025-10-11 09:08:07] 2025-10-11 07:07:03,041 | INFO     | could have reported an average CPU frequency of 3218 MHz (5 samples)
[2025-10-11 09:08:07] 2025-10-11 07:07:03,041 | INFO     | ..............................
[2025-10-11 09:08:07] 2025-10-11 07:07:03,041 | INFO     | . Timing measurements:
[2025-10-11 09:08:07] 2025-10-11 07:07:03,041 | INFO     | . get job = 0 s
[2025-10-11 09:08:07] 2025-10-11 07:07:03,041 | INFO     | . initial setup = 2 s
[2025-10-11 09:08:07] 2025-10-11 07:07:03,041 | INFO     | . payload setup = 3 s
[2025-10-11 09:08:07] 2025-10-11 07:07:03,042 | INFO     | . stage-in = 0 s
[2025-10-11 09:08:07] 2025-10-11 07:07:03,042 | INFO     | . payload execution = 2316 s
[2025-10-11 09:08:07] 2025-10-11 07:07:03,042 | INFO     | . stage-out = 0 s
[2025-10-11 09:08:07] 2025-10-11 07:07:03,042 | INFO     | . log creation = 0 s
[2025-10-11 09:08:07] 2025-10-11 07:07:03,042 | INFO     | ..............................
[2025-10-11 09:08:07] 2025-10-11 07:07:03,094 | INFO     | 
[2025-10-11 09:08:07] 2025-10-11 07:07:03,095 | INFO     | job summary report
[2025-10-11 09:08:07] 2025-10-11 07:07:03,095 | INFO     | --------------------------------------------------
[2025-10-11 09:08:07] 2025-10-11 07:07:03,095 | INFO     | PanDA job id: 6837397452
[2025-10-11 09:08:07] 2025-10-11 07:07:03,095 | INFO     | task id: 46676269
[2025-10-11 09:08:07] 2025-10-11 07:07:03,095 | INFO     | errors: (none)
[2025-10-11 09:08:07] 2025-10-11 07:07:03,095 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 09:08:07] 2025-10-11 07:07:03,095 | INFO     | pilot state: finished 
[2025-10-11 09:08:07] 2025-10-11 07:07:03,095 | INFO     | transexitcode: 0
[2025-10-11 09:08:07] 2025-10-11 07:07:03,095 | INFO     | exeerrorcode: 0
[2025-10-11 09:08:07] 2025-10-11 07:07:03,095 | INFO     | exeerrordiag: 
[2025-10-11 09:08:07] 2025-10-11 07:07:03,095 | INFO     | exitcode: 0
[2025-10-11 09:08:07] 2025-10-11 07:07:03,095 | INFO     | exitmsg: OK
[2025-10-11 09:08:07] 2025-10-11 07:07:03,095 | INFO     | cpuconsumptiontime: 25596 s
[2025-10-11 09:08:07] 2025-10-11 07:07:03,096 | INFO     | nevents: 400
[2025-10-11 09:08:07] 2025-10-11 07:07:03,096 | INFO     | neventsw: 0
[2025-10-11 09:08:07] 2025-10-11 07:07:03,096 | INFO     | pid: 3031816
[2025-10-11 09:08:07] 2025-10-11 07:07:03,096 | INFO     | pgrp: 3031816
[2025-10-11 09:08:07] 2025-10-11 07:07:03,096 | INFO     | corecount: 12
[2025-10-11 09:08:07] 2025-10-11 07:07:03,096 | INFO     | event service: False
[2025-10-11 09:08:07] 2025-10-11 07:07:03,096 | INFO     | sizes: {0: 2348806, 3: 2349068, 11: 2349096, 2324: 2374274, 2326: 2383328, 2331: 2383498}
[2025-10-11 09:08:07] 2025-10-11 07:07:03,096 | INFO     | --------------------------------------------------
[2025-10-11 09:08:07] 2025-10-11 07:07:03,096 | INFO     | 
[2025-10-11 09:08:07] 2025-10-11 07:07:03,096 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-11 09:08:07] 2025-10-11 07:07:03,111 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 09:08:07] 2025-10-11 07:07:03,111 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 09:08:07] 2025-10-11 07:07:03,111 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 09:08:07] 2025-10-11 07:07:03,112 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 09:08:07] 2025-10-11 07:07:03,112 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 09:08:07] 2025-10-11 07:07:03,112 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 09:08:07] 2025-10-11 07:07:03,112 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 09:08:07] 2025-10-11 07:07:03,112 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 09:08:07] 2025-10-11 07:07:03,112 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 09:08:07] 2025-10-11 07:07:03,112 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 09:08:07] 2025-10-11 07:07:03,112 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 09:08:07] 2025-10-11 07:07:03,112 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 09:08:07] 2025-10-11 07:07:03,112 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 09:08:07] 2025-10-11 07:07:03,112 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 09:08:07] 2025-10-11 07:07:03,112 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 09:08:07] 2025-10-11 07:07:03,112 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 09:08:07] 2025-10-11 07:07:03,113 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 09:08:07] 2025-10-11 07:07:03,113 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 09:08:07] 2025-10-11 07:07:03,113 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 09:08:07] 2025-10-11 07:07:03,113 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 09:08:07] 2025-10-11 07:07:03,113 | INFO     | job 6837397452 has completed (purged errors)
[2025-10-11 09:08:07] 2025-10-11 07:07:03,113 | INFO     | overall cleanup function is called
[2025-10-11 09:08:07] 2025-10-11 07:07:04,121 | INFO     | --- collectZombieJob: --- 10, [3031816]
[2025-10-11 09:08:07] 2025-10-11 07:07:04,121 | INFO     | zombie collector waiting for pid 3031816
[2025-10-11 09:08:07] 2025-10-11 07:07:04,121 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 09:08:07] 2025-10-11 07:07:04,121 | INFO     | collected zombie processes
[2025-10-11 09:08:07] 2025-10-11 07:07:04,122 | INFO     | will attempt to kill all subprocesses of pid=3031816
[2025-10-11 09:08:07] 2025-10-11 07:07:04,211 | INFO     | process IDs to be killed: [3031816] (in reverse order)
[2025-10-11 09:08:07] 2025-10-11 07:07:04,249 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 09:08:07] 2025-10-11 07:07:04,249 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 09:08:07] 2025-10-11 07:07:04,252 | INFO     | did not find any defunct processes belonging to 3031816
[2025-10-11 09:08:07] 2025-10-11 07:07:04,255 | INFO     | did not find any defunct processes belonging to 3031816
[2025-10-11 09:08:07] 2025-10-11 07:07:04,255 | INFO     | ready for new job
[2025-10-11 09:08:07] 2025-10-11 07:07:04,255 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 09:08:07] 2025-10-11 07:07:04,256 | INFO     | ***************************************
[2025-10-11 09:08:07] 2025-10-11 07:07:04,256 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 09:08:07] 2025-10-11 07:07:04,256 | INFO     | ***************************************
[2025-10-11 09:08:07] 2025-10-11 07:07:04,256 | INFO     | 
[2025-10-11 09:08:07] 2025-10-11 07:07:04,257 | INFO     | architecture information:
[2025-10-11 09:08:07] 2025-10-11 07:07:04,258 | INFO     | executing command: cat /etc/os-release
[2025-10-11 09:08:07] 2025-10-11 07:07:04,269 | INFO     | cat /etc/os-release:
[2025-10-11 09:08:07] NAME="CentOS Linux"
[2025-10-11 09:08:07] VERSION="7 (Core)"
[2025-10-11 09:08:07] ID="centos"
[2025-10-11 09:08:07] ID_LIKE="rhel fedora"
[2025-10-11 09:08:07] VERSION_ID="7"
[2025-10-11 09:08:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 09:08:07] ANSI_COLOR="0;31"
[2025-10-11 09:08:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 09:08:07] HOME_URL="https://www.centos.org/"
[2025-10-11 09:08:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 09:08:07] 
[2025-10-11 09:08:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 09:08:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 09:08:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 09:08:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 09:08:07] 
[2025-10-11 09:08:07] 2025-10-11 07:07:04,270 | INFO     | ***************************************
[2025-10-11 09:08:07] 2025-10-11 07:07:04,772 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-11 09:08:07] 2025-10-11 07:07:04,785 | INFO     | sufficient remaining disk space (51842646016 B)
[2025-10-11 09:08:07] 2025-10-11 07:07:04,785 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 09:08:07] 2025-10-11 07:07:04,785 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 09:08:07] 2025-10-11 07:07:04,785 | INFO     | update_server=False
[2025-10-11 09:08:07] 2025-10-11 07:07:04,785 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 09:08:07] 2025-10-11 07:07:04,786 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 09:08:07] 2025-10-11 07:07:04,786 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:08:07] 2025-10-11 07:07:04,786 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:08:07] 2025-10-11 07:07:04,786 | INFO     | aborting loop
[2025-10-11 09:08:07] 2025-10-11 07:07:05,310 | INFO     | all data control threads have been joined
[2025-10-11 09:08:07] 2025-10-11 07:07:05,517 | INFO     | all job control threads have been joined
[2025-10-11 09:08:07] 2025-10-11 07:07:05,791 | INFO     | [job] retrieve thread has finished
[2025-10-11 09:08:07] 2025-10-11 07:07:05,792 | INFO     | [job] job monitor thread has finished
[2025-10-11 09:08:07] 2025-10-11 07:07:05,792 | INFO     | [job] queue monitor thread has finished
[2025-10-11 09:08:07] 2025-10-11 07:07:05,801 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 09:08:07] 2025-10-11 07:07:05,905 | INFO     | all payload control threads have been joined
[2025-10-11 09:08:07] 2025-10-11 07:07:05,947 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 09:08:07] 2025-10-11 07:07:06,244 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 09:08:07] 2025-10-11 07:07:06,288 | INFO     | [payload] failed_post thread has finished
[2025-10-11 09:08:07] 2025-10-11 07:07:06,316 | INFO     | [data] control thread has finished
[2025-10-11 09:08:07] 2025-10-11 07:07:06,522 | INFO     | [job] control thread has finished
[2025-10-11 09:08:07] 2025-10-11 07:07:06,910 | INFO     | [payload] control thread has finished
[2025-10-11 09:08:07] 2025-10-11 07:07:06,912 | INFO     | [payload] validate_post thread has finished
[2025-10-11 09:08:07] 2025-10-11 07:07:07,032 | INFO     | [job] validate thread has finished
[2025-10-11 09:08:07] 2025-10-11 07:07:07,039 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 09:08:07] 2025-10-11 07:07:07,104 | INFO     | [data] copytool_in thread has finished
[2025-10-11 09:08:07] 2025-10-11 07:07:07,286 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 09:08:07] 2025-10-11 07:07:07,953 | INFO     | [data] copytool_out thread has finished
[2025-10-11 09:08:07] 2025-10-11 07:07:08,792 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 09:08:07] 2025-10-11 07:07:35,783 | INFO     | PID=3025131 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 09:08:07] 2025-10-11 07:07:35,784 | INFO     | .. there are 2 such processes running
[2025-10-11 09:08:07] 2025-10-11 07:07:35,784 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 09:08:07] 2025-10-11 07:07:35,784 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 09:08:07] 2025-10-11 07:07:35,784 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 09:08:07] 2025-10-11 07:08:01,775 | INFO     | [monitor] cgroup control has ended
[2025-10-11 09:08:07] 2025-10-11 07:08:02,211 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140180505839424)>', '<ExcThread(monitor, started 140179729798912)>']
[2025-10-11 09:08:07] 2025-10-11 07:08:02,920 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 09:08:07] 2025-10-11 07:08:02,920 | INFO     | [monitor] control thread has ended
[2025-10-11 09:08:07] 2025-10-11 07:08:07,237 | INFO     | all workflow threads have been joined
[2025-10-11 09:08:07] 2025-10-11 07:08:07,237 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 09:08:07] 2025-10-11 07:08:07,237 | INFO     | traces error code: 0
[2025-10-11 09:08:07] 2025-10-11 07:08:07,237 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 09:08:07] 2025-10-11 07:08:07,300 [wrapper] ==== pilot stdout END ====
[2025-10-11 09:08:07] 2025-10-11 07:08:07,302 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 09:08:07] 2025-10-11 07:08:07,304 [wrapper] pilotpid: 3025131
[2025-10-11 09:08:07] 2025-10-11 07:08:07,306 [wrapper] Pilot exit status: 0
[2025-10-11 09:08:07] 2025-10-11 07:08:07,313 [wrapper] pandaids: 6837397452
[2025-10-11 09:08:07] 2025-10-11 07:08:07,340 [wrapper] cleanup supervisor_pilot 3073213 3025132
[2025-10-11 09:08:07] 2025-10-11 07:08:07,342 [wrapper] Test setup, not cleaning
[2025-10-11 09:08:07] 2025-10-11 07:08:07,344 [wrapper] apfmon messages muted
[2025-10-11 09:08:07] 2025-10-11 07:08:07,346 [wrapper] ==== wrapper stdout END ====
[2025-10-11 09:08:07] 2025-10-11 07:08:07,348 [wrapper] ==== wrapper stderr END ====
[2025-10-11 09:08:07]  *** Error codes and diagnostics ***
[2025-10-11 09:08:07]     "exeErrorCode": 0,
[2025-10-11 09:08:07]     "exeErrorDiag": "",
[2025-10-11 09:08:07]     "pilotErrorCode": 0,
[2025-10-11 09:08:07]     "pilotErrorDiag": "",
[2025-10-11 09:08:07]  *** Listing of results directory ***
[2025-10-11 09:08:07] total 415628
[2025-10-11 09:08:07] -rw-r--r-- 1 boinc boinc    557409 Oct 10 04:00 pilot3.tar.gz
[2025-10-11 09:08:07] -rw-r--r-- 1 boinc boinc      5112 Oct 10 04:18 queuedata.json
[2025-10-11 09:08:07] -rwx------ 1 boinc boinc     36292 Oct 10 04:18 runpilot2-wrapper.sh
[2025-10-11 09:08:07] -rw-r--r-- 1 boinc boinc       100 Oct 11 08:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 09:08:07] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 08:27 run_atlas
[2025-10-11 09:08:07] -rw-r--r-- 1 boinc boinc       105 Oct 11 08:27 job.xml
[2025-10-11 09:08:07] -rw-r--r-- 1 boinc boinc      9445 Oct 11 08:27 init_data.xml
[2025-10-11 09:08:07] -rw-r--r-- 2 boinc boinc 224285180 Oct 11 08:27 EVNT.46676267._001245.pool.root.1
[2025-10-11 09:08:07] -rw-r--r-- 2 boinc boinc     15120 Oct 11 08:27 start_atlas.sh
[2025-10-11 09:08:07] drwxrwx--x 2 boinc boinc      4096 Oct 11 08:27 shared
[2025-10-11 09:08:07] -rw-r--r-- 2 boinc boinc    569678 Oct 11 08:27 input.tar.gz
[2025-10-11 09:08:07] -rw-r--r-- 1 boinc boinc         0 Oct 11 08:27 boinc_lockfile
[2025-10-11 09:08:07] -rw-r--r-- 1 boinc boinc      2549 Oct 11 08:27 pandaJob.out
[2025-10-11 09:08:07] -rw------- 1 boinc boinc    975525 Oct 11 08:27 agis_schedconf.cvmfs.json
[2025-10-11 09:08:07] -rw------- 1 boinc boinc   1560580 Oct 11 08:27 agis_ddmendpoints.agis.ALL.json
[2025-10-11 09:08:07] drwx------ 5 boinc boinc      4096 Oct 11 08:27 pilot3
[2025-10-11 09:08:07] -rw-r--r-- 1 boinc boinc       529 Oct 11 09:06 boinc_task_state.xml
[2025-10-11 09:08:07] -rw------- 1 boinc boinc 195933342 Oct 11 09:06 HITS.46676269._030532.pool.root.1
[2025-10-11 09:08:07] -rw------- 1 boinc boinc      1017 Oct 11 09:06 memory_monitor_summary.json
[2025-10-11 09:08:07] -rw------- 1 boinc boinc    358751 Oct 11 09:06 log.46676269._030532.job.log.tgz.1
[2025-10-11 09:08:07] -rw------- 1 boinc boinc      7775 Oct 11 09:07 heartbeat.json
[2025-10-11 09:08:07] -rw------- 1 boinc boinc        95 Oct 11 09:07 pilot_heartbeat.json
[2025-10-11 09:08:07] -rw-r--r-- 1 boinc boinc      8192 Oct 11 09:08 boinc_mmap_file
[2025-10-11 09:08:07] -rw-r--r-- 1 boinc boinc        27 Oct 11 09:08 wrapper_checkpoint.txt
[2025-10-11 09:08:07] -rw------- 1 boinc boinc      4823 Oct 11 09:08 pilotlog.txt
[2025-10-11 09:08:07] -rw------- 1 boinc boinc    377176 Oct 11 09:08 log.46676269._030532.job.log.1
[2025-10-11 09:08:07] -rw------- 1 boinc boinc       357 Oct 11 09:08 output.list
[2025-10-11 09:08:07] -rw-r--r-- 1 boinc boinc       620 Oct 11 09:08 runtime_log
[2025-10-11 09:08:07] -rw------- 1 boinc boinc    757760 Oct 11 09:08 result.tar.gz
[2025-10-11 09:08:07] -rw-r--r-- 1 boinc boinc      8740 Oct 11 09:08 runtime_log.err
[2025-10-11 09:08:07] -rw------- 1 boinc boinc       658 Oct 11 09:08 nRiLDmftHR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDml2bNDmvwXNKn.diag
[2025-10-11 09:08:07] -rw-r--r-- 1 boinc boinc     21681 Oct 11 09:08 stderr.txt
[2025-10-11 09:08:07] HITS file was successfully produced:
[2025-10-11 09:08:07] -rw------- 1 boinc boinc 195933342 Oct 11 09:06 shared/HITS.pool.root.1
[2025-10-11 09:08:07]  *** Contents of shared directory: ***
[2025-10-11 09:08:07] total 411696
[2025-10-11 09:08:07] -rw-r--r-- 2 boinc boinc 224285180 Oct 11 08:27 ATLAS.root_0
[2025-10-11 09:08:07] -rw-r--r-- 2 boinc boinc     15120 Oct 11 08:27 start_atlas.sh
[2025-10-11 09:08:07] -rw-r--r-- 2 boinc boinc    569678 Oct 11 08:27 input.tar.gz
[2025-10-11 09:08:07] -rw------- 1 boinc boinc 195933342 Oct 11 09:06 HITS.pool.root.1
[2025-10-11 09:08:07] -rw------- 1 boinc boinc    757760 Oct 11 09:08 result.tar.gz
09:08:08 (3021272): run_atlas exited; CPU time 25608.644526
09:08:08 (3021272): called boinc_finish(0)

</stderr_txt>
]]>

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