Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:53:27 (16813): wrapper (7.7.26015): starting
13:53:27 (16813): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 13:53:27] Arguments: --nthreads 12
[2025-10-10 13:53:27] Threads: 12
[2025-10-10 13:53:27] Checking for CVMFS
[2025-10-10 13:53:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 13:53:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 13:53:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 13:53:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 13:53:28] 2.11.2.0 3035 220281 98916 151556 1 57 12525099 20275200 1 130560 3 105445948 99.984 13564661 12557 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 13:53:28] CVMFS is ok
[2025-10-10 13:53:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 13:53:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 13:53:28] Further information can be found at the LHC@home message board.
[2025-10-10 13:53:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 13:53:28] Checking for apptainer binary...
[2025-10-10 13:53:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 13:53:28] Running /usr/bin/apptainer --version
[2025-10-10 13:53:28] apptainer version 1.3.2-1.el7
[2025-10-10 13:53:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 13:53:29] c-205-31.aglt2.org
[2025-10-10 13:53:29] apptainer works
[2025-10-10 13:53:29] Set ATHENA_PROC_NUMBER=12
[2025-10-10 13:53:29] Set ATHENA_CORE_NUMBER=12
[2025-10-10 13:53:29] Starting ATLAS job with PandaID=6836335058
[2025-10-10 13:53:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 15:06:19]  *** The last 200 lines of the pilot log: ***
[2025-10-10 15:06:19]  is_tar=False
[2025-10-10 15:06:19]  lfn=log.46676269._007462.job.log.tgz.1
[2025-10-10 15:06:19]  mtime=0
[2025-10-10 15:06:19]  protocol_id=None
[2025-10-10 15:06:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-10 15:06:19]  replicas=None
[2025-10-10 15:06:19]  scope=mc23_13p6TeV
[2025-10-10 15:06:19]  status=None
[2025-10-10 15:06:19]  status_code=0
[2025-10-10 15:06:19]  storage_token=
[2025-10-10 15:06:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6836335058/log.46676269._007462.job.log.tgz.1
[2025-10-10 15:06:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/4b/log.46676269._007462.job.log.tgz.1
[2025-10-10 15:06:19]  workdir=None
[2025-10-10 15:06:19] ]
[2025-10-10 15:06:19] 2025-10-10 19:05:42,951 | INFO     | transferring file log.46676269._007462.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6836335058/log.46676269._007462.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-10 15:06:19] 2025-10-10 19:05:42,951 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6836335058/log.46676269._007462.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._007462.job
[2025-10-10 15:06:19] 2025-10-10 19:05:42,973 | INFO     | adding to output.list: log.46676269._007462.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/4b/log.46676269._007462.job.log.tg
[2025-10-10 15:06:19] 2025-10-10 19:05:42,974 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 15:06:19] 2025-10-10 19:05:42,974 | INFO     | summary of transferred files:
[2025-10-10 15:06:19] 2025-10-10 19:05:42,974 | INFO     |  -- lfn=log.46676269._007462.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 15:06:19] 2025-10-10 19:05:42,975 | INFO     | stage-out finished correctly
[2025-10-10 15:06:19] 2025-10-10 19:05:43,010 | INFO     | monitor loop #322: job 0:6836335058 is in state 'finished'
[2025-10-10 15:06:19] 2025-10-10 19:05:43,011 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 15:06:19] 2025-10-10 19:05:43,062 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 15:06:19] 2025-10-10 19:05:43,143 | INFO     | job 6836335058 has state=finished
[2025-10-10 15:06:19] 2025-10-10 19:05:43,143 | INFO     | preparing for final server update for job 6836335058 in state='finished'
[2025-10-10 15:06:19] 2025-10-10 19:05:43,150 | INFO     | this job has now completed (state=finished)
[2025-10-10 15:06:19] 2025-10-10 19:05:43,150 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 15:06:19] 2025-10-10 19:05:43,150 | INFO     | log transfer has been attempted: DONE
[2025-10-10 15:06:19] 2025-10-10 19:05:43,151 | INFO     | job 6836335058 has finished - writing final server update
[2025-10-10 15:06:19] 2025-10-10 19:05:43,151 | INFO     | total number of processed events: 400 (read)
[2025-10-10 15:06:19] 2025-10-10 19:05:43,152 | INFO     | executing command: lscpu
[2025-10-10 15:06:19] 2025-10-10 19:05:43,178 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 15:06:19] 2025-10-10 19:05:44,114 | INFO     | time since job start (4320s) is within the limit (172800.0s)
[2025-10-10 15:06:19] 2025-10-10 19:05:45,514 | INFO     | monitor loop #323: job 0:6836335058 is in state 'finished'
[2025-10-10 15:06:19] 2025-10-10 19:05:45,514 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 15:06:19] 2025-10-10 19:05:46,120 | INFO     | time since job start (4322s) is within the limit (172800.0s)
[2025-10-10 15:06:19] 2025-10-10 19:05:47,898 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-10 15:06:19] 2025-10-10 19:05:47,902 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-10 15:06:19] 2025-10-10 19:05:47,905 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6836335058/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 15:06:19] 2025-10-10 19:05:47,905 | INFO     | extracted standard info from prmon json
[2025-10-10 15:06:19] 2025-10-10 19:05:47,905 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 15:06:19] 2025-10-10 19:05:47,906 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 15:06:19] 2025-10-10 19:05:47,906 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 15:06:19] 2025-10-10 19:05:47,906 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 15:06:19] 2025-10-10 19:05:47,907 | INFO     | fitting pss+swap vs Time
[2025-10-10 15:06:19] 2025-10-10 19:05:47,908 | INFO     | sum of square deviations: 81266640.0
[2025-10-10 15:06:19] 2025-10-10 19:05:47,908 | INFO     | sum of deviations: -1909242416.0
[2025-10-10 15:06:19] 2025-10-10 19:05:47,908 | INFO     | mean x: 1760121079.5
[2025-10-10 15:06:19] 2025-10-10 19:05:47,908 | INFO     | mean y: 2695584.25
[2025-10-10 15:06:19] 2025-10-10 19:05:47,908 | INFO     | -- intersect: 41354199993.403725
[2025-10-10 15:06:19] 2025-10-10 19:05:47,908 | INFO     | intersect: 41354199993.403725
[2025-10-10 15:06:19] 2025-10-10 19:05:47,909 | INFO     | chi2: 0.05405857520633915
[2025-10-10 15:06:19] 2025-10-10 19:05:47,909 | INFO     | -- intersect: 41354199993.403725
[2025-10-10 15:06:19] 2025-10-10 19:05:47,909 | INFO     | current memory leak: -23.49 B/s (using 64 data points, chi2=0.05)
[2025-10-10 15:06:19] 2025-10-10 19:05:47,909 | INFO     | could have reported an average CPU frequency of 2037 MHz (6 samples)
[2025-10-10 15:06:19] 2025-10-10 19:05:47,909 | INFO     | ..............................
[2025-10-10 15:06:19] 2025-10-10 19:05:47,909 | INFO     | . Timing measurements:
[2025-10-10 15:06:19] 2025-10-10 19:05:47,910 | INFO     | . get job = 0 s
[2025-10-10 15:06:19] 2025-10-10 19:05:47,910 | INFO     | . initial setup = 2 s
[2025-10-10 15:06:19] 2025-10-10 19:05:47,910 | INFO     | . payload setup = 7 s
[2025-10-10 15:06:19] 2025-10-10 19:05:47,910 | INFO     | . stage-in = 0 s
[2025-10-10 15:06:19] 2025-10-10 19:05:47,910 | INFO     | . payload execution = 4289 s
[2025-10-10 15:06:19] 2025-10-10 19:05:47,910 | INFO     | . stage-out = 0 s
[2025-10-10 15:06:19] 2025-10-10 19:05:47,910 | INFO     | . log creation = 0 s
[2025-10-10 15:06:19] 2025-10-10 19:05:47,910 | INFO     | ..............................
[2025-10-10 15:06:19] 2025-10-10 19:05:47,994 | INFO     | 
[2025-10-10 15:06:19] 2025-10-10 19:05:47,994 | INFO     | job summary report
[2025-10-10 15:06:19] 2025-10-10 19:05:47,994 | INFO     | --------------------------------------------------
[2025-10-10 15:06:19] 2025-10-10 19:05:47,994 | INFO     | PanDA job id: 6836335058
[2025-10-10 15:06:19] 2025-10-10 19:05:47,995 | INFO     | task id: 46676269
[2025-10-10 15:06:19] 2025-10-10 19:05:47,995 | INFO     | errors: (none)
[2025-10-10 15:06:19] 2025-10-10 19:05:47,995 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 15:06:19] 2025-10-10 19:05:47,995 | INFO     | pilot state: finished 
[2025-10-10 15:06:19] 2025-10-10 19:05:47,995 | INFO     | transexitcode: 0
[2025-10-10 15:06:19] 2025-10-10 19:05:47,995 | INFO     | exeerrorcode: 0
[2025-10-10 15:06:19] 2025-10-10 19:05:47,996 | INFO     | exeerrordiag: 
[2025-10-10 15:06:19] 2025-10-10 19:05:47,996 | INFO     | exitcode: 0
[2025-10-10 15:06:19] 2025-10-10 19:05:47,996 | INFO     | exitmsg: OK
[2025-10-10 15:06:19] 2025-10-10 19:05:47,996 | INFO     | cpuconsumptiontime: 46271 s
[2025-10-10 15:06:19] 2025-10-10 19:05:47,996 | INFO     | nevents: 400
[2025-10-10 15:06:19] 2025-10-10 19:05:47,996 | INFO     | neventsw: 0
[2025-10-10 15:06:19] 2025-10-10 19:05:47,996 | INFO     | pid: 26902
[2025-10-10 15:06:19] 2025-10-10 19:05:47,997 | INFO     | pgrp: 26902
[2025-10-10 15:06:19] 2025-10-10 19:05:47,997 | INFO     | corecount: 12
[2025-10-10 15:06:19] 2025-10-10 19:05:47,997 | INFO     | event service: False
[2025-10-10 15:06:19] 2025-10-10 19:05:47,997 | INFO     | sizes: {0: 2348852, 1: 2348852, 5: 2349142, 11: 2349198, 4300: 2375244, 4302: 2384426, 4307: 2384564}
[2025-10-10 15:06:19] 2025-10-10 19:05:47,997 | INFO     | --------------------------------------------------
[2025-10-10 15:06:19] 2025-10-10 19:05:47,997 | INFO     | 
[2025-10-10 15:06:19] 2025-10-10 19:05:47,998 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 15:06:19] 2025-10-10 19:05:48,022 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 15:06:19] 2025-10-10 19:05:48,023 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 15:06:19] 2025-10-10 19:05:48,023 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 15:06:19] 2025-10-10 19:05:48,023 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 15:06:19] 2025-10-10 19:05:48,023 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 15:06:19] 2025-10-10 19:05:48,024 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 15:06:19] 2025-10-10 19:05:48,024 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 15:06:19] 2025-10-10 19:05:48,024 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 15:06:19] 2025-10-10 19:05:48,024 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 15:06:19] 2025-10-10 19:05:48,024 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 15:06:19] 2025-10-10 19:05:48,024 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 15:06:19] 2025-10-10 19:05:48,025 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 15:06:19] 2025-10-10 19:05:48,025 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 15:06:19] 2025-10-10 19:05:48,025 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 15:06:19] 2025-10-10 19:05:48,025 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 15:06:19] 2025-10-10 19:05:48,025 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 15:06:19] 2025-10-10 19:05:48,025 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 15:06:19] 2025-10-10 19:05:48,026 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 15:06:19] 2025-10-10 19:05:48,026 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 15:06:19] 2025-10-10 19:05:48,026 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 15:06:19] 2025-10-10 19:05:48,026 | INFO     | job 6836335058 has completed (purged errors)
[2025-10-10 15:06:19] 2025-10-10 19:05:48,026 | INFO     | overall cleanup function is called
[2025-10-10 15:06:19] 2025-10-10 19:05:49,034 | INFO     | --- collectZombieJob: --- 10, [26902]
[2025-10-10 15:06:19] 2025-10-10 19:05:49,034 | INFO     | zombie collector waiting for pid 26902
[2025-10-10 15:06:19] 2025-10-10 19:05:49,035 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 15:06:19] 2025-10-10 19:05:49,035 | INFO     | collected zombie processes
[2025-10-10 15:06:19] 2025-10-10 19:05:49,035 | INFO     | will attempt to kill all subprocesses of pid=26902
[2025-10-10 15:06:19] 2025-10-10 19:05:49,128 | INFO     | process IDs to be killed: [26902] (in reverse order)
[2025-10-10 15:06:19] 2025-10-10 19:05:49,181 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 15:06:19] 2025-10-10 19:05:49,181 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 15:06:19] 2025-10-10 19:05:49,184 | INFO     | did not find any defunct processes belonging to 26902
[2025-10-10 15:06:19] 2025-10-10 19:05:49,187 | INFO     | did not find any defunct processes belonging to 26902
[2025-10-10 15:06:19] 2025-10-10 19:05:49,187 | INFO     | ready for new job
[2025-10-10 15:06:19] 2025-10-10 19:05:49,187 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 15:06:19] 2025-10-10 19:05:49,188 | INFO     | ***************************************
[2025-10-10 15:06:19] 2025-10-10 19:05:49,188 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 15:06:19] 2025-10-10 19:05:49,188 | INFO     | ***************************************
[2025-10-10 15:06:19] 2025-10-10 19:05:49,188 | INFO     | 
[2025-10-10 15:06:19] 2025-10-10 19:05:49,189 | INFO     | architecture information:
[2025-10-10 15:06:19] 2025-10-10 19:05:49,190 | INFO     | executing command: cat /etc/os-release
[2025-10-10 15:06:19] 2025-10-10 19:05:49,205 | INFO     | cat /etc/os-release:
[2025-10-10 15:06:19] NAME="CentOS Linux"
[2025-10-10 15:06:19] VERSION="7 (Core)"
[2025-10-10 15:06:19] ID="centos"
[2025-10-10 15:06:19] ID_LIKE="rhel fedora"
[2025-10-10 15:06:19] VERSION_ID="7"
[2025-10-10 15:06:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 15:06:19] ANSI_COLOR="0;31"
[2025-10-10 15:06:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 15:06:19] HOME_URL="https://www.centos.org/"
[2025-10-10 15:06:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 15:06:19] 
[2025-10-10 15:06:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 15:06:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 15:06:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 15:06:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 15:06:19] 
[2025-10-10 15:06:19] 2025-10-10 19:05:49,205 | INFO     | ***************************************
[2025-10-10 15:06:19] 2025-10-10 19:05:49,708 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 15:06:19] 2025-10-10 19:05:49,723 | INFO     | sufficient remaining disk space (29371662336 B)
[2025-10-10 15:06:19] 2025-10-10 19:05:49,724 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 15:06:19] 2025-10-10 19:05:49,724 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 15:06:19] 2025-10-10 19:05:49,724 | INFO     | update_server=False
[2025-10-10 15:06:19] 2025-10-10 19:05:49,724 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 15:06:19] 2025-10-10 19:05:49,725 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 15:06:19] 2025-10-10 19:05:49,725 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 15:06:19] 2025-10-10 19:05:49,725 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 15:06:19] 2025-10-10 19:05:49,726 | INFO     | aborting loop
[2025-10-10 15:06:19] 2025-10-10 19:05:50,277 | INFO     | all data control threads have been joined
[2025-10-10 15:06:19] 2025-10-10 19:05:50,601 | INFO     | all job control threads have been joined
[2025-10-10 15:06:19] 2025-10-10 19:05:50,728 | INFO     | [job] job monitor thread has finished
[2025-10-10 15:06:19] 2025-10-10 19:05:50,730 | INFO     | [job] retrieve thread has finished
[2025-10-10 15:06:19] 2025-10-10 19:05:50,730 | INFO     | [job] queue monitor thread has finished
[2025-10-10 15:06:19] 2025-10-10 19:05:50,803 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 15:06:19] 2025-10-10 19:05:50,995 | INFO     | [data] copytool_in thread has finished
[2025-10-10 15:06:19] 2025-10-10 19:05:51,072 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 15:06:19] 2025-10-10 19:05:51,208 | INFO     | [monitor] cgroup control has ended
[2025-10-10 15:06:19] 2025-10-10 19:05:51,230 | INFO     | all payload control threads have been joined
[2025-10-10 15:06:19] 2025-10-10 19:05:51,282 | INFO     | [data] control thread has finished
[2025-10-10 15:06:19] 2025-10-10 19:05:51,360 | INFO     | [payload] validate_post thread has finished
[2025-10-10 15:06:19] 2025-10-10 19:05:51,452 | INFO     | [job] validate thread has finished
[2025-10-10 15:06:19] 2025-10-10 19:05:51,606 | INFO     | [job] control thread has finished
[2025-10-10 15:06:19] 2025-10-10 19:05:51,985 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 15:06:19] 2025-10-10 19:05:51,990 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 15:06:19] 2025-10-10 19:05:52,156 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 15:06:19] 2025-10-10 19:05:52,236 | INFO     | [payload] control thread has finished
[2025-10-10 15:06:19] 2025-10-10 19:05:52,293 | INFO     | [payload] failed_post thread has finished
[2025-10-10 15:06:19] 2025-10-10 19:05:53,077 | INFO     | [data] copytool_out thread has finished
[2025-10-10 15:06:19] 2025-10-10 19:05:53,732 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 15:06:19] 2025-10-10 19:05:54,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139870494127936)>', '<ExcThread(monitor, started 139869770741504)>']
[2025-10-10 15:06:19] 2025-10-10 19:05:59,404 | INFO     | all workflow threads have been joined
[2025-10-10 15:06:19] 2025-10-10 19:05:59,411 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 15:06:19] 2025-10-10 19:05:59,412 | INFO     | traces error code: 0
[2025-10-10 15:06:19] 2025-10-10 19:05:59,412 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 15:06:19] 2025-10-10 19:06:19,324 | INFO     | PID=20486 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 15:06:19] 2025-10-10 19:06:19,325 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 15:06:19] 2025-10-10 19:06:19,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 15:06:19] 2025-10-10 19:06:19,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 15:06:19] 2025-10-10 19:06:19,325 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 15:06:19] 2025-10-10 19:06:19,325 | INFO     | [monitor] control thread has ended
[2025-10-10 15:06:19] 2025-10-10 19:06:19,422 [wrapper] ==== pilot stdout END ====
[2025-10-10 15:06:19] 2025-10-10 19:06:19,426 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 15:06:19] 2025-10-10 19:06:19,430 [wrapper] pilotpid: 20486
[2025-10-10 15:06:19] 2025-10-10 19:06:19,434 [wrapper] Pilot exit status: 0
[2025-10-10 15:06:19] 2025-10-10 19:06:19,450 [wrapper] pandaids: 6836335058
[2025-10-10 15:06:19] 2025-10-10 19:06:19,493 [wrapper] cleanup supervisor_pilot  5807 20487
[2025-10-10 15:06:19] 2025-10-10 19:06:19,496 [wrapper] Test setup, not cleaning
[2025-10-10 15:06:19] 2025-10-10 19:06:19,500 [wrapper] apfmon messages muted
[2025-10-10 15:06:19] 2025-10-10 19:06:19,504 [wrapper] ==== wrapper stdout END ====
[2025-10-10 15:06:19] 2025-10-10 19:06:19,508 [wrapper] ==== wrapper stderr END ====
[2025-10-10 15:06:19]  *** Error codes and diagnostics ***
[2025-10-10 15:06:19]     "exeErrorCode": 0,
[2025-10-10 15:06:19]     "exeErrorDiag": "",
[2025-10-10 15:06:19]     "pilotErrorCode": 0,
[2025-10-10 15:06:19]     "pilotErrorDiag": "",
[2025-10-10 15:06:19]  *** Listing of results directory ***
[2025-10-10 15:06:19] total 406804
[2025-10-10 15:06:19] -rw-r--r-- 1 boincer umatlas    557409 Oct  8 14:44 pilot3.tar.gz
[2025-10-10 15:06:19] -rwx------ 1 boincer umatlas     36292 Oct  8 14:48 runpilot2-wrapper.sh
[2025-10-10 15:06:19] -rw-r--r-- 1 boincer umatlas      5112 Oct  8 14:49 queuedata.json
[2025-10-10 15:06:19] -rw-r--r-- 1 boincer umatlas       100 Oct 10 13:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 15:06:19] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 13:53 run_atlas
[2025-10-10 15:06:19] -rw-r--r-- 1 boincer umatlas       105 Oct 10 13:53 job.xml
[2025-10-10 15:06:19] -rw-r--r-- 2 boincer umatlas 218034735 Oct 10 13:53 EVNT.46676267._000298.pool.root.1
[2025-10-10 15:06:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 13:53 start_atlas.sh
[2025-10-10 15:06:19] drwxrwx--x 2 boincer umatlas      4096 Oct 10 13:53 shared
[2025-10-10 15:06:19] -rw-r--r-- 2 boincer umatlas    569680 Oct 10 13:53 input.tar.gz
[2025-10-10 15:06:19] -rw-r--r-- 1 boincer umatlas         0 Oct 10 13:53 boinc_lockfile
[2025-10-10 15:06:19] -rw-r--r-- 1 boincer umatlas      2548 Oct 10 13:53 pandaJob.out
[2025-10-10 15:06:19] -rw------- 1 boincer umatlas    975525 Oct 10 13:53 agis_schedconf.cvmfs.json
[2025-10-10 15:06:19] -rw------- 1 boincer umatlas   1560580 Oct 10 13:53 agis_ddmendpoints.agis.ALL.json
[2025-10-10 15:06:19] drwx------ 5 boincer umatlas      4096 Oct 10 13:53 pilot3
[2025-10-10 15:06:19] -rw-r--r-- 1 boincer umatlas      5952 Oct 10 15:04 init_data.xml
[2025-10-10 15:06:19] -rw------- 1 boincer umatlas 192601686 Oct 10 15:05 HITS.46676269._007462.pool.root.1
[2025-10-10 15:06:19] -rw-r--r-- 1 boincer umatlas       529 Oct 10 15:05 boinc_task_state.xml
[2025-10-10 15:06:19] -rw------- 1 boincer umatlas      1050 Oct 10 15:05 memory_monitor_summary.json
[2025-10-10 15:06:19] -rw------- 1 boincer umatlas        95 Oct 10 15:05 pilot_heartbeat.json
[2025-10-10 15:06:19] -rw------- 1 boincer umatlas    388655 Oct 10 15:05 log.46676269._007462.job.log.tgz.1
[2025-10-10 15:06:19] -rw------- 1 boincer umatlas      7848 Oct 10 15:05 heartbeat.json
[2025-10-10 15:06:19] -rw-r--r-- 1 boincer umatlas        27 Oct 10 15:06 wrapper_checkpoint.txt
[2025-10-10 15:06:19] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 15:06 boinc_mmap_file
[2025-10-10 15:06:19] -rw------- 1 boincer umatlas       745 Oct 10 15:06 pilotlog.txt
[2025-10-10 15:06:19] -rw------- 1 boincer umatlas    629173 Oct 10 15:06 log.46676269._007462.job.log.1
[2025-10-10 15:06:19] -rw------- 1 boincer umatlas       357 Oct 10 15:06 output.list
[2025-10-10 15:06:19] -rw-r--r-- 1 boincer umatlas       620 Oct 10 15:06 runtime_log
[2025-10-10 15:06:19] -rw------- 1 boincer umatlas   1034240 Oct 10 15:06 result.tar.gz
[2025-10-10 15:06:19] -rw-r--r-- 1 boincer umatlas      8705 Oct 10 15:06 runtime_log.err
[2025-10-10 15:06:19] -rw------- 1 boincer umatlas       659 Oct 10 15:06 pTSNDmFOoQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSKYNDmzAUKGm.diag
[2025-10-10 15:06:19] -rw-r--r-- 1 boincer umatlas     21524 Oct 10 15:06 stderr.txt
[2025-10-10 15:06:19] HITS file was successfully produced:
[2025-10-10 15:06:19] -rw------- 1 boincer umatlas 192601686 Oct 10 15:05 shared/HITS.pool.root.1
[2025-10-10 15:06:19]  *** Contents of shared directory: ***
[2025-10-10 15:06:19] total 402608
[2025-10-10 15:06:19] -rw-r--r-- 2 boincer umatlas 218034735 Oct 10 13:53 ATLAS.root_0
[2025-10-10 15:06:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 13:53 start_atlas.sh
[2025-10-10 15:06:19] -rw-r--r-- 2 boincer umatlas    569680 Oct 10 13:53 input.tar.gz
[2025-10-10 15:06:19] -rw------- 1 boincer umatlas 192601686 Oct 10 15:05 HITS.pool.root.1
[2025-10-10 15:06:19] -rw------- 1 boincer umatlas   1034240 Oct 10 15:06 result.tar.gz
15:06:20 (16813): run_atlas exited; CPU time 46247.565487
15:06:20 (16813): called boinc_finish(0)

</stderr_txt>
]]>

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