Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:47:30 (2308961): wrapper (7.7.26015): starting
13:47:30 (2308961): wrapper: running run_atlas (--nthreads 10)
[2025-10-10 13:47:30] Arguments: --nthreads 10
[2025-10-10 13:47:30] Threads: 10
[2025-10-10 13:47:30] Checking for CVMFS
[2025-10-10 13:47:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 13:47:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 13:47:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 13:47:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 13:47:31] 2.13.2.0 3269412 33166 359008 151556 0 593 35179474 40960001 48879 16776704 0 413818221 99.837 176324586 37050 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 13:47:31] CVMFS is ok
[2025-10-10 13:47:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 13:47:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 13:47:31] Further information can be found at the LHC@home message board.
[2025-10-10 13:47:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 13:47:31] Checking for apptainer binary...
[2025-10-10 13:47:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 13:47:31] Running /usr/bin/apptainer --version
[2025-10-10 13:47:31] apptainer version 1.4.3-1.el9
[2025-10-10 13:47:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 13:47:32] c8-16-2.aglt2.org
[2025-10-10 13:47:32] apptainer works
[2025-10-10 13:47:32] Set ATHENA_PROC_NUMBER=10
[2025-10-10 13:47:32] Set ATHENA_CORE_NUMBER=10
[2025-10-10 13:47:32] Starting ATLAS job with PandaID=6827003328
[2025-10-10 13:47:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 15:05:40]  *** The last 200 lines of the pilot log: ***
[2025-10-10 15:05:40] 2025-10-10 19:04:39,632 | INFO     | this job has now completed (state=finished)
[2025-10-10 15:05:40] 2025-10-10 19:04:39,632 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 15:05:40] 2025-10-10 19:04:39,633 | INFO     | log transfer has been attempted: DONE
[2025-10-10 15:05:40] 2025-10-10 19:04:39,633 | INFO     | job 6827003328 has finished - writing final server update
[2025-10-10 15:05:40] 2025-10-10 19:04:39,634 | INFO     | total number of processed events: 400 (read)
[2025-10-10 15:05:40] 2025-10-10 19:04:39,673 | INFO     | executing command: lscpu
[2025-10-10 15:05:40] 2025-10-10 19:04:39,840 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 15:05:40] 2025-10-10 19:04:40,120 | WARNING  | process 2332975 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 15:05:40] 2025-10-10 19:04:40,121 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6827003328/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 15:05:40] 2025-10-10 19:04:40,122 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6827003328/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 15:05:40] 2025-10-10 19:04:40,122 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3308271 B
[2025-10-10 15:05:40] 2025-10-10 19:04:40,122 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15293 B
[2025-10-10 15:05:40] 2025-10-10 19:04:40,123 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-10-10 15:05:40] 2025-10-10 19:04:41,112 | INFO     | time since job start (4589s) is within the limit (172800.0s)
[2025-10-10 15:05:40] 2025-10-10 19:04:43,147 | INFO     | time since job start (4591s) is within the limit (172800.0s)
[2025-10-10 15:05:40] 2025-10-10 19:04:45,823 | INFO     | PID=2314562 has CPU usage=15.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-10 15:05:40] 2025-10-10 19:04:45,824 | INFO     | .. there are 76 such processes running
[2025-10-10 15:05:40] 2025-10-10 19:04:46,825 | INFO     | time since job start (4594s) is within the limit (172800.0s)
[2025-10-10 15:05:40] 2025-10-10 19:04:48,834 | INFO     | time since job start (4596s) is within the limit (172800.0s)
[2025-10-10 15:05:40] 2025-10-10 19:04:50,841 | INFO     | time since job start (4598s) is within the limit (172800.0s)
[2025-10-10 15:05:40] 2025-10-10 19:04:52,848 | INFO     | time since job start (4600s) is within the limit (172800.0s)
[2025-10-10 15:05:40] 2025-10-10 19:04:54,854 | INFO     | time since job start (4602s) is within the limit (172800.0s)
[2025-10-10 15:05:40] 2025-10-10 19:04:56,861 | INFO     | time since job start (4604s) is within the limit (172800.0s)
[2025-10-10 15:05:40] 2025-10-10 19:04:58,868 | INFO     | time since job start (4606s) is within the limit (172800.0s)
[2025-10-10 15:05:40] 2025-10-10 19:05:00,875 | INFO     | time since job start (4608s) is within the limit (172800.0s)
[2025-10-10 15:05:40] 2025-10-10 19:05:02,884 | INFO     | time since job start (4610s) is within the limit (172800.0s)
[2025-10-10 15:05:40] 2025-10-10 19:05:04,891 | INFO     | time since job start (4612s) is within the limit (172800.0s)
[2025-10-10 15:05:40] 2025-10-10 19:05:06,284 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 15:05:40] 2025-10-10 19:05:06,297 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9897734374995
[2025-10-10 15:05:40] 2025-10-10 19:05:06,320 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6827003328/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 15:05:40] 2025-10-10 19:05:06,321 | INFO     | extracted standard info from prmon json
[2025-10-10 15:05:40] 2025-10-10 19:05:06,321 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 15:05:40] 2025-10-10 19:05:06,321 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 15:05:40] 2025-10-10 19:05:06,321 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 15:05:40] 2025-10-10 19:05:06,321 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 15:05:40] 2025-10-10 19:05:06,323 | INFO     | fitting pss+swap vs Time
[2025-10-10 15:05:40] 2025-10-10 19:05:06,323 | INFO     | sum of square deviations: 93240818.0
[2025-10-10 15:05:40] 2025-10-10 19:05:06,323 | INFO     | sum of deviations: 1364677848.0
[2025-10-10 15:05:40] 2025-10-10 19:05:06,323 | INFO     | mean x: 1760120901.0
[2025-10-10 15:05:40] 2025-10-10 19:05:06,323 | INFO     | mean y: 2219506.731343284
[2025-10-10 15:05:40] 2025-10-10 19:05:06,323 | INFO     | -- intersect: -25759008836.380157
[2025-10-10 15:05:40] 2025-10-10 19:05:06,324 | INFO     | intersect: -25759008836.380157
[2025-10-10 15:05:40] 2025-10-10 19:05:06,324 | INFO     | chi2: 0.04317577782633692
[2025-10-10 15:05:40] 2025-10-10 19:05:06,324 | INFO     | -- intersect: -25759008836.380157
[2025-10-10 15:05:40] 2025-10-10 19:05:06,324 | INFO     | current memory leak: 14.64 B/s (using 67 data points, chi2=0.04)
[2025-10-10 15:05:40] 2025-10-10 19:05:06,324 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2025-10-10 15:05:40] 2025-10-10 19:05:06,324 | INFO     | ..............................
[2025-10-10 15:05:40] 2025-10-10 19:05:06,324 | INFO     | . Timing measurements:
[2025-10-10 15:05:40] 2025-10-10 19:05:06,324 | INFO     | . get job = 0 s
[2025-10-10 15:05:40] 2025-10-10 19:05:06,324 | INFO     | . initial setup = 3 s
[2025-10-10 15:05:40] 2025-10-10 19:05:06,324 | INFO     | . payload setup = 29 s
[2025-10-10 15:05:40] 2025-10-10 19:05:06,325 | INFO     | . stage-in = 0 s
[2025-10-10 15:05:40] 2025-10-10 19:05:06,325 | INFO     | . payload execution = 4512 s
[2025-10-10 15:05:40] 2025-10-10 19:05:06,325 | INFO     | . stage-out = 1 s
[2025-10-10 15:05:40] 2025-10-10 19:05:06,325 | INFO     | . log creation = 0 s
[2025-10-10 15:05:40] 2025-10-10 19:05:06,325 | INFO     | ..............................
[2025-10-10 15:05:40] 2025-10-10 19:05:06,334 | INFO     | sufficient remaining disk space (168235630592 B)
[2025-10-10 15:05:40] 2025-10-10 19:05:06,352 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-10 15:05:40] 2025-10-10 19:05:06,353 | INFO     | size of work directory /tmp/boinchome/slots/8/PanDA_Pilot-6827003328: 3606047 B (within 2537553920 B limit)
[2025-10-10 15:05:40] 2025-10-10 19:05:06,353 | INFO     | pfn file=/tmp/boinchome/slots/8/PanDA_Pilot-6827003328/HITS.46376994._013347.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-10 15:05:40] 2025-10-10 19:05:06,353 | INFO     | total size of present files: 0 B (workdir size: 3606047 B)
[2025-10-10 15:05:40] 2025-10-10 19:05:06,353 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/8/PanDA_Pilot-6827003328/HITS.46376994._013347.pool.root.1 since it does not exist
[2025-10-10 15:05:40] 2025-10-10 19:05:06,559 | INFO     | 
[2025-10-10 15:05:40] 2025-10-10 19:05:06,559 | INFO     | job summary report
[2025-10-10 15:05:40] 2025-10-10 19:05:06,559 | INFO     | --------------------------------------------------
[2025-10-10 15:05:40] 2025-10-10 19:05:06,559 | INFO     | PanDA job id: 6827003328
[2025-10-10 15:05:40] 2025-10-10 19:05:06,559 | INFO     | task id: 46376994
[2025-10-10 15:05:40] 2025-10-10 19:05:06,559 | INFO     | errors: (none)
[2025-10-10 15:05:40] 2025-10-10 19:05:06,559 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 15:05:40] 2025-10-10 19:05:06,559 | INFO     | pilot state: finished 
[2025-10-10 15:05:40] 2025-10-10 19:05:06,559 | INFO     | transexitcode: 0
[2025-10-10 15:05:40] 2025-10-10 19:05:06,559 | INFO     | exeerrorcode: 0
[2025-10-10 15:05:40] 2025-10-10 19:05:06,559 | INFO     | exeerrordiag: 
[2025-10-10 15:05:40] 2025-10-10 19:05:06,559 | INFO     | exitcode: 0
[2025-10-10 15:05:40] 2025-10-10 19:05:06,559 | INFO     | exitmsg: OK
[2025-10-10 15:05:40] 2025-10-10 19:05:06,559 | INFO     | cpuconsumptiontime: 24747 s
[2025-10-10 15:05:40] 2025-10-10 19:05:06,560 | INFO     | nevents: 400
[2025-10-10 15:05:40] 2025-10-10 19:05:06,560 | INFO     | neventsw: 0
[2025-10-10 15:05:40] 2025-10-10 19:05:06,560 | INFO     | pid: 2332975
[2025-10-10 15:05:40] 2025-10-10 19:05:06,560 | INFO     | pgrp: 2332975
[2025-10-10 15:05:40] 2025-10-10 19:05:06,560 | INFO     | corecount: 10
[2025-10-10 15:05:40] 2025-10-10 19:05:06,560 | INFO     | event service: False
[2025-10-10 15:05:40] 2025-10-10 19:05:06,560 | INFO     | sizes: {0: 2348036, 1: 2348892, 12: 2348892, 20: 2349182, 22: 2349210, 4546: 2375472, 4549: 2384470, 4550: 2384526, 4577: 2384748}
[2025-10-10 15:05:40] 2025-10-10 19:05:06,560 | INFO     | --------------------------------------------------
[2025-10-10 15:05:40] 2025-10-10 19:05:06,560 | INFO     | 
[2025-10-10 15:05:40] 2025-10-10 19:05:06,560 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-10-10 15:05:40] 2025-10-10 19:05:06,635 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 15:05:40] 2025-10-10 19:05:06,635 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 15:05:40] 2025-10-10 19:05:06,635 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 15:05:40] 2025-10-10 19:05:06,635 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 15:05:40] 2025-10-10 19:05:06,635 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 15:05:40] 2025-10-10 19:05:06,635 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 15:05:40] 2025-10-10 19:05:06,635 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 15:05:40] 2025-10-10 19:05:06,635 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 15:05:40] 2025-10-10 19:05:06,635 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 15:05:40] 2025-10-10 19:05:06,635 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 15:05:40] 2025-10-10 19:05:06,636 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 15:05:40] 2025-10-10 19:05:06,636 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 15:05:40] 2025-10-10 19:05:06,636 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 15:05:40] 2025-10-10 19:05:06,636 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 15:05:40] 2025-10-10 19:05:06,636 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 15:05:40] 2025-10-10 19:05:06,636 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 15:05:40] 2025-10-10 19:05:06,636 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 15:05:40] 2025-10-10 19:05:06,636 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 15:05:40] 2025-10-10 19:05:06,636 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 15:05:40] 2025-10-10 19:05:06,636 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 15:05:40] 2025-10-10 19:05:06,636 | INFO     | job 6827003328 has completed (purged errors)
[2025-10-10 15:05:40] 2025-10-10 19:05:06,636 | INFO     | overall cleanup function is called
[2025-10-10 15:05:40] 2025-10-10 19:05:07,679 | INFO     | --- collectZombieJob: --- 10, [2332975]
[2025-10-10 15:05:40] 2025-10-10 19:05:07,679 | INFO     | zombie collector waiting for pid 2332975
[2025-10-10 15:05:40] 2025-10-10 19:05:07,679 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 15:05:40] 2025-10-10 19:05:07,679 | INFO     | collected zombie processes
[2025-10-10 15:05:40] 2025-10-10 19:05:07,679 | INFO     | will attempt to kill all subprocesses of pid=2332975
[2025-10-10 15:05:40] 2025-10-10 19:05:09,011 | INFO     | number of running child processes to parent process 2332975: 1
[2025-10-10 15:05:40] 2025-10-10 19:05:09,012 | INFO     | maximum number of monitored processes: 6
[2025-10-10 15:05:40] 2025-10-10 19:05:09,012 | INFO     | aborting job monitoring since job object (job id=6827003328) has expired
[2025-10-10 15:05:40] 2025-10-10 19:05:10,003 | INFO     | process IDs to be killed: [2332975] (in reverse order)
[2025-10-10 15:05:40] 2025-10-10 19:05:10,909 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 15:05:40] 2025-10-10 19:05:10,909 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 15:05:40] 2025-10-10 19:05:11,133 | INFO     | did not find any defunct processes belonging to 2332975
[2025-10-10 15:05:40] 2025-10-10 19:05:11,210 | INFO     | did not find any defunct processes belonging to 2332975
[2025-10-10 15:05:40] 2025-10-10 19:05:11,210 | INFO     | ready for new job
[2025-10-10 15:05:40] 2025-10-10 19:05:11,210 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 15:05:40] 2025-10-10 19:05:11,211 | INFO     | ***************************************
[2025-10-10 15:05:40] 2025-10-10 19:05:11,212 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 15:05:40] 2025-10-10 19:05:11,212 | INFO     | ***************************************
[2025-10-10 15:05:40] 2025-10-10 19:05:11,212 | INFO     | 
[2025-10-10 15:05:40] 2025-10-10 19:05:11,225 | INFO     | architecture information:
[2025-10-10 15:05:40] 2025-10-10 19:05:11,225 | INFO     | executing command: cat /etc/os-release
[2025-10-10 15:05:40] 2025-10-10 19:05:11,276 | INFO     | cat /etc/os-release:
[2025-10-10 15:05:40] NAME="CentOS Linux"
[2025-10-10 15:05:40] VERSION="7 (Core)"
[2025-10-10 15:05:40] ID="centos"
[2025-10-10 15:05:40] ID_LIKE="rhel fedora"
[2025-10-10 15:05:40] VERSION_ID="7"
[2025-10-10 15:05:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 15:05:40] ANSI_COLOR="0;31"
[2025-10-10 15:05:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 15:05:40] HOME_URL="https://www.centos.org/"
[2025-10-10 15:05:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 15:05:40] 
[2025-10-10 15:05:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 15:05:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 15:05:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 15:05:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 15:05:40] 
[2025-10-10 15:05:40] 2025-10-10 19:05:11,276 | INFO     | ***************************************
[2025-10-10 15:05:40] 2025-10-10 19:05:11,780 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-10-10 15:05:40] 2025-10-10 19:05:11,907 | INFO     | sufficient remaining disk space (168237727744 B)
[2025-10-10 15:05:40] 2025-10-10 19:05:11,907 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 15:05:40] 2025-10-10 19:05:11,907 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 15:05:40] 2025-10-10 19:05:11,907 | INFO     | update_server=False
[2025-10-10 15:05:40] 2025-10-10 19:05:11,907 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 15:05:40] 2025-10-10 19:05:11,908 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 15:05:40] 2025-10-10 19:05:11,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 15:05:40] 2025-10-10 19:05:12,517 | INFO     | all job control threads have been joined
[2025-10-10 15:05:40] 2025-10-10 19:05:12,525 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 15:05:40] 2025-10-10 19:05:12,525 | INFO     | aborting loop
[2025-10-10 15:05:40] 2025-10-10 19:05:12,788 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 15:05:40] 2025-10-10 19:05:12,912 | INFO     | [job] retrieve thread has finished
[2025-10-10 15:05:40] 2025-10-10 19:05:12,916 | INFO     | [job] queue monitor thread has finished
[2025-10-10 15:05:40] 2025-10-10 19:05:12,973 | INFO     | all payload control threads have been joined
[2025-10-10 15:05:40] 2025-10-10 19:05:13,023 | INFO     | all data control threads have been joined
[2025-10-10 15:05:40] 2025-10-10 19:05:13,243 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 15:05:40] 2025-10-10 19:05:13,498 | INFO     | [payload] failed_post thread has finished
[2025-10-10 15:05:40] 2025-10-10 19:05:13,525 | INFO     | [job] control thread has finished
[2025-10-10 15:05:40] 2025-10-10 19:05:13,531 | INFO     | [job] job monitor thread has finished
[2025-10-10 15:05:40] 2025-10-10 19:05:13,617 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 15:05:40] 2025-10-10 19:05:13,690 | INFO     | [data] copytool_in thread has finished
[2025-10-10 15:05:40] 2025-10-10 19:05:13,918 | INFO     | [data] copytool_out thread has finished
[2025-10-10 15:05:40] 2025-10-10 19:05:13,932 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 15:05:40] 2025-10-10 19:05:13,956 | INFO     | [job] validate thread has finished
[2025-10-10 15:05:40] 2025-10-10 19:05:13,979 | INFO     | [payload] control thread has finished
[2025-10-10 15:05:40] 2025-10-10 19:05:14,029 | INFO     | [data] control thread has finished
[2025-10-10 15:05:40] 2025-10-10 19:05:14,170 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 15:05:40] 2025-10-10 19:05:14,297 | INFO     | [payload] validate_post thread has finished
[2025-10-10 15:05:40] 2025-10-10 19:05:16,797 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 15:05:40] 2025-10-10 19:05:19,462 | INFO     | [monitor] cgroup control has ended
[2025-10-10 15:05:40] 2025-10-10 19:05:19,670 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140211478579008)>', '<ExcThread(monitor, started 140211103176448)>']
[2025-10-10 15:05:40] 2025-10-10 19:05:24,714 | INFO     | all workflow threads have been joined
[2025-10-10 15:05:40] 2025-10-10 19:05:24,719 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 15:05:40] 2025-10-10 19:05:24,720 | INFO     | traces error code: 0
[2025-10-10 15:05:40] 2025-10-10 19:05:24,720 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 15:05:40] 2025-10-10 19:05:39,078 | INFO     | PID=2314562 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 15:05:40] 2025-10-10 19:05:39,078 | INFO     | .. there are 76 such processes running
[2025-10-10 15:05:40] 2025-10-10 19:05:39,078 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 15:05:40] 2025-10-10 19:05:39,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 15:05:40] 2025-10-10 19:05:39,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 15:05:40] 2025-10-10 19:05:39,078 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 15:05:40] 2025-10-10 19:05:39,079 | INFO     | [monitor] control thread has ended
[2025-10-10 15:05:40] 2025-10-10 19:05:39,522 [wrapper] ==== pilot stdout END ====
[2025-10-10 15:05:40] 2025-10-10 19:05:39,551 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 15:05:40] 2025-10-10 19:05:39,564 [wrapper] pilotpid: 2314562
[2025-10-10 15:05:40] 2025-10-10 19:05:39,578 [wrapper] Pilot exit status: 0
[2025-10-10 15:05:40] 2025-10-10 19:05:39,707 [wrapper] pandaids: 6827003328
[2025-10-10 15:05:40] 2025-10-10 19:05:39,984 [wrapper] cleanup supervisor_pilot 3067051 2314563
[2025-10-10 15:05:40] 2025-10-10 19:05:39,993 [wrapper] Test setup, not cleaning
[2025-10-10 15:05:40] 2025-10-10 19:05:40,020 [wrapper] apfmon messages muted
[2025-10-10 15:05:40] 2025-10-10 19:05:40,075 [wrapper] ==== wrapper stdout END ====
[2025-10-10 15:05:40] 2025-10-10 19:05:40,089 [wrapper] ==== wrapper stderr END ====
[2025-10-10 15:05:40]  *** Error codes and diagnostics ***
[2025-10-10 15:05:40]     "exeErrorCode": 0,
[2025-10-10 15:05:40]     "exeErrorDiag": "",
[2025-10-10 15:05:40]     "pilotErrorCode": 0,
[2025-10-10 15:05:40]     "pilotErrorDiag": "",
[2025-10-10 15:05:40]  *** Listing of results directory ***
[2025-10-10 15:05:40] total 420552
[2025-10-10 15:05:40] -rw-r--r--. 1 boincer umatlas    552446 Oct  2 04:23 pilot3.tar.gz
[2025-10-10 15:05:40] -rw-r--r--. 1 boincer umatlas      5112 Oct  2 04:43 queuedata.json
[2025-10-10 15:05:40] -rwx------. 1 boincer umatlas     36292 Oct  2 04:44 runpilot2-wrapper.sh
[2025-10-10 15:05:40] -rw-r--r--. 1 boincer umatlas       100 Oct 10 13:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 15:05:40] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 13:47 run_atlas
[2025-10-10 15:05:40] -rw-r--r--. 1 boincer umatlas       105 Oct 10 13:47 job.xml
[2025-10-10 15:05:40] -rw-r--r--. 2 boincer umatlas 222915601 Oct 10 13:47 EVNT.46376992._000388.pool.root.1
[2025-10-10 15:05:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 13:47 start_atlas.sh
[2025-10-10 15:05:40] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 13:47 shared
[2025-10-10 15:05:40] -rw-r--r--. 2 boincer umatlas    565608 Oct 10 13:47 input.tar.gz
[2025-10-10 15:05:40] -rw-r--r--. 1 boincer umatlas         0 Oct 10 13:47 boinc_lockfile
[2025-10-10 15:05:40] -rw-r--r--. 1 boincer umatlas      2557 Oct 10 13:47 pandaJob.out
[2025-10-10 15:05:40] -rw-------. 1 boincer umatlas    975525 Oct 10 13:48 agis_schedconf.cvmfs.json
[2025-10-10 15:05:40] -rw-------. 1 boincer umatlas   1560580 Oct 10 13:48 agis_ddmendpoints.agis.ALL.json
[2025-10-10 15:05:40] drwx------. 4 boincer umatlas      4096 Oct 10 13:48 pilot3
[2025-10-10 15:05:40] -rw-r--r--. 1 boincer umatlas      7162 Oct 10 15:03 init_data.xml
[2025-10-10 15:05:40] -rw-------. 1 boincer umatlas 201933591 Oct 10 15:04 HITS.46376994._013347.pool.root.1
[2025-10-10 15:05:40] -rw-r--r--. 1 boincer umatlas       530 Oct 10 15:04 boinc_task_state.xml
[2025-10-10 15:05:40] -rw-------. 1 boincer umatlas      1034 Oct 10 15:04 memory_monitor_summary.json
[2025-10-10 15:05:40] -rw-------. 1 boincer umatlas    337855 Oct 10 15:04 log.46376994._013347.job.log.tgz.1
[2025-10-10 15:05:40] -rw-------. 1 boincer umatlas        95 Oct 10 15:04 pilot_heartbeat.json
[2025-10-10 15:05:40] -rw-------. 1 boincer umatlas      7775 Oct 10 15:05 heartbeat.json
[2025-10-10 15:05:40] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 15:05 boinc_mmap_file
[2025-10-10 15:05:40] -rw-r--r--. 1 boincer umatlas        27 Oct 10 15:05 wrapper_checkpoint.txt
[2025-10-10 15:05:40] -rw-------. 1 boincer umatlas       823 Oct 10 15:05 pilotlog.txt
[2025-10-10 15:05:40] -rw-------. 1 boincer umatlas    616228 Oct 10 15:05 log.46376994._013347.job.log.1
[2025-10-10 15:05:40] -rw-------. 1 boincer umatlas       357 Oct 10 15:05 output.list
[2025-10-10 15:05:40] -rw-r--r--. 1 boincer umatlas       620 Oct 10 15:05 runtime_log
[2025-10-10 15:05:40] -rw-------. 1 boincer umatlas    972800 Oct 10 15:05 result.tar.gz
[2025-10-10 15:05:40] -rw-------. 1 boincer umatlas       651 Oct 10 15:05 tyONDmO6TO8n9Rq4apOajLDm4fhM0noT9bVof3QYDmQ48LDmLevLyn.diag
[2025-10-10 15:05:40] -rw-r--r--. 1 boincer umatlas      8700 Oct 10 15:05 runtime_log.err
[2025-10-10 15:05:40] -rw-r--r--. 1 boincer umatlas     22527 Oct 10 15:05 stderr.txt
[2025-10-10 15:05:40] HITS file was successfully produced:
[2025-10-10 15:05:40] -rw-------. 1 boincer umatlas 201933591 Oct 10 15:04 shared/HITS.pool.root.1
[2025-10-10 15:05:40]  *** Contents of shared directory: ***
[2025-10-10 15:05:40] total 416424
[2025-10-10 15:05:40] -rw-r--r--. 2 boincer umatlas 222915601 Oct 10 13:47 ATLAS.root_0
[2025-10-10 15:05:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 13:47 start_atlas.sh
[2025-10-10 15:05:40] -rw-r--r--. 2 boincer umatlas    565608 Oct 10 13:47 input.tar.gz
[2025-10-10 15:05:40] -rw-------. 1 boincer umatlas 201933591 Oct 10 15:04 HITS.pool.root.1
[2025-10-10 15:05:40] -rw-------. 1 boincer umatlas    972800 Oct 10 15:05 result.tar.gz
15:05:41 (2308961): run_atlas exited; CPU time 24910.981565
15:05:41 (2308961): called boinc_finish(0)

</stderr_txt>
]]>

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