Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:30:46 (3838324): wrapper (7.7.26015): starting
14:30:46 (3838324): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 14:30:46] Arguments: --nthreads 8
[2025-10-10 14:30:46] Threads: 8
[2025-10-10 14:30:46] Checking for CVMFS
[2025-10-10 14:30:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 14:30:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 14:30:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 14:30:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 14:30:48] 2.13.2.0 108345 126727 586044 151558 3 323 29435338 32935936 27767 16776704 0 227371884 99.570 247766939 20737 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 14:30:48] CVMFS is ok
[2025-10-10 14:30:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 14:30:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 14:30:48] Further information can be found at the LHC@home message board.
[2025-10-10 14:30:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 14:30:48] Checking for apptainer binary...
[2025-10-10 14:30:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 14:30:48] Running /usr/bin/apptainer --version
[2025-10-10 14:30:49] apptainer version 1.4.3-1.el9
[2025-10-10 14:30:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 14:30:49] c6-8-25-2.aglt2.org
[2025-10-10 14:30:49] apptainer works
[2025-10-10 14:30:49] Set ATHENA_PROC_NUMBER=8
[2025-10-10 14:30:49] Set ATHENA_CORE_NUMBER=8
[2025-10-10 14:30:50] Starting ATLAS job with PandaID=6827003352
[2025-10-10 14:30:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:00:04 (3838324): BOINC client no longer exists - exiting
16:00:04 (3838324): timer handler: client dead, exiting
16:10:52 (4181065): wrapper (7.7.26015): starting
16:10:52 (4181065): wrapper: running run_atlas (--nthreads 9)
[2025-10-10 16:10:52] Arguments: --nthreads 9
[2025-10-10 16:10:52] Threads: 9
[2025-10-10 16:10:52] This job has been restarted, cleaning up previous attempt
[2025-10-10 16:10:52] Checking for CVMFS
[2025-10-10 16:10:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 16:10:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 16:10:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 16:10:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 16:10:53] 2.13.2.0 108345 126827 590172 151559 3 470 29602105 32935937 23038 16776704 0 227782056 99.571 247807280 20738 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 16:10:53] CVMFS is ok
[2025-10-10 16:10:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 16:10:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 16:10:53] Further information can be found at the LHC@home message board.
[2025-10-10 16:10:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 16:10:53] Checking for apptainer binary...
[2025-10-10 16:10:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 16:10:53] Running /usr/bin/apptainer --version
[2025-10-10 16:10:53] apptainer version 1.4.3-1.el9
[2025-10-10 16:10:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 16:10:53] c6-8-25-2.aglt2.org
[2025-10-10 16:10:53] apptainer works
[2025-10-10 16:10:53] Set ATHENA_PROC_NUMBER=9
[2025-10-10 16:10:53] Set ATHENA_CORE_NUMBER=9
[2025-10-10 16:10:53] Starting ATLAS job with PandaID=6827003352
[2025-10-10 16:10:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 21:26:46]  *** The last 200 lines of the pilot log: ***
[2025-10-10 21:26:46] 2025-10-11 01:26:11,548 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 21:26:46] 2025-10-11 01:26:11,548 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 21:26:46] 2025-10-11 01:26:11,554 | INFO     | fitting pss+swap vs Time
[2025-10-10 21:26:46] 2025-10-11 01:26:11,555 | INFO     | sum of square deviations: 9237509749.935484
[2025-10-10 21:26:46] 2025-10-11 01:26:11,558 | INFO     | sum of deviations: 88414819585.77419
[2025-10-10 21:26:46] 2025-10-11 01:26:11,558 | INFO     | mean x: 1760136522.8387096
[2025-10-10 21:26:46] 2025-10-11 01:26:11,558 | INFO     | mean y: 2185064.435483871
[2025-10-10 21:26:46] 2025-10-11 01:26:11,558 | INFO     | -- intersect: -16844579629.285494
[2025-10-10 21:26:46] 2025-10-11 01:26:11,558 | INFO     | intersect: -16844579629.285494
[2025-10-10 21:26:46] 2025-10-11 01:26:11,559 | INFO     | chi2: 2.752175027879935
[2025-10-10 21:26:46] 2025-10-11 01:26:11,559 | INFO     | sum of square deviations: 8797728876.852468
[2025-10-10 21:26:46] 2025-10-11 01:26:11,562 | INFO     | sum of deviations: 108677493048.4919
[2025-10-10 21:26:46] 2025-10-11 01:26:11,563 | INFO     | mean x: 1760136370.3442624
[2025-10-10 21:26:46] 2025-10-11 01:26:11,563 | INFO     | mean y: 2192000.252459016
[2025-10-10 21:26:46] 2025-10-11 01:26:11,563 | INFO     | -- intersect: -21740602171.977413
[2025-10-10 21:26:46] 2025-10-11 01:26:11,563 | INFO     | intersect: -21740602171.977413
[2025-10-10 21:26:46] 2025-10-11 01:26:11,564 | INFO     | chi2: 1.9304125157524101
[2025-10-10 21:26:46] 2025-10-11 01:26:11,564 | INFO     | current chi2=1.9304125157524101 (change=29.85865738199608 %)
[2025-10-10 21:26:46] 2025-10-11 01:26:11,564 | INFO     | sum of square deviations: 8372115588.946641
[2025-10-10 21:26:46] 2025-10-11 01:26:11,567 | INFO     | sum of deviations: 105948894557.98671
[2025-10-10 21:26:46] 2025-10-11 01:26:11,567 | INFO     | mean x: 1760136217.8466666
[2025-10-10 21:26:46] 2025-10-11 01:26:11,567 | INFO     | mean y: 2191024.5866666664
[2025-10-10 21:26:46] 2025-10-11 01:26:11,567 | INFO     | -- intersect: -22272284831.735455
[2025-10-10 21:26:46] 2025-10-11 01:26:11,567 | INFO     | intersect: -22272284831.735455
[2025-10-10 21:26:46] 2025-10-11 01:26:11,567 | INFO     | chi2: 1.9295271250007966
[2025-10-10 21:26:46] 2025-10-11 01:26:11,568 | INFO     | current chi2=1.9295271250007966 (change=0.045865365272377515 %)
[2025-10-10 21:26:46] 2025-10-11 01:26:11,568 | INFO     | right removable region: 299
[2025-10-10 21:26:46] 2025-10-11 01:26:11,568 | INFO     | sum of square deviations: 8797664826.852476
[2025-10-10 21:26:46] 2025-10-11 01:26:11,571 | INFO     | sum of deviations: 34130596438.80327
[2025-10-10 21:26:46] 2025-10-11 01:26:11,572 | INFO     | mean x: 1760136675.3442624
[2025-10-10 21:26:46] 2025-10-11 01:26:11,572 | INFO     | mean y: 2203808.8590163933
[2025-10-10 21:26:46] 2025-10-11 01:26:11,572 | INFO     | -- intersect: -6826257575.570044
[2025-10-10 21:26:46] 2025-10-11 01:26:11,572 | INFO     | intersect: -6826257575.570044
[2025-10-10 21:26:46] 2025-10-11 01:26:11,573 | INFO     | chi2: 1.05662202215346
[2025-10-10 21:26:46] 2025-10-11 01:26:11,573 | INFO     | current chi2=1.05662202215346 (change=61.60774618439145 %)
[2025-10-10 21:26:46] 2025-10-11 01:26:11,573 | INFO     | sum of square deviations: 8372024576.946639
[2025-10-10 21:26:46] 2025-10-11 01:26:11,576 | INFO     | sum of deviations: 16650878792.04
[2025-10-10 21:26:46] 2025-10-11 01:26:11,576 | INFO     | mean x: 1760136827.8466666
[2025-10-10 21:26:46] 2025-10-11 01:26:11,576 | INFO     | mean y: 2210049.74
[2025-10-10 21:26:46] 2025-10-11 01:26:11,577 | INFO     | -- intersect: -3498475442.5820355
[2025-10-10 21:26:46] 2025-10-11 01:26:11,577 | INFO     | intersect: -3498475442.5820355
[2025-10-10 21:26:46] 2025-10-11 01:26:11,577 | INFO     | chi2: 0.9066771311246054
[2025-10-10 21:26:46] 2025-10-11 01:26:11,577 | INFO     | current chi2=0.9066771311246054 (change=14.19096780921315 %)
[2025-10-10 21:26:46] 2025-10-11 01:26:11,577 | INFO     | left removable region: 20
[2025-10-10 21:26:46] 2025-10-11 01:26:11,578 | INFO     | sum of square deviations: 6734083134.437273
[2025-10-10 21:26:46] 2025-10-11 01:26:11,581 | INFO     | sum of deviations: 31554753912.06452
[2025-10-10 21:26:46] 2025-10-11 01:26:11,581 | INFO     | mean x: 1760136797.3620071
[2025-10-10 21:26:46] 2025-10-11 01:26:11,581 | INFO     | mean y: 2218535.7419354836
[2025-10-10 21:26:46] 2025-10-11 01:26:11,581 | INFO     | -- intersect: -8245479388.9093485
[2025-10-10 21:26:46] 2025-10-11 01:26:11,581 | INFO     | intersect: -8245479388.9093485
[2025-10-10 21:26:46] 2025-10-11 01:26:11,582 | INFO     | chi2: 0.07225604473701375
[2025-10-10 21:26:46] 2025-10-11 01:26:11,582 | INFO     | -- intersect: -8245479388.9093485
[2025-10-10 21:26:46] 2025-10-11 01:26:11,582 | INFO     | current memory leak: 4.69 B/s (using 279 data points, chi2=0.07)
[2025-10-10 21:26:46] 2025-10-11 01:26:11,583 | INFO     | could have reported an average CPU frequency of 2572 MHz (14 samples)
[2025-10-10 21:26:46] 2025-10-11 01:26:11,583 | INFO     | ..............................
[2025-10-10 21:26:46] 2025-10-11 01:26:11,583 | INFO     | . Timing measurements:
[2025-10-10 21:26:46] 2025-10-11 01:26:11,583 | INFO     | . get job = 0 s
[2025-10-10 21:26:46] 2025-10-11 01:26:11,583 | INFO     | . initial setup = 1 s
[2025-10-10 21:26:46] 2025-10-11 01:26:11,583 | INFO     | . payload setup = 7 s
[2025-10-10 21:26:46] 2025-10-11 01:26:11,583 | INFO     | . stage-in = 0 s
[2025-10-10 21:26:46] 2025-10-11 01:26:11,583 | INFO     | . payload execution = 18861 s
[2025-10-10 21:26:46] 2025-10-11 01:26:11,583 | INFO     | . stage-out = 3 s
[2025-10-10 21:26:46] 2025-10-11 01:26:11,584 | INFO     | . log creation = 0 s
[2025-10-10 21:26:46] 2025-10-11 01:26:11,584 | INFO     | ..............................
[2025-10-10 21:26:46] 2025-10-11 01:26:11,701 | INFO     | 
[2025-10-10 21:26:46] 2025-10-11 01:26:11,701 | INFO     | job summary report
[2025-10-10 21:26:46] 2025-10-11 01:26:11,701 | INFO     | --------------------------------------------------
[2025-10-10 21:26:46] 2025-10-11 01:26:11,701 | INFO     | PanDA job id: 6827003352
[2025-10-10 21:26:46] 2025-10-11 01:26:11,701 | INFO     | task id: 46376994
[2025-10-10 21:26:46] 2025-10-11 01:26:11,701 | INFO     | errors: (none)
[2025-10-10 21:26:46] 2025-10-11 01:26:11,701 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 21:26:46] 2025-10-11 01:26:11,701 | INFO     | pilot state: finished 
[2025-10-10 21:26:46] 2025-10-11 01:26:11,701 | INFO     | transexitcode: 0
[2025-10-10 21:26:46] 2025-10-11 01:26:11,702 | INFO     | exeerrorcode: 0
[2025-10-10 21:26:46] 2025-10-11 01:26:11,702 | INFO     | exeerrordiag: 
[2025-10-10 21:26:46] 2025-10-11 01:26:11,702 | INFO     | exitcode: 0
[2025-10-10 21:26:46] 2025-10-11 01:26:11,702 | INFO     | exitmsg: OK
[2025-10-10 21:26:46] 2025-10-11 01:26:11,702 | INFO     | cpuconsumptiontime: 55258 s
[2025-10-10 21:26:46] 2025-10-11 01:26:11,702 | INFO     | nevents: 400
[2025-10-10 21:26:46] 2025-10-11 01:26:11,702 | INFO     | neventsw: 0
[2025-10-10 21:26:46] 2025-10-11 01:26:11,702 | INFO     | pid: 39959
[2025-10-10 21:26:46] 2025-10-11 01:26:11,702 | INFO     | pgrp: 39959
[2025-10-10 21:26:46] 2025-10-11 01:26:11,702 | INFO     | corecount: 9
[2025-10-10 21:26:46] 2025-10-11 01:26:11,702 | INFO     | event service: False
[2025-10-10 21:26:46] 2025-10-11 01:26:11,702 | INFO     | sizes: {0: 2348860, 6: 2349122, 11: 2349150, 18872: 2381553, 18875: 2390551, 18878: 2390607, 18889: 2390929}
[2025-10-10 21:26:46] 2025-10-11 01:26:11,702 | INFO     | --------------------------------------------------
[2025-10-10 21:26:46] 2025-10-11 01:26:11,703 | INFO     | 
[2025-10-10 21:26:46] 2025-10-11 01:26:11,703 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-10 21:26:46] 2025-10-11 01:26:11,761 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 21:26:46] 2025-10-11 01:26:11,762 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 21:26:46] 2025-10-11 01:26:11,762 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 21:26:46] 2025-10-11 01:26:11,762 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 21:26:46] 2025-10-11 01:26:11,762 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 21:26:46] 2025-10-11 01:26:11,762 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 21:26:46] 2025-10-11 01:26:11,762 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 21:26:46] 2025-10-11 01:26:11,762 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 21:26:46] 2025-10-11 01:26:11,762 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 21:26:46] 2025-10-11 01:26:11,762 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 21:26:46] 2025-10-11 01:26:11,762 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 21:26:46] 2025-10-11 01:26:11,763 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 21:26:46] 2025-10-11 01:26:11,763 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 21:26:46] 2025-10-11 01:26:11,763 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 21:26:46] 2025-10-11 01:26:11,763 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 21:26:46] 2025-10-11 01:26:11,763 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 21:26:46] 2025-10-11 01:26:11,763 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 21:26:46] 2025-10-11 01:26:11,763 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 21:26:46] 2025-10-11 01:26:11,763 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 21:26:46] 2025-10-11 01:26:11,763 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 21:26:46] 2025-10-11 01:26:11,763 | INFO     | job 6827003352 has completed (purged errors)
[2025-10-10 21:26:46] 2025-10-11 01:26:11,764 | INFO     | overall cleanup function is called
[2025-10-10 21:26:46] 2025-10-11 01:26:12,787 | INFO     | --- collectZombieJob: --- 10, [39959]
[2025-10-10 21:26:46] 2025-10-11 01:26:12,787 | INFO     | zombie collector waiting for pid 39959
[2025-10-10 21:26:46] 2025-10-11 01:26:12,788 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 21:26:46] 2025-10-11 01:26:12,788 | INFO     | collected zombie processes
[2025-10-10 21:26:46] 2025-10-11 01:26:12,788 | INFO     | will attempt to kill all subprocesses of pid=39959
[2025-10-10 21:26:46] 2025-10-11 01:26:13,242 | INFO     | process IDs to be killed: [39959] (in reverse order)
[2025-10-10 21:26:46] 2025-10-11 01:26:13,385 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 21:26:46] 2025-10-11 01:26:13,386 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 21:26:46] 2025-10-11 01:26:13,402 | INFO     | did not find any defunct processes belonging to 39959
[2025-10-10 21:26:46] 2025-10-11 01:26:13,419 | INFO     | did not find any defunct processes belonging to 39959
[2025-10-10 21:26:46] 2025-10-11 01:26:13,419 | INFO     | ready for new job
[2025-10-10 21:26:46] 2025-10-11 01:26:13,419 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 21:26:46] 2025-10-11 01:26:13,422 | INFO     | ***************************************
[2025-10-10 21:26:46] 2025-10-11 01:26:13,422 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 21:26:46] 2025-10-11 01:26:13,422 | INFO     | ***************************************
[2025-10-10 21:26:46] 2025-10-11 01:26:13,422 | INFO     | 
[2025-10-10 21:26:46] 2025-10-11 01:26:13,440 | INFO     | architecture information:
[2025-10-10 21:26:46] 2025-10-11 01:26:13,441 | INFO     | executing command: cat /etc/os-release
[2025-10-10 21:26:46] 2025-10-11 01:26:13,462 | INFO     | cat /etc/os-release:
[2025-10-10 21:26:46] NAME="CentOS Linux"
[2025-10-10 21:26:46] VERSION="7 (Core)"
[2025-10-10 21:26:46] ID="centos"
[2025-10-10 21:26:46] ID_LIKE="rhel fedora"
[2025-10-10 21:26:46] VERSION_ID="7"
[2025-10-10 21:26:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 21:26:46] ANSI_COLOR="0;31"
[2025-10-10 21:26:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 21:26:46] HOME_URL="https://www.centos.org/"
[2025-10-10 21:26:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 21:26:46] 
[2025-10-10 21:26:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 21:26:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 21:26:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 21:26:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 21:26:46] 
[2025-10-10 21:26:46] 2025-10-11 01:26:13,462 | INFO     | ***************************************
[2025-10-10 21:26:46] 2025-10-11 01:26:13,966 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-10 21:26:46] 2025-10-11 01:26:13,989 | INFO     | sufficient remaining disk space (73616326656 B)
[2025-10-10 21:26:46] 2025-10-11 01:26:13,989 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 21:26:46] 2025-10-11 01:26:13,989 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 21:26:46] 2025-10-11 01:26:13,990 | INFO     | update_server=False
[2025-10-10 21:26:46] 2025-10-11 01:26:13,990 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 21:26:46] 2025-10-11 01:26:13,991 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 21:26:46] 2025-10-11 01:26:13,991 | INFO     | aborting loop
[2025-10-10 21:26:46] 2025-10-11 01:26:13,995 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 21:26:46] 2025-10-11 01:26:14,995 | INFO     | [job] retrieve thread has finished
[2025-10-10 21:26:46] 2025-10-11 01:26:14,997 | INFO     | [job] job monitor thread has finished
[2025-10-10 21:26:46] 2025-10-11 01:26:15,071 | INFO     | all data control threads have been joined
[2025-10-10 21:26:46] 2025-10-11 01:26:15,196 | INFO     | all payload control threads have been joined
[2025-10-10 21:26:46] 2025-10-11 01:26:15,295 | INFO     | [payload] validate_post thread has finished
[2025-10-10 21:26:46] 2025-10-11 01:26:15,330 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 21:26:46] 2025-10-11 01:26:15,340 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 21:26:46] 2025-10-11 01:26:15,565 | INFO     | all job control threads have been joined
[2025-10-10 21:26:46] 2025-10-11 01:26:15,622 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 21:26:46] 2025-10-11 01:26:16,002 | INFO     | [data] copytool_out thread has finished
[2025-10-10 21:26:46] 2025-10-11 01:26:16,083 | INFO     | [data] control thread has finished
[2025-10-10 21:26:46] 2025-10-11 01:26:16,172 | INFO     | [job] validate thread has finished
[2025-10-10 21:26:46] 2025-10-11 01:26:16,204 | INFO     | [payload] control thread has finished
[2025-10-10 21:26:46] 2025-10-11 01:26:16,211 | INFO     | [payload] failed_post thread has finished
[2025-10-10 21:26:46] 2025-10-11 01:26:16,345 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 21:26:46] 2025-10-11 01:26:16,415 | INFO     | [data] copytool_in thread has finished
[2025-10-10 21:26:46] 2025-10-11 01:26:16,585 | INFO     | [job] control thread has finished
[2025-10-10 21:26:46] 2025-10-11 01:26:16,716 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 21:26:46] 2025-10-11 01:26:17,722 | INFO     | [job] queue monitor thread has finished
[2025-10-10 21:26:46] 2025-10-11 01:26:19,631 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 21:26:46] 2025-10-11 01:26:24,406 | INFO     | job.realtimelogging is not enabled
[2025-10-10 21:26:46] 2025-10-11 01:26:25,411 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 21:26:46] 2025-10-11 01:26:39,874 | INFO     | [monitor] cgroup control has ended
[2025-10-10 21:26:46] 2025-10-11 01:26:40,652 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139656297973568)>', '<ExcThread(monitor, started 139655810897664)>']
[2025-10-10 21:26:46] 2025-10-11 01:26:43,620 | INFO     | PID=6144 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-10 21:26:46] 2025-10-11 01:26:43,620 | INFO     | .. there are 30 such processes running
[2025-10-10 21:26:46] 2025-10-11 01:26:43,621 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 21:26:46] 2025-10-11 01:26:43,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 21:26:46] 2025-10-11 01:26:43,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 21:26:46] 2025-10-11 01:26:43,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 21:26:46] 2025-10-11 01:26:43,621 | INFO     | [monitor] control thread has ended
[2025-10-10 21:26:46] 2025-10-11 01:26:45,678 | INFO     | all workflow threads have been joined
[2025-10-10 21:26:46] 2025-10-11 01:26:45,678 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 21:26:46] 2025-10-11 01:26:45,679 | INFO     | traces error code: 0
[2025-10-10 21:26:46] 2025-10-11 01:26:45,679 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 21:26:46] 2025-10-11 01:26:46,004 [wrapper] ==== pilot stdout END ====
[2025-10-10 21:26:46] 2025-10-11 01:26:46,013 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 21:26:46] 2025-10-11 01:26:46,017 [wrapper] pilotpid: 6144
[2025-10-10 21:26:46] 2025-10-11 01:26:46,020 [wrapper] Pilot exit status: 0
[2025-10-10 21:26:46] 2025-10-11 01:26:46,047 [wrapper] pandaids: 6827003352 6827003352
[2025-10-10 21:26:46] 2025-10-11 01:26:46,137 [wrapper] cleanup supervisor_pilot  997977 6146
[2025-10-10 21:26:46] 2025-10-11 01:26:46,142 [wrapper] Test setup, not cleaning
[2025-10-10 21:26:46] 2025-10-11 01:26:46,145 [wrapper] apfmon messages muted
[2025-10-10 21:26:46] 2025-10-11 01:26:46,152 [wrapper] ==== wrapper stdout END ====
[2025-10-10 21:26:46] 2025-10-11 01:26:46,160 [wrapper] ==== wrapper stderr END ====
[2025-10-10 21:26:46]  *** Error codes and diagnostics ***
[2025-10-10 21:26:46]     "exeErrorCode": 0,
[2025-10-10 21:26:46]     "exeErrorDiag": "",
[2025-10-10 21:26:46]     "pilotErrorCode": 0,
[2025-10-10 21:26:46]     "pilotErrorDiag": "",
[2025-10-10 21:26:46]  *** Listing of results directory ***
[2025-10-10 21:26:46] total 640276
[2025-10-10 21:26:46] drwx------. 4 boincer umatlas      4096 Jul 31 09:00 pilot3
[2025-10-10 21:26:46] -rw-r--r--. 1 boincer umatlas    552446 Oct  2 04:23 pilot3.tar.gz
[2025-10-10 21:26:46] -rw-r--r--. 1 boincer umatlas      5112 Oct  2 04:42 queuedata.json
[2025-10-10 21:26:46] -rwx------. 1 boincer umatlas     36292 Oct  2 04:43 runpilot2-wrapper.sh
[2025-10-10 21:26:46] -rw-r--r--. 1 boincer umatlas       100 Oct 10 14:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 21:26:46] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 14:30 run_atlas
[2025-10-10 21:26:46] -rw-r--r--. 1 boincer umatlas       105 Oct 10 14:30 job.xml
[2025-10-10 21:26:46] -rw-r--r--. 3 boincer umatlas 223559021 Oct 10 14:30 EVNT.46376992._000389.pool.root.1
[2025-10-10 21:26:46] -rw-r--r--. 3 boincer umatlas 223559021 Oct 10 14:30 ATLAS.root_0
[2025-10-10 21:26:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 14:30 start_atlas.sh
[2025-10-10 21:26:46] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 14:30 shared
[2025-10-10 21:26:46] -rw-r--r--. 2 boincer umatlas    565609 Oct 10 14:30 input.tar.gz
[2025-10-10 21:26:46] -rw-r--r--. 1 boincer umatlas         0 Oct 10 14:30 boinc_lockfile
[2025-10-10 21:26:46] -rw-r--r--. 1 boincer umatlas      2555 Oct 10 16:10 pandaJob.out
[2025-10-10 21:26:46] -rw-------. 1 boincer umatlas    975541 Oct 10 16:11 agis_schedconf.cvmfs.json
[2025-10-10 21:26:46] -rw-r--r--. 1 boincer umatlas      6858 Oct 10 21:21 init_data.xml
[2025-10-10 21:26:46] -rw-------. 1 boincer umatlas 198953164 Oct 10 21:25 HITS.46376994._013371.pool.root.1
[2025-10-10 21:26:46] -rw-r--r--. 1 boincer umatlas       531 Oct 10 21:25 boinc_task_state.xml
[2025-10-10 21:26:46] -rw-------. 1 boincer umatlas      1054 Oct 10 21:25 memory_monitor_summary.json
[2025-10-10 21:26:46] -rw-------. 1 boincer umatlas   1560580 Oct 10 21:25 agis_ddmendpoints.agis.ALL.json
[2025-10-10 21:26:46] -rw-------. 1 boincer umatlas    516151 Oct 10 21:25 log.46376994._013371.job.log.tgz.1
[2025-10-10 21:26:46] -rw-------. 1 boincer umatlas        96 Oct 10 21:26 pilot_heartbeat.json
[2025-10-10 21:26:46] -rw-------. 1 boincer umatlas      7844 Oct 10 21:26 heartbeat.json
[2025-10-10 21:26:46] -rw-r--r--. 1 boincer umatlas        28 Oct 10 21:26 wrapper_checkpoint.txt
[2025-10-10 21:26:46] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 21:26 boinc_mmap_file
[2025-10-10 21:26:46] -rw-------. 1 boincer umatlas      4893 Oct 10 21:26 pilotlog.txt
[2025-10-10 21:26:46] -rw-------. 1 boincer umatlas   2324564 Oct 10 21:26 log.46376994._013371.job.log.1
[2025-10-10 21:26:46] -rw-------. 1 boincer umatlas       357 Oct 10 21:26 output.list
[2025-10-10 21:26:46] -rw-r--r--. 1 boincer umatlas       620 Oct 10 21:26 runtime_log
[2025-10-10 21:26:46] -rw-------. 1 boincer umatlas   2856960 Oct 10 21:26 result.tar.gz
[2025-10-10 21:26:46] -rw-r--r--. 1 boincer umatlas      8794 Oct 10 21:26 runtime_log.err
[2025-10-10 21:26:46] -rw-------. 1 boincer umatlas       785 Oct 10 21:26 eM8LDmQ5TO8n9Rq4apOajLDm4fhM0noT9bVof3QYDmN48LDmrp8wcm.diag
[2025-10-10 21:26:46] -rw-r--r--. 1 boincer umatlas     23230 Oct 10 21:26 stderr.txt
[2025-10-10 21:26:46] HITS file was successfully produced:
[2025-10-10 21:26:46] -rw-------. 1 boincer umatlas 198953164 Oct 10 21:25 shared/HITS.pool.root.1
[2025-10-10 21:26:46]  *** Contents of shared directory: ***
[2025-10-10 21:26:46] total 415980
[2025-10-10 21:26:46] -rw-r--r--. 3 boincer umatlas 223559021 Oct 10 14:30 ATLAS.root_0
[2025-10-10 21:26:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 14:30 start_atlas.sh
[2025-10-10 21:26:46] -rw-r--r--. 2 boincer umatlas    565609 Oct 10 14:30 input.tar.gz
[2025-10-10 21:26:46] -rw-------. 1 boincer umatlas 198953164 Oct 10 21:25 HITS.pool.root.1
[2025-10-10 21:26:46] -rw-------. 1 boincer umatlas   2856960 Oct 10 21:26 result.tar.gz
21:26:47 (4181065): run_atlas exited; CPU time 56202.839417
21:26:47 (4181065): called boinc_finish(0)

</stderr_txt>
]]>

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