Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:14:15 (59165): wrapper (7.7.26015): starting
06:14:15 (59165): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 06:14:15] Arguments: --nthreads 4
[2025-10-12 06:14:15] Threads: 4
[2025-10-12 06:14:15] Checking for CVMFS
[2025-10-12 06:14:15] No cvmfs_config command found, will try listing directly
[2025-10-12 06:14:15] CVMFS is ok
[2025-10-12 06:14:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:14:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 06:14:15] Further information can be found at the LHC@home message board.
[2025-10-12 06:14:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:14:15] Checking for apptainer binary...
[2025-10-12 06:14:15] which: no apptainer in ((null))
[2025-10-12 06:14:15] apptainer is not installed, using version from CVMFS
[2025-10-12 06:14:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:14:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-10-12 06:14:15] apptainer works
[2025-10-12 06:14:15] Set ATHENA_PROC_NUMBER=4
[2025-10-12 06:14:15] Set ATHENA_CORE_NUMBER=4
[2025-10-12 06:14:15] Starting ATLAS job with PandaID=6827003325
[2025-10-12 06:14:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:02:56]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:02:56] 2025-10-12 06:54:18,611 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:02:56] 2025-10-12 06:54:18,614 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:02:56] 2025-10-12 06:54:18,614 | INFO     | sum of square deviations: 1199940638.0
[2025-10-12 09:02:56] 2025-10-12 06:54:18,615 | INFO     | sum of deviations: 7068620158.999996
[2025-10-12 09:02:56] 2025-10-12 06:54:18,615 | INFO     | mean x: 1760247267.0
[2025-10-12 09:02:56] 2025-10-12 06:54:18,615 | INFO     | mean y: 2301798.592356688
[2025-10-12 09:02:56] 2025-10-12 06:54:18,616 | INFO     | -- intersect: -10366977249.310719
[2025-10-12 09:02:56] 2025-10-12 06:54:18,616 | INFO     | intersect: -10366977249.310719
[2025-10-12 09:02:56] 2025-10-12 06:54:18,616 | INFO     | chi2: 2.01081390777584
[2025-10-12 09:02:56] 2025-10-12 06:54:18,616 | INFO     | sum of square deviations: 1088905998.0
[2025-10-12 09:02:56] 2025-10-12 06:54:18,617 | INFO     | sum of deviations: 15621184085.000002
[2025-10-12 09:02:56] 2025-10-12 06:54:18,617 | INFO     | mean x: 1760247114.5
[2025-10-12 09:02:56] 2025-10-12 06:54:18,618 | INFO     | mean y: 2313226.947368421
[2025-10-12 09:02:56] 2025-10-12 06:54:18,618 | INFO     | -- intersect: -25249769378.16156
[2025-10-12 09:02:56] 2025-10-12 06:54:18,618 | INFO     | intersect: -25249769378.16156
[2025-10-12 09:02:56] 2025-10-12 06:54:18,618 | INFO     | chi2: 1.3467169760910676
[2025-10-12 09:02:56] 2025-10-12 06:54:18,618 | INFO     | current chi2=1.3467169760910676 (change=33.02627503801829 %)
[2025-10-12 09:02:56] 2025-10-12 06:54:18,618 | INFO     | sum of square deviations: 984941258.0
[2025-10-12 09:02:56] 2025-10-12 06:54:18,619 | INFO     | sum of deviations: 15082105003.000006
[2025-10-12 09:02:56] 2025-10-12 06:54:18,619 | INFO     | mean x: 1760246962.0
[2025-10-12 09:02:56] 2025-10-12 06:54:18,619 | INFO     | mean y: 2312436.394557823
[2025-10-12 09:02:56] 2025-10-12 06:54:18,619 | INFO     | -- intersect: -26951812285.72746
[2025-10-12 09:02:56] 2025-10-12 06:54:18,620 | INFO     | intersect: -26951812285.72746
[2025-10-12 09:02:56] 2025-10-12 06:54:18,620 | INFO     | chi2: 1.3480622528461568
[2025-10-12 09:02:56] 2025-10-12 06:54:18,620 | INFO     | current chi2=1.3480622528461568 (change=-0.09989305689113476 %)
[2025-10-12 09:02:56] 2025-10-12 06:54:18,620 | INFO     | right removable region: 146
[2025-10-12 09:02:56] 2025-10-12 06:54:18,620 | INFO     | sum of square deviations: 1088905998.0
[2025-10-12 09:02:56] 2025-10-12 06:54:18,621 | INFO     | sum of deviations: -12621583718.5
[2025-10-12 09:02:56] 2025-10-12 06:54:18,621 | INFO     | mean x: 1760247419.5
[2025-10-12 09:02:56] 2025-10-12 06:54:18,621 | INFO     | mean y: 2328384.625
[2025-10-12 09:02:56] 2025-10-12 06:54:18,621 | INFO     | -- intersect: 20405476325.125957
[2025-10-12 09:02:56] 2025-10-12 06:54:18,621 | INFO     | intersect: 20405476325.125957
[2025-10-12 09:02:56] 2025-10-12 06:54:18,622 | INFO     | chi2: 0.6897257363463967
[2025-10-12 09:02:56] 2025-10-12 06:54:18,622 | INFO     | current chi2=0.6897257363463967 (change=65.69917615552491 %)
[2025-10-12 09:02:56] 2025-10-12 06:54:18,622 | INFO     | sum of square deviations: 984941258.0
[2025-10-12 09:02:56] 2025-10-12 06:54:18,623 | INFO     | sum of deviations: -12585998484.0
[2025-10-12 09:02:56] 2025-10-12 06:54:18,623 | INFO     | mean x: 1760247572.0
[2025-10-12 09:02:56] 2025-10-12 06:54:18,623 | INFO     | mean y: 2328329.0408163266
[2025-10-12 09:02:56] 2025-10-12 06:54:18,623 | INFO     | -- intersect: 22495520783.627464
[2025-10-12 09:02:56] 2025-10-12 06:54:18,623 | INFO     | intersect: 22495520783.627464
[2025-10-12 09:02:56] 2025-10-12 06:54:18,623 | INFO     | chi2: 0.6891610043087555
[2025-10-12 09:02:56] 2025-10-12 06:54:18,623 | INFO     | current chi2=0.6891610043087555 (change=0.08187776791289086 %)
[2025-10-12 09:02:56] 2025-10-12 06:54:18,623 | INFO     | left removable region: 20
[2025-10-12 09:02:56] 2025-10-12 06:54:18,624 | INFO     | sum of square deviations: 620244187.5
[2025-10-12 09:02:56] 2025-10-12 06:54:18,624 | INFO     | sum of deviations: -3239252164.5
[2025-10-12 09:02:56] 2025-10-12 06:54:18,624 | INFO     | mean x: 1760247541.5
[2025-10-12 09:02:56] 2025-10-12 06:54:18,625 | INFO     | mean y: 2340562.1666666665
[2025-10-12 09:02:56] 2025-10-12 06:54:18,625 | INFO     | -- intersect: 9195309676.221731
[2025-10-12 09:02:56] 2025-10-12 06:54:18,625 | INFO     | intersect: 9195309676.221731
[2025-10-12 09:02:56] 2025-10-12 06:54:18,625 | INFO     | chi2: 0.003908295166103023
[2025-10-12 09:02:56] 2025-10-12 06:54:18,625 | INFO     | -- intersect: 9195309676.221731
[2025-10-12 09:02:56] 2025-10-12 06:54:18,625 | INFO     | current memory leak: -5.22 B/s (using 126 data points, chi2=0.00)
[2025-10-12 09:02:56] 2025-10-12 06:54:18,626 | INFO     | could have reported an average CPU frequency of 2734 MHz (9 samples)
[2025-10-12 09:02:56] 2025-10-12 06:54:18,626 | INFO     | ..............................
[2025-10-12 09:02:56] 2025-10-12 06:54:18,626 | INFO     | . Timing measurements:
[2025-10-12 09:02:56] 2025-10-12 06:54:18,626 | INFO     | . get job = 0 s
[2025-10-12 09:02:56] 2025-10-12 06:54:18,626 | INFO     | . initial setup = 1 s
[2025-10-12 09:02:56] 2025-10-12 06:54:18,626 | INFO     | . payload setup = 9 s
[2025-10-12 09:02:56] 2025-10-12 06:54:18,626 | INFO     | . stage-in = 0 s
[2025-10-12 09:02:56] 2025-10-12 06:54:18,626 | INFO     | . payload execution = 9544 s
[2025-10-12 09:02:56] 2025-10-12 06:54:18,626 | INFO     | . stage-out = 0 s
[2025-10-12 09:02:56] 2025-10-12 06:54:18,626 | INFO     | . log creation = 0 s
[2025-10-12 09:02:56] 2025-10-12 06:54:18,627 | INFO     | ..............................
[2025-10-12 09:02:56] 2025-10-12 06:54:18,721 | INFO     | 
[2025-10-12 09:02:56] 2025-10-12 06:54:18,722 | INFO     | job summary report
[2025-10-12 09:02:56] 2025-10-12 06:54:18,722 | INFO     | --------------------------------------------------
[2025-10-12 09:02:56] 2025-10-12 06:54:18,722 | INFO     | PanDA job id: 6827003325
[2025-10-12 09:02:56] 2025-10-12 06:54:18,723 | INFO     | task id: 46376994
[2025-10-12 09:02:56] 2025-10-12 06:54:18,723 | INFO     | errors: (none)
[2025-10-12 09:02:56] 2025-10-12 06:54:18,723 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:02:56] 2025-10-12 06:54:18,723 | INFO     | pilot state: finished 
[2025-10-12 09:02:56] 2025-10-12 06:54:18,723 | INFO     | transexitcode: 0
[2025-10-12 09:02:56] 2025-10-12 06:54:18,723 | INFO     | exeerrorcode: 0
[2025-10-12 09:02:56] 2025-10-12 06:54:18,723 | INFO     | exeerrordiag: 
[2025-10-12 09:02:56] 2025-10-12 06:54:18,723 | INFO     | exitcode: 0
[2025-10-12 09:02:56] 2025-10-12 06:54:18,723 | INFO     | exitmsg: OK
[2025-10-12 09:02:56] 2025-10-12 06:54:18,723 | INFO     | cpuconsumptiontime: 37310 s
[2025-10-12 09:02:56] 2025-10-12 06:54:18,724 | INFO     | nevents: 400
[2025-10-12 09:02:56] 2025-10-12 06:54:18,724 | INFO     | neventsw: 0
[2025-10-12 09:02:56] 2025-10-12 06:54:18,724 | INFO     | pid: 92517
[2025-10-12 09:02:56] 2025-10-12 06:54:18,724 | INFO     | pgrp: 92517
[2025-10-12 09:02:56] 2025-10-12 06:54:18,724 | INFO     | corecount: 4
[2025-10-12 09:02:56] 2025-10-12 06:54:18,724 | INFO     | event service: False
[2025-10-12 09:02:56] 2025-10-12 06:54:18,724 | INFO     | sizes: {0: 2348707, 1: 2348906, 8: 2349168, 12: 2349196, 9558: 2377945, 9560: 2387151, 9567: 2387353}
[2025-10-12 09:02:56] 2025-10-12 06:54:18,724 | INFO     | --------------------------------------------------
[2025-10-12 09:02:56] 2025-10-12 06:54:18,724 | INFO     | 
[2025-10-12 09:02:56] 2025-10-12 06:54:18,724 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-10-12 09:02:56] 2025-10-12 06:54:18,758 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:02:56] 2025-10-12 06:54:18,758 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:02:56] 2025-10-12 06:54:18,759 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:02:56] 2025-10-12 06:54:18,759 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:02:56] 2025-10-12 06:54:18,759 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:02:56] 2025-10-12 06:54:18,759 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:02:56] 2025-10-12 06:54:18,759 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:02:56] 2025-10-12 06:54:18,759 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:02:56] 2025-10-12 06:54:18,759 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:02:56] 2025-10-12 06:54:18,759 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:02:56] 2025-10-12 06:54:18,759 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:02:56] 2025-10-12 06:54:18,760 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:02:56] 2025-10-12 06:54:18,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:02:56] 2025-10-12 06:54:18,760 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:02:56] 2025-10-12 06:54:18,760 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:02:56] 2025-10-12 06:54:18,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:02:56] 2025-10-12 06:54:18,760 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:02:56] 2025-10-12 06:54:18,760 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:02:56] 2025-10-12 06:54:18,760 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:02:56] 2025-10-12 06:54:18,760 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:02:56] 2025-10-12 06:54:18,760 | INFO     | job 6827003325 has completed (purged errors)
[2025-10-12 09:02:56] 2025-10-12 06:54:18,761 | INFO     | overall cleanup function is called
[2025-10-12 09:02:56] 2025-10-12 06:54:18,901 | INFO     | PID=69235 has CPU usage=22.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 09:02:56] 2025-10-12 06:54:18,901 | INFO     | .. there are 5 such processes running
[2025-10-12 09:02:56] 2025-10-12 06:54:19,773 | INFO     | --- collectZombieJob: --- 10, [92517]
[2025-10-12 09:02:56] 2025-10-12 06:54:19,773 | INFO     | zombie collector waiting for pid 92517
[2025-10-12 09:02:56] 2025-10-12 06:54:19,773 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:02:56] 2025-10-12 06:54:19,774 | INFO     | collected zombie processes
[2025-10-12 09:02:56] 2025-10-12 06:54:19,774 | INFO     | will attempt to kill all subprocesses of pid=92517
[2025-10-12 09:02:56] 2025-10-12 06:54:20,480 | INFO     | process IDs to be killed: [92517] (in reverse order)
[2025-10-12 09:02:56] 2025-10-12 06:54:20,699 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:02:56] 2025-10-12 06:54:20,699 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:02:56] 2025-10-12 06:54:20,729 | INFO     | did not find any defunct processes belonging to 92517
[2025-10-12 09:02:56] 2025-10-12 06:54:20,758 | INFO     | did not find any defunct processes belonging to 92517
[2025-10-12 09:02:56] 2025-10-12 06:54:20,758 | INFO     | ready for new job
[2025-10-12 09:02:56] 2025-10-12 06:54:20,758 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:02:56] 2025-10-12 06:54:20,761 | INFO     | ***************************************
[2025-10-12 09:02:56] 2025-10-12 06:54:20,764 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 09:02:56] 2025-10-12 06:54:20,764 | INFO     | ***************************************
[2025-10-12 09:02:56] 2025-10-12 06:54:20,764 | INFO     | 
[2025-10-12 09:02:56] 2025-10-12 06:54:20,773 | INFO     | architecture information:
[2025-10-12 09:02:56] 2025-10-12 06:54:20,773 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:02:56] 2025-10-12 06:54:20,796 | INFO     | cat /etc/os-release:
[2025-10-12 09:02:56] NAME="CentOS Linux"
[2025-10-12 09:02:56] VERSION="7 (Core)"
[2025-10-12 09:02:56] ID="centos"
[2025-10-12 09:02:56] ID_LIKE="rhel fedora"
[2025-10-12 09:02:56] VERSION_ID="7"
[2025-10-12 09:02:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:02:56] ANSI_COLOR="0;31"
[2025-10-12 09:02:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:02:56] HOME_URL="https://www.centos.org/"
[2025-10-12 09:02:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:02:56] 
[2025-10-12 09:02:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:02:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:02:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:02:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:02:56] 
[2025-10-12 09:02:56] 2025-10-12 06:54:20,796 | INFO     | ***************************************
[2025-10-12 09:02:56] 2025-10-12 06:54:21,299 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-10-12 09:02:56] 2025-10-12 06:54:21,325 | INFO     | sufficient remaining disk space (3337616359424 B)
[2025-10-12 09:02:56] 2025-10-12 06:54:21,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:02:56] 2025-10-12 06:54:21,326 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:02:56] 2025-10-12 06:54:21,326 | INFO     | update_server=False
[2025-10-12 09:02:56] 2025-10-12 06:54:21,326 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:02:56] 2025-10-12 06:54:21,345 | INFO     | all job control threads have been joined
[2025-10-12 09:02:56] 2025-10-12 06:54:21,533 | INFO     | all data control threads have been joined
[2025-10-12 09:02:56] 2025-10-12 06:54:21,866 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:02:56] 2025-10-12 06:54:21,866 | INFO     | aborting loop
[2025-10-12 09:02:56] 2025-10-12 06:54:21,915 | INFO     | all payload control threads have been joined
[2025-10-12 09:02:56] 2025-10-12 06:54:22,002 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:02:56] 2025-10-12 06:54:22,331 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:02:56] 2025-10-12 06:54:22,351 | INFO     | [job] control thread has finished
[2025-10-12 09:02:56] 2025-10-12 06:54:22,477 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:02:56] 2025-10-12 06:54:22,525 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:02:56] 2025-10-12 06:54:22,533 | INFO     | [job] validate thread has finished
[2025-10-12 09:02:56] 2025-10-12 06:54:22,538 | INFO     | [data] control thread has finished
[2025-10-12 09:02:56] 2025-10-12 06:54:22,654 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:02:56] 2025-10-12 06:54:22,708 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:02:56] 2025-10-12 06:54:22,837 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:02:56] 2025-10-12 06:54:22,871 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:02:56] 2025-10-12 06:54:22,921 | INFO     | [payload] control thread has finished
[2025-10-12 09:02:56] 2025-10-12 06:54:22,925 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:02:56] 2025-10-12 06:54:23,097 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:02:56] 2025-10-12 06:54:23,591 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:02:56] 2025-10-12 06:54:23,728 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:02:56] 2025-10-12 06:54:24,007 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:02:56] 2025-10-12 06:54:24,730 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:02:56] 2025-10-12 06:54:26,844 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:02:56] 2025-10-12 06:54:47,613 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:02:56] 2025-10-12 06:54:48,220 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22790311573312)>', '<ExcThread(monitor, started 22790059005696)>']
[2025-10-12 09:02:56] 2025-10-12 06:54:51,912 | INFO     | PID=69235 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 09:02:56] 2025-10-12 06:54:51,912 | INFO     | .. there are 5 such processes running
[2025-10-12 09:02:56] 2025-10-12 06:54:51,913 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:02:56] 2025-10-12 06:54:51,913 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:02:56] 2025-10-12 06:54:51,913 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:02:56] 2025-10-12 06:54:51,913 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:02:56] 2025-10-12 06:54:51,913 | INFO     | [monitor] control thread has ended
[2025-10-12 09:02:56] 2025-10-12 06:54:53,246 | INFO     | all workflow threads have been joined
[2025-10-12 09:02:56] 2025-10-12 06:54:53,246 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:02:56] 2025-10-12 06:54:53,247 | INFO     | traces error code: 0
[2025-10-12 09:02:56] 2025-10-12 06:54:53,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:02:56] 2025-10-12 06:54:53,429 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:02:56] 2025-10-12 06:54:53,433 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:02:56] 2025-10-12 06:54:53,437 [wrapper] pilotpid: 69235
[2025-10-12 09:02:56] 2025-10-12 06:54:53,440 [wrapper] Pilot exit status: 0
[2025-10-12 09:02:56] 2025-10-12 06:54:53,452 [wrapper] pandaids: 6827003325
[2025-10-12 09:02:56] 2025-10-12 06:54:53,613 [wrapper] cleanup supervisor_pilot  398881 69237
[2025-10-12 09:02:56] 2025-10-12 06:54:53,617 [wrapper] Test setup, not cleaning
[2025-10-12 09:02:56] 2025-10-12 06:54:53,621 [wrapper] apfmon messages muted
[2025-10-12 09:02:56] 2025-10-12 06:54:53,624 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:02:56] 2025-10-12 06:54:53,628 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:02:56]  *** Error codes and diagnostics ***
[2025-10-12 09:02:56]     "exeErrorCode": 0,
[2025-10-12 09:02:56]     "exeErrorDiag": "",
[2025-10-12 09:02:56]     "pilotErrorCode": 0,
[2025-10-12 09:02:56]     "pilotErrorDiag": "",
[2025-10-12 09:02:56]  *** Listing of results directory ***
[2025-10-12 09:02:56] total 418464
[2025-10-12 09:02:56] -rw-r--r-- 1 boinc boinc    552446 Oct  2 10:23 pilot3.tar.gz
[2025-10-12 09:02:56] -rw-r--r-- 1 boinc boinc      5112 Oct  2 10:39 queuedata.json
[2025-10-12 09:02:56] -rwx------ 1 boinc boinc     36292 Oct  2 10:41 runpilot2-wrapper.sh
[2025-10-12 09:02:56] -rw-r--r-- 1 boinc boinc       100 Oct 12 06:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:02:56] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 06:14 run_atlas
[2025-10-12 09:02:56] -rw-r--r-- 1 boinc boinc       105 Oct 12 06:14 job.xml
[2025-10-12 09:02:56] -rw-r--r-- 1 boinc boinc      6688 Oct 12 06:14 init_data.xml
[2025-10-12 09:02:56] -rw-r--r-- 2 boinc boinc 224552730 Oct 12 06:14 EVNT.46376992._000387.pool.root.1
[2025-10-12 09:02:56] -rw-r--r-- 2 boinc boinc     15120 Oct 12 06:14 start_atlas.sh
[2025-10-12 09:02:56] drwxrwx--x 2 boinc boinc      4096 Oct 12 06:14 shared
[2025-10-12 09:02:56] -rw-r--r-- 2 boinc boinc    565610 Oct 12 06:14 input.tar.gz
[2025-10-12 09:02:56] -rw-r--r-- 1 boinc boinc         0 Oct 12 06:14 boinc_lockfile
[2025-10-12 09:02:56] -rw-r--r-- 1 boinc boinc      2558 Oct 12 06:14 pandaJob.out
[2025-10-12 09:02:56] -rw------- 1 boinc boinc    975512 Oct 12 06:14 agis_schedconf.cvmfs.json
[2025-10-12 09:02:56] -rw------- 1 boinc boinc   1560580 Oct 12 06:14 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:02:56] drwx------ 4 boinc boinc      4096 Oct 12 06:14 pilot3
[2025-10-12 09:02:56] -rw------- 1 boinc boinc 196701715 Oct 12 08:53 HITS.46376994._013344.pool.root.1
[2025-10-12 09:02:56] -rw-r--r-- 1 boinc boinc       528 Oct 12 08:54 boinc_task_state.xml
[2025-10-12 09:02:56] -rw------- 1 boinc boinc      1024 Oct 12 08:54 memory_monitor_summary.json
[2025-10-12 09:02:56] -rw------- 1 boinc boinc        95 Oct 12 08:54 pilot_heartbeat.json
[2025-10-12 09:02:56] -rw------- 1 boinc boinc    347653 Oct 12 08:54 log.46376994._013344.job.log.tgz.1
[2025-10-12 09:02:56] -rw------- 1 boinc boinc      7783 Oct 12 08:54 heartbeat.json
[2025-10-12 09:02:56] -rw------- 1 boinc boinc      4833 Oct 12 08:54 pilotlog.txt
[2025-10-12 09:02:56] -rw------- 1 boinc boinc   1332951 Oct 12 08:54 log.46376994._013344.job.log.1
[2025-10-12 09:02:56] -rw------- 1 boinc boinc       357 Oct 12 08:54 output.list
[2025-10-12 09:02:56] -rw-r--r-- 1 boinc boinc       620 Oct 12 08:54 runtime_log
[2025-10-12 09:02:56] -rw------- 1 boinc boinc   1699840 Oct 12 08:54 result.tar.gz
[2025-10-12 09:02:56] -rw-r--r-- 1 boinc boinc      9084 Oct 12 08:54 runtime_log.err
[2025-10-12 09:02:56] -rw------- 1 boinc boinc       662 Oct 12 08:54 MFRODmI3TO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3FENDm5hbRVm.diag
[2025-10-12 09:02:56] -rw-r--r-- 1 boinc boinc        25 Oct 12 09:02 wrapper_checkpoint.txt
[2025-10-12 09:02:56] -rw-r--r-- 1 boinc boinc      8192 Oct 12 09:02 boinc_mmap_file
[2025-10-12 09:02:56] -rw-r--r-- 1 boinc boinc     20749 Oct 12 09:02 stderr.txt
[2025-10-12 09:02:56] HITS file was successfully produced:
[2025-10-12 09:02:56] -rw------- 1 boinc boinc 196701715 Oct 12 08:53 shared/HITS.pool.root.1
[2025-10-12 09:02:56]  *** Contents of shared directory: ***
[2025-10-12 09:02:56] total 413624
[2025-10-12 09:02:56] -rw-r--r-- 2 boinc boinc 224552730 Oct 12 06:14 ATLAS.root_0
[2025-10-12 09:02:56] -rw-r--r-- 2 boinc boinc     15120 Oct 12 06:14 start_atlas.sh
[2025-10-12 09:02:56] -rw-r--r-- 2 boinc boinc    565610 Oct 12 06:14 input.tar.gz
[2025-10-12 09:02:56] -rw------- 1 boinc boinc 196701715 Oct 12 08:53 HITS.pool.root.1
[2025-10-12 09:02:56] -rw------- 1 boinc boinc   1699840 Oct 12 08:54 result.tar.gz
09:02:57 (59165): run_atlas exited; CPU time 37934.175408
09:02:57 (59165): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN