Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-14 20:56:11 (8312): vboxwrapper version 26210
2025-10-14 20:56:11 (8312): BOINC client version: 8.2.4
2025-10-14 20:56:13 (8312): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2025-10-14 20:56:14 (8312): Successfully copied 'init_data.xml' to the shared directory.
2025-10-14 20:56:14 (8312): Create VM. (boinc_63e032f198ab6ed6, slot#6)
2025-10-14 20:56:14 (8312): Setting Memory Size for VM. (4600MB)
2025-10-14 20:56:15 (8312): Setting CPU Count for VM. (6)
2025-10-14 20:56:15 (8312): Setting Chipset Options for VM.
2025-10-14 20:56:15 (8312): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-14 20:56:16 (8312): Setting Boot Options for VM.
2025-10-14 20:56:16 (8312): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-14 20:56:16 (8312): Enabling VM Network Access.
2025-10-14 20:56:17 (8312): Disabling USB Support for VM.
2025-10-14 20:56:17 (8312): Disabling COM Port Support for VM.
2025-10-14 20:56:17 (8312): Disabling LPT Port Support for VM.
2025-10-14 20:56:18 (8312): Disabling Audio Support for VM.
2025-10-14 20:56:18 (8312): Disabling Clipboard Support for VM.
2025-10-14 20:56:18 (8312): Disabling Drag and Drop Support for VM.
2025-10-14 20:56:19 (8312): Adding storage controller(s) to VM.
2025-10-14 20:56:19 (8312): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-14 20:56:21 (8312): Adding VirtualBox Guest Additions to VM.
2025-10-14 20:56:22 (8312): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-14 20:56:22 (8312): forwarding host port 60424 to guest port 80
2025-10-14 20:56:22 (8312): Enabling remote desktop for VM.
2025-10-14 20:56:22 (8312): Required extension pack not installed, remote desktop not enabled.
2025-10-14 20:56:22 (8312): Enabling shared directory for VM.
2025-10-14 20:56:23 (8312): Starting VM using VBoxManage interface. (boinc_63e032f198ab6ed6, slot#6)
2025-10-14 20:56:32 (8312): Successfully started VM. (PID = '9468')
2025-10-14 20:56:32 (8312): Reporting VM Process ID to BOINC.
2025-10-14 20:56:32 (8312): Guest Log: BIOS: VirtualBox 7.0.20
2025-10-14 20:56:32 (8312): Guest Log: CPUID EDX: 0x178bfbff
2025-10-14 20:56:32 (8312): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-14 20:56:32 (8312): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-14 20:56:32 (8312): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-14 20:56:32 (8312): Detected: Web Application Enabled (http://localhost:60424)
2025-10-14 20:56:32 (8312): Preference change detected
2025-10-14 20:56:32 (8312): Setting CPU throttle for VM. (100%)
2025-10-14 20:56:33 (8312): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-14 20:56:34 (8312): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-14 20:56:34 (8312): Guest Log: BIOS: Booting from Hard Disk...
2025-10-14 20:56:38 (8312): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-14 20:56:38 (8312): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-14 20:56:38 (8312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-14 20:56:53 (8312): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-14 20:56:53 (8312): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-14 20:57:15 (8312): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-14 20:57:15 (8312): Guest Log: 00:00:00.000183 main     Log opened 2025-10-14T20:57:12.989585000Z
2025-10-14 20:57:15 (8312): Guest Log: 00:00:00.000285 main     OS Product: Linux
2025-10-14 20:57:15 (8312): Guest Log: 00:00:00.000322 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-14 20:57:15 (8312): Guest Log: 00:00:00.000353 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-14 20:57:15 (8312): Guest Log: 00:00:00.000391 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-14 20:57:15 (8312): Guest Log: 00:00:00.000392 main     Process ID: 1359
2025-10-14 20:57:15 (8312): Guest Log: 00:00:00.000393 main     Package type: LINUX_64BITS_GENERIC
2025-10-14 20:57:15 (8312): Guest Log: 00:00:00.001333 main     5.2.32 r132073 started. Verbose level = 0
2025-10-14 20:57:16 (8312): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-14 20:57:16 (8312): Guest Log: [INFO] Mounting shared directory
2025-10-14 20:57:16 (8312): Guest Log: [INFO] Checking for init_data.xml
2025-10-14 20:57:20 (8312): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-14 20:57:20 (8312): Guest Log: [INFO] Detected branch: prod
2025-10-14 20:57:21 (8312): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-14 20:57:21 (8312): Guest Log: Copying input files
2025-10-14 20:57:22 (8312): Guest Log: Copied input files into RunAtlas.
2025-10-14 20:57:22 (8312): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-14 20:57:22 (8312): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-14 20:57:22 (8312): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-14 20:57:22 (8312): Guest Log: Further information can be found at the LHC@home message board.
2025-10-14 20:57:25 (8312): Guest Log: 00:00:10.003325 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 169 808 000ns (GuestNow=1 760 464 644 822 433 000 ns GuestLast=1 760 475 432 992 241 000 ns fSetTimeLastLoop=true )
2025-10-14 20:57:40 (8312): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-14 20:57:40 (8312): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-14 20:57:40 (8312): Guest Log: 2.6.3.0 1634 0 30156 151705 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-14 20:57:45 (8312): Guest Log: copied the webapp to /var/www
2025-10-14 20:57:45 (8312): Guest Log: ATHENA_PROC_NUMBER=6
2025-10-14 20:57:45 (8312): Guest Log: ATHENA_CORE_NUMBER=6
2025-10-14 20:57:46 (8312): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-14 20:57:46 (8312): Guest Log:  *** Starting ATLAS job. (PandaID=6827003302 taskID=46376994) ***
2025-10-14 22:42:25 (8312): Status Report: Elapsed Time: '6000.476070'
2025-10-14 22:42:25 (8312): Status Report: CPU Time: '32225.391772'
2025-10-15 00:30:07 (8312): Status Report: Elapsed Time: '12001.236757'
2025-10-15 00:30:07 (8312): Status Report: CPU Time: '67765.102789'
2025-10-15 01:26:46 (8312): Guest Log:  *** Job finished ***
2025-10-15 01:26:46 (8312): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:29,005 | INFO     | all workflow threads have been joined
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:29,005 | INFO     | end of generic workflow (traces error code: 0)
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:29,005 | INFO     | traces error code: 0
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:29,005 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:41,638 | INFO     | PID=6037 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:41,639 | INFO     | found 0 job(s) in 20 queues
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:41,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:41,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:41,639 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:41,640 | INFO     | [monitor] control thread has ended
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:41,978 [wrapper] ==== pilot stdout END ====
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:41,984 [wrapper] ==== wrapper stdout RESUME ====
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:41,989 [wrapper] pilotpid: 6037
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:41,995 [wrapper] Pilot exit status: 0
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:42,101 [wrapper] pandaids: 6827003302
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:42,140 [wrapper] cleanup supervisor_pilot 14858 6038
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:42,148 [wrapper] Test setup, not cleaning
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:42,154 [wrapper] apfmon messages muted
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:42,160 [wrapper] ==== wrapper stdout END ====
2025-10-15 01:26:46 (8312): Guest Log: 2025-10-14 22:26:42,166 [wrapper] ==== wrapper stderr END ====
2025-10-15 01:26:46 (8312): Guest Log:  *** Error codes and diagnostics ***
2025-10-15 01:26:46 (8312): Guest Log:     "exeErrorCode": 0,
2025-10-15 01:26:46 (8312): Guest Log:     "exeErrorDiag": "",
2025-10-15 01:26:46 (8312): Guest Log:     "pilotErrorCode": 0,
2025-10-15 01:26:46 (8312): Guest Log:     "pilotErrorDiag": "",
2025-10-15 01:26:46 (8312): Guest Log:  *** Listing of results directory ***
2025-10-15 01:26:46 (8312): Guest Log: total 205828
2025-10-15 01:26:46 (8312): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  2 08:23 pilot3.tar.gz
2025-10-15 01:26:46 (8312): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  2 08:38 queuedata.json
2025-10-15 01:26:46 (8312): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  2 08:38 runpilot2-wrapper.sh
2025-10-15 01:26:46 (8312): Guest Log: -rwxr-xr-x. 1 atlas atlas      8554 Oct 14 17:57 init_data.xml
2025-10-15 01:26:46 (8312): Guest Log: -rwxr-xr-x. 1 atlas atlas    565614 Oct 14 17:57 input.tar.gz
2025-10-15 01:26:46 (8312): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 14 17:57 start_atlas.sh
2025-10-15 01:26:46 (8312): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 14 17:57 EVNT.46376992._000387.pool.root.1 -> /data/./ATLAS.root_0
2025-10-15 01:26:46 (8312): Guest Log: -rw-r--r--. 1 atlas atlas      2554 Oct 14 17:57 pandaJob.out
2025-10-15 01:26:46 (8312): Guest Log: -rw-------. 1 atlas atlas    973983 Oct 14 17:58 agis_schedconf.cvmfs.json
2025-10-15 01:26:46 (8312): Guest Log: drwx------. 4 atlas atlas      4096 Oct 14 17:59 pilot3
2025-10-15 01:26:46 (8312): Guest Log: -rw-------. 1 atlas atlas 201933719 Oct 14 22:25 HITS.46376994._013321.pool.root.1
2025-10-15 01:26:46 (8312): Guest Log: -rw-------. 1 atlas atlas      1033 Oct 14 22:25 memory_monitor_summary.json
2025-10-15 01:26:46 (8312): Guest Log: -rw-------. 1 atlas atlas   1560740 Oct 14 22:25 agis_ddmendpoints.agis.ALL.json
2025-10-15 01:26:46 (8312): Guest Log: -rw-------. 1 atlas atlas    430251 Oct 14 22:25 log.46376994._013321.job.log.tgz.1
2025-10-15 01:26:46 (8312): Guest Log: -rw-------. 1 atlas atlas      7813 Oct 14 22:26 heartbeat.json
2025-10-15 01:26:46 (8312): Guest Log: -rw-------. 1 atlas atlas       744 Oct 14 22:26 pilotlog.txt
2025-10-15 01:26:46 (8312): Guest Log: -rw-------. 1 atlas atlas        95 Oct 14 22:26 pilot_heartbeat.json
2025-10-15 01:26:46 (8312): Guest Log: -rw-------. 1 atlas atlas   2076559 Oct 14 22:26 log.46376994._013321.job.log.1
2025-10-15 01:26:46 (8312): Guest Log: -rw-------. 1 atlas atlas       357 Oct 14 22:26 output.list
2025-10-15 01:26:46 (8312): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 14 22:26 runtime_log
2025-10-15 01:26:46 (8312): Guest Log: -rw-------. 1 atlas atlas   2529280 Oct 14 22:26 result.tar.gz
2025-10-15 01:26:46 (8312): Guest Log: -rw-r--r--. 1 atlas atlas      8664 Oct 14 22:26 runtime_log.err
2025-10-15 01:26:46 (8312): Guest Log: -rw-------. 1 atlas atlas       666 Oct 14 22:26 PojMDmw0TO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqFENDmWcGTEm.diag
2025-10-15 01:26:46 (8312): Guest Log: Looking for outputfile HITS.46376994._013321.pool.root.1
2025-10-15 01:26:46 (8312): Guest Log: HITS file was successfully produced
2025-10-15 01:26:46 (8312): Guest Log: -rw-------. 1 atlas atlas 201933719 Oct 14 22:25 /home/atlas/RunAtlas/HITS.46376994._013321.pool.root.1
2025-10-15 01:26:47 (8312): Guest Log: Successfully finished the ATLAS job!
2025-10-15 01:26:47 (8312): Guest Log: Copying the results back to the shared directory!
2025-10-15 01:26:47 (8312): Guest Log:  *** Contents of shared directory: ***
2025-10-15 01:26:47 (8312): Guest Log: total 419448
2025-10-15 01:26:47 (8312): Guest Log: -rwxrwxrwx. 1 root root 224552730 Oct 14 17:56 ATLAS.root_0
2025-10-15 01:26:47 (8312): Guest Log: -rwxrwxrwx. 1 root root 201933719 Oct 14 22:26 HITS.pool.root.1
2025-10-15 01:26:47 (8312): Guest Log: -rwxrwxrwx. 1 root root      8554 Oct 14 17:56 init_data.xml
2025-10-15 01:26:47 (8312): Guest Log: -rwxrwxrwx. 1 root root    565614 Oct 10 17:49 input.tar.gz
2025-10-15 01:26:47 (8312): Guest Log: -rwxrwxrwx. 1 root root   2529280 Oct 14 22:26 result.tar.gz
2025-10-15 01:26:47 (8312): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 10 17:49 start_atlas.sh
2025-10-15 01:26:47 (8312): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-15 01:26:47 (8312): VM Completion File Detected.
2025-10-15 01:26:47 (8312): Powering off VM.
2025-10-15 01:26:48 (8312): Successfully stopped VM.
2025-10-15 01:26:48 (8312): Deregistering VM. (boinc_63e032f198ab6ed6, slot#6)
2025-10-15 01:26:48 (8312): Removing network bandwidth throttle group from VM.
2025-10-15 01:26:49 (8312): Removing VM from VirtualBox.
2025-10-15 01:26:54 (8312): called boinc_finish(0)

</stderr_txt>
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