Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:09:18 (4150524): wrapper (7.7.26015): starting
17:09:18 (4150524): wrapper: running run_atlas (--nthreads 10)
[2025-10-10 17:09:19] Arguments: --nthreads 10
[2025-10-10 17:09:19] Threads: 10
[2025-10-10 17:09:19] Checking for CVMFS
[2025-10-10 17:09:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 17:09:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 17:09:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 17:09:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 17:09:19] 2.13.2.0 4486 33249 390412 151560 3 258 38866671 39288833 9045 16776704 0 54076845 99.527 64990581 31860 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 17:09:19] CVMFS is ok
[2025-10-10 17:09:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 17:09:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 17:09:19] Further information can be found at the LHC@home message board.
[2025-10-10 17:09:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 17:09:19] Checking for apptainer binary...
[2025-10-10 17:09:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 17:09:19] Running /usr/bin/apptainer --version
[2025-10-10 17:09:19] apptainer version 1.4.3-1.el9
[2025-10-10 17:09:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 17:09:19] c-211-25.aglt2.org
[2025-10-10 17:09:19] apptainer works
[2025-10-10 17:09:19] Set ATHENA_PROC_NUMBER=10
[2025-10-10 17:09:19] Set ATHENA_CORE_NUMBER=10
[2025-10-10 17:09:19] Starting ATLAS job with PandaID=6837629102
[2025-10-10 17:09:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:40:13 (1276104): wrapper (7.7.26015): starting
19:40:13 (1276104): wrapper: running run_atlas (--nthreads 10)
[2025-10-10 19:40:13] Arguments: --nthreads 10
[2025-10-10 19:40:13] Threads: 10
[2025-10-10 19:40:13] This job has been restarted, cleaning up previous attempt
[2025-10-10 19:40:13] Checking for CVMFS
[2025-10-10 19:40:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 19:40:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 19:40:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 19:40:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 19:40:13] 2.13.2.0 4486 33399 388948 151565 0 265 28081284 39288833 9261 16776704 0 54434544 99.515 67222510 31792 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 19:40:13] CVMFS is ok
[2025-10-10 19:40:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 19:40:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 19:40:13] Further information can be found at the LHC@home message board.
[2025-10-10 19:40:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 19:40:13] Checking for apptainer binary...
[2025-10-10 19:40:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 19:40:13] Running /usr/bin/apptainer --version
[2025-10-10 19:40:13] apptainer version 1.4.3-1.el9
[2025-10-10 19:40:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 19:40:13] c-211-25.aglt2.org
[2025-10-10 19:40:13] apptainer works
[2025-10-10 19:40:14] Set ATHENA_PROC_NUMBER=10
[2025-10-10 19:40:14] Set ATHENA_CORE_NUMBER=10
[2025-10-10 19:40:14] Starting ATLAS job with PandaID=6837629102
[2025-10-10 19:40:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 07:59:04]  *** The last 200 lines of the pilot log: ***
[2025-10-11 07:59:04] 2025-10-11 11:57:55,477 | INFO     | fitting pss+swap vs Time
[2025-10-11 07:59:04] 2025-10-11 11:57:55,479 | INFO     | sum of square deviations: 118163007550.00752
[2025-10-11 07:59:04] 2025-10-11 11:57:55,520 | INFO     | sum of deviations: 17125682786.442734
[2025-10-11 07:59:04] 2025-10-11 11:57:55,520 | INFO     | mean x: 1760161737.2924137
[2025-10-11 07:59:04] 2025-10-11 11:57:55,520 | INFO     | mean y: 2594657.644137931
[2025-10-11 07:59:04] 2025-10-11 11:57:55,521 | INFO     | -- intersect: -252510321.407336
[2025-10-11 07:59:04] 2025-10-11 11:57:55,521 | INFO     | intersect: -252510321.407336
[2025-10-11 07:59:04] 2025-10-11 11:57:55,522 | INFO     | chi2: 3.6787132485503755
[2025-10-11 07:59:04] 2025-10-11 11:57:55,523 | INFO     | sum of square deviations: 115735082499.5777
[2025-10-11 07:59:04] 2025-10-11 11:57:55,539 | INFO     | sum of deviations: 158612962261.04425
[2025-10-11 07:59:04] 2025-10-11 11:57:55,540 | INFO     | mean x: 1760161584.7944446
[2025-10-11 07:59:04] 2025-10-11 11:57:55,540 | INFO     | mean y: 2603519.061111111
[2025-10-11 07:59:04] 2025-10-11 11:57:55,540 | INFO     | -- intersect: -2409667997.8608193
[2025-10-11 07:59:04] 2025-10-11 11:57:55,540 | INFO     | intersect: -2409667997.8608193
[2025-10-11 07:59:04] 2025-10-11 11:57:55,542 | INFO     | chi2: 1.5600895834365736
[2025-10-11 07:59:04] 2025-10-11 11:57:55,542 | INFO     | current chi2=1.5600895834365736 (change=57.59143270948507 %)
[2025-10-11 07:59:04] 2025-10-11 11:57:55,543 | INFO     | sum of square deviations: 113340646449.14104
[2025-10-11 07:59:04] 2025-10-11 11:57:55,559 | INFO     | sum of deviations: 156284980177.88235
[2025-10-11 07:59:04] 2025-10-11 11:57:55,559 | INFO     | mean x: 1760161432.2965035
[2025-10-11 07:59:04] 2025-10-11 11:57:55,560 | INFO     | mean y: 2603370.793006993
[2025-10-11 07:59:04] 2025-10-11 11:57:55,560 | INFO     | -- intersect: -2424476438.3888726
[2025-10-11 07:59:04] 2025-10-11 11:57:55,560 | INFO     | intersect: -2424476438.3888726
[2025-10-11 07:59:04] 2025-10-11 11:57:55,561 | INFO     | chi2: 1.5601780444924478
[2025-10-11 07:59:04] 2025-10-11 11:57:55,561 | INFO     | current chi2=1.5601780444924478 (change=-0.005670254888784741 %)
[2025-10-11 07:59:04] 2025-10-11 11:57:55,561 | INFO     | right removable region: 714
[2025-10-11 07:59:04] 2025-10-11 11:57:55,563 | INFO     | sum of square deviations: 115734953179.57776
[2025-10-11 07:59:04] 2025-10-11 11:57:55,579 | INFO     | sum of deviations: -101856768800.33331
[2025-10-11 07:59:04] 2025-10-11 11:57:55,579 | INFO     | mean x: 1760161889.7944446
[2025-10-11 07:59:04] 2025-10-11 11:57:55,579 | INFO     | mean y: 2602108.9166666665
[2025-10-11 07:59:04] 2025-10-11 11:57:55,580 | INFO     | -- intersect: 1551696809.6486707
[2025-10-11 07:59:04] 2025-10-11 11:57:55,580 | INFO     | intersect: 1551696809.6486707
[2025-10-11 07:59:04] 2025-10-11 11:57:55,581 | INFO     | chi2: 2.2701524617435056
[2025-10-11 07:59:04] 2025-10-11 11:57:55,581 | INFO     | current chi2=2.2701524617435056 (change=38.289496670117565 %)
[2025-10-11 07:59:04] 2025-10-11 11:57:55,582 | INFO     | sum of square deviations: 113340431484.7333
[2025-10-11 07:59:04] 2025-10-11 11:57:55,598 | INFO     | sum of deviations: -120847318265.35664
[2025-10-11 07:59:04] 2025-10-11 11:57:55,599 | INFO     | mean x: 1760162042.295105
[2025-10-11 07:59:04] 2025-10-11 11:57:55,599 | INFO     | mean y: 2603315.755244755
[2025-10-11 07:59:04] 2025-10-11 11:57:55,599 | INFO     | -- intersect: 1879346325.618308
[2025-10-11 07:59:04] 2025-10-11 11:57:55,599 | INFO     | intersect: 1879346325.618308
[2025-10-11 07:59:04] 2025-10-11 11:57:55,600 | INFO     | chi2: 2.2337277413783467
[2025-10-11 07:59:04] 2025-10-11 11:57:55,601 | INFO     | current chi2=2.2337277413783467 (change=1.6045054673193282 %)
[2025-10-11 07:59:04] 2025-10-11 11:57:55,601 | INFO     | left removable region: 20
[2025-10-11 07:59:04] 2025-10-11 11:57:55,602 | INFO     | sum of square deviations: 103644035541.95544
[2025-10-11 07:59:04] 2025-10-11 11:57:55,617 | INFO     | sum of deviations: 47484526444.63114
[2025-10-11 07:59:04] 2025-10-11 11:57:55,617 | INFO     | mean x: 1760162011.8025937
[2025-10-11 07:59:04] 2025-10-11 11:57:55,618 | INFO     | mean y: 2610278.9827089338
[2025-10-11 07:59:04] 2025-10-11 11:57:55,618 | INFO     | -- intersect: -803808143.0637944
[2025-10-11 07:59:04] 2025-10-11 11:57:55,618 | INFO     | intersect: -803808143.0637944
[2025-10-11 07:59:04] 2025-10-11 11:57:55,619 | INFO     | chi2: 0.06868090905241933
[2025-10-11 07:59:04] 2025-10-11 11:57:55,619 | INFO     | -- intersect: -803808143.0637944
[2025-10-11 07:59:04] 2025-10-11 11:57:55,620 | INFO     | current memory leak: 0.46 B/s (using 694 data points, chi2=0.07)
[2025-10-11 07:59:04] 2025-10-11 11:57:55,621 | INFO     | could have reported an average CPU frequency of 2899 MHz (27 samples)
[2025-10-11 07:59:04] 2025-10-11 11:57:55,621 | INFO     | ..............................
[2025-10-11 07:59:04] 2025-10-11 11:57:55,621 | INFO     | . Timing measurements:
[2025-10-11 07:59:04] 2025-10-11 11:57:55,621 | INFO     | . get job = 0 s
[2025-10-11 07:59:04] 2025-10-11 11:57:55,622 | INFO     | . initial setup = 1 s
[2025-10-11 07:59:04] 2025-10-11 11:57:55,622 | INFO     | . payload setup = 6 s
[2025-10-11 07:59:04] 2025-10-11 11:57:55,622 | INFO     | . stage-in = 0 s
[2025-10-11 07:59:04] 2025-10-11 11:57:55,622 | INFO     | . payload execution = 44184 s
[2025-10-11 07:59:04] 2025-10-11 11:57:55,622 | INFO     | . stage-out = 4 s
[2025-10-11 07:59:04] 2025-10-11 11:57:55,622 | INFO     | . log creation = 0 s
[2025-10-11 07:59:04] 2025-10-11 11:57:55,623 | INFO     | ..............................
[2025-10-11 07:59:04] 2025-10-11 11:57:55,935 | INFO     | time since job start (44249s) is within the limit (172800.0s)
[2025-10-11 07:59:04] 2025-10-11 11:57:56,046 | INFO     | 
[2025-10-11 07:59:04] 2025-10-11 11:57:56,057 | INFO     | job summary report
[2025-10-11 07:59:04] 2025-10-11 11:57:56,057 | INFO     | --------------------------------------------------
[2025-10-11 07:59:04] 2025-10-11 11:57:56,057 | INFO     | PanDA job id: 6837629102
[2025-10-11 07:59:04] 2025-10-11 11:57:56,057 | INFO     | task id: 46676269
[2025-10-11 07:59:04] 2025-10-11 11:57:56,057 | INFO     | errors: (none)
[2025-10-11 07:59:04] 2025-10-11 11:57:56,058 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 07:59:04] 2025-10-11 11:57:56,058 | INFO     | pilot state: finished 
[2025-10-11 07:59:04] 2025-10-11 11:57:56,058 | INFO     | transexitcode: 0
[2025-10-11 07:59:04] 2025-10-11 11:57:56,058 | INFO     | exeerrorcode: 0
[2025-10-11 07:59:04] 2025-10-11 11:57:56,058 | INFO     | exeerrordiag: 
[2025-10-11 07:59:04] 2025-10-11 11:57:56,058 | INFO     | exitcode: 0
[2025-10-11 07:59:04] 2025-10-11 11:57:56,059 | INFO     | exitmsg: OK
[2025-10-11 07:59:04] 2025-10-11 11:57:56,059 | INFO     | cpuconsumptiontime: 79417 s
[2025-10-11 07:59:04] 2025-10-11 11:57:56,059 | INFO     | nevents: 400
[2025-10-11 07:59:04] 2025-10-11 11:57:56,059 | INFO     | neventsw: 0
[2025-10-11 07:59:04] 2025-10-11 11:57:56,059 | INFO     | pid: 1304029
[2025-10-11 07:59:04] 2025-10-11 11:57:56,059 | INFO     | pgrp: 1304029
[2025-10-11 07:59:04] 2025-10-11 11:57:56,059 | INFO     | corecount: 10
[2025-10-11 07:59:04] 2025-10-11 11:57:56,060 | INFO     | event service: False
[2025-10-11 07:59:04] 2025-10-11 11:57:56,060 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 12: 2349175, 44196: 2392478, 44197: 2392477, 44202: 2401687, 44205: 2401743, 44233: 2401937}
[2025-10-11 07:59:04] 2025-10-11 11:57:56,060 | INFO     | --------------------------------------------------
[2025-10-11 07:59:04] 2025-10-11 11:57:56,060 | INFO     | 
[2025-10-11 07:59:04] 2025-10-11 11:57:56,060 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 07:59:04] 2025-10-11 11:57:56,484 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 07:59:04] 2025-10-11 11:57:56,484 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 07:59:04] 2025-10-11 11:57:56,485 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 07:59:04] 2025-10-11 11:57:56,485 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 07:59:04] 2025-10-11 11:57:56,485 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 07:59:04] 2025-10-11 11:57:56,485 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 07:59:04] 2025-10-11 11:57:56,485 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 07:59:04] 2025-10-11 11:57:56,485 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 07:59:04] 2025-10-11 11:57:56,485 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 07:59:04] 2025-10-11 11:57:56,486 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 07:59:04] 2025-10-11 11:57:56,486 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 07:59:04] 2025-10-11 11:57:56,486 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 07:59:04] 2025-10-11 11:57:56,486 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 07:59:04] 2025-10-11 11:57:56,486 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 07:59:04] 2025-10-11 11:57:56,486 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 07:59:04] 2025-10-11 11:57:56,487 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 07:59:04] 2025-10-11 11:57:56,487 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 07:59:04] 2025-10-11 11:57:56,487 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 07:59:04] 2025-10-11 11:57:56,487 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 07:59:04] 2025-10-11 11:57:56,487 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 07:59:04] 2025-10-11 11:57:56,529 | INFO     | job 6837629102 has completed (purged errors)
[2025-10-11 07:59:04] 2025-10-11 11:57:56,529 | INFO     | overall cleanup function is called
[2025-10-11 07:59:04] 2025-10-11 11:57:57,559 | INFO     | --- collectZombieJob: --- 10, [1304029]
[2025-10-11 07:59:04] 2025-10-11 11:57:57,559 | INFO     | zombie collector waiting for pid 1304029
[2025-10-11 07:59:04] 2025-10-11 11:57:57,559 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 07:59:04] 2025-10-11 11:57:57,559 | INFO     | collected zombie processes
[2025-10-11 07:59:04] 2025-10-11 11:57:57,559 | INFO     | will attempt to kill all subprocesses of pid=1304029
[2025-10-11 07:59:04] 2025-10-11 11:58:00,379 | INFO     | process IDs to be killed: [1304029] (in reverse order)
[2025-10-11 07:59:04] 2025-10-11 11:58:01,375 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 07:59:04] 2025-10-11 11:58:01,376 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 07:59:04] 2025-10-11 11:58:01,484 | INFO     | did not find any defunct processes belonging to 1304029
[2025-10-11 07:59:04] 2025-10-11 11:58:01,639 | INFO     | did not find any defunct processes belonging to 1304029
[2025-10-11 07:59:04] 2025-10-11 11:58:01,639 | INFO     | ready for new job
[2025-10-11 07:59:04] 2025-10-11 11:58:01,640 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 07:59:04] 2025-10-11 11:58:01,653 | INFO     | ***************************************
[2025-10-11 07:59:04] 2025-10-11 11:58:01,654 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 07:59:04] 2025-10-11 11:58:01,654 | INFO     | ***************************************
[2025-10-11 07:59:04] 2025-10-11 11:58:01,654 | INFO     | 
[2025-10-11 07:59:04] 2025-10-11 11:58:01,676 | INFO     | architecture information:
[2025-10-11 07:59:04] 2025-10-11 11:58:01,684 | INFO     | executing command: cat /etc/os-release
[2025-10-11 07:59:04] 2025-10-11 11:58:01,809 | INFO     | cat /etc/os-release:
[2025-10-11 07:59:04] NAME="CentOS Linux"
[2025-10-11 07:59:04] VERSION="7 (Core)"
[2025-10-11 07:59:04] ID="centos"
[2025-10-11 07:59:04] ID_LIKE="rhel fedora"
[2025-10-11 07:59:04] VERSION_ID="7"
[2025-10-11 07:59:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 07:59:04] ANSI_COLOR="0;31"
[2025-10-11 07:59:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 07:59:04] HOME_URL="https://www.centos.org/"
[2025-10-11 07:59:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 07:59:04] 
[2025-10-11 07:59:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 07:59:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 07:59:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 07:59:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 07:59:04] 
[2025-10-11 07:59:04] 2025-10-11 11:58:01,810 | INFO     | ***************************************
[2025-10-11 07:59:04] 2025-10-11 11:58:02,321 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 07:59:04] 2025-10-11 11:58:02,488 | INFO     | sufficient remaining disk space (53095694336 B)
[2025-10-11 07:59:04] 2025-10-11 11:58:02,489 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 07:59:04] 2025-10-11 11:58:02,489 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 07:59:04] 2025-10-11 11:58:02,489 | INFO     | update_server=False
[2025-10-11 07:59:04] 2025-10-11 11:58:02,489 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 07:59:04] 2025-10-11 11:58:02,499 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 07:59:04] 2025-10-11 11:58:02,586 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 07:59:04] 2025-10-11 11:58:02,586 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 07:59:04] 2025-10-11 11:58:02,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:59:04] 2025-10-11 11:58:02,586 | INFO     | will abort loop
[2025-10-11 07:59:04] 2025-10-11 11:58:02,793 | INFO     | all data control threads have been joined
[2025-10-11 07:59:04] 2025-10-11 11:58:03,495 | INFO     | [job] retrieve thread has finished
[2025-10-11 07:59:04] 2025-10-11 11:58:03,593 | INFO     | [job] job monitor thread has finished
[2025-10-11 07:59:04] 2025-10-11 11:58:03,602 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 07:59:04] 2025-10-11 11:58:03,609 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 07:59:04] 2025-10-11 11:58:03,616 | INFO     | [job] validate thread has finished
[2025-10-11 07:59:04] 2025-10-11 11:58:03,622 | INFO     | all payload control threads have been joined
[2025-10-11 07:59:04] 2025-10-11 11:58:03,799 | INFO     | [data] control thread has finished
[2025-10-11 07:59:04] 2025-10-11 11:58:03,834 | INFO     | [payload] validate_post thread has finished
[2025-10-11 07:59:04] 2025-10-11 11:58:03,930 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 07:59:04] 2025-10-11 11:58:03,968 | INFO     | all job control threads have been joined
[2025-10-11 07:59:04] 2025-10-11 11:58:04,226 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 07:59:04] 2025-10-11 11:58:04,378 | INFO     | [payload] failed_post thread has finished
[2025-10-11 07:59:04] 2025-10-11 11:58:04,614 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 07:59:04] 2025-10-11 11:58:04,619 | INFO     | [data] copytool_in thread has finished
[2025-10-11 07:59:04] 2025-10-11 11:58:04,644 | INFO     | [payload] control thread has finished
[2025-10-11 07:59:04] 2025-10-11 11:58:04,974 | INFO     | [job] control thread has finished
[2025-10-11 07:59:04] 2025-10-11 11:58:05,117 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:59:04] 2025-10-11 11:58:05,937 | INFO     | [data] copytool_out thread has finished
[2025-10-11 07:59:04] 2025-10-11 11:58:06,123 | INFO     | [job] queue monitor thread has finished
[2025-10-11 07:59:04] 2025-10-11 11:58:06,541 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 07:59:04] 2025-10-11 11:58:32,696 | INFO     | PID=1285481 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 07:59:04] 2025-10-11 11:58:32,749 | INFO     | .. there are 23 such processes running
[2025-10-11 07:59:04] 2025-10-11 11:58:32,774 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 07:59:04] 2025-10-11 11:58:32,774 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 07:59:04] 2025-10-11 11:58:32,774 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 07:59:04] 2025-10-11 11:58:54,758 | INFO     | [monitor] cgroup control has ended
[2025-10-11 07:59:04] 2025-10-11 11:58:55,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140253892839232)>', '<ExcThread(monitor, started 140253381760768)>']
[2025-10-11 07:59:04] 2025-10-11 11:58:56,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 07:59:04] 2025-10-11 11:58:56,127 | INFO     | [monitor] control thread has ended
[2025-10-11 07:59:04] 2025-10-11 11:59:00,362 | INFO     | all workflow threads have been joined
[2025-10-11 07:59:04] 2025-10-11 11:59:00,362 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 07:59:04] 2025-10-11 11:59:00,362 | INFO     | traces error code: 0
[2025-10-11 07:59:04] 2025-10-11 11:59:00,363 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 07:59:04] 2025-10-11 11:59:02,156 [wrapper] ==== pilot stdout END ====
[2025-10-11 07:59:04] 2025-10-11 11:59:02,225 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 07:59:04] 2025-10-11 11:59:02,298 [wrapper] pilotpid: 1285481
[2025-10-11 07:59:04] 2025-10-11 11:59:02,365 [wrapper] Pilot exit status: 0
[2025-10-11 07:59:04] 2025-10-11 11:59:02,671 [wrapper] pandaids: 6837629102 6837629102
[2025-10-11 07:59:04] 2025-10-11 11:59:03,156 [wrapper] cleanup supervisor_pilot  381948 1285482
[2025-10-11 07:59:04] 2025-10-11 11:59:03,188 [wrapper] Test setup, not cleaning
[2025-10-11 07:59:04] 2025-10-11 11:59:03,238 [wrapper] apfmon messages muted
[2025-10-11 07:59:04] 2025-10-11 11:59:03,305 [wrapper] ==== wrapper stdout END ====
[2025-10-11 07:59:04] 2025-10-11 11:59:03,381 [wrapper] ==== wrapper stderr END ====
[2025-10-11 07:59:04]  *** Error codes and diagnostics ***
[2025-10-11 07:59:04]     "exeErrorCode": 0,
[2025-10-11 07:59:04]     "exeErrorDiag": "",
[2025-10-11 07:59:04]     "pilotErrorCode": 0,
[2025-10-11 07:59:04]     "pilotErrorDiag": "",
[2025-10-11 07:59:04]  *** Listing of results directory ***
[2025-10-11 07:59:04] total 633868
[2025-10-11 07:59:04] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-11 07:59:04] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 08:01 pilot3.tar.gz
[2025-10-11 07:59:04] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 08:10 queuedata.json
[2025-10-11 07:59:04] -rwx------. 1 boincer umatlas     36292 Oct 10 08:11 runpilot2-wrapper.sh
[2025-10-11 07:59:04] -rw-r--r--. 1 boincer umatlas       100 Oct 10 17:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 07:59:04] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 17:09 run_atlas
[2025-10-11 07:59:04] -rw-r--r--. 1 boincer umatlas       105 Oct 10 17:09 job.xml
[2025-10-11 07:59:04] -rw-r--r--. 3 boincer umatlas 223088171 Oct 10 17:09 EVNT.46676267._001555.pool.root.1
[2025-10-11 07:59:04] -rw-r--r--. 3 boincer umatlas 223088171 Oct 10 17:09 ATLAS.root_0
[2025-10-11 07:59:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 17:09 start_atlas.sh
[2025-10-11 07:59:04] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 17:09 shared
[2025-10-11 07:59:04] -rw-r--r--. 2 boincer umatlas    569683 Oct 10 17:09 input.tar.gz
[2025-10-11 07:59:04] -rw-r--r--. 1 boincer umatlas         0 Oct 10 17:09 boinc_lockfile
[2025-10-11 07:59:04] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 19:40 pandaJob.out
[2025-10-11 07:59:04] -rw-------. 1 boincer umatlas    975525 Oct 10 19:40 agis_schedconf.cvmfs.json
[2025-10-11 07:59:04] -rw-------. 1 boincer umatlas 187468825 Oct 11 07:53 HITS.46676269._038314.pool.root.1
[2025-10-11 07:59:04] -rw-r--r--. 1 boincer umatlas       532 Oct 11 07:54 boinc_task_state.xml
[2025-10-11 07:59:04] -rw-r--r--. 1 boincer umatlas      6525 Oct 11 07:55 init_data.xml
[2025-10-11 07:59:04] -rw-------. 1 boincer umatlas      1047 Oct 11 07:57 memory_monitor_summary.json
[2025-10-11 07:59:04] -rw-------. 1 boincer umatlas   1560580 Oct 11 07:57 agis_ddmendpoints.agis.ALL.json
[2025-10-11 07:59:04] -rw-------. 1 boincer umatlas    832316 Oct 11 07:57 log.46676269._038314.job.log.tgz.1
[2025-10-11 07:59:04] -rw-------. 1 boincer umatlas      7827 Oct 11 07:57 heartbeat.json
[2025-10-11 07:59:04] -rw-------. 1 boincer umatlas        95 Oct 11 07:58 pilot_heartbeat.json
[2025-10-11 07:59:04] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 07:58 boinc_mmap_file
[2025-10-11 07:59:04] -rw-r--r--. 1 boincer umatlas        29 Oct 11 07:58 wrapper_checkpoint.txt
[2025-10-11 07:59:04] -rw-------. 1 boincer umatlas      5010 Oct 11 07:59 pilotlog.txt
[2025-10-11 07:59:04] -rw-------. 1 boincer umatlas   4932615 Oct 11 07:59 log.46676269._038314.job.log.1
[2025-10-11 07:59:04] -rw-------. 1 boincer umatlas       357 Oct 11 07:59 output.list
[2025-10-11 07:59:04] -rw-r--r--. 1 boincer umatlas       620 Oct 11 07:59 runtime_log
[2025-10-11 07:59:04] -rw-------. 1 boincer umatlas   5785600 Oct 11 07:59 result.tar.gz
[2025-10-11 07:59:04] -rw-r--r--. 1 boincer umatlas      8791 Oct 11 07:59 runtime_log.err
[2025-10-11 07:59:04] -rw-------. 1 boincer umatlas       783 Oct 11 07:59 pJnNDm08QR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmiwPMDmLm94Eo.diag
[2025-10-11 07:59:04] -rw-r--r--. 1 boincer umatlas     23231 Oct 11 07:59 stderr.txt
[2025-10-11 07:59:04] HITS file was successfully produced:
[2025-10-11 07:59:04] -rw-------. 1 boincer umatlas 187468825 Oct 11 07:53 shared/HITS.pool.root.1
[2025-10-11 07:59:04]  *** Contents of shared directory: ***
[2025-10-11 07:59:04] total 407168
[2025-10-11 07:59:04] -rw-r--r--. 3 boincer umatlas 223088171 Oct 10 17:09 ATLAS.root_0
[2025-10-11 07:59:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 17:09 start_atlas.sh
[2025-10-11 07:59:04] -rw-r--r--. 2 boincer umatlas    569683 Oct 10 17:09 input.tar.gz
[2025-10-11 07:59:04] -rw-------. 1 boincer umatlas 187468825 Oct 11 07:53 HITS.pool.root.1
[2025-10-11 07:59:04] -rw-------. 1 boincer umatlas   5785600 Oct 11 07:59 result.tar.gz
07:59:06 (1276104): run_atlas exited; CPU time 81556.421731
07:59:06 (1276104): called boinc_finish(0)

</stderr_txt>
]]>

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