Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-11 00:31:34 (29208): vboxwrapper version 26210
2025-10-11 00:31:34 (29208): BOINC client version: 7.16.20
2025-10-11 00:31:35 (29208): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-10-11 00:31:35 (29208): Successfully copied 'init_data.xml' to the shared directory.
2025-10-11 00:31:36 (29208): Create VM. (boinc_32a2a1736c709fc6, slot#5)
2025-10-11 00:31:37 (29208): Setting Memory Size for VM. (4800MB)
2025-10-11 00:31:37 (29208): Setting CPU Count for VM. (8)
2025-10-11 00:31:37 (29208): Setting Chipset Options for VM.
2025-10-11 00:31:38 (29208): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-11 00:31:39 (29208): Setting Boot Options for VM.
2025-10-11 00:31:39 (29208): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-11 00:31:40 (29208): Enabling VM Network Access.
2025-10-11 00:31:40 (29208): Disabling USB Support for VM.
2025-10-11 00:31:40 (29208): Disabling COM Port Support for VM.
2025-10-11 00:31:40 (29208): Disabling LPT Port Support for VM.
2025-10-11 00:31:41 (29208): Disabling Audio Support for VM.
2025-10-11 00:31:41 (29208): Disabling Clipboard Support for VM.
2025-10-11 00:31:41 (29208): Disabling Drag and Drop Support for VM.
2025-10-11 00:31:42 (29208): Adding storage controller(s) to VM.
2025-10-11 00:31:42 (29208): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-11 00:31:43 (29208): Adding VirtualBox Guest Additions to VM.
2025-10-11 00:31:43 (29208): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-11 00:31:43 (29208): forwarding host port 57879 to guest port 80
2025-10-11 00:31:44 (29208): Enabling remote desktop for VM.
2025-10-11 00:31:44 (29208): Required extension pack not installed, remote desktop not enabled.
2025-10-11 00:31:44 (29208): Enabling shared directory for VM.
2025-10-11 00:31:44 (29208): Starting VM using VBoxManage interface. (boinc_32a2a1736c709fc6, slot#5)
2025-10-11 00:31:48 (29208): Successfully started VM. (PID = '30280')
2025-10-11 00:31:48 (29208): Reporting VM Process ID to BOINC.
2025-10-11 00:31:48 (29208): Guest Log: BIOS: VirtualBox 6.0.14
2025-10-11 00:31:48 (29208): Guest Log: CPUID EDX: 0x178bfbff
2025-10-11 00:31:48 (29208): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-11 00:31:48 (29208): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-11 00:31:48 (29208): Detected: Web Application Enabled (http://localhost:57879)
2025-10-11 00:31:48 (29208): Preference change detected
2025-10-11 00:31:48 (29208): Setting CPU throttle for VM. (100%)
2025-10-11 00:31:49 (29208): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-11 00:31:50 (29208): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-11 00:31:50 (29208): Guest Log: BIOS: Booting from Hard Disk...
2025-10-11 00:31:54 (29208): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-11 00:31:54 (29208): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-11 00:31:54 (29208): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-11 00:32:02 (29208): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-11 00:32:02 (29208): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-11 00:32:12 (29208): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-11 00:32:12 (29208): Guest Log: 00:00:00.000214 main     Log opened 2025-10-11T00:32:10.226379000Z
2025-10-11 00:32:12 (29208): Guest Log: 00:00:00.000324 main     OS Product: Linux
2025-10-11 00:32:12 (29208): Guest Log: 00:00:00.000371 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-11 00:32:12 (29208): Guest Log: 00:00:00.000413 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-11 00:32:12 (29208): Guest Log: 00:00:00.000454 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-11 00:32:12 (29208): Guest Log: 00:00:00.000456 main     Process ID: 1370
2025-10-11 00:32:12 (29208): Guest Log: 00:00:00.000457 main     Package type: LINUX_64BITS_GENERIC
2025-10-11 00:32:12 (29208): Guest Log: 00:00:00.001527 main     5.2.32 r132073 started. Verbose level = 0
2025-10-11 00:32:12 (29208): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-11 00:32:12 (29208): Guest Log: [INFO] Mounting shared directory
2025-10-11 00:32:12 (29208): Guest Log: [INFO] Checking for init_data.xml
2025-10-11 00:32:19 (29208): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-11 00:32:19 (29208): Guest Log: [INFO] Detected branch: prod
2025-10-11 00:32:19 (29208): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-11 00:32:19 (29208): Guest Log: Copying input files
2025-10-11 00:32:21 (29208): Guest Log: Copied input files into RunAtlas.
2025-10-11 00:32:21 (29208): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-11 00:32:21 (29208): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-11 00:32:21 (29208): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-11 00:32:21 (29208): Guest Log: Further information can be found at the LHC@home message board.
2025-10-11 00:32:22 (29208): Guest Log: 00:00:10.003805 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 844 053 000ns (GuestNow=1 760 135 542 385 431 000 ns GuestLast=1 760 142 730 229 484 000 ns fSetTimeLastLoop=true )
2025-10-11 00:32:30 (29208): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-11 00:32:30 (29208): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-11 00:32:30 (29208): Guest Log: 2.6.3.0 1653 0 30128 151564 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-11 00:32:32 (29208): Guest Log: copied the webapp to /var/www
2025-10-11 00:32:32 (29208): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-11 00:32:32 (29208): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-11 00:32:32 (29208): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-11 00:32:32 (29208): Guest Log:  *** Starting ATLAS job. (PandaID=6837598232 taskID=46676269) ***
2025-10-11 02:12:07 (29208): Status Report: Elapsed Time: '6000.000000'
2025-10-11 02:12:07 (29208): Status Report: CPU Time: '36614.296875'
2025-10-11 03:52:25 (29208): Status Report: Elapsed Time: '12000.000000'
2025-10-11 03:52:25 (29208): Status Report: CPU Time: '78288.000000'
2025-10-11 04:44:50 (29208): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 04:45:30 (29208): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 04:45:46 (29208): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 04:46:00 (29208): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 04:46:20 (29208): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 04:46:30 (29208): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 04:46:40 (29208): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 04:46:50 (29208): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 04:47:01 (29208): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 04:47:10 (29208): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 04:47:27 (29208): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 04:47:41 (29208): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 04:47:51 (29208): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 04:48:00 (29208): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 05:12:41 (29208): Guest Log:  *** Job finished ***
2025-10-11 05:12:41 (29208): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:46,106 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:46,106 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:53,619 | INFO     | [monitor] cgroup control has ended
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:54,623 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140379842471744)>', '<ExcThread(monitor, started 140379177342720)>']
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:55,198 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:55,198 | INFO     | [monitor] control thread has ended
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:59,629 | INFO     | all workflow threads have been joined
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:59,629 | INFO     | end of generic workflow (traces error code: 0)
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:59,629 | INFO     | traces error code: 0
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:59,630 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:59,752 [wrapper] ==== pilot stdout END ====
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:59,759 [wrapper] ==== wrapper stdout RESUME ====
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:59,765 [wrapper] pilotpid: 6085
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:59,771 [wrapper] Pilot exit status: 0
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:59,851 [wrapper] pandaids: 6837598232
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:59,905 [wrapper] cleanup supervisor_pilot 16195 6086
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:59,913 [wrapper] Test setup, not cleaning
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:59,921 [wrapper] apfmon messages muted
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:59,929 [wrapper] ==== wrapper stdout END ====
2025-10-11 05:12:41 (29208): Guest Log: 2025-10-11 03:10:59,937 [wrapper] ==== wrapper stderr END ====
2025-10-11 05:12:41 (29208): Guest Log:  *** Error codes and diagnostics ***
2025-10-11 05:12:41 (29208): Guest Log:     "exeErrorCode": 0,
2025-10-11 05:12:41 (29208): Guest Log:     "exeErrorDiag": "",
2025-10-11 05:12:41 (29208): Guest Log:     "pilotErrorCode": 0,
2025-10-11 05:12:41 (29208): Guest Log:     "pilotErrorDiag": "",
2025-10-11 05:12:41 (29208): Guest Log:  *** Listing of results directory ***
2025-10-11 05:12:41 (29208): Guest Log: total 203404
2025-10-11 05:12:41 (29208): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 10 11:32 pilot3.tar.gz
2025-10-11 05:12:41 (29208): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 10 11:40 queuedata.json
2025-10-11 05:12:41 (29208): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 10 11:40 runpilot2-wrapper.sh
2025-10-11 05:12:41 (29208): Guest Log: -rwxr-xr-x. 1 atlas atlas      8774 Oct 10 22:32 init_data.xml
2025-10-11 05:12:41 (29208): Guest Log: -rwxr-xr-x. 1 atlas atlas    569676 Oct 10 22:32 input.tar.gz
2025-10-11 05:12:41 (29208): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 10 22:32 start_atlas.sh
2025-10-11 05:12:41 (29208): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 10 22:32 EVNT.46676267._001536.pool.root.1 -> /data/./ATLAS.root_0
2025-10-11 05:12:41 (29208): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 10 22:32 pandaJob.out
2025-10-11 05:12:41 (29208): Guest Log: -rw-------. 1 atlas atlas    975517 Oct 10 22:33 agis_schedconf.cvmfs.json
2025-10-11 05:12:41 (29208): Guest Log: drwx------. 5 atlas atlas      4096 Oct 10 22:33 pilot3
2025-10-11 05:12:41 (29208): Guest Log: -rw-------. 1 atlas atlas 199246894 Oct 11 03:08 HITS.46676269._037818.pool.root.1
2025-10-11 05:12:41 (29208): Guest Log: -rw-------. 1 atlas atlas      1035 Oct 11 03:09 memory_monitor_summary.json
2025-10-11 05:12:41 (29208): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 11 03:09 agis_ddmendpoints.agis.ALL.json
2025-10-11 05:12:41 (29208): Guest Log: -rw-------. 1 atlas atlas    477224 Oct 11 03:10 log.46676269._037818.job.log.tgz.1
2025-10-11 05:12:41 (29208): Guest Log: -rw-------. 1 atlas atlas      7836 Oct 11 03:10 heartbeat.json
2025-10-11 05:12:41 (29208): Guest Log: -rw-------. 1 atlas atlas        95 Oct 11 03:10 pilot_heartbeat.json
2025-10-11 05:12:41 (29208): Guest Log: -rw-------. 1 atlas atlas      4805 Oct 11 03:10 pilotlog.txt
2025-10-11 05:12:41 (29208): Guest Log: -rw-------. 1 atlas atlas   2125730 Oct 11 03:10 log.46676269._037818.job.log.1
2025-10-11 05:12:41 (29208): Guest Log: -rw-------. 1 atlas atlas       357 Oct 11 03:11 output.list
2025-10-11 05:12:41 (29208): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 11 03:11 runtime_log
2025-10-11 05:12:41 (29208): Guest Log: -rw-------. 1 atlas atlas   2621440 Oct 11 03:11 result.tar.gz
2025-10-11 05:12:41 (29208): Guest Log: -rw-r--r--. 1 atlas atlas      8646 Oct 11 03:11 runtime_log.err
2025-10-11 05:12:41 (29208): Guest Log: -rw-------. 1 atlas atlas       662 Oct 11 03:11 ehXMDmhfQR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbDdNDmvL4T8m.diag
2025-10-11 05:12:41 (29208): Guest Log: Looking for outputfile HITS.46676269._037818.pool.root.1
2025-10-11 05:12:41 (29208): Guest Log: HITS file was successfully produced
2025-10-11 05:12:41 (29208): Guest Log: -rw-------. 1 atlas atlas 199246894 Oct 11 03:08 /home/atlas/RunAtlas/HITS.46676269._037818.pool.root.1
2025-10-11 05:12:43 (29208): Guest Log: Successfully finished the ATLAS job!
2025-10-11 05:12:43 (29208): Guest Log: Copying the results back to the shared directory!
2025-10-11 05:12:43 (29208): Guest Log:  *** Contents of shared directory: ***
2025-10-11 05:12:43 (29208): Guest Log: total 412440
2025-10-11 05:12:43 (29208): Guest Log: -rwxrwxrwx. 1 root root 219861596 Oct 10 22:31 ATLAS.root_0
2025-10-11 05:12:43 (29208): Guest Log: -rwxrwxrwx. 1 root root 199246894 Oct 11  2025 HITS.pool.root.1
2025-10-11 05:12:43 (29208): Guest Log: -rwxrwxrwx. 1 root root      8774 Oct 10 22:31 init_data.xml
2025-10-11 05:12:43 (29208): Guest Log: -rwxrwxrwx. 1 root root    569676 Oct 10 17:23 input.tar.gz
2025-10-11 05:12:43 (29208): Guest Log: -rwxrwxrwx. 1 root root   2621440 Oct 11  2025 result.tar.gz
2025-10-11 05:12:43 (29208): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 10 17:23 start_atlas.sh
2025-10-11 05:12:43 (29208): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-11 05:12:43 (29208): VM Completion File Detected.
2025-10-11 05:12:43 (29208): Powering off VM.
2025-10-11 05:12:44 (29208): Successfully stopped VM.
2025-10-11 05:12:44 (29208): Deregistering VM. (boinc_32a2a1736c709fc6, slot#5)
2025-10-11 05:12:44 (29208): Removing network bandwidth throttle group from VM.
2025-10-11 05:12:44 (29208): Removing VM from VirtualBox.
2025-10-11 05:12:49 (29208): called boinc_finish(0)

</stderr_txt>
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