Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:24:53 (150305): wrapper (7.7.26015): starting
13:24:53 (150305): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 13:24:53] Arguments: --nthreads 12
[2025-10-10 13:24:53] Threads: 12
[2025-10-10 13:24:53] Checking for CVMFS
[2025-10-10 13:24:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 13:24:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 13:24:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 13:24:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 13:24:53] 2.13.2.0 135553 1610 104188 151556 2 248 23787552 32503808 6417 16776704 0 28103863 99.976 2063577 53611 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 13:24:53] CVMFS is ok
[2025-10-10 13:24:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 13:24:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 13:24:53] Further information can be found at the LHC@home message board.
[2025-10-10 13:24:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 13:24:53] Checking for apptainer binary...
[2025-10-10 13:24:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 13:24:53] Running /usr/bin/apptainer --version
[2025-10-10 13:24:53] apptainer version 1.4.3-1.el9
[2025-10-10 13:24:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 13:24:53] c8-7-2.aglt2.org
[2025-10-10 13:24:53] apptainer works
[2025-10-10 13:24:53] Set ATHENA_PROC_NUMBER=12
[2025-10-10 13:24:53] Set ATHENA_CORE_NUMBER=12
[2025-10-10 13:24:53] Starting ATLAS job with PandaID=6837511233
[2025-10-10 13:24:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 13:54:10]  *** The last 200 lines of the pilot log: ***
[2025-10-10 13:54:10]  status_code=0
[2025-10-10 13:54:10]  storage_token=
[2025-10-10 13:54:10]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6837511233/log.46676269._035196.job.log.tgz.1
[2025-10-10 13:54:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/bc/log.46676269._035196.job.log.tgz.1
[2025-10-10 13:54:10]  workdir=None
[2025-10-10 13:54:10] ]
[2025-10-10 13:54:10] 2025-10-10 17:53:00,081 | INFO     | transferring file log.46676269._035196.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6837511233/log.46676269._035196.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-10 13:54:10] 2025-10-10 17:53:00,081 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6837511233/log.46676269._035196.job.log.tgz.1 /tmp/boinchome/slots/2/log.46676269._035196.job
[2025-10-10 13:54:10] 2025-10-10 17:53:00,098 | INFO     | adding to output.list: log.46676269._035196.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/bc/log.46676269._035196.job.log.tg
[2025-10-10 13:54:10] 2025-10-10 17:53:00,099 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 13:54:10] 2025-10-10 17:53:00,099 | INFO     | summary of transferred files:
[2025-10-10 13:54:10] 2025-10-10 17:53:00,099 | INFO     |  -- lfn=log.46676269._035196.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 13:54:10] 2025-10-10 17:53:00,099 | INFO     | stage-out finished correctly
[2025-10-10 13:54:10] 2025-10-10 17:53:00,132 | INFO     | time since job start (1679s) is within the limit (172800.0s)
[2025-10-10 13:54:10] 2025-10-10 17:53:02,148 | INFO     | time since job start (1681s) is within the limit (172800.0s)
[2025-10-10 13:54:10] 2025-10-10 17:53:03,156 | WARNING  | process 161509 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 13:54:10] 2025-10-10 17:53:03,156 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837511233/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 13:54:10] 2025-10-10 17:53:03,439 | INFO     | number of running child processes to parent process 161509: 1
[2025-10-10 13:54:10] 2025-10-10 17:53:03,439 | INFO     | maximum number of monitored processes: 6
[2025-10-10 13:54:10] 2025-10-10 17:53:03,460 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 13:54:10] 2025-10-10 17:53:04,154 | INFO     | time since job start (1683s) is within the limit (172800.0s)
[2025-10-10 13:54:10] 2025-10-10 17:53:05,942 | INFO     | monitor loop #127: job 0:6837511233 is in state 'finished'
[2025-10-10 13:54:10] 2025-10-10 17:53:05,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 13:54:10] 2025-10-10 17:53:06,159 | INFO     | time since job start (1685s) is within the limit (172800.0s)
[2025-10-10 13:54:10] 2025-10-10 17:53:06,491 | INFO     | job 6837511233 has state=finished
[2025-10-10 13:54:10] 2025-10-10 17:53:06,491 | INFO     | preparing for final server update for job 6837511233 in state='finished'
[2025-10-10 13:54:10] 2025-10-10 17:53:06,491 | INFO     | this job has now completed (state=finished)
[2025-10-10 13:54:10] 2025-10-10 17:53:06,491 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 13:54:10] 2025-10-10 17:53:06,491 | INFO     | log transfer has been attempted: DONE
[2025-10-10 13:54:10] 2025-10-10 17:53:06,491 | INFO     | job 6837511233 has finished - writing final server update
[2025-10-10 13:54:10] 2025-10-10 17:53:06,492 | INFO     | total number of processed events: 400 (read)
[2025-10-10 13:54:10] 2025-10-10 17:53:06,493 | INFO     | executing command: lscpu
[2025-10-10 13:54:10] 2025-10-10 17:53:06,558 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 13:54:10] 2025-10-10 17:53:08,161 | INFO     | time since job start (1687s) is within the limit (172800.0s)
[2025-10-10 13:54:10] 2025-10-10 17:53:08,445 | INFO     | monitor loop #128: job 0:6837511233 is in state 'finished'
[2025-10-10 13:54:10] 2025-10-10 17:53:08,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 13:54:10] 2025-10-10 17:53:09,338 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 13:54:10] 2025-10-10 17:53:09,355 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3525.1402187499975
[2025-10-10 13:54:10] 2025-10-10 17:53:09,380 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837511233/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 13:54:10] 2025-10-10 17:53:09,380 | INFO     | extracted standard info from prmon json
[2025-10-10 13:54:10] 2025-10-10 17:53:09,380 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 13:54:10] 2025-10-10 17:53:09,381 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 13:54:10] 2025-10-10 17:53:09,381 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 13:54:10] 2025-10-10 17:53:09,381 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 13:54:10] 2025-10-10 17:53:09,382 | INFO     | fitting pss+swap vs Time
[2025-10-10 13:54:10] 2025-10-10 17:53:09,382 | INFO     | sum of square deviations: 2865170.0
[2025-10-10 13:54:10] 2025-10-10 17:53:09,382 | INFO     | sum of deviations: -149939525.00000003
[2025-10-10 13:54:10] 2025-10-10 17:53:09,382 | INFO     | mean x: 1760118038.0
[2025-10-10 13:54:10] 2025-10-10 17:53:09,382 | INFO     | mean y: 2449137.1904761903
[2025-10-10 13:54:10] 2025-10-10 17:53:09,382 | INFO     | -- intersect: 92112607543.72551
[2025-10-10 13:54:10] 2025-10-10 17:53:09,382 | INFO     | intersect: 92112607543.72551
[2025-10-10 13:54:10] 2025-10-10 17:53:09,382 | INFO     | chi2: 0.0006432051992645428
[2025-10-10 13:54:10] 2025-10-10 17:53:09,382 | INFO     | -- intersect: 92112607543.72551
[2025-10-10 13:54:10] 2025-10-10 17:53:09,382 | INFO     | current memory leak: -52.33 B/s (using 21 data points, chi2=0.00)
[2025-10-10 13:54:10] 2025-10-10 17:53:09,383 | INFO     | could have reported an average CPU frequency of 3526 MHz (4 samples)
[2025-10-10 13:54:10] 2025-10-10 17:53:09,383 | INFO     | ..............................
[2025-10-10 13:54:10] 2025-10-10 17:53:09,383 | INFO     | . Timing measurements:
[2025-10-10 13:54:10] 2025-10-10 17:53:09,383 | INFO     | . get job = 0 s
[2025-10-10 13:54:10] 2025-10-10 17:53:09,383 | INFO     | . initial setup = 2 s
[2025-10-10 13:54:10] 2025-10-10 17:53:09,383 | INFO     | . payload setup = 3 s
[2025-10-10 13:54:10] 2025-10-10 17:53:09,383 | INFO     | . stage-in = 0 s
[2025-10-10 13:54:10] 2025-10-10 17:53:09,383 | INFO     | . payload execution = 1655 s
[2025-10-10 13:54:10] 2025-10-10 17:53:09,383 | INFO     | . stage-out = 0 s
[2025-10-10 13:54:10] 2025-10-10 17:53:09,383 | INFO     | . log creation = 0 s
[2025-10-10 13:54:10] 2025-10-10 17:53:09,383 | INFO     | ..............................
[2025-10-10 13:54:10] 2025-10-10 17:53:09,436 | INFO     | 
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | job summary report
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | --------------------------------------------------
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | PanDA job id: 6837511233
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | task id: 46676269
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | errors: (none)
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | pilot state: finished 
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | transexitcode: 0
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | exeerrorcode: 0
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | exeerrordiag: 
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | exitcode: 0
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | exitmsg: OK
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | cpuconsumptiontime: 17740 s
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | nevents: 400
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | neventsw: 0
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | pid: 161509
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | pgrp: 161509
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | corecount: 12
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | event service: False
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 1663: 2374014, 1664: 2383012, 1668: 2383068, 1673: 2383390}
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | --------------------------------------------------
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | 
[2025-10-10 13:54:10] 2025-10-10 17:53:09,437 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-10 13:54:10] 2025-10-10 17:53:09,452 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 13:54:10] 2025-10-10 17:53:09,452 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 13:54:10] 2025-10-10 17:53:09,452 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 13:54:10] 2025-10-10 17:53:09,452 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 13:54:10] 2025-10-10 17:53:09,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 13:54:10] 2025-10-10 17:53:09,452 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 13:54:10] 2025-10-10 17:53:09,453 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 13:54:10] 2025-10-10 17:53:09,453 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 13:54:10] 2025-10-10 17:53:09,453 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 13:54:10] 2025-10-10 17:53:09,453 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 13:54:10] 2025-10-10 17:53:09,453 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 13:54:10] 2025-10-10 17:53:09,453 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 13:54:10] 2025-10-10 17:53:09,453 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 13:54:10] 2025-10-10 17:53:09,453 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 13:54:10] 2025-10-10 17:53:09,453 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 13:54:10] 2025-10-10 17:53:09,453 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 13:54:10] 2025-10-10 17:53:09,453 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 13:54:10] 2025-10-10 17:53:09,453 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 13:54:10] 2025-10-10 17:53:09,453 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 13:54:10] 2025-10-10 17:53:09,453 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 13:54:10] 2025-10-10 17:53:09,453 | INFO     | job 6837511233 has completed (purged errors)
[2025-10-10 13:54:10] 2025-10-10 17:53:09,453 | INFO     | overall cleanup function is called
[2025-10-10 13:54:10] 2025-10-10 17:53:10,460 | INFO     | --- collectZombieJob: --- 10, [161509]
[2025-10-10 13:54:10] 2025-10-10 17:53:10,461 | INFO     | zombie collector waiting for pid 161509
[2025-10-10 13:54:10] 2025-10-10 17:53:10,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 13:54:10] 2025-10-10 17:53:10,461 | INFO     | collected zombie processes
[2025-10-10 13:54:10] 2025-10-10 17:53:10,461 | INFO     | will attempt to kill all subprocesses of pid=161509
[2025-10-10 13:54:10] 2025-10-10 17:53:10,726 | INFO     | process IDs to be killed: [161509] (in reverse order)
[2025-10-10 13:54:10] 2025-10-10 17:53:10,823 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 13:54:10] 2025-10-10 17:53:10,824 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 13:54:10] 2025-10-10 17:53:10,843 | INFO     | did not find any defunct processes belonging to 161509
[2025-10-10 13:54:10] 2025-10-10 17:53:10,857 | INFO     | did not find any defunct processes belonging to 161509
[2025-10-10 13:54:10] 2025-10-10 17:53:10,857 | INFO     | ready for new job
[2025-10-10 13:54:10] 2025-10-10 17:53:10,857 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 13:54:10] 2025-10-10 17:53:10,858 | INFO     | ***************************************
[2025-10-10 13:54:10] 2025-10-10 17:53:10,858 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 13:54:10] 2025-10-10 17:53:10,858 | INFO     | ***************************************
[2025-10-10 13:54:10] 2025-10-10 17:53:10,858 | INFO     | 
[2025-10-10 13:54:10] 2025-10-10 17:53:10,875 | INFO     | architecture information:
[2025-10-10 13:54:10] 2025-10-10 17:53:10,875 | INFO     | executing command: cat /etc/os-release
[2025-10-10 13:54:10] 2025-10-10 17:53:10,887 | INFO     | cat /etc/os-release:
[2025-10-10 13:54:10] NAME="CentOS Linux"
[2025-10-10 13:54:10] VERSION="7 (Core)"
[2025-10-10 13:54:10] ID="centos"
[2025-10-10 13:54:10] ID_LIKE="rhel fedora"
[2025-10-10 13:54:10] VERSION_ID="7"
[2025-10-10 13:54:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 13:54:10] ANSI_COLOR="0;31"
[2025-10-10 13:54:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 13:54:10] HOME_URL="https://www.centos.org/"
[2025-10-10 13:54:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 13:54:10] 
[2025-10-10 13:54:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 13:54:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 13:54:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 13:54:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 13:54:10] 
[2025-10-10 13:54:10] 2025-10-10 17:53:10,887 | INFO     | ***************************************
[2025-10-10 13:54:10] 2025-10-10 17:53:11,390 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-10 13:54:10] 2025-10-10 17:53:11,403 | INFO     | sufficient remaining disk space (90881130496 B)
[2025-10-10 13:54:10] 2025-10-10 17:53:11,403 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 13:54:10] 2025-10-10 17:53:11,403 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 13:54:10] 2025-10-10 17:53:11,403 | INFO     | update_server=False
[2025-10-10 13:54:10] 2025-10-10 17:53:11,403 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 13:54:10] 2025-10-10 17:53:11,404 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 13:54:10] 2025-10-10 17:53:11,404 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 13:54:10] 2025-10-10 17:53:11,953 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 13:54:10] 2025-10-10 17:53:11,953 | INFO     | aborting loop
[2025-10-10 13:54:10] 2025-10-10 17:53:12,318 | INFO     | all data control threads have been joined
[2025-10-10 13:54:10] 2025-10-10 17:53:12,409 | INFO     | [job] retrieve thread has finished
[2025-10-10 13:54:10] 2025-10-10 17:53:12,409 | INFO     | [job] queue monitor thread has finished
[2025-10-10 13:54:10] 2025-10-10 17:53:12,436 | INFO     | all payload control threads have been joined
[2025-10-10 13:54:10] 2025-10-10 17:53:12,606 | INFO     | [payload] validate_post thread has finished
[2025-10-10 13:54:10] 2025-10-10 17:53:12,958 | INFO     | [job] job monitor thread has finished
[2025-10-10 13:54:10] 2025-10-10 17:53:13,026 | INFO     | all job control threads have been joined
[2025-10-10 13:54:10] 2025-10-10 17:53:13,249 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 13:54:10] 2025-10-10 17:53:13,323 | INFO     | [data] control thread has finished
[2025-10-10 13:54:10] 2025-10-10 17:53:13,409 | INFO     | [job] validate thread has finished
[2025-10-10 13:54:10] 2025-10-10 17:53:13,410 | INFO     | [data] copytool_out thread has finished
[2025-10-10 13:54:10] 2025-10-10 17:53:13,441 | INFO     | [payload] control thread has finished
[2025-10-10 13:54:10] 2025-10-10 17:53:13,542 | INFO     | [payload] failed_post thread has finished
[2025-10-10 13:54:10] 2025-10-10 17:53:13,552 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 13:54:10] 2025-10-10 17:53:13,554 | INFO     | [data] copytool_in thread has finished
[2025-10-10 13:54:10] 2025-10-10 17:53:13,644 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 13:54:10] 2025-10-10 17:53:13,690 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 13:54:10] 2025-10-10 17:53:14,023 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 13:54:10] 2025-10-10 17:53:14,031 | INFO     | [job] control thread has finished
[2025-10-10 13:54:10] 2025-10-10 17:53:18,029 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 13:54:10] 2025-10-10 17:53:41,713 | INFO     | PID=154286 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 13:54:10] 2025-10-10 17:53:41,713 | INFO     | .. there are 10 such processes running
[2025-10-10 13:54:10] 2025-10-10 17:53:41,714 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 13:54:10] 2025-10-10 17:53:41,714 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 13:54:10] 2025-10-10 17:53:41,714 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 13:54:10] 2025-10-10 17:54:03,773 | INFO     | [monitor] cgroup control has ended
[2025-10-10 13:54:10] 2025-10-10 17:54:05,351 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140622644520768)>', '<ExcThread(monitor, started 140622287578880)>']
[2025-10-10 13:54:10] 2025-10-10 17:54:05,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 13:54:10] 2025-10-10 17:54:05,831 | INFO     | [monitor] control thread has ended
[2025-10-10 13:54:10] 2025-10-10 17:54:10,365 | INFO     | all workflow threads have been joined
[2025-10-10 13:54:10] 2025-10-10 17:54:10,365 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 13:54:10] 2025-10-10 17:54:10,366 | INFO     | traces error code: 0
[2025-10-10 13:54:10] 2025-10-10 17:54:10,366 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 13:54:10] 2025-10-10 17:54:10,483 [wrapper] ==== pilot stdout END ====
[2025-10-10 13:54:10] 2025-10-10 17:54:10,485 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 13:54:10] 2025-10-10 17:54:10,487 [wrapper] pilotpid: 154286
[2025-10-10 13:54:10] 2025-10-10 17:54:10,489 [wrapper] Pilot exit status: 0
[2025-10-10 13:54:10] 2025-10-10 17:54:10,497 [wrapper] pandaids: 6837511233
[2025-10-10 13:54:10] 2025-10-10 17:54:10,595 [wrapper] cleanup supervisor_pilot  268100 154287
[2025-10-10 13:54:10] 2025-10-10 17:54:10,597 [wrapper] Test setup, not cleaning
[2025-10-10 13:54:10] 2025-10-10 17:54:10,599 [wrapper] apfmon messages muted
[2025-10-10 13:54:10] 2025-10-10 17:54:10,602 [wrapper] ==== wrapper stdout END ====
[2025-10-10 13:54:10] 2025-10-10 17:54:10,603 [wrapper] ==== wrapper stderr END ====
[2025-10-10 13:54:10]  *** Error codes and diagnostics ***
[2025-10-10 13:54:10]     "exeErrorCode": 0,
[2025-10-10 13:54:10]     "exeErrorDiag": "",
[2025-10-10 13:54:10]     "pilotErrorCode": 0,
[2025-10-10 13:54:10]     "pilotErrorDiag": "",
[2025-10-10 13:54:10]  *** Listing of results directory ***
[2025-10-10 13:54:10] total 412452
[2025-10-10 13:54:10] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 04:04 pilot3.tar.gz
[2025-10-10 13:54:10] -rwx------. 1 boincer umatlas     36292 Oct 10 04:15 runpilot2-wrapper.sh
[2025-10-10 13:54:10] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 04:15 queuedata.json
[2025-10-10 13:54:10] -rw-r--r--. 1 boincer umatlas       100 Oct 10 13:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 13:54:10] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 13:24 run_atlas
[2025-10-10 13:54:10] -rw-r--r--. 1 boincer umatlas       105 Oct 10 13:24 job.xml
[2025-10-10 13:54:10] -rw-r--r--. 2 boincer umatlas 218867623 Oct 10 13:24 EVNT.46676267._001431.pool.root.1
[2025-10-10 13:54:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 13:24 start_atlas.sh
[2025-10-10 13:54:10] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 13:24 shared
[2025-10-10 13:54:10] -rw-r--r--. 2 boincer umatlas    569680 Oct 10 13:24 input.tar.gz
[2025-10-10 13:54:10] -rw-r--r--. 1 boincer umatlas         0 Oct 10 13:24 boinc_lockfile
[2025-10-10 13:54:10] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 13:24 pandaJob.out
[2025-10-10 13:54:10] -rw-------. 1 boincer umatlas    975525 Oct 10 13:24 agis_schedconf.cvmfs.json
[2025-10-10 13:54:10] -rw-------. 1 boincer umatlas   1560580 Oct 10 13:25 agis_ddmendpoints.agis.ALL.json
[2025-10-10 13:54:10] drwx------. 5 boincer umatlas      4096 Oct 10 13:25 pilot3
[2025-10-10 13:54:10] -rw-r--r--. 1 boincer umatlas      7161 Oct 10 13:46 init_data.xml
[2025-10-10 13:54:10] -rw-------. 1 boincer umatlas 198327198 Oct 10 13:52 HITS.46676269._035196.pool.root.1
[2025-10-10 13:54:10] -rw-r--r--. 1 boincer umatlas       529 Oct 10 13:52 boinc_task_state.xml
[2025-10-10 13:54:10] -rw-------. 1 boincer umatlas      1030 Oct 10 13:52 memory_monitor_summary.json
[2025-10-10 13:54:10] -rw-------. 1 boincer umatlas    347363 Oct 10 13:52 log.46676269._035196.job.log.tgz.1
[2025-10-10 13:54:10] -rw-------. 1 boincer umatlas      7770 Oct 10 13:53 heartbeat.json
[2025-10-10 13:54:10] -rw-------. 1 boincer umatlas        95 Oct 10 13:53 pilot_heartbeat.json
[2025-10-10 13:54:10] -rw-r--r--. 1 boincer umatlas        27 Oct 10 13:53 wrapper_checkpoint.txt
[2025-10-10 13:54:10] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 13:53 boinc_mmap_file
[2025-10-10 13:54:10] -rw-------. 1 boincer umatlas      4823 Oct 10 13:54 pilotlog.txt
[2025-10-10 13:54:10] -rw-------. 1 boincer umatlas    281480 Oct 10 13:54 log.46676269._035196.job.log.1
[2025-10-10 13:54:10] -rw-------. 1 boincer umatlas       357 Oct 10 13:54 output.list
[2025-10-10 13:54:10] -rw-r--r--. 1 boincer umatlas       620 Oct 10 13:54 runtime_log
[2025-10-10 13:54:10] -rw-------. 1 boincer umatlas    645120 Oct 10 13:54 result.tar.gz
[2025-10-10 13:54:10] -rw-------. 1 boincer umatlas       647 Oct 10 13:54 TNJLDmeSNR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm0bPMDmdAe1Mm.diag
[2025-10-10 13:54:10] -rw-r--r--. 1 boincer umatlas      8695 Oct 10 13:54 runtime_log.err
[2025-10-10 13:54:10] -rw-r--r--. 1 boincer umatlas     22112 Oct 10 13:54 stderr.txt
[2025-10-10 13:54:10] HITS file was successfully produced:
[2025-10-10 13:54:10] -rw-------. 1 boincer umatlas 198327198 Oct 10 13:52 shared/HITS.pool.root.1
[2025-10-10 13:54:10]  *** Contents of shared directory: ***
[2025-10-10 13:54:10] total 408632
[2025-10-10 13:54:10] -rw-r--r--. 2 boincer umatlas 218867623 Oct 10 13:24 ATLAS.root_0
[2025-10-10 13:54:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 13:24 start_atlas.sh
[2025-10-10 13:54:10] -rw-r--r--. 2 boincer umatlas    569680 Oct 10 13:24 input.tar.gz
[2025-10-10 13:54:10] -rw-------. 1 boincer umatlas 198327198 Oct 10 13:52 HITS.pool.root.1
[2025-10-10 13:54:10] -rw-------. 1 boincer umatlas    645120 Oct 10 13:54 result.tar.gz
13:54:11 (150305): run_atlas exited; CPU time 17775.604349
13:54:11 (150305): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN