Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:11:28 (5216): wrapper (7.7.26015): starting
13:11:28 (5216): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 13:11:28] Arguments: --nthreads 12
[2025-10-10 13:11:28] Threads: 12
[2025-10-10 13:11:28] Checking for CVMFS
[2025-10-10 13:11:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 13:11:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 13:11:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 13:11:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 13:11:28] 2.11.2.0 2987 220239 98264 151555 2 59 11911943 20275200 1 130560 1 105744651 99.984 13306274 12173 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 13:11:28] CVMFS is ok
[2025-10-10 13:11:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 13:11:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 13:11:28] Further information can be found at the LHC@home message board.
[2025-10-10 13:11:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 13:11:28] Checking for apptainer binary...
[2025-10-10 13:11:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 13:11:28] Running /usr/bin/apptainer --version
[2025-10-10 13:11:28] apptainer version 1.3.2-1.el7
[2025-10-10 13:11:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 13:11:30] c-205-19.aglt2.org
[2025-10-10 13:11:30] apptainer works
[2025-10-10 13:11:30] Set ATHENA_PROC_NUMBER=12
[2025-10-10 13:11:30] Set ATHENA_CORE_NUMBER=12
[2025-10-10 13:11:30] Starting ATLAS job with PandaID=6826992859
[2025-10-10 13:11:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 14:16:58]  *** The last 200 lines of the pilot log: ***
[2025-10-10 14:16:58]  storage_token=
[2025-10-10 14:16:58]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6826992859/log.46376905._024372.job.log.tgz.1
[2025-10-10 14:16:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/55/log.46376905._024372.job.log.tgz.1
[2025-10-10 14:16:58]  workdir=None
[2025-10-10 14:16:58] ]
[2025-10-10 14:16:58] 2025-10-10 18:16:07,463 | INFO     | transferring file log.46376905._024372.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6826992859/log.46376905._024372.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-10 14:16:58] 2025-10-10 18:16:07,463 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6826992859/log.46376905._024372.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._024372.job
[2025-10-10 14:16:58] 2025-10-10 18:16:07,486 | INFO     | adding to output.list: log.46376905._024372.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/55/log.46376905._024372.job.log.tg
[2025-10-10 14:16:58] 2025-10-10 18:16:07,487 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 14:16:58] 2025-10-10 18:16:07,487 | INFO     | summary of transferred files:
[2025-10-10 14:16:58] 2025-10-10 18:16:07,488 | INFO     |  -- lfn=log.46376905._024372.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 14:16:58] 2025-10-10 18:16:07,488 | INFO     | stage-out finished correctly
[2025-10-10 14:16:58] 2025-10-10 18:16:07,730 | INFO     | monitor loop #289: job 0:6826992859 is in state 'finished'
[2025-10-10 14:16:58] 2025-10-10 18:16:07,730 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 14:16:58] 2025-10-10 18:16:08,104 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 14:16:58] 2025-10-10 18:16:08,896 | INFO     | time since job start (3863s) is within the limit (172800.0s)
[2025-10-10 14:16:58] 2025-10-10 18:16:10,233 | INFO     | monitor loop #290: job 0:6826992859 is in state 'finished'
[2025-10-10 14:16:58] 2025-10-10 18:16:10,233 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 14:16:58] 2025-10-10 18:16:10,761 | INFO     | job 6826992859 has state=finished
[2025-10-10 14:16:58] 2025-10-10 18:16:10,761 | INFO     | preparing for final server update for job 6826992859 in state='finished'
[2025-10-10 14:16:58] 2025-10-10 18:16:10,762 | INFO     | this job has now completed (state=finished)
[2025-10-10 14:16:58] 2025-10-10 18:16:10,762 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 14:16:58] 2025-10-10 18:16:10,762 | INFO     | log transfer has been attempted: DONE
[2025-10-10 14:16:58] 2025-10-10 18:16:10,763 | INFO     | job 6826992859 has finished - writing final server update
[2025-10-10 14:16:58] 2025-10-10 18:16:10,763 | INFO     | total number of processed events: 400 (read)
[2025-10-10 14:16:58] 2025-10-10 18:16:10,764 | INFO     | executing command: lscpu
[2025-10-10 14:16:58] 2025-10-10 18:16:10,792 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 14:16:58] 2025-10-10 18:16:10,902 | INFO     | time since job start (3865s) is within the limit (172800.0s)
[2025-10-10 14:16:58] 2025-10-10 18:16:12,743 | INFO     | monitor loop #291: job 0:6826992859 is in state 'finished'
[2025-10-10 14:16:58] 2025-10-10 18:16:12,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 14:16:58] 2025-10-10 18:16:12,908 | INFO     | time since job start (3867s) is within the limit (172800.0s)
[2025-10-10 14:16:58] 2025-10-10 18:16:14,913 | INFO     | time since job start (3869s) is within the limit (172800.0s)
[2025-10-10 14:16:58] 2025-10-10 18:16:15,246 | INFO     | monitor loop #292: job 0:6826992859 is in state 'finished'
[2025-10-10 14:16:58] 2025-10-10 18:16:15,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 14:16:58] 2025-10-10 18:16:15,555 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-10 14:16:58] 2025-10-10 18:16:15,558 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.8333333333333
[2025-10-10 14:16:58] 2025-10-10 18:16:15,560 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6826992859/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 14:16:58] 2025-10-10 18:16:15,560 | INFO     | extracted standard info from prmon json
[2025-10-10 14:16:58] 2025-10-10 18:16:15,561 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 14:16:58] 2025-10-10 18:16:15,561 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 14:16:58] 2025-10-10 18:16:15,561 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 14:16:58] 2025-10-10 18:16:15,561 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 14:16:58] 2025-10-10 18:16:15,562 | INFO     | fitting pss+swap vs Time
[2025-10-10 14:16:58] 2025-10-10 18:16:15,563 | INFO     | sum of square deviations: 54438230.0
[2025-10-10 14:16:58] 2025-10-10 18:16:15,563 | INFO     | sum of deviations: 8989692.000000075
[2025-10-10 14:16:58] 2025-10-10 18:16:15,563 | INFO     | mean x: 1760118316.5
[2025-10-10 14:16:58] 2025-10-10 18:16:15,563 | INFO     | mean y: 2726472.3571428573
[2025-10-10 14:16:58] 2025-10-10 18:16:15,563 | INFO     | -- intersect: -287931793.8813746
[2025-10-10 14:16:58] 2025-10-10 18:16:15,563 | INFO     | intersect: -287931793.8813746
[2025-10-10 14:16:58] 2025-10-10 18:16:15,564 | INFO     | chi2: 0.005689670824282268
[2025-10-10 14:16:58] 2025-10-10 18:16:15,564 | INFO     | -- intersect: -287931793.8813746
[2025-10-10 14:16:58] 2025-10-10 18:16:15,564 | INFO     | current memory leak: 0.17 B/s (using 56 data points, chi2=0.01)
[2025-10-10 14:16:58] 2025-10-10 18:16:15,564 | INFO     | could have reported an average CPU frequency of 2037 MHz (6 samples)
[2025-10-10 14:16:58] 2025-10-10 18:16:15,564 | INFO     | ..............................
[2025-10-10 14:16:58] 2025-10-10 18:16:15,564 | INFO     | . Timing measurements:
[2025-10-10 14:16:58] 2025-10-10 18:16:15,564 | INFO     | . get job = 0 s
[2025-10-10 14:16:58] 2025-10-10 18:16:15,565 | INFO     | . initial setup = 2 s
[2025-10-10 14:16:58] 2025-10-10 18:16:15,565 | INFO     | . payload setup = 7 s
[2025-10-10 14:16:58] 2025-10-10 18:16:15,565 | INFO     | . stage-in = 0 s
[2025-10-10 14:16:58] 2025-10-10 18:16:15,565 | INFO     | . payload execution = 3833 s
[2025-10-10 14:16:58] 2025-10-10 18:16:15,565 | INFO     | . stage-out = 0 s
[2025-10-10 14:16:58] 2025-10-10 18:16:15,565 | INFO     | . log creation = 0 s
[2025-10-10 14:16:58] 2025-10-10 18:16:15,565 | INFO     | ..............................
[2025-10-10 14:16:58] 2025-10-10 18:16:15,647 | INFO     | 
[2025-10-10 14:16:58] 2025-10-10 18:16:15,648 | INFO     | job summary report
[2025-10-10 14:16:58] 2025-10-10 18:16:15,648 | INFO     | --------------------------------------------------
[2025-10-10 14:16:58] 2025-10-10 18:16:15,648 | INFO     | PanDA job id: 6826992859
[2025-10-10 14:16:58] 2025-10-10 18:16:15,648 | INFO     | task id: 46376905
[2025-10-10 14:16:58] 2025-10-10 18:16:15,648 | INFO     | errors: (none)
[2025-10-10 14:16:58] 2025-10-10 18:16:15,649 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 14:16:58] 2025-10-10 18:16:15,649 | INFO     | pilot state: finished 
[2025-10-10 14:16:58] 2025-10-10 18:16:15,649 | INFO     | transexitcode: 0
[2025-10-10 14:16:58] 2025-10-10 18:16:15,649 | INFO     | exeerrorcode: 0
[2025-10-10 14:16:58] 2025-10-10 18:16:15,649 | INFO     | exeerrordiag: 
[2025-10-10 14:16:58] 2025-10-10 18:16:15,649 | INFO     | exitcode: 0
[2025-10-10 14:16:58] 2025-10-10 18:16:15,650 | INFO     | exitmsg: OK
[2025-10-10 14:16:58] 2025-10-10 18:16:15,650 | INFO     | cpuconsumptiontime: 41469 s
[2025-10-10 14:16:58] 2025-10-10 18:16:15,650 | INFO     | nevents: 400
[2025-10-10 14:16:58] 2025-10-10 18:16:15,650 | INFO     | neventsw: 0
[2025-10-10 14:16:58] 2025-10-10 18:16:15,650 | INFO     | pid: 15475
[2025-10-10 14:16:58] 2025-10-10 18:16:15,650 | INFO     | pgrp: 15475
[2025-10-10 14:16:58] 2025-10-10 18:16:15,651 | INFO     | corecount: 12
[2025-10-10 14:16:58] 2025-10-10 18:16:15,651 | INFO     | event service: False
[2025-10-10 14:16:58] 2025-10-10 18:16:15,651 | INFO     | sizes: {0: 2348814, 5: 2349076, 11: 2349132, 3844: 2374883, 3846: 2383937, 3854: 2384075}
[2025-10-10 14:16:58] 2025-10-10 18:16:15,651 | INFO     | --------------------------------------------------
[2025-10-10 14:16:58] 2025-10-10 18:16:15,651 | INFO     | 
[2025-10-10 14:16:58] 2025-10-10 18:16:15,651 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 14:16:58] 2025-10-10 18:16:15,676 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 14:16:58] 2025-10-10 18:16:15,677 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 14:16:58] 2025-10-10 18:16:15,677 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 14:16:58] 2025-10-10 18:16:15,677 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 14:16:58] 2025-10-10 18:16:15,677 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 14:16:58] 2025-10-10 18:16:15,677 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 14:16:58] 2025-10-10 18:16:15,678 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 14:16:58] 2025-10-10 18:16:15,678 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 14:16:58] 2025-10-10 18:16:15,678 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 14:16:58] 2025-10-10 18:16:15,678 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 14:16:58] 2025-10-10 18:16:15,678 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 14:16:58] 2025-10-10 18:16:15,678 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 14:16:58] 2025-10-10 18:16:15,679 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 14:16:58] 2025-10-10 18:16:15,679 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 14:16:58] 2025-10-10 18:16:15,679 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 14:16:58] 2025-10-10 18:16:15,679 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 14:16:58] 2025-10-10 18:16:15,679 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 14:16:58] 2025-10-10 18:16:15,679 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 14:16:58] 2025-10-10 18:16:15,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 14:16:58] 2025-10-10 18:16:15,680 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 14:16:58] 2025-10-10 18:16:15,680 | INFO     | job 6826992859 has completed (purged errors)
[2025-10-10 14:16:58] 2025-10-10 18:16:15,680 | INFO     | overall cleanup function is called
[2025-10-10 14:16:58] 2025-10-10 18:16:16,686 | INFO     | --- collectZombieJob: --- 10, [15475]
[2025-10-10 14:16:58] 2025-10-10 18:16:16,686 | INFO     | zombie collector waiting for pid 15475
[2025-10-10 14:16:58] 2025-10-10 18:16:16,686 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 14:16:58] 2025-10-10 18:16:16,686 | INFO     | collected zombie processes
[2025-10-10 14:16:58] 2025-10-10 18:16:16,686 | INFO     | will attempt to kill all subprocesses of pid=15475
[2025-10-10 14:16:58] 2025-10-10 18:16:16,778 | INFO     | process IDs to be killed: [15475] (in reverse order)
[2025-10-10 14:16:58] 2025-10-10 18:16:16,830 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 14:16:58] 2025-10-10 18:16:16,830 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 14:16:58] 2025-10-10 18:16:16,834 | INFO     | did not find any defunct processes belonging to 15475
[2025-10-10 14:16:58] 2025-10-10 18:16:16,837 | INFO     | did not find any defunct processes belonging to 15475
[2025-10-10 14:16:58] 2025-10-10 18:16:16,837 | INFO     | ready for new job
[2025-10-10 14:16:58] 2025-10-10 18:16:16,837 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 14:16:58] 2025-10-10 18:16:16,839 | INFO     | ***************************************
[2025-10-10 14:16:58] 2025-10-10 18:16:16,839 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 14:16:58] 2025-10-10 18:16:16,839 | INFO     | ***************************************
[2025-10-10 14:16:58] 2025-10-10 18:16:16,839 | INFO     | 
[2025-10-10 14:16:58] 2025-10-10 18:16:16,840 | INFO     | architecture information:
[2025-10-10 14:16:58] 2025-10-10 18:16:16,840 | INFO     | executing command: cat /etc/os-release
[2025-10-10 14:16:58] 2025-10-10 18:16:16,853 | INFO     | cat /etc/os-release:
[2025-10-10 14:16:58] NAME="CentOS Linux"
[2025-10-10 14:16:58] VERSION="7 (Core)"
[2025-10-10 14:16:58] ID="centos"
[2025-10-10 14:16:58] ID_LIKE="rhel fedora"
[2025-10-10 14:16:58] VERSION_ID="7"
[2025-10-10 14:16:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 14:16:58] ANSI_COLOR="0;31"
[2025-10-10 14:16:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 14:16:58] HOME_URL="https://www.centos.org/"
[2025-10-10 14:16:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 14:16:58] 
[2025-10-10 14:16:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 14:16:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 14:16:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 14:16:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 14:16:58] 
[2025-10-10 14:16:58] 2025-10-10 18:16:16,854 | INFO     | ***************************************
[2025-10-10 14:16:58] 2025-10-10 18:16:17,356 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 14:16:58] 2025-10-10 18:16:17,375 | INFO     | sufficient remaining disk space (29394731008 B)
[2025-10-10 14:16:58] 2025-10-10 18:16:17,375 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 14:16:58] 2025-10-10 18:16:17,376 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 14:16:58] 2025-10-10 18:16:17,376 | INFO     | update_server=False
[2025-10-10 14:16:58] 2025-10-10 18:16:17,376 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 14:16:58] 2025-10-10 18:16:17,376 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 14:16:58] 2025-10-10 18:16:17,639 | INFO     | all job control threads have been joined
[2025-10-10 14:16:58] 2025-10-10 18:16:17,754 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 14:16:58] 2025-10-10 18:16:17,755 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 14:16:58] 2025-10-10 18:16:17,755 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 14:16:58] 2025-10-10 18:16:17,755 | INFO     | will abort loop
[2025-10-10 14:16:58] 2025-10-10 18:16:18,097 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 14:16:58] 2025-10-10 18:16:18,160 | INFO     | all data control threads have been joined
[2025-10-10 14:16:58] 2025-10-10 18:16:18,377 | INFO     | [job] queue monitor thread has finished
[2025-10-10 14:16:58] 2025-10-10 18:16:18,382 | INFO     | [job] retrieve thread has finished
[2025-10-10 14:16:58] 2025-10-10 18:16:18,388 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 14:16:58] 2025-10-10 18:16:18,644 | INFO     | [job] control thread has finished
[2025-10-10 14:16:58] 2025-10-10 18:16:18,673 | INFO     | all payload control threads have been joined
[2025-10-10 14:16:58] 2025-10-10 18:16:18,687 | INFO     | [data] copytool_in thread has finished
[2025-10-10 14:16:58] 2025-10-10 18:16:18,692 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 14:16:58] 2025-10-10 18:16:18,761 | INFO     | [job] job monitor thread has finished
[2025-10-10 14:16:58] 2025-10-10 18:16:18,899 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 14:16:58] 2025-10-10 18:16:19,166 | INFO     | [data] control thread has finished
[2025-10-10 14:16:58] 2025-10-10 18:16:19,396 | INFO     | [job] validate thread has finished
[2025-10-10 14:16:58] 2025-10-10 18:16:19,679 | INFO     | [payload] control thread has finished
[2025-10-10 14:16:58] 2025-10-10 18:16:19,796 | INFO     | [payload] validate_post thread has finished
[2025-10-10 14:16:58] 2025-10-10 18:16:19,822 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 14:16:58] 2025-10-10 18:16:19,833 | INFO     | [payload] failed_post thread has finished
[2025-10-10 14:16:58] 2025-10-10 18:16:20,102 | INFO     | [data] copytool_out thread has finished
[2025-10-10 14:16:58] 2025-10-10 18:16:22,698 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 14:16:58] 2025-10-10 18:16:28,153 | INFO     | job.realtimelogging is not enabled
[2025-10-10 14:16:58] 2025-10-10 18:16:29,159 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 14:16:58] 2025-10-10 18:16:48,104 | INFO     | PID=8999 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-10 14:16:58] 2025-10-10 18:16:48,104 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 14:16:58] 2025-10-10 18:16:48,104 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 14:16:58] 2025-10-10 18:16:48,104 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 14:16:58] 2025-10-10 18:16:51,321 | INFO     | [monitor] cgroup control has ended
[2025-10-10 14:16:58] 2025-10-10 18:16:53,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140182438033216)>', '<ExcThread(monitor, started 140181382342400)>']
[2025-10-10 14:16:58] 2025-10-10 18:16:53,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 14:16:58] 2025-10-10 18:16:53,126 | INFO     | [monitor] control thread has ended
[2025-10-10 14:16:58] 2025-10-10 18:16:58,086 | INFO     | all workflow threads have been joined
[2025-10-10 14:16:58] 2025-10-10 18:16:58,086 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 14:16:58] 2025-10-10 18:16:58,087 | INFO     | traces error code: 0
[2025-10-10 14:16:58] 2025-10-10 18:16:58,087 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 14:16:58] 2025-10-10 18:16:58,171 [wrapper] ==== pilot stdout END ====
[2025-10-10 14:16:58] 2025-10-10 18:16:58,175 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 14:16:58] 2025-10-10 18:16:58,180 [wrapper] pilotpid: 8999
[2025-10-10 14:16:58] 2025-10-10 18:16:58,184 [wrapper] Pilot exit status: 0
[2025-10-10 14:16:58] 2025-10-10 18:16:58,200 [wrapper] pandaids: 6826992859
[2025-10-10 14:16:58] 2025-10-10 18:16:58,240 [wrapper] cleanup supervisor_pilot 18949 9000
[2025-10-10 14:16:58] 2025-10-10 18:16:58,244 [wrapper] Test setup, not cleaning
[2025-10-10 14:16:58] 2025-10-10 18:16:58,248 [wrapper] apfmon messages muted
[2025-10-10 14:16:58] 2025-10-10 18:16:58,252 [wrapper] ==== wrapper stdout END ====
[2025-10-10 14:16:58] 2025-10-10 18:16:58,256 [wrapper] ==== wrapper stderr END ====
[2025-10-10 14:16:58]  *** Error codes and diagnostics ***
[2025-10-10 14:16:58]     "exeErrorCode": 0,
[2025-10-10 14:16:58]     "exeErrorDiag": "",
[2025-10-10 14:16:58]     "pilotErrorCode": 0,
[2025-10-10 14:16:58]     "pilotErrorDiag": "",
[2025-10-10 14:16:58]  *** Listing of results directory ***
[2025-10-10 14:16:58] total 390612
[2025-10-10 14:16:58] -rw-r--r-- 1 boincer umatlas    552446 Oct  2 03:30 pilot3.tar.gz
[2025-10-10 14:16:58] -rwx------ 1 boincer umatlas     36292 Oct  2 03:42 runpilot2-wrapper.sh
[2025-10-10 14:16:58] -rw-r--r-- 1 boincer umatlas      5112 Oct  2 03:42 queuedata.json
[2025-10-10 14:16:58] -rw-r--r-- 1 boincer umatlas       100 Oct 10 13:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 14:16:58] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 13:11 run_atlas
[2025-10-10 14:16:58] -rw-r--r-- 1 boincer umatlas       105 Oct 10 13:11 job.xml
[2025-10-10 14:16:58] -rw-r--r-- 2 boincer umatlas 215023990 Oct 10 13:11 EVNT.46376901._000741.pool.root.1
[2025-10-10 14:16:58] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 13:11 start_atlas.sh
[2025-10-10 14:16:58] drwxrwx--x 2 boincer umatlas      4096 Oct 10 13:11 shared
[2025-10-10 14:16:58] -rw-r--r-- 2 boincer umatlas    565594 Oct 10 13:11 input.tar.gz
[2025-10-10 14:16:58] -rw-r--r-- 1 boincer umatlas         0 Oct 10 13:11 boinc_lockfile
[2025-10-10 14:16:58] -rw-r--r-- 1 boincer umatlas      2518 Oct 10 13:11 pandaJob.out
[2025-10-10 14:16:58] -rw------- 1 boincer umatlas    975525 Oct 10 13:11 agis_schedconf.cvmfs.json
[2025-10-10 14:16:58] -rw------- 1 boincer umatlas   1560580 Oct 10 13:11 agis_ddmendpoints.agis.ALL.json
[2025-10-10 14:16:58] drwx------ 4 boincer umatlas      4096 Oct 10 13:11 pilot3
[2025-10-10 14:16:58] -rw-r--r-- 1 boincer umatlas      5952 Oct 10 14:11 init_data.xml
[2025-10-10 14:16:58] -rw------- 1 boincer umatlas 179161372 Oct 10 14:15 HITS.46376905._024372.pool.root.1
[2025-10-10 14:16:58] -rw-r--r-- 1 boincer umatlas       529 Oct 10 14:15 boinc_task_state.xml
[2025-10-10 14:16:58] -rw------- 1 boincer umatlas      1049 Oct 10 14:16 memory_monitor_summary.json
[2025-10-10 14:16:58] -rw------- 1 boincer umatlas    387217 Oct 10 14:16 log.46376905._024372.job.log.tgz.1
[2025-10-10 14:16:58] -rw------- 1 boincer umatlas      7845 Oct 10 14:16 heartbeat.json
[2025-10-10 14:16:58] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 14:16 boinc_mmap_file
[2025-10-10 14:16:58] -rw-r--r-- 1 boincer umatlas        27 Oct 10 14:16 wrapper_checkpoint.txt
[2025-10-10 14:16:58] -rw------- 1 boincer umatlas        95 Oct 10 14:16 pilot_heartbeat.json
[2025-10-10 14:16:58] -rw------- 1 boincer umatlas      5003 Oct 10 14:16 pilotlog.txt
[2025-10-10 14:16:58] -rw------- 1 boincer umatlas    566540 Oct 10 14:16 log.46376905._024372.job.log.1
[2025-10-10 14:16:58] -rw------- 1 boincer umatlas       357 Oct 10 14:16 output.list
[2025-10-10 14:16:58] -rw-r--r-- 1 boincer umatlas       620 Oct 10 14:16 runtime_log
[2025-10-10 14:16:58] -rw------- 1 boincer umatlas    972800 Oct 10 14:16 result.tar.gz
[2025-10-10 14:16:58] -rw-r--r-- 1 boincer umatlas      8705 Oct 10 14:16 runtime_log.err
[2025-10-10 14:16:58] -rw------- 1 boincer umatlas       659 Oct 10 14:16 A7rMDmK8SO8n9Rq4apOajLDm4fhM0noT9bVof3QYDmt28LDm4X3KKn.diag
[2025-10-10 14:16:58] -rw-r--r-- 1 boincer umatlas     22137 Oct 10 14:16 stderr.txt
[2025-10-10 14:16:58] HITS file was successfully produced:
[2025-10-10 14:16:58] -rw------- 1 boincer umatlas 179161372 Oct 10 14:15 shared/HITS.pool.root.1
[2025-10-10 14:16:58]  *** Contents of shared directory: ***
[2025-10-10 14:16:58] total 386480
[2025-10-10 14:16:58] -rw-r--r-- 2 boincer umatlas 215023990 Oct 10 13:11 ATLAS.root_0
[2025-10-10 14:16:58] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 13:11 start_atlas.sh
[2025-10-10 14:16:58] -rw-r--r-- 2 boincer umatlas    565594 Oct 10 13:11 input.tar.gz
[2025-10-10 14:16:58] -rw------- 1 boincer umatlas 179161372 Oct 10 14:15 HITS.pool.root.1
[2025-10-10 14:16:58] -rw------- 1 boincer umatlas    972800 Oct 10 14:16 result.tar.gz
14:16:59 (5216): run_atlas exited; CPU time 41447.540022
14:16:59 (5216): called boinc_finish(0)

</stderr_txt>
]]>

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