Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:45 (1793945): wrapper (7.7.26015): starting
00:02:45 (1793945): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 00:02:45] Arguments: --nthreads 12
[2025-10-11 00:02:45] Threads: 12
[2025-10-11 00:02:45] Checking for CVMFS
[2025-10-11 00:02:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:02:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:02:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:02:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:02:49] 2.13.2.0 1061588 20686 360508 151571 3 63 37186814 40960000 51872 16776704 0 74681586 99.789 40965081 15761 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 00:02:49] CVMFS is ok
[2025-10-11 00:02:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:02:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:02:49] Further information can be found at the LHC@home message board.
[2025-10-11 00:02:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:02:49] Checking for apptainer binary...
[2025-10-11 00:02:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:02:49] Running /usr/bin/apptainer --version
[2025-10-11 00:02:49] apptainer version 1.4.3-1.el9
[2025-10-11 00:02:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:02:50] c-1-1.aglt2.org
[2025-10-11 00:02:50] apptainer works
[2025-10-11 00:02:50] Set ATHENA_PROC_NUMBER=12
[2025-10-11 00:02:50] Set ATHENA_CORE_NUMBER=12
[2025-10-11 00:02:50] Starting ATLAS job with PandaID=6837597346
[2025-10-11 00:02:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 08:16:45]  *** The last 200 lines of the pilot log: ***
[2025-10-11 08:16:45] 2025-10-11 12:15:26,627 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 08:16:45] 2025-10-11 12:15:26,886 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 08:16:45] 2025-10-11 12:15:26,938 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 1763.8565750000002
[2025-10-11 08:16:45] 2025-10-11 12:15:27,014 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837597346/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 08:16:45] 2025-10-11 12:15:27,016 | INFO     | extracted standard info from prmon json
[2025-10-11 08:16:45] 2025-10-11 12:15:27,016 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 08:16:45] 2025-10-11 12:15:27,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 08:16:45] 2025-10-11 12:15:27,017 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 08:16:45] 2025-10-11 12:15:27,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 08:16:45] 2025-10-11 12:15:27,059 | INFO     | fitting pss+swap vs Time
[2025-10-11 08:16:45] 2025-10-11 12:15:27,060 | INFO     | sum of square deviations: 33865329693.93514
[2025-10-11 08:16:45] 2025-10-11 12:15:27,110 | INFO     | sum of deviations: 387582897927.7452
[2025-10-11 08:16:45] 2025-10-11 12:15:27,110 | INFO     | mean x: 1760170253.2196653
[2025-10-11 08:16:45] 2025-10-11 12:15:27,110 | INFO     | mean y: 2607083.1548117157
[2025-10-11 08:16:45] 2025-10-11 12:15:27,110 | INFO     | -- intersect: -20142239984.767475
[2025-10-11 08:16:45] 2025-10-11 12:15:27,110 | INFO     | intersect: -20142239984.767475
[2025-10-11 08:16:45] 2025-10-11 12:15:27,128 | INFO     | chi2: 6.197301389207561
[2025-10-11 08:16:45] 2025-10-11 12:15:27,131 | INFO     | sum of square deviations: 32813719490.7188
[2025-10-11 08:16:45] 2025-10-11 12:15:27,151 | INFO     | sum of deviations: 447793348134.7019
[2025-10-11 08:16:45] 2025-10-11 12:15:27,152 | INFO     | mean x: 1760170100.7230444
[2025-10-11 08:16:45] 2025-10-11 12:15:27,152 | INFO     | mean y: 2615754.623678647
[2025-10-11 08:16:45] 2025-10-11 12:15:27,171 | INFO     | -- intersect: -24017595148.69388
[2025-10-11 08:16:45] 2025-10-11 12:15:27,171 | INFO     | intersect: -24017595148.69388
[2025-10-11 08:16:45] 2025-10-11 12:15:27,172 | INFO     | chi2: 4.777969519696546
[2025-10-11 08:16:45] 2025-10-11 12:15:27,172 | INFO     | current chi2=4.777969519696546 (change=22.90241801024466 %)
[2025-10-11 08:16:45] 2025-10-11 12:15:27,172 | INFO     | right removable region: 472
[2025-10-11 08:16:45] 2025-10-11 12:15:27,173 | INFO     | sum of square deviations: 32813567843.818184
[2025-10-11 08:16:45] 2025-10-11 12:15:27,190 | INFO     | sum of deviations: 237707746939.72748
[2025-10-11 08:16:45] 2025-10-11 12:15:27,191 | INFO     | mean x: 1760170405.7272727
[2025-10-11 08:16:45] 2025-10-11 12:15:27,191 | INFO     | mean y: 2628793.1839323468
[2025-10-11 08:16:45] 2025-10-11 12:15:27,191 | INFO     | -- intersect: -12748381501.304369
[2025-10-11 08:16:45] 2025-10-11 12:15:27,191 | INFO     | intersect: -12748381501.304369
[2025-10-11 08:16:45] 2025-10-11 12:15:27,192 | INFO     | chi2: 2.950478821340085
[2025-10-11 08:16:45] 2025-10-11 12:15:27,192 | INFO     | current chi2=2.950478821340085 (change=52.390909590450654 %)
[2025-10-11 08:16:45] 2025-10-11 12:15:27,197 | INFO     | sum of square deviations: 31783921697.991337
[2025-10-11 08:16:45] 2025-10-11 12:15:27,222 | INFO     | sum of deviations: 168473368015.92355
[2025-10-11 08:16:45] 2025-10-11 12:15:27,223 | INFO     | mean x: 1760170558.2264957
[2025-10-11 08:16:45] 2025-10-11 12:15:27,223 | INFO     | mean y: 2639031.0384615385
[2025-10-11 08:16:45] 2025-10-11 12:15:27,223 | INFO     | -- intersect: -9327294041.557383
[2025-10-11 08:16:45] 2025-10-11 12:15:27,223 | INFO     | intersect: -9327294041.557383
[2025-10-11 08:16:45] 2025-10-11 12:15:27,224 | INFO     | chi2: 2.2887850881300933
[2025-10-11 08:16:45] 2025-10-11 12:15:27,224 | INFO     | current chi2=2.2887850881300933 (change=22.426655918494465 %)
[2025-10-11 08:16:45] 2025-10-11 12:15:27,224 | INFO     | left removable region: 20
[2025-10-11 08:16:45] 2025-10-11 12:15:27,225 | INFO     | sum of square deviations: 28634128619.141556
[2025-10-11 08:16:45] 2025-10-11 12:15:27,244 | INFO     | sum of deviations: 138509827132.50443
[2025-10-11 08:16:45] 2025-10-11 12:15:27,245 | INFO     | mean x: 1760170680.2345133
[2025-10-11 08:16:45] 2025-10-11 12:15:27,245 | INFO     | mean y: 2662306.9292035396
[2025-10-11 08:16:45] 2025-10-11 12:15:27,245 | INFO     | -- intersect: -8511685724.60151
[2025-10-11 08:16:45] 2025-10-11 12:15:27,245 | INFO     | intersect: -8511685724.60151
[2025-10-11 08:16:45] 2025-10-11 12:15:27,250 | INFO     | chi2: 0.31714308462439483
[2025-10-11 08:16:45] 2025-10-11 12:15:27,251 | INFO     | -- intersect: -8511685724.60151
[2025-10-11 08:16:45] 2025-10-11 12:15:27,251 | INFO     | current memory leak: 4.84 B/s (using 452 data points, chi2=0.32)
[2025-10-11 08:16:45] 2025-10-11 12:15:27,252 | INFO     | could have reported an average CPU frequency of 1780 MHz (19 samples)
[2025-10-11 08:16:45] 2025-10-11 12:15:27,252 | INFO     | ..............................
[2025-10-11 08:16:45] 2025-10-11 12:15:27,252 | INFO     | . Timing measurements:
[2025-10-11 08:16:45] 2025-10-11 12:15:27,252 | INFO     | . get job = 1 s
[2025-10-11 08:16:45] 2025-10-11 12:15:27,252 | INFO     | . initial setup = 8 s
[2025-10-11 08:16:45] 2025-10-11 12:15:27,253 | INFO     | . payload setup = 66 s
[2025-10-11 08:16:45] 2025-10-11 12:15:27,253 | INFO     | . stage-in = 0 s
[2025-10-11 08:16:45] 2025-10-11 12:15:27,253 | INFO     | . payload execution = 29194 s
[2025-10-11 08:16:45] 2025-10-11 12:15:27,253 | INFO     | . stage-out = 12 s
[2025-10-11 08:16:45] 2025-10-11 12:15:27,253 | INFO     | . log creation = 2 s
[2025-10-11 08:16:45] 2025-10-11 12:15:27,253 | INFO     | ..............................
[2025-10-11 08:16:45] 2025-10-11 12:15:29,443 | INFO     | 
[2025-10-11 08:16:45] 2025-10-11 12:15:29,443 | INFO     | job summary report
[2025-10-11 08:16:45] 2025-10-11 12:15:29,443 | INFO     | --------------------------------------------------
[2025-10-11 08:16:45] 2025-10-11 12:15:29,444 | INFO     | PanDA job id: 6837597346
[2025-10-11 08:16:45] 2025-10-11 12:15:29,444 | INFO     | task id: 46676269
[2025-10-11 08:16:45] 2025-10-11 12:15:29,444 | INFO     | errors: (none)
[2025-10-11 08:16:45] 2025-10-11 12:15:29,444 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 08:16:45] 2025-10-11 12:15:29,444 | INFO     | pilot state: finished 
[2025-10-11 08:16:45] 2025-10-11 12:15:29,444 | INFO     | transexitcode: 0
[2025-10-11 08:16:45] 2025-10-11 12:15:29,444 | INFO     | exeerrorcode: 0
[2025-10-11 08:16:45] 2025-10-11 12:15:29,445 | INFO     | exeerrordiag: 
[2025-10-11 08:16:45] 2025-10-11 12:15:29,445 | INFO     | exitcode: 0
[2025-10-11 08:16:45] 2025-10-11 12:15:29,445 | INFO     | exitmsg: OK
[2025-10-11 08:16:45] 2025-10-11 12:15:29,445 | INFO     | cpuconsumptiontime: 69476 s
[2025-10-11 08:16:45] 2025-10-11 12:15:29,445 | INFO     | nevents: 400
[2025-10-11 08:16:45] 2025-10-11 12:15:29,445 | INFO     | neventsw: 0
[2025-10-11 08:16:45] 2025-10-11 12:15:29,445 | INFO     | pid: 1822129
[2025-10-11 08:16:45] 2025-10-11 12:15:29,445 | INFO     | pgrp: 1822129
[2025-10-11 08:16:45] 2025-10-11 12:15:29,446 | INFO     | corecount: 12
[2025-10-11 08:16:45] 2025-10-11 12:15:29,446 | INFO     | event service: False
[2025-10-11 08:16:45] 2025-10-11 12:15:29,449 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348714, 3: 2348742, 4: 2348742, 6: 2349097, 17: 2349097, 29: 2349125, 42: 2349153, 50: 2349471, 55: 2349499, 29264: 2385301, 29
[2025-10-11 08:16:45] 2025-10-11 12:15:29,449 | INFO     | --------------------------------------------------
[2025-10-11 08:16:45] 2025-10-11 12:15:29,450 | INFO     | 
[2025-10-11 08:16:45] 2025-10-11 12:15:29,450 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 08:16:45] 2025-10-11 12:15:29,578 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 08:16:45] 2025-10-11 12:15:29,578 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 08:16:45] 2025-10-11 12:15:29,582 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 08:16:45] 2025-10-11 12:15:29,582 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 08:16:45] 2025-10-11 12:15:29,582 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 08:16:45] 2025-10-11 12:15:29,582 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 08:16:45] 2025-10-11 12:15:29,583 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 08:16:45] 2025-10-11 12:15:29,583 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 08:16:45] 2025-10-11 12:15:29,583 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 08:16:45] 2025-10-11 12:15:29,583 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 08:16:45] 2025-10-11 12:15:29,583 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 08:16:45] 2025-10-11 12:15:29,583 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 08:16:45] 2025-10-11 12:15:29,583 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 08:16:45] 2025-10-11 12:15:29,583 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 08:16:45] 2025-10-11 12:15:29,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 08:16:45] 2025-10-11 12:15:29,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 08:16:45] 2025-10-11 12:15:29,585 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 08:16:45] 2025-10-11 12:15:29,585 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 08:16:45] 2025-10-11 12:15:29,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 08:16:45] 2025-10-11 12:15:29,585 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 08:16:45] 2025-10-11 12:15:29,585 | INFO     | job 6837597346 has completed (purged errors)
[2025-10-11 08:16:45] 2025-10-11 12:15:29,586 | INFO     | overall cleanup function is called
[2025-10-11 08:16:45] 2025-10-11 12:15:30,677 | INFO     | --- collectZombieJob: --- 10, [1822129]
[2025-10-11 08:16:45] 2025-10-11 12:15:30,677 | INFO     | zombie collector waiting for pid 1822129
[2025-10-11 08:16:45] 2025-10-11 12:15:30,677 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 08:16:45] 2025-10-11 12:15:30,677 | INFO     | collected zombie processes
[2025-10-11 08:16:45] 2025-10-11 12:15:30,678 | INFO     | will attempt to kill all subprocesses of pid=1822129
[2025-10-11 08:16:45] 2025-10-11 12:15:31,055 | INFO     | PID=1802367 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 08:16:45] 2025-10-11 12:15:31,055 | INFO     | .. there are 78 such processes running
[2025-10-11 08:16:45] 2025-10-11 12:15:37,964 | INFO     | process IDs to be killed: [1822129] (in reverse order)
[2025-10-11 08:16:45] 2025-10-11 12:15:38,861 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 08:16:45] 2025-10-11 12:15:38,862 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 08:16:45] 2025-10-11 12:15:38,900 | INFO     | did not find any defunct processes belonging to 1822129
[2025-10-11 08:16:45] 2025-10-11 12:15:38,961 | INFO     | did not find any defunct processes belonging to 1822129
[2025-10-11 08:16:45] 2025-10-11 12:15:38,961 | INFO     | ready for new job
[2025-10-11 08:16:45] 2025-10-11 12:15:38,961 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 08:16:45] 2025-10-11 12:15:38,986 | INFO     | ***************************************
[2025-10-11 08:16:45] 2025-10-11 12:15:38,986 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 08:16:45] 2025-10-11 12:15:38,986 | INFO     | ***************************************
[2025-10-11 08:16:45] 2025-10-11 12:15:38,986 | INFO     | 
[2025-10-11 08:16:45] 2025-10-11 12:15:39,066 | INFO     | architecture information:
[2025-10-11 08:16:45] 2025-10-11 12:15:39,086 | INFO     | executing command: cat /etc/os-release
[2025-10-11 08:16:45] 2025-10-11 12:15:39,228 | INFO     | cat /etc/os-release:
[2025-10-11 08:16:45] NAME="CentOS Linux"
[2025-10-11 08:16:45] VERSION="7 (Core)"
[2025-10-11 08:16:45] ID="centos"
[2025-10-11 08:16:45] ID_LIKE="rhel fedora"
[2025-10-11 08:16:45] VERSION_ID="7"
[2025-10-11 08:16:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 08:16:45] ANSI_COLOR="0;31"
[2025-10-11 08:16:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 08:16:45] HOME_URL="https://www.centos.org/"
[2025-10-11 08:16:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 08:16:45] 
[2025-10-11 08:16:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 08:16:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 08:16:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 08:16:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 08:16:45] 
[2025-10-11 08:16:45] 2025-10-11 12:15:39,229 | INFO     | ***************************************
[2025-10-11 08:16:45] 2025-10-11 12:15:39,752 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 08:16:45] 2025-10-11 12:15:39,881 | INFO     | sufficient remaining disk space (106335043584 B)
[2025-10-11 08:16:45] 2025-10-11 12:15:39,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 08:16:45] 2025-10-11 12:15:39,882 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 08:16:45] 2025-10-11 12:15:39,882 | INFO     | update_server=False
[2025-10-11 08:16:45] 2025-10-11 12:15:39,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 08:16:45] 2025-10-11 12:15:40,185 | INFO     | all data control threads have been joined
[2025-10-11 08:16:45] 2025-10-11 12:15:40,437 | INFO     | all job control threads have been joined
[2025-10-11 08:16:45] 2025-10-11 12:15:40,476 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:16:45] 2025-10-11 12:15:40,476 | INFO     | aborting loop
[2025-10-11 08:16:45] 2025-10-11 12:15:40,890 | INFO     | [job] retrieve thread has finished
[2025-10-11 08:16:45] 2025-10-11 12:15:40,948 | INFO     | [job] validate thread has finished
[2025-10-11 08:16:45] 2025-10-11 12:15:41,056 | INFO     | all payload control threads have been joined
[2025-10-11 08:16:45] 2025-10-11 12:15:41,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 08:16:45] 2025-10-11 12:15:41,147 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 08:16:45] 2025-10-11 12:15:41,191 | INFO     | [data] control thread has finished
[2025-10-11 08:16:45] 2025-10-11 12:15:41,365 | INFO     | [payload] failed_post thread has finished
[2025-10-11 08:16:45] 2025-10-11 12:15:41,366 | INFO     | [payload] validate_post thread has finished
[2025-10-11 08:16:45] 2025-10-11 12:15:41,442 | INFO     | [job] control thread has finished
[2025-10-11 08:16:45] 2025-10-11 12:15:41,493 | INFO     | [job] job monitor thread has finished
[2025-10-11 08:16:45] 2025-10-11 12:15:41,511 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 08:16:45] 2025-10-11 12:15:42,062 | INFO     | [payload] control thread has finished
[2025-10-11 08:16:45] 2025-10-11 12:15:42,154 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:16:45] 2025-10-11 12:15:42,344 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 08:16:45] 2025-10-11 12:15:42,349 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 08:16:45] 2025-10-11 12:15:42,349 | INFO     | [data] copytool_in thread has finished
[2025-10-11 08:16:45] 2025-10-11 12:15:42,364 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 08:16:45] 2025-10-11 12:15:43,081 | INFO     | [data] copytool_out thread has finished
[2025-10-11 08:16:45] 2025-10-11 12:15:43,162 | INFO     | [job] queue monitor thread has finished
[2025-10-11 08:16:45] 2025-10-11 12:15:46,397 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 08:16:45] 2025-10-11 12:16:10,096 | INFO     | PID=1802367 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 08:16:45] 2025-10-11 12:16:10,096 | INFO     | .. there are 79 such processes running
[2025-10-11 08:16:45] 2025-10-11 12:16:10,097 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 08:16:45] 2025-10-11 12:16:10,097 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 08:16:45] 2025-10-11 12:16:10,098 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 08:16:45] 2025-10-11 12:16:37,339 | INFO     | [monitor] cgroup control has ended
[2025-10-11 08:16:45] 2025-10-11 12:16:37,754 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139679043905344)>', '<ExcThread(monitor, started 139678544017152)>']
[2025-10-11 08:16:45] 2025-10-11 12:16:38,368 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 08:16:45] 2025-10-11 12:16:38,368 | INFO     | [monitor] control thread has ended
[2025-10-11 08:16:45] 2025-10-11 12:16:42,787 | INFO     | all workflow threads have been joined
[2025-10-11 08:16:45] 2025-10-11 12:16:42,787 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 08:16:45] 2025-10-11 12:16:42,788 | INFO     | traces error code: 0
[2025-10-11 08:16:45] 2025-10-11 12:16:42,788 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 08:16:45] 2025-10-11 12:16:43,652 [wrapper] ==== pilot stdout END ====
[2025-10-11 08:16:45] 2025-10-11 12:16:43,685 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 08:16:45] 2025-10-11 12:16:43,724 [wrapper] pilotpid: 1802367
[2025-10-11 08:16:45] 2025-10-11 12:16:43,782 [wrapper] Pilot exit status: 0
[2025-10-11 08:16:45] 2025-10-11 12:16:43,860 [wrapper] pandaids: 6837597346
[2025-10-11 08:16:45] 2025-10-11 12:16:44,125 [wrapper] cleanup supervisor_pilot 3631610 1802368
[2025-10-11 08:16:45] 2025-10-11 12:16:44,142 [wrapper] Test setup, not cleaning
[2025-10-11 08:16:45] 2025-10-11 12:16:44,168 [wrapper] apfmon messages muted
[2025-10-11 08:16:45] 2025-10-11 12:16:44,185 [wrapper] ==== wrapper stdout END ====
[2025-10-11 08:16:45] 2025-10-11 12:16:44,193 [wrapper] ==== wrapper stderr END ====
[2025-10-11 08:16:45]  *** Error codes and diagnostics ***
[2025-10-11 08:16:45]     "exeErrorCode": 0,
[2025-10-11 08:16:45]     "exeErrorDiag": "",
[2025-10-11 08:16:45]     "pilotErrorCode": 0,
[2025-10-11 08:16:45]     "pilotErrorDiag": "",
[2025-10-11 08:16:45]  *** Listing of results directory ***
[2025-10-11 08:16:45] total 412480
[2025-10-11 08:16:45] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 07:21 pilot3.tar.gz
[2025-10-11 08:16:45] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 07:27 queuedata.json
[2025-10-11 08:16:45] -rwx------. 1 boincer umatlas     36292 Oct 10 07:28 runpilot2-wrapper.sh
[2025-10-11 08:16:45] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 08:16:45] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:02 run_atlas
[2025-10-11 08:16:45] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:02 job.xml
[2025-10-11 08:16:45] -rw-r--r--. 2 boincer umatlas 219561799 Oct 11 00:02 EVNT.46676267._001527.pool.root.1
[2025-10-11 08:16:45] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-11 08:16:45] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:02 shared
[2025-10-11 08:16:45] -rw-r--r--. 2 boincer umatlas    569685 Oct 11 00:02 input.tar.gz
[2025-10-11 08:16:45] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:02 boinc_lockfile
[2025-10-11 08:16:45] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 00:02 pandaJob.out
[2025-10-11 08:16:45] -rw-------. 1 boincer umatlas    975509 Oct 11 00:04 agis_schedconf.cvmfs.json
[2025-10-11 08:16:45] drwx------. 5 boincer umatlas      4096 Oct 11 00:04 pilot3
[2025-10-11 08:16:45] -rw-------. 1 boincer umatlas 192376294 Oct 11 08:11 HITS.46676269._037600.pool.root.1
[2025-10-11 08:16:45] -rw-r--r--. 1 boincer umatlas      6840 Oct 11 08:11 init_data.xml
[2025-10-11 08:16:45] -rw-r--r--. 1 boincer umatlas       531 Oct 11 08:11 boinc_task_state.xml
[2025-10-11 08:16:45] -rw-------. 1 boincer umatlas      1041 Oct 11 08:14 memory_monitor_summary.json
[2025-10-11 08:16:45] -rw-------. 1 boincer umatlas   1560580 Oct 11 08:14 agis_ddmendpoints.agis.ALL.json
[2025-10-11 08:16:45] -rw-------. 1 boincer umatlas    640527 Oct 11 08:14 log.46676269._037600.job.log.tgz.1
[2025-10-11 08:16:45] -rw-------. 1 boincer umatlas      7821 Oct 11 08:15 heartbeat.json
[2025-10-11 08:16:45] -rw-------. 1 boincer umatlas        95 Oct 11 08:16 pilot_heartbeat.json
[2025-10-11 08:16:45] -rw-------. 1 boincer umatlas      4825 Oct 11 08:16 pilotlog.txt
[2025-10-11 08:16:45] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 08:16 boinc_mmap_file
[2025-10-11 08:16:45] -rw-r--r--. 1 boincer umatlas        28 Oct 11 08:16 wrapper_checkpoint.txt
[2025-10-11 08:16:45] -rw-------. 1 boincer umatlas   2632121 Oct 11 08:16 log.46676269._037600.job.log.1
[2025-10-11 08:16:45] -rw-------. 1 boincer umatlas       357 Oct 11 08:16 output.list
[2025-10-11 08:16:45] -rw-r--r--. 1 boincer umatlas       620 Oct 11 08:16 runtime_log
[2025-10-11 08:16:45] -rw-------. 1 boincer umatlas   3287040 Oct 11 08:16 result.tar.gz
[2025-10-11 08:16:45] -rw-r--r--. 1 boincer umatlas      8691 Oct 11 08:16 runtime_log.err
[2025-10-11 08:16:45] -rw-------. 1 boincer umatlas       655 Oct 11 08:16 oMSKDmDTQR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMBdNDmhUuaCn.diag
[2025-10-11 08:16:45] -rw-r--r--. 1 boincer umatlas     21340 Oct 11 08:16 stderr.txt
[2025-10-11 08:16:45] HITS file was successfully produced:
[2025-10-11 08:16:45] -rw-------. 1 boincer umatlas 192376294 Oct 11 08:11 shared/HITS.pool.root.1
[2025-10-11 08:16:45]  *** Contents of shared directory: ***
[2025-10-11 08:16:45] total 406076
[2025-10-11 08:16:45] -rw-r--r--. 2 boincer umatlas 219561799 Oct 11 00:02 ATLAS.root_0
[2025-10-11 08:16:45] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-11 08:16:45] -rw-r--r--. 2 boincer umatlas    569685 Oct 11 00:02 input.tar.gz
[2025-10-11 08:16:45] -rw-------. 1 boincer umatlas 192376294 Oct 11 08:11 HITS.pool.root.1
[2025-10-11 08:16:45] -rw-------. 1 boincer umatlas   3287040 Oct 11 08:16 result.tar.gz
08:16:46 (1793945): run_atlas exited; CPU time 71606.179231
08:16:46 (1793945): called boinc_finish(0)

</stderr_txt>
]]>

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