Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:03:11 (1692186): wrapper (7.7.26015): starting
17:03:11 (1692186): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 17:03:11] Arguments: --nthreads 4
[2025-10-11 17:03:11] Threads: 4
[2025-10-11 17:03:11] Checking for CVMFS
[2025-10-11 17:03:11] No cvmfs_config command found, will try listing directly
[2025-10-11 17:03:11] CVMFS is ok
[2025-10-11 17:03:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 17:03:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 17:03:11] Further information can be found at the LHC@home message board.
[2025-10-11 17:03:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 17:03:11] Checking for apptainer binary...
[2025-10-11 17:03:11] which: no apptainer in ((null))
[2025-10-11 17:03:11] apptainer is not installed, using version from CVMFS
[2025-10-11 17:03:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 17:03:11] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-10-11 17:03:11] apptainer works
[2025-10-11 17:03:11] Set ATHENA_PROC_NUMBER=4
[2025-10-11 17:03:11] Set ATHENA_CORE_NUMBER=4
[2025-10-11 17:03:11] Starting ATLAS job with PandaID=6837511358
[2025-10-11 17:03:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:27:16 (2072360): wrapper (7.7.26015): starting
19:27:16 (2072360): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 19:27:16] Arguments: --nthreads 4
[2025-10-11 19:27:16] Threads: 4
[2025-10-11 19:27:16] This job has been restarted, cleaning up previous attempt
[2025-10-11 19:27:16] Checking for CVMFS
[2025-10-11 19:27:16] No cvmfs_config command found, will try listing directly
[2025-10-11 19:27:16] CVMFS is ok
[2025-10-11 19:27:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:27:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:27:16] Further information can be found at the LHC@home message board.
[2025-10-11 19:27:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:27:16] Checking for apptainer binary...
[2025-10-11 19:27:16] which: no apptainer in ((null))
[2025-10-11 19:27:16] apptainer is not installed, using version from CVMFS
[2025-10-11 19:27:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:27:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-10-11 19:27:16] apptainer works
[2025-10-11 19:27:16] Set ATHENA_PROC_NUMBER=4
[2025-10-11 19:27:16] Set ATHENA_CORE_NUMBER=4
[2025-10-11 19:27:16] Starting ATLAS job with PandaID=6837511358
[2025-10-11 19:27:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:19:31]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:19:31] 2025-10-11 20:09:49,582 | INFO     | intersect: 16927924993.692509
[2025-10-11 22:19:31] 2025-10-11 20:09:49,582 | INFO     | chi2: 0.04138001358637505
[2025-10-11 22:19:31] 2025-10-11 20:09:49,582 | INFO     | current chi2=0.04138001358637505 (change=25.36465032022678 %)
[2025-10-11 22:19:31] 2025-10-11 20:09:49,582 | INFO     | sum of square deviations: 746051197.5
[2025-10-11 22:19:31] 2025-10-11 20:09:49,583 | INFO     | sum of deviations: -4070313876.9999995
[2025-10-11 22:19:31] 2025-10-11 20:09:49,583 | INFO     | mean x: 1760209265.5
[2025-10-11 22:19:31] 2025-10-11 20:09:49,583 | INFO     | mean y: 2345267.731343284
[2025-10-11 22:19:31] 2025-10-11 20:09:49,584 | INFO     | -- intersect: 9605713272.228952
[2025-10-11 22:19:31] 2025-10-11 20:09:49,584 | INFO     | intersect: 9605713272.228952
[2025-10-11 22:19:31] 2025-10-11 20:09:49,584 | INFO     | chi2: 0.019748603888301308
[2025-10-11 22:19:31] 2025-10-11 20:09:49,584 | INFO     | current chi2=0.019748603888301308 (change=52.27501835619549 %)
[2025-10-11 22:19:31] 2025-10-11 20:09:49,584 | INFO     | sum of square deviations: 665612480.0
[2025-10-11 22:19:31] 2025-10-11 20:09:49,585 | INFO     | sum of deviations: -1753321719.0000005
[2025-10-11 22:19:31] 2025-10-11 20:09:49,585 | INFO     | mean x: 1760209418.0
[2025-10-11 22:19:31] 2025-10-11 20:09:49,585 | INFO     | mean y: 2340897.7596899224
[2025-10-11 22:19:31] 2025-10-11 20:09:49,585 | INFO     | -- intersect: 4638992846.604985
[2025-10-11 22:19:31] 2025-10-11 20:09:49,585 | INFO     | intersect: 4638992846.604985
[2025-10-11 22:19:31] 2025-10-11 20:09:49,586 | INFO     | chi2: 0.009591519748978384
[2025-10-11 22:19:31] 2025-10-11 20:09:49,586 | INFO     | current chi2=0.009591519748978384 (change=51.43190980370913 %)
[2025-10-11 22:19:31] 2025-10-11 20:09:49,586 | INFO     | sum of square deviations: 591173875.0
[2025-10-11 22:19:31] 2025-10-11 20:09:49,587 | INFO     | sum of deviations: 107728562.00000006
[2025-10-11 22:19:31] 2025-10-11 20:09:49,587 | INFO     | mean x: 1760209570.5
[2025-10-11 22:19:31] 2025-10-11 20:09:49,587 | INFO     | mean y: 2337083.2741935486
[2025-10-11 22:19:31] 2025-10-11 20:09:49,587 | INFO     | -- intersect: -318422770.7511602
[2025-10-11 22:19:31] 2025-10-11 20:09:49,587 | INFO     | intersect: -318422770.7511602
[2025-10-11 22:19:31] 2025-10-11 20:09:49,587 | INFO     | chi2: 0.0020135528410505626
[2025-10-11 22:19:31] 2025-10-11 20:09:49,587 | INFO     | current chi2=0.0020135528410505626 (change=79.0069468264919 %)
[2025-10-11 22:19:31] 2025-10-11 20:09:49,588 | INFO     | sum of square deviations: 522502820.0
[2025-10-11 22:19:31] 2025-10-11 20:09:49,588 | INFO     | sum of deviations: 698089246.0
[2025-10-11 22:19:31] 2025-10-11 20:09:49,588 | INFO     | mean x: 1760209723.0
[2025-10-11 22:19:31] 2025-10-11 20:09:49,588 | INFO     | mean y: 2335798.705882353
[2025-10-11 22:19:31] 2025-10-11 20:09:49,589 | INFO     | -- intersect: -2349390223.2339396
[2025-10-11 22:19:31] 2025-10-11 20:09:49,589 | INFO     | intersect: -2349390223.2339396
[2025-10-11 22:19:31] 2025-10-11 20:09:49,589 | INFO     | chi2: 7.245554910317348e-05
[2025-10-11 22:19:31] 2025-10-11 20:09:49,589 | INFO     | current chi2=7.245554910317348e-05 (change=96.4016067705792 %)
[2025-10-11 22:19:31] 2025-10-11 20:09:49,589 | INFO     | sum of square deviations: 459366752.5
[2025-10-11 22:19:31] 2025-10-11 20:09:49,590 | INFO     | sum of deviations: 629953893.0
[2025-10-11 22:19:31] 2025-10-11 20:09:49,590 | INFO     | mean x: 1760209875.5
[2025-10-11 22:19:31] 2025-10-11 20:09:49,590 | INFO     | mean y: 2335962.052631579
[2025-10-11 22:19:31] 2025-10-11 20:09:49,590 | INFO     | -- intersect: -2411532820.4258533
[2025-10-11 22:19:31] 2025-10-11 20:09:49,590 | INFO     | intersect: -2411532820.4258533
[2025-10-11 22:19:31] 2025-10-11 20:09:49,590 | INFO     | chi2: 6.99916011261221e-05
[2025-10-11 22:19:31] 2025-10-11 20:09:49,591 | INFO     | current chi2=6.99916011261221e-05 (change=3.4006339163102854 %)
[2025-10-11 22:19:31] 2025-10-11 20:09:49,591 | INFO     | left removable region: 90
[2025-10-11 22:19:31] 2025-10-11 20:09:49,591 | INFO     | sum of square deviations: 77515872.0
[2025-10-11 22:19:31] 2025-10-11 20:09:49,591 | INFO     | sum of deviations: 83037958.0
[2025-10-11 22:19:31] 2025-10-11 20:09:49,591 | INFO     | mean x: 1760211065.0
[2025-10-11 22:19:31] 2025-10-11 20:09:49,591 | INFO     | mean y: 2336960.873015873
[2025-10-11 22:19:31] 2025-10-11 20:09:49,591 | INFO     | -- intersect: -1883268254.1028962
[2025-10-11 22:19:31] 2025-10-11 20:09:49,592 | INFO     | intersect: -1883268254.1028962
[2025-10-11 22:19:31] 2025-10-11 20:09:49,592 | INFO     | chi2: 2.20797120546199e-05
[2025-10-11 22:19:31] 2025-10-11 20:09:49,592 | INFO     | -- intersect: -1883268254.1028962
[2025-10-11 22:19:31] 2025-10-11 20:09:49,592 | INFO     | current memory leak: 1.07 B/s (using 63 data points, chi2=0.00)
[2025-10-11 22:19:31] 2025-10-11 20:09:49,592 | INFO     | could have reported an average CPU frequency of 2692 MHz (9 samples)
[2025-10-11 22:19:31] 2025-10-11 20:09:49,593 | INFO     | ..............................
[2025-10-11 22:19:31] 2025-10-11 20:09:49,593 | INFO     | . Timing measurements:
[2025-10-11 22:19:31] 2025-10-11 20:09:49,593 | INFO     | . get job = 0 s
[2025-10-11 22:19:31] 2025-10-11 20:09:49,593 | INFO     | . initial setup = 1 s
[2025-10-11 22:19:31] 2025-10-11 20:09:49,593 | INFO     | . payload setup = 8 s
[2025-10-11 22:19:31] 2025-10-11 20:09:49,593 | INFO     | . stage-in = 0 s
[2025-10-11 22:19:31] 2025-10-11 20:09:49,593 | INFO     | . payload execution = 9698 s
[2025-10-11 22:19:31] 2025-10-11 20:09:49,593 | INFO     | . stage-out = 1 s
[2025-10-11 22:19:31] 2025-10-11 20:09:49,593 | INFO     | . log creation = 0 s
[2025-10-11 22:19:31] 2025-10-11 20:09:49,593 | INFO     | ..............................
[2025-10-11 22:19:31] 2025-10-11 20:09:49,944 | INFO     | 
[2025-10-11 22:19:31] 2025-10-11 20:09:49,944 | INFO     | job summary report
[2025-10-11 22:19:31] 2025-10-11 20:09:49,944 | INFO     | --------------------------------------------------
[2025-10-11 22:19:31] 2025-10-11 20:09:49,944 | INFO     | PanDA job id: 6837511358
[2025-10-11 22:19:31] 2025-10-11 20:09:49,944 | INFO     | task id: 46676269
[2025-10-11 22:19:31] 2025-10-11 20:09:49,945 | INFO     | errors: (none)
[2025-10-11 22:19:31] 2025-10-11 20:09:49,945 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:19:31] 2025-10-11 20:09:49,945 | INFO     | pilot state: finished 
[2025-10-11 22:19:31] 2025-10-11 20:09:49,945 | INFO     | transexitcode: 0
[2025-10-11 22:19:31] 2025-10-11 20:09:49,945 | INFO     | exeerrorcode: 0
[2025-10-11 22:19:31] 2025-10-11 20:09:49,945 | INFO     | exeerrordiag: 
[2025-10-11 22:19:31] 2025-10-11 20:09:49,945 | INFO     | exitcode: 0
[2025-10-11 22:19:31] 2025-10-11 20:09:49,945 | INFO     | exitmsg: OK
[2025-10-11 22:19:31] 2025-10-11 20:09:49,945 | INFO     | cpuconsumptiontime: 37107 s
[2025-10-11 22:19:31] 2025-10-11 20:09:49,945 | INFO     | nevents: 400
[2025-10-11 22:19:31] 2025-10-11 20:09:49,945 | INFO     | neventsw: 0
[2025-10-11 22:19:31] 2025-10-11 20:09:49,946 | INFO     | pid: 2083812
[2025-10-11 22:19:31] 2025-10-11 20:09:49,946 | INFO     | pgrp: 2083812
[2025-10-11 22:19:31] 2025-10-11 20:09:49,946 | INFO     | corecount: 4
[2025-10-11 22:19:31] 2025-10-11 20:09:49,946 | INFO     | event service: False
[2025-10-11 22:19:31] 2025-10-11 20:09:49,946 | INFO     | sizes: {0: 2348867, 7: 2349129, 11: 2349157, 9711: 2378152, 9712: 2387228, 9722: 2387430}
[2025-10-11 22:19:31] 2025-10-11 20:09:49,946 | INFO     | --------------------------------------------------
[2025-10-11 22:19:31] 2025-10-11 20:09:49,946 | INFO     | 
[2025-10-11 22:19:31] 2025-10-11 20:09:49,946 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2025-10-11 22:19:31] 2025-10-11 20:09:49,975 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:19:31] 2025-10-11 20:09:49,975 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:19:31] 2025-10-11 20:09:49,975 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:19:31] 2025-10-11 20:09:49,975 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:19:31] 2025-10-11 20:09:49,975 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:19:31] 2025-10-11 20:09:49,975 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:19:31] 2025-10-11 20:09:49,975 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:19:31] 2025-10-11 20:09:49,976 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:19:31] 2025-10-11 20:09:49,976 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:19:31] 2025-10-11 20:09:49,976 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:19:31] 2025-10-11 20:09:49,976 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:19:31] 2025-10-11 20:09:49,976 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:19:31] 2025-10-11 20:09:49,976 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:19:31] 2025-10-11 20:09:49,976 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:19:31] 2025-10-11 20:09:49,976 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:19:31] 2025-10-11 20:09:49,976 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:19:31] 2025-10-11 20:09:49,976 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:19:31] 2025-10-11 20:09:49,976 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:19:31] 2025-10-11 20:09:49,977 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:19:31] 2025-10-11 20:09:49,977 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:19:31] 2025-10-11 20:09:49,977 | INFO     | job 6837511358 has completed (purged errors)
[2025-10-11 22:19:31] 2025-10-11 20:09:49,977 | INFO     | overall cleanup function is called
[2025-10-11 22:19:31] 2025-10-11 20:09:50,986 | INFO     | --- collectZombieJob: --- 10, [2083812]
[2025-10-11 22:19:31] 2025-10-11 20:09:50,987 | INFO     | zombie collector waiting for pid 2083812
[2025-10-11 22:19:31] 2025-10-11 20:09:50,987 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:19:31] 2025-10-11 20:09:50,987 | INFO     | collected zombie processes
[2025-10-11 22:19:31] 2025-10-11 20:09:50,987 | INFO     | will attempt to kill all subprocesses of pid=2083812
[2025-10-11 22:19:31] 2025-10-11 20:09:51,796 | INFO     | process IDs to be killed: [2083812] (in reverse order)
[2025-10-11 22:19:31] 2025-10-11 20:09:52,071 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:19:31] 2025-10-11 20:09:52,072 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:19:31] 2025-10-11 20:09:52,106 | INFO     | did not find any defunct processes belonging to 2083812
[2025-10-11 22:19:31] 2025-10-11 20:09:52,138 | INFO     | did not find any defunct processes belonging to 2083812
[2025-10-11 22:19:31] 2025-10-11 20:09:52,139 | INFO     | ready for new job
[2025-10-11 22:19:31] 2025-10-11 20:09:52,139 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:19:31] 2025-10-11 20:09:52,142 | INFO     | ***************************************
[2025-10-11 22:19:31] 2025-10-11 20:09:52,142 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 22:19:31] 2025-10-11 20:09:52,142 | INFO     | ***************************************
[2025-10-11 22:19:31] 2025-10-11 20:09:52,142 | INFO     | 
[2025-10-11 22:19:31] 2025-10-11 20:09:52,151 | INFO     | architecture information:
[2025-10-11 22:19:31] 2025-10-11 20:09:52,152 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:19:31] 2025-10-11 20:09:52,174 | INFO     | cat /etc/os-release:
[2025-10-11 22:19:31] NAME="CentOS Linux"
[2025-10-11 22:19:31] VERSION="7 (Core)"
[2025-10-11 22:19:31] ID="centos"
[2025-10-11 22:19:31] ID_LIKE="rhel fedora"
[2025-10-11 22:19:31] VERSION_ID="7"
[2025-10-11 22:19:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:19:31] ANSI_COLOR="0;31"
[2025-10-11 22:19:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:19:31] HOME_URL="https://www.centos.org/"
[2025-10-11 22:19:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:19:31] 
[2025-10-11 22:19:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:19:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:19:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:19:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:19:31] 
[2025-10-11 22:19:31] 2025-10-11 20:09:52,174 | INFO     | ***************************************
[2025-10-11 22:19:31] 2025-10-11 20:09:52,677 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2025-10-11 22:19:31] 2025-10-11 20:09:52,700 | INFO     | sufficient remaining disk space (3338708975616 B)
[2025-10-11 22:19:31] 2025-10-11 20:09:52,700 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:19:31] 2025-10-11 20:09:52,700 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:19:31] 2025-10-11 20:09:52,701 | INFO     | update_server=False
[2025-10-11 22:19:31] 2025-10-11 20:09:52,701 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:19:31] 2025-10-11 20:09:52,877 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:19:31] 2025-10-11 20:09:52,924 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:19:31] 2025-10-11 20:09:52,924 | INFO     | aborting loop
[2025-10-11 22:19:31] 2025-10-11 20:09:53,137 | INFO     | all payload control threads have been joined
[2025-10-11 22:19:31] 2025-10-11 20:09:53,418 | INFO     | all data control threads have been joined
[2025-10-11 22:19:31] 2025-10-11 20:09:53,418 | INFO     | all job control threads have been joined
[2025-10-11 22:19:31] 2025-10-11 20:09:53,706 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:19:31] 2025-10-11 20:09:53,777 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:19:31] 2025-10-11 20:09:53,826 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:19:31] 2025-10-11 20:09:53,929 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:19:31] 2025-10-11 20:09:54,142 | INFO     | [payload] control thread has finished
[2025-10-11 22:19:31] 2025-10-11 20:09:54,175 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:19:31] 2025-10-11 20:09:54,315 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:19:31] 2025-10-11 20:09:54,362 | INFO     | [job] validate thread has finished
[2025-10-11 22:19:31] 2025-10-11 20:09:54,423 | INFO     | [data] control thread has finished
[2025-10-11 22:19:31] 2025-10-11 20:09:54,424 | INFO     | [job] control thread has finished
[2025-10-11 22:19:31] 2025-10-11 20:09:54,668 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:19:31] 2025-10-11 20:09:54,706 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:19:31] 2025-10-11 20:09:54,882 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:19:31] 2025-10-11 20:09:54,910 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:19:31] 2025-10-11 20:09:55,146 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:19:31] 2025-10-11 20:09:55,711 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:19:31] 2025-10-11 20:09:59,151 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:19:31] 2025-10-11 20:10:03,028 | INFO     | job.realtimelogging is not enabled
[2025-10-11 22:19:31] 2025-10-11 20:10:04,033 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:19:31] 2025-10-11 20:10:22,911 | INFO     | PID=2076469 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 22:19:31] 2025-10-11 20:10:22,911 | INFO     | .. there are 13 such processes running
[2025-10-11 22:19:31] 2025-10-11 20:10:22,912 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:19:31] 2025-10-11 20:10:22,912 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:19:31] 2025-10-11 20:10:22,913 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:19:31] 2025-10-11 20:10:45,236 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:19:31] 2025-10-11 20:10:47,127 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22692675385152)>', '<ExcThread(monitor, started 22692445001472)>']
[2025-10-11 22:19:31] 2025-10-11 20:10:48,032 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:19:31] 2025-10-11 20:10:48,032 | INFO     | [monitor] control thread has ended
[2025-10-11 22:19:31] 2025-10-11 20:10:52,155 | INFO     | all workflow threads have been joined
[2025-10-11 22:19:31] 2025-10-11 20:10:52,155 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:19:31] 2025-10-11 20:10:52,156 | INFO     | traces error code: 0
[2025-10-11 22:19:31] 2025-10-11 20:10:52,156 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:19:31] 2025-10-11 20:10:52,363 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:19:31] 2025-10-11 20:10:52,367 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:19:31] 2025-10-11 20:10:52,372 [wrapper] pilotpid: 2076469
[2025-10-11 22:19:31] 2025-10-11 20:10:52,375 [wrapper] Pilot exit status: 0
[2025-10-11 22:19:31] 2025-10-11 20:10:52,390 [wrapper] pandaids: 6837511358 6837511358
[2025-10-11 22:19:31] 2025-10-11 20:10:52,563 [wrapper] cleanup supervisor_pilot 2563840 2076470
[2025-10-11 22:19:31] 2025-10-11 20:10:52,567 [wrapper] Test setup, not cleaning
[2025-10-11 22:19:31] 2025-10-11 20:10:52,570 [wrapper] apfmon messages muted
[2025-10-11 22:19:31] 2025-10-11 20:10:52,574 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:19:31] 2025-10-11 20:10:52,577 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:19:31]  *** Error codes and diagnostics ***
[2025-10-11 22:19:31]     "exeErrorCode": 0,
[2025-10-11 22:19:31]     "exeErrorDiag": "",
[2025-10-11 22:19:31]     "pilotErrorCode": 0,
[2025-10-11 22:19:31]     "pilotErrorDiag": "",
[2025-10-11 22:19:31]  *** Listing of results directory ***
[2025-10-11 22:19:31] total 631904
[2025-10-11 22:19:31] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-11 22:19:31] -rw-r--r-- 1 boinc boinc    557409 Oct 10 10:04 pilot3.tar.gz
[2025-10-11 22:19:31] -rw-r--r-- 1 boinc boinc      5112 Oct 10 10:28 queuedata.json
[2025-10-11 22:19:31] -rwx------ 1 boinc boinc     36292 Oct 10 10:29 runpilot2-wrapper.sh
[2025-10-11 22:19:31] -rw-r--r-- 1 boinc boinc       100 Oct 11 17:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:19:31] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 17:03 run_atlas
[2025-10-11 22:19:31] -rw-r--r-- 1 boinc boinc       105 Oct 11 17:03 job.xml
[2025-10-11 22:19:31] -rw-r--r-- 3 boinc boinc 222113958 Oct 11 17:03 EVNT.46676267._001436.pool.root.1
[2025-10-11 22:19:31] -rw-r--r-- 3 boinc boinc 222113958 Oct 11 17:03 ATLAS.root_0
[2025-10-11 22:19:31] -rw-r--r-- 2 boinc boinc     15120 Oct 11 17:03 start_atlas.sh
[2025-10-11 22:19:31] drwxrwx--x 2 boinc boinc      4096 Oct 11 17:03 shared
[2025-10-11 22:19:31] -rw-r--r-- 2 boinc boinc    569680 Oct 11 17:03 input.tar.gz
[2025-10-11 22:19:31] -rw-r--r-- 1 boinc boinc         0 Oct 11 17:03 boinc_lockfile
[2025-10-11 22:19:31] -rw-r--r-- 1 boinc boinc      6691 Oct 11 19:27 init_data.xml
[2025-10-11 22:19:31] -rw-r--r-- 1 boinc boinc      2549 Oct 11 19:27 pandaJob.out
[2025-10-11 22:19:31] -rw------- 1 boinc boinc    975520 Oct 11 19:27 agis_schedconf.cvmfs.json
[2025-10-11 22:19:31] -rw------- 1 boinc boinc 195506047 Oct 11 22:09 HITS.46676269._035321.pool.root.1
[2025-10-11 22:19:31] -rw-r--r-- 1 boinc boinc       528 Oct 11 22:09 boinc_task_state.xml
[2025-10-11 22:19:31] -rw------- 1 boinc boinc      1026 Oct 11 22:09 memory_monitor_summary.json
[2025-10-11 22:19:31] -rw------- 1 boinc boinc   1560580 Oct 11 22:09 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:19:31] -rw------- 1 boinc boinc    343247 Oct 11 22:09 log.46676269._035321.job.log.tgz.1
[2025-10-11 22:19:31] -rw------- 1 boinc boinc      7795 Oct 11 22:09 heartbeat.json
[2025-10-11 22:19:31] -rw------- 1 boinc boinc        97 Oct 11 22:10 pilot_heartbeat.json
[2025-10-11 22:19:31] -rw------- 1 boinc boinc      4907 Oct 11 22:10 pilotlog.txt
[2025-10-11 22:19:31] -rw------- 1 boinc boinc   1367700 Oct 11 22:10 log.46676269._035321.job.log.1
[2025-10-11 22:19:31] -rw------- 1 boinc boinc       357 Oct 11 22:10 output.list
[2025-10-11 22:19:31] -rw-r--r-- 1 boinc boinc       620 Oct 11 22:10 runtime_log
[2025-10-11 22:19:31] -rw------- 1 boinc boinc   1730560 Oct 11 22:10 result.tar.gz
[2025-10-11 22:19:31] -rw-r--r-- 1 boinc boinc      9146 Oct 11 22:10 runtime_log.err
[2025-10-11 22:19:31] -rw------- 1 boinc boinc       788 Oct 11 22:10 7LxMDmWgNR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuocNDmc3KcSo.diag
[2025-10-11 22:19:31] -rw-r--r-- 1 boinc boinc        26 Oct 11 22:19 wrapper_checkpoint.txt
[2025-10-11 22:19:31] -rw-r--r-- 1 boinc boinc      8192 Oct 11 22:19 boinc_mmap_file
[2025-10-11 22:19:31] -rw-r--r-- 1 boinc boinc     22609 Oct 11 22:19 stderr.txt
[2025-10-11 22:19:32] HITS file was successfully produced:
[2025-10-11 22:19:32] -rw------- 1 boinc boinc 195506047 Oct 11 22:09 shared/HITS.pool.root.1
[2025-10-11 22:19:32]  *** Contents of shared directory: ***
[2025-10-11 22:19:32] total 410112
[2025-10-11 22:19:32] -rw-r--r-- 3 boinc boinc 222113958 Oct 11 17:03 ATLAS.root_0
[2025-10-11 22:19:32] -rw-r--r-- 2 boinc boinc     15120 Oct 11 17:03 start_atlas.sh
[2025-10-11 22:19:32] -rw-r--r-- 2 boinc boinc    569680 Oct 11 17:03 input.tar.gz
[2025-10-11 22:19:32] -rw------- 1 boinc boinc 195506047 Oct 11 22:09 HITS.pool.root.1
[2025-10-11 22:19:32] -rw------- 1 boinc boinc   1730560 Oct 11 22:10 result.tar.gz
22:19:33 (2072360): run_atlas exited; CPU time 37763.705181
22:19:33 (2072360): called boinc_finish(0)

</stderr_txt>
]]>

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