Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:29:30 (738413): wrapper (7.7.26015): starting
09:29:30 (738413): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 09:29:30] Arguments: --nthreads 4
[2025-10-11 09:29:30] Threads: 4
[2025-10-11 09:29:30] Checking for CVMFS
[2025-10-11 09:29:30] No cvmfs_config command found, will try listing directly
[2025-10-11 09:29:30] CVMFS is ok
[2025-10-11 09:29:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 09:29:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 09:29:30] Further information can be found at the LHC@home message board.
[2025-10-11 09:29:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 09:29:30] Checking for apptainer binary...
[2025-10-11 09:29:30] which: no apptainer in ((null))
[2025-10-11 09:29:30] apptainer is not installed, using version from CVMFS
[2025-10-11 09:29:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 09:29:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2025-10-11 09:29:30] apptainer works
[2025-10-11 09:29:30] Set ATHENA_PROC_NUMBER=4
[2025-10-11 09:29:30] Set ATHENA_CORE_NUMBER=4
[2025-10-11 09:29:30] Starting ATLAS job with PandaID=6837598193
[2025-10-11 09:29:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 13:34:25]  *** The last 200 lines of the pilot log: ***
[2025-10-11 13:34:25] 2025-10-11 11:00:27,101 | INFO     | maximum number of monitored processes: 6
[2025-10-11 13:34:25] 2025-10-11 11:00:27,158 | INFO     | time since job start (12648s) is within the limit (172800.0s)
[2025-10-11 13:34:25] 2025-10-11 11:00:28,899 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 13:34:25] 2025-10-11 11:00:28,906 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2494.5648499999998
[2025-10-11 13:34:25] 2025-10-11 11:00:28,914 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6837598193/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 13:34:25] 2025-10-11 11:00:28,915 | INFO     | extracted standard info from prmon json
[2025-10-11 13:34:25] 2025-10-11 11:00:28,915 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 13:34:25] 2025-10-11 11:00:28,915 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 13:34:25] 2025-10-11 11:00:28,916 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 13:34:25] 2025-10-11 11:00:28,916 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 13:34:25] 2025-10-11 11:00:28,920 | INFO     | fitting pss+swap vs Time
[2025-10-11 13:34:25] 2025-10-11 11:00:28,921 | INFO     | sum of square deviations: 2750295288.0
[2025-10-11 13:34:25] 2025-10-11 11:00:28,922 | INFO     | sum of deviations: 9781895462.0
[2025-10-11 13:34:25] 2025-10-11 11:00:28,923 | INFO     | mean x: 1760174086.0
[2025-10-11 13:34:25] 2025-10-11 11:00:28,923 | INFO     | mean y: 2342365.106280193
[2025-10-11 13:34:25] 2025-10-11 11:00:28,923 | INFO     | -- intersect: -6258017742.151191
[2025-10-11 13:34:25] 2025-10-11 11:00:28,923 | INFO     | intersect: -6258017742.151191
[2025-10-11 13:34:25] 2025-10-11 11:00:28,924 | INFO     | chi2: 1.3025063976618494
[2025-10-11 13:34:25] 2025-10-11 11:00:28,924 | INFO     | sum of square deviations: 2555770710.5
[2025-10-11 13:34:25] 2025-10-11 11:00:28,925 | INFO     | sum of deviations: 9439915645.499998
[2025-10-11 13:34:25] 2025-10-11 11:00:28,926 | INFO     | mean x: 1760173933.5
[2025-10-11 13:34:25] 2025-10-11 11:00:28,926 | INFO     | mean y: 2342096.9554455443
[2025-10-11 13:34:25] 2025-10-11 11:00:28,926 | INFO     | -- intersect: -6498981901.079285
[2025-10-11 13:34:25] 2025-10-11 11:00:28,926 | INFO     | intersect: -6498981901.079285
[2025-10-11 13:34:25] 2025-10-11 11:00:28,926 | INFO     | chi2: 1.30298900711214
[2025-10-11 13:34:25] 2025-10-11 11:00:28,927 | INFO     | current chi2=1.30298900711214 (change=-0.03705236697162409 %)
[2025-10-11 13:34:25] 2025-10-11 11:00:28,927 | INFO     | right removable region: 201
[2025-10-11 13:34:25] 2025-10-11 11:00:28,927 | INFO     | sum of square deviations: 2555770710.5
[2025-10-11 13:34:25] 2025-10-11 11:00:28,929 | INFO     | sum of deviations: -14940104750.0
[2025-10-11 13:34:25] 2025-10-11 11:00:28,929 | INFO     | mean x: 1760174238.5
[2025-10-11 13:34:25] 2025-10-11 11:00:28,929 | INFO     | mean y: 2361489.1386138615
[2025-10-11 13:34:25] 2025-10-11 11:00:28,929 | INFO     | -- intersect: 10291699023.763077
[2025-10-11 13:34:25] 2025-10-11 11:00:28,929 | INFO     | intersect: 10291699023.763077
[2025-10-11 13:34:25] 2025-10-11 11:00:28,930 | INFO     | chi2: 0.04832970229168237
[2025-10-11 13:34:25] 2025-10-11 11:00:28,930 | INFO     | current chi2=0.04832970229168237 (change=96.28948446023452 %)
[2025-10-11 13:34:25] 2025-10-11 11:00:28,930 | INFO     | sum of square deviations: 2370641658.0
[2025-10-11 13:34:25] 2025-10-11 11:00:28,932 | INFO     | sum of deviations: -14194152524.999996
[2025-10-11 13:34:25] 2025-10-11 11:00:28,932 | INFO     | mean x: 1760174391.0
[2025-10-11 13:34:25] 2025-10-11 11:00:28,932 | INFO     | mean y: 2360859.5583756347
[2025-10-11 13:34:25] 2025-10-11 11:00:28,932 | INFO     | -- intersect: 10541357207.716272
[2025-10-11 13:34:25] 2025-10-11 11:00:28,932 | INFO     | intersect: 10541357207.716272
[2025-10-11 13:34:25] 2025-10-11 11:00:28,933 | INFO     | chi2: 0.045811555227864634
[2025-10-11 13:34:25] 2025-10-11 11:00:28,933 | INFO     | current chi2=0.045811555227864634 (change=5.210350869988934 %)
[2025-10-11 13:34:25] 2025-10-11 11:00:28,933 | INFO     | left removable region: 20
[2025-10-11 13:34:25] 2025-10-11 11:00:28,933 | INFO     | sum of square deviations: 1838657730.0
[2025-10-11 13:34:25] 2025-10-11 11:00:28,934 | INFO     | sum of deviations: -9270272662.999998
[2025-10-11 13:34:25] 2025-10-11 11:00:28,935 | INFO     | mean x: 1760174513.0
[2025-10-11 13:34:25] 2025-10-11 11:00:28,935 | INFO     | mean y: 2356680.453038674
[2025-10-11 13:34:25] 2025-10-11 11:00:28,935 | INFO     | -- intersect: 8876927191.177315
[2025-10-11 13:34:25] 2025-10-11 11:00:28,935 | INFO     | intersect: 8876927191.177315
[2025-10-11 13:34:25] 2025-10-11 11:00:28,935 | INFO     | chi2: 0.04064662557949485
[2025-10-11 13:34:25] 2025-10-11 11:00:28,936 | INFO     | -- intersect: 8876927191.177315
[2025-10-11 13:34:25] 2025-10-11 11:00:28,936 | INFO     | current memory leak: -5.04 B/s (using 181 data points, chi2=0.04)
[2025-10-11 13:34:25] 2025-10-11 11:00:28,936 | INFO     | could have reported an average CPU frequency of 2542 MHz (10 samples)
[2025-10-11 13:34:25] 2025-10-11 11:00:28,936 | INFO     | ..............................
[2025-10-11 13:34:25] 2025-10-11 11:00:28,937 | INFO     | . Timing measurements:
[2025-10-11 13:34:25] 2025-10-11 11:00:28,937 | INFO     | . get job = 0 s
[2025-10-11 13:34:25] 2025-10-11 11:00:28,937 | INFO     | . initial setup = 1 s
[2025-10-11 13:34:25] 2025-10-11 11:00:28,937 | INFO     | . payload setup = 4 s
[2025-10-11 13:34:25] 2025-10-11 11:00:28,937 | INFO     | . stage-in = 0 s
[2025-10-11 13:34:25] 2025-10-11 11:00:28,937 | INFO     | . payload execution = 12617 s
[2025-10-11 13:34:25] 2025-10-11 11:00:28,937 | INFO     | . stage-out = 1 s
[2025-10-11 13:34:25] 2025-10-11 11:00:28,937 | INFO     | . log creation = 0 s
[2025-10-11 13:34:25] 2025-10-11 11:00:28,938 | INFO     | ..............................
[2025-10-11 13:34:25] 2025-10-11 11:00:29,164 | INFO     | time since job start (12650s) is within the limit (172800.0s)
[2025-10-11 13:34:25] 2025-10-11 11:00:29,179 | INFO     | 
[2025-10-11 13:34:25] 2025-10-11 11:00:29,179 | INFO     | job summary report
[2025-10-11 13:34:25] 2025-10-11 11:00:29,179 | INFO     | --------------------------------------------------
[2025-10-11 13:34:25] 2025-10-11 11:00:29,179 | INFO     | PanDA job id: 6837598193
[2025-10-11 13:34:25] 2025-10-11 11:00:29,179 | INFO     | task id: 46676269
[2025-10-11 13:34:25] 2025-10-11 11:00:29,179 | INFO     | errors: (none)
[2025-10-11 13:34:25] 2025-10-11 11:00:29,180 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 13:34:25] 2025-10-11 11:00:29,180 | INFO     | pilot state: finished 
[2025-10-11 13:34:25] 2025-10-11 11:00:29,180 | INFO     | transexitcode: 0
[2025-10-11 13:34:25] 2025-10-11 11:00:29,180 | INFO     | exeerrorcode: 0
[2025-10-11 13:34:25] 2025-10-11 11:00:29,180 | INFO     | exeerrordiag: 
[2025-10-11 13:34:25] 2025-10-11 11:00:29,180 | INFO     | exitcode: 0
[2025-10-11 13:34:25] 2025-10-11 11:00:29,180 | INFO     | exitmsg: OK
[2025-10-11 13:34:25] 2025-10-11 11:00:29,180 | INFO     | cpuconsumptiontime: 48703 s
[2025-10-11 13:34:25] 2025-10-11 11:00:29,181 | INFO     | nevents: 400
[2025-10-11 13:34:25] 2025-10-11 11:00:29,181 | INFO     | neventsw: 0
[2025-10-11 13:34:25] 2025-10-11 11:00:29,181 | INFO     | pid: 749031
[2025-10-11 13:34:25] 2025-10-11 11:00:29,181 | INFO     | pgrp: 749031
[2025-10-11 13:34:25] 2025-10-11 11:00:29,181 | INFO     | corecount: 4
[2025-10-11 13:34:25] 2025-10-11 11:00:29,181 | INFO     | event service: False
[2025-10-11 13:34:25] 2025-10-11 11:00:29,181 | INFO     | sizes: {0: 2348697, 1: 2348896, 4: 2349158, 11: 2349186, 12625: 2379189, 12626: 2388209, 12629: 2388393, 12634: 2388587}
[2025-10-11 13:34:25] 2025-10-11 11:00:29,181 | INFO     | --------------------------------------------------
[2025-10-11 13:34:25] 2025-10-11 11:00:29,182 | INFO     | 
[2025-10-11 13:34:25] 2025-10-11 11:00:29,182 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-10-11 13:34:25] 2025-10-11 11:00:29,198 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 13:34:25] 2025-10-11 11:00:29,198 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 13:34:25] 2025-10-11 11:00:29,198 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 13:34:25] 2025-10-11 11:00:29,198 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 13:34:25] 2025-10-11 11:00:29,199 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 13:34:25] 2025-10-11 11:00:29,199 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 13:34:25] 2025-10-11 11:00:29,199 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 13:34:25] 2025-10-11 11:00:29,199 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 13:34:25] 2025-10-11 11:00:29,199 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 13:34:25] 2025-10-11 11:00:29,199 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 13:34:25] 2025-10-11 11:00:29,199 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 13:34:25] 2025-10-11 11:00:29,199 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 13:34:25] 2025-10-11 11:00:29,200 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 13:34:25] 2025-10-11 11:00:29,200 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 13:34:25] 2025-10-11 11:00:29,200 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 13:34:25] 2025-10-11 11:00:29,200 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 13:34:25] 2025-10-11 11:00:29,200 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 13:34:25] 2025-10-11 11:00:29,200 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 13:34:25] 2025-10-11 11:00:29,200 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 13:34:25] 2025-10-11 11:00:29,201 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 13:34:25] 2025-10-11 11:00:29,201 | INFO     | job 6837598193 has completed (purged errors)
[2025-10-11 13:34:25] 2025-10-11 11:00:29,201 | INFO     | overall cleanup function is called
[2025-10-11 13:34:25] 2025-10-11 11:00:30,209 | INFO     | --- collectZombieJob: --- 10, [749031]
[2025-10-11 13:34:25] 2025-10-11 11:00:30,209 | INFO     | zombie collector waiting for pid 749031
[2025-10-11 13:34:25] 2025-10-11 11:00:30,209 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 13:34:25] 2025-10-11 11:00:30,209 | INFO     | collected zombie processes
[2025-10-11 13:34:25] 2025-10-11 11:00:30,209 | INFO     | will attempt to kill all subprocesses of pid=749031
[2025-10-11 13:34:25] 2025-10-11 11:00:30,539 | INFO     | process IDs to be killed: [749031] (in reverse order)
[2025-10-11 13:34:25] 2025-10-11 11:00:30,623 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 13:34:25] 2025-10-11 11:00:30,623 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 13:34:25] 2025-10-11 11:00:30,631 | INFO     | did not find any defunct processes belonging to 749031
[2025-10-11 13:34:25] 2025-10-11 11:00:30,639 | INFO     | did not find any defunct processes belonging to 749031
[2025-10-11 13:34:25] 2025-10-11 11:00:30,640 | INFO     | ready for new job
[2025-10-11 13:34:25] 2025-10-11 11:00:30,640 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 13:34:25] 2025-10-11 11:00:30,642 | INFO     | ***************************************
[2025-10-11 13:34:25] 2025-10-11 11:00:30,642 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 13:34:25] 2025-10-11 11:00:30,642 | INFO     | ***************************************
[2025-10-11 13:34:25] 2025-10-11 11:00:30,642 | INFO     | 
[2025-10-11 13:34:25] 2025-10-11 11:00:30,645 | INFO     | architecture information:
[2025-10-11 13:34:25] 2025-10-11 11:00:30,645 | INFO     | executing command: cat /etc/os-release
[2025-10-11 13:34:25] 2025-10-11 11:00:30,658 | INFO     | cat /etc/os-release:
[2025-10-11 13:34:25] NAME="CentOS Linux"
[2025-10-11 13:34:25] VERSION="7 (Core)"
[2025-10-11 13:34:25] ID="centos"
[2025-10-11 13:34:25] ID_LIKE="rhel fedora"
[2025-10-11 13:34:25] VERSION_ID="7"
[2025-10-11 13:34:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 13:34:25] ANSI_COLOR="0;31"
[2025-10-11 13:34:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 13:34:25] HOME_URL="https://www.centos.org/"
[2025-10-11 13:34:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 13:34:25] 
[2025-10-11 13:34:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 13:34:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 13:34:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 13:34:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 13:34:25] 
[2025-10-11 13:34:25] 2025-10-11 11:00:30,658 | INFO     | ***************************************
[2025-10-11 13:34:25] 2025-10-11 11:00:31,161 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-10-11 13:34:25] 2025-10-11 11:00:31,175 | INFO     | sufficient remaining disk space (1679670902784 B)
[2025-10-11 13:34:25] 2025-10-11 11:00:31,175 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 13:34:25] 2025-10-11 11:00:31,175 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 13:34:25] 2025-10-11 11:00:31,176 | INFO     | update_server=False
[2025-10-11 13:34:25] 2025-10-11 11:00:31,176 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 13:34:25] 2025-10-11 11:00:31,176 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:34:25] 2025-10-11 11:00:31,176 | INFO     | aborting loop
[2025-10-11 13:34:25] 2025-10-11 11:00:31,500 | INFO     | all data control threads have been joined
[2025-10-11 13:34:25] 2025-10-11 11:00:31,708 | INFO     | all payload control threads have been joined
[2025-10-11 13:34:25] 2025-10-11 11:00:31,925 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 13:34:25] 2025-10-11 11:00:32,181 | INFO     | [job] retrieve thread has finished
[2025-10-11 13:34:25] 2025-10-11 11:00:32,182 | INFO     | [job] job monitor thread has finished
[2025-10-11 13:34:25] 2025-10-11 11:00:32,377 | INFO     | [payload] validate_post thread has finished
[2025-10-11 13:34:25] 2025-10-11 11:00:32,506 | INFO     | [data] control thread has finished
[2025-10-11 13:34:25] 2025-10-11 11:00:32,617 | INFO     | all job control threads have been joined
[2025-10-11 13:34:25] 2025-10-11 11:00:32,714 | INFO     | [payload] control thread has finished
[2025-10-11 13:34:25] 2025-10-11 11:00:32,865 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 13:34:25] 2025-10-11 11:00:33,000 | INFO     | [data] copytool_in thread has finished
[2025-10-11 13:34:25] 2025-10-11 11:00:33,377 | INFO     | [job] validate thread has finished
[2025-10-11 13:34:25] 2025-10-11 11:00:33,407 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 13:34:25] 2025-10-11 11:00:33,455 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 13:34:25] 2025-10-11 11:00:33,542 | INFO     | [payload] failed_post thread has finished
[2025-10-11 13:34:25] 2025-10-11 11:00:33,623 | INFO     | [job] control thread has finished
[2025-10-11 13:34:25] 2025-10-11 11:00:33,651 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 13:34:25] 2025-10-11 11:00:33,930 | INFO     | [data] copytool_out thread has finished
[2025-10-11 13:34:25] 2025-10-11 11:00:34,056 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:34:25] 2025-10-11 11:00:34,261 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 13:34:25] 2025-10-11 11:00:35,062 | INFO     | [job] queue monitor thread has finished
[2025-10-11 13:34:25] 2025-10-11 11:00:38,267 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 13:34:25] 2025-10-11 11:01:00,122 | INFO     | [monitor] cgroup control has ended
[2025-10-11 13:34:25] 2025-10-11 11:01:00,610 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23299423766336)>', '<ExcThread(monitor, started 23298972808960)>']
[2025-10-11 13:34:25] 2025-10-11 11:01:02,666 | INFO     | PID=742253 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 13:34:25] 2025-10-11 11:01:02,666 | INFO     | .. there are 4 such processes running
[2025-10-11 13:34:25] 2025-10-11 11:01:02,666 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 13:34:25] 2025-10-11 11:01:02,667 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 13:34:25] 2025-10-11 11:01:02,667 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 13:34:25] 2025-10-11 11:01:02,667 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 13:34:25] 2025-10-11 11:01:02,667 | INFO     | [monitor] control thread has ended
[2025-10-11 13:34:25] 2025-10-11 11:01:05,636 | INFO     | all workflow threads have been joined
[2025-10-11 13:34:25] 2025-10-11 11:01:05,637 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 13:34:25] 2025-10-11 11:01:05,638 | INFO     | traces error code: 0
[2025-10-11 13:34:25] 2025-10-11 11:01:05,638 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 13:34:25] 2025-10-11 11:01:05,761 [wrapper] ==== pilot stdout END ====
[2025-10-11 13:34:25] 2025-10-11 11:01:05,763 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 13:34:25] 2025-10-11 11:01:05,765 [wrapper] pilotpid: 742253
[2025-10-11 13:34:25] 2025-10-11 11:01:05,767 [wrapper] Pilot exit status: 0
[2025-10-11 13:34:25] 2025-10-11 11:01:05,777 [wrapper] pandaids: 6837598193
[2025-10-11 13:34:25] 2025-10-11 11:01:05,833 [wrapper] cleanup supervisor_pilot  972175 742254
[2025-10-11 13:34:25] 2025-10-11 11:01:05,836 [wrapper] Test setup, not cleaning
[2025-10-11 13:34:25] 2025-10-11 11:01:05,838 [wrapper] apfmon messages muted
[2025-10-11 13:34:25] 2025-10-11 11:01:05,840 [wrapper] ==== wrapper stdout END ====
[2025-10-11 13:34:25] 2025-10-11 11:01:05,842 [wrapper] ==== wrapper stderr END ====
[2025-10-11 13:34:25]  *** Error codes and diagnostics ***
[2025-10-11 13:34:25]     "exeErrorCode": 0,
[2025-10-11 13:34:25]     "exeErrorDiag": "",
[2025-10-11 13:34:25]     "pilotErrorCode": 0,
[2025-10-11 13:34:25]     "pilotErrorDiag": "",
[2025-10-11 13:34:25]  *** Listing of results directory ***
[2025-10-11 13:34:25] total 411204
[2025-10-11 13:34:25] -rw-r--r-- 1 boinc boinc    557409 Oct 10 13:32 pilot3.tar.gz
[2025-10-11 13:34:25] -rw-r--r-- 1 boinc boinc      5112 Oct 10 13:37 queuedata.json
[2025-10-11 13:34:25] -rwx------ 1 boinc boinc     36292 Oct 10 13:38 runpilot2-wrapper.sh
[2025-10-11 13:34:25] -rw-r--r-- 1 boinc boinc       100 Oct 11 09:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 13:34:25] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 09:29 run_atlas
[2025-10-11 13:34:25] -rw-r--r-- 1 boinc boinc       105 Oct 11 09:29 job.xml
[2025-10-11 13:34:25] -rw-r--r-- 1 boinc boinc      6421 Oct 11 09:29 init_data.xml
[2025-10-11 13:34:25] -rw-r--r-- 2 boinc boinc 221630336 Oct 11 09:29 EVNT.46676267._001534.pool.root.1
[2025-10-11 13:34:25] -rw-r--r-- 2 boinc boinc     15120 Oct 11 09:29 start_atlas.sh
[2025-10-11 13:34:25] drwxrwx--x 2 boinc boinc      4096 Oct 11 09:29 shared
[2025-10-11 13:34:25] -rw-r--r-- 2 boinc boinc    569681 Oct 11 09:29 input.tar.gz
[2025-10-11 13:34:25] -rw-r--r-- 1 boinc boinc         0 Oct 11 09:29 boinc_lockfile
[2025-10-11 13:34:25] -rw-r--r-- 1 boinc boinc      2550 Oct 11 09:29 pandaJob.out
[2025-10-11 13:34:25] -rw------- 1 boinc boinc    975525 Oct 11 09:29 agis_schedconf.cvmfs.json
[2025-10-11 13:34:25] drwx------ 5 boinc boinc      4096 Oct 11 09:29 pilot3
[2025-10-11 13:34:25] -rw------- 1 boinc boinc 191166853 Oct 11 12:59 HITS.46676269._037779.pool.root.1
[2025-10-11 13:34:25] -rw-r--r-- 1 boinc boinc       528 Oct 11 12:59 boinc_task_state.xml
[2025-10-11 13:34:25] -rw------- 1 boinc boinc      1035 Oct 11 13:00 memory_monitor_summary.json
[2025-10-11 13:34:25] -rw------- 1 boinc boinc        95 Oct 11 13:00 pilot_heartbeat.json
[2025-10-11 13:34:25] -rw------- 1 boinc boinc   1560580 Oct 11 13:00 agis_ddmendpoints.agis.ALL.json
[2025-10-11 13:34:25] -rw------- 1 boinc boinc    388412 Oct 11 13:00 log.46676269._037779.job.log.tgz.1
[2025-10-11 13:34:25] -rw------- 1 boinc boinc      7833 Oct 11 13:00 heartbeat.json
[2025-10-11 13:34:25] -rw------- 1 boinc boinc      4833 Oct 11 13:01 pilotlog.txt
[2025-10-11 13:34:25] -rw------- 1 boinc boinc   1798544 Oct 11 13:01 log.46676269._037779.job.log.1
[2025-10-11 13:34:25] -rw------- 1 boinc boinc       357 Oct 11 13:01 output.list
[2025-10-11 13:34:25] -rw-r--r-- 1 boinc boinc       620 Oct 11 13:01 runtime_log
[2025-10-11 13:34:25] -rw------- 1 boinc boinc   2201600 Oct 11 13:01 result.tar.gz
[2025-10-11 13:34:25] -rw-r--r-- 1 boinc boinc      9070 Oct 11 13:01 runtime_log.err
[2025-10-11 13:34:25] -rw------- 1 boinc boinc       665 Oct 11 13:01 2X8MDmKdQR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmVsPMDmGZIm1m.diag
[2025-10-11 13:34:25] -rw-r--r-- 1 boinc boinc        26 Oct 11 13:34 wrapper_checkpoint.txt
[2025-10-11 13:34:25] -rw-r--r-- 1 boinc boinc      8192 Oct 11 13:34 boinc_mmap_file
[2025-10-11 13:34:25] -rw-r--r-- 1 boinc boinc     20882 Oct 11 13:34 stderr.txt
[2025-10-11 13:34:25] HITS file was successfully produced:
[2025-10-11 13:34:25] -rw------- 1 boinc boinc 191166853 Oct 11 12:59 shared/HITS.pool.root.1
[2025-10-11 13:34:25]  *** Contents of shared directory: ***
[2025-10-11 13:34:25] total 405860
[2025-10-11 13:34:25] -rw-r--r-- 2 boinc boinc 221630336 Oct 11 09:29 ATLAS.root_0
[2025-10-11 13:34:25] -rw-r--r-- 2 boinc boinc     15120 Oct 11 09:29 start_atlas.sh
[2025-10-11 13:34:25] -rw-r--r-- 2 boinc boinc    569681 Oct 11 09:29 input.tar.gz
[2025-10-11 13:34:25] -rw------- 1 boinc boinc 191166853 Oct 11 12:59 HITS.pool.root.1
[2025-10-11 13:34:25] -rw------- 1 boinc boinc   2201600 Oct 11 13:01 result.tar.gz
13:34:27 (738413): run_atlas exited; CPU time 49185.656478
13:34:27 (738413): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN