Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-10 22:21:27 (44424): vboxwrapper version 26210
2025-10-10 22:21:27 (44424): BOINC client version: 8.0.2
2025-10-10 22:21:28 (44424): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-10-10 22:21:28 (44424): Successfully copied 'init_data.xml' to the shared directory.
2025-10-10 22:21:28 (44424): Create VM. (boinc_2a248232d05fc3ba, slot#8)
2025-10-10 22:21:29 (44424): Setting Memory Size for VM. (4800MB)
2025-10-10 22:21:29 (44424): Setting CPU Count for VM. (8)
2025-10-10 22:21:30 (44424): Setting Chipset Options for VM.
2025-10-10 22:21:30 (44424): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-10 22:21:30 (44424): Setting Boot Options for VM.
2025-10-10 22:21:31 (44424): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-10 22:21:31 (44424): Enabling VM Network Access.
2025-10-10 22:21:31 (44424): Disabling USB Support for VM.
2025-10-10 22:21:31 (44424): Disabling COM Port Support for VM.
2025-10-10 22:21:32 (44424): Disabling LPT Port Support for VM.
2025-10-10 22:21:32 (44424): Disabling Audio Support for VM.
2025-10-10 22:21:32 (44424): Disabling Clipboard Support for VM.
2025-10-10 22:21:32 (44424): Disabling Drag and Drop Support for VM.
2025-10-10 22:21:33 (44424): Adding storage controller(s) to VM.
2025-10-10 22:21:33 (44424): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-10 22:21:34 (44424): Adding VirtualBox Guest Additions to VM.
2025-10-10 22:21:34 (44424): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-10 22:21:35 (44424): forwarding host port 50469 to guest port 80
2025-10-10 22:21:35 (44424): Enabling remote desktop for VM.
2025-10-10 22:21:35 (44424): Required extension pack not installed, remote desktop not enabled.
2025-10-10 22:21:35 (44424): Enabling shared directory for VM.
2025-10-10 22:21:36 (44424): Starting VM using VBoxManage interface. (boinc_2a248232d05fc3ba, slot#8)
2025-10-10 22:21:40 (44424): Successfully started VM. (PID = '39684')
2025-10-10 22:21:40 (44424): Reporting VM Process ID to BOINC.
2025-10-10 22:21:40 (44424): Guest Log: BIOS: VirtualBox 6.1.12
2025-10-10 22:21:40 (44424): Guest Log: CPUID EDX: 0x178bfbff
2025-10-10 22:21:40 (44424): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-10 22:21:40 (44424): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-10 22:21:40 (44424): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-10 22:21:40 (44424): Detected: Web Application Enabled (http://localhost:50469)
2025-10-10 22:21:40 (44424): Preference change detected
2025-10-10 22:21:40 (44424): Setting CPU throttle for VM. (100%)
2025-10-10 22:21:41 (44424): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-10 22:21:42 (44424): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-10 22:21:42 (44424): Guest Log: BIOS: Booting from Hard Disk...
2025-10-10 22:21:45 (44424): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-10 22:21:45 (44424): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-10 22:21:45 (44424): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-10 22:21:56 (44424): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-10 22:21:56 (44424): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-10 22:22:02 (44424): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-10 22:22:02 (44424): Guest Log: 00:00:00.000177 main     Log opened 2025-10-10T22:21:59.723899000Z
2025-10-10 22:22:02 (44424): Guest Log: 00:00:00.000317 main     OS Product: Linux
2025-10-10 22:22:02 (44424): Guest Log: 00:00:00.000373 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-10 22:22:02 (44424): Guest Log: 00:00:00.000420 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-10 22:22:02 (44424): Guest Log: 00:00:00.000466 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-10 22:22:02 (44424): Guest Log: 00:00:00.000467 main     Process ID: 1366
2025-10-10 22:22:02 (44424): Guest Log: 00:00:00.000468 main     Package type: LINUX_64BITS_GENERIC
2025-10-10 22:22:02 (44424): Guest Log: 00:00:00.003590 main     5.2.32 r132073 started. Verbose level = 0
2025-10-10 22:22:02 (44424): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-10 22:22:02 (44424): Guest Log: [INFO] Mounting shared directory
2025-10-10 22:22:02 (44424): Guest Log: [INFO] Checking for init_data.xml
2025-10-10 22:22:07 (44424): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-10 22:22:07 (44424): Guest Log: [INFO] Detected branch: prod
2025-10-10 22:22:07 (44424): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-10 22:22:07 (44424): Guest Log: Copying input files
2025-10-10 22:22:09 (44424): Guest Log: Copied input files into RunAtlas.
2025-10-10 22:22:09 (44424): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-10 22:22:09 (44424): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-10 22:22:09 (44424): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-10 22:22:09 (44424): Guest Log: Further information can be found at the LHC@home message board.
2025-10-10 22:22:12 (44424): Guest Log: 00:00:10.025448 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 737 244 000ns (GuestNow=1 760 152 931 468 163 000 ns GuestLast=1 760 134 919 730 919 000 ns fSetTimeLastLoop=true )
2025-10-10 22:22:37 (44424): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-10 22:22:38 (44424): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-10 22:22:38 (44424): Guest Log: 2.6.3.0 1665 0 32212 151571 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-10 22:22:39 (44424): Guest Log: copied the webapp to /var/www
2025-10-10 22:22:39 (44424): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-10 22:22:39 (44424): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-10 22:22:39 (44424): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-10 22:22:39 (44424): Guest Log:  *** Starting ATLAS job. (PandaID=6830226523 taskID=46376905) ***
2025-10-10 23:16:53 (44424): Guest Log:  *** Job finished ***
2025-10-10 23:16:53 (44424): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:38,652 | INFO     | [data] queue_monitor thread has finished
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:43,867 | INFO     | job.realtimelogging is not enabled
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:44,887 | INFO     | [payload] run_realtimelog thread has finished
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:46,500 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140161065264960)>', '<ExcThread(monitor, started 140160469554944)>']
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:47,054 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:47,055 | INFO     | [monitor] control thread has ended
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:51,507 | INFO     | all workflow threads have been joined
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:51,507 | INFO     | end of generic workflow (traces error code: 0)
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:51,507 | INFO     | traces error code: 0
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:51,507 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:51,559 [wrapper] ==== pilot stdout END ====
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:51,564 [wrapper] ==== wrapper stdout RESUME ====
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:51,568 [wrapper] pilotpid: 6092
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:51,571 [wrapper] Pilot exit status: 0
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:51,778 [wrapper] pandaids: 6830226523
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:51,812 [wrapper] cleanup supervisor_pilot 22142 6093
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:51,818 [wrapper] Test setup, not cleaning
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:51,838 [wrapper] apfmon messages muted
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:51,842 [wrapper] ==== wrapper stdout END ====
2025-10-10 23:16:53 (44424): Guest Log: 2025-10-11 04:16:51,847 [wrapper] ==== wrapper stderr END ====
2025-10-10 23:16:53 (44424): Guest Log:  *** Error codes and diagnostics ***
2025-10-10 23:16:53 (44424): Guest Log:     "exeErrorCode": 0,
2025-10-10 23:16:53 (44424): Guest Log:     "exeErrorDiag": "",
2025-10-10 23:16:53 (44424): Guest Log:     "pilotErrorCode": 0,
2025-10-10 23:16:53 (44424): Guest Log:     "pilotErrorDiag": "",
2025-10-10 23:16:53 (44424): Guest Log:  *** Listing of results directory ***
2025-10-10 23:16:53 (44424): Guest Log: total 178592
2025-10-10 23:16:53 (44424): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  4 20:24 pilot3.tar.gz
2025-10-10 23:16:53 (44424): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  4 20:25 queuedata.json
2025-10-10 23:16:53 (44424): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  4 20:27 runpilot2-wrapper.sh
2025-10-10 23:16:53 (44424): Guest Log: -rwxr-xr-x. 1 atlas atlas      8947 Oct 11 03:22 init_data.xml
2025-10-10 23:16:53 (44424): Guest Log: -rwxr-xr-x. 1 atlas atlas    565602 Oct 11 03:22 input.tar.gz
2025-10-10 23:16:53 (44424): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 11 03:22 start_atlas.sh
2025-10-10 23:16:53 (44424): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 11 03:22 EVNT.46376901._002432.pool.root.1 -> /data/./ATLAS.root_0
2025-10-10 23:16:53 (44424): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Oct 11 03:22 pandaJob.out
2025-10-10 23:16:53 (44424): Guest Log: -rw-------. 1 atlas atlas    975509 Oct 11 03:24 agis_schedconf.cvmfs.json
2025-10-10 23:16:53 (44424): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 11 03:24 agis_ddmendpoints.agis.ALL.json
2025-10-10 23:16:53 (44424): Guest Log: drwx------. 4 atlas atlas      4096 Oct 11 03:24 pilot3
2025-10-10 23:16:53 (44424): Guest Log: -rw-------. 1 atlas atlas        95 Oct 11 04:15 pilot_heartbeat.json
2025-10-10 23:16:53 (44424): Guest Log: -rw-------. 1 atlas atlas 177559192 Oct 11 04:15 HITS.46376905._067114.pool.root.1
2025-10-10 23:16:53 (44424): Guest Log: -rw-------. 1 atlas atlas      1030 Oct 11 04:16 memory_monitor_summary.json
2025-10-10 23:16:53 (44424): Guest Log: -rw-------. 1 atlas atlas    298368 Oct 11 04:16 log.46376905._067114.job.log.tgz.1
2025-10-10 23:16:53 (44424): Guest Log: -rw-------. 1 atlas atlas      7825 Oct 11 04:16 heartbeat.json
2025-10-10 23:16:53 (44424): Guest Log: -rw-------. 1 atlas atlas      4684 Oct 11 04:16 pilotlog.txt
2025-10-10 23:16:53 (44424): Guest Log: -rw-------. 1 atlas atlas    449637 Oct 11 04:16 log.46376905._067114.job.log.1
2025-10-10 23:16:53 (44424): Guest Log: -rw-------. 1 atlas atlas       357 Oct 11 04:16 output.list
2025-10-10 23:16:53 (44424): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 11 04:16 runtime_log
2025-10-10 23:16:53 (44424): Guest Log: -rw-------. 1 atlas atlas    768000 Oct 11 04:16 result.tar.gz
2025-10-10 23:16:53 (44424): Guest Log: -rw-r--r--. 1 atlas atlas      8645 Oct 11 04:16 runtime_log.err
2025-10-10 23:16:53 (44424): Guest Log: -rw-------. 1 atlas atlas       655 Oct 11 04:16 rNyNDmy1NP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmlLEMDmdDTYgm.diag
2025-10-10 23:16:53 (44424): Guest Log: Looking for outputfile HITS.46376905._067114.pool.root.1
2025-10-10 23:16:53 (44424): Guest Log: HITS file was successfully produced
2025-10-10 23:16:53 (44424): Guest Log: -rw-------. 1 atlas atlas 177559192 Oct 11 04:15 /home/atlas/RunAtlas/HITS.46376905._067114.pool.root.1
2025-10-10 23:16:53 (44424): Guest Log: Successfully finished the ATLAS job!
2025-10-10 23:16:53 (44424): Guest Log: Copying the results back to the shared directory!
2025-10-10 23:16:53 (44424): Guest Log:  *** Contents of shared directory: ***
2025-10-10 23:16:53 (44424): Guest Log: total 384620
2025-10-10 23:16:53 (44424): Guest Log: -rwxrwxrwx. 1 root root 214917125 Oct 11 03:21 ATLAS.root_0
2025-10-10 23:16:53 (44424): Guest Log: -rwxrwxrwx. 1 root root 177559192 Oct 11 04:16 HITS.pool.root.1
2025-10-10 23:16:53 (44424): Guest Log: -rwxrwxrwx. 1 root root      8947 Oct 11 03:21 init_data.xml
2025-10-10 23:16:53 (44424): Guest Log: -rwxrwxrwx. 1 root root    565602 Oct 10 16:58 input.tar.gz
2025-10-10 23:16:53 (44424): Guest Log: -rwxrwxrwx. 1 root root    768000 Oct 11 04:16 result.tar.gz
2025-10-10 23:16:53 (44424): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 10 16:58 start_atlas.sh
2025-10-10 23:16:53 (44424): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-10 23:16:53 (44424): VM Completion File Detected.
2025-10-10 23:16:53 (44424): Powering off VM.
2025-10-10 23:16:54 (44424): Successfully stopped VM.
2025-10-10 23:16:54 (44424): Deregistering VM. (boinc_2a248232d05fc3ba, slot#8)
2025-10-10 23:16:54 (44424): Removing network bandwidth throttle group from VM.
2025-10-10 23:16:55 (44424): Removing VM from VirtualBox.
2025-10-10 23:17:00 (44424): called boinc_finish(0)

</stderr_txt>
]]>

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