Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:42:07 (1601451): wrapper (7.7.26015): starting
12:42:07 (1601451): wrapper: running run_atlas (--nthreads 10)
[2025-10-10 12:42:07] Arguments: --nthreads 10
[2025-10-10 12:42:07] Threads: 10
[2025-10-10 12:42:07] Checking for CVMFS
[2025-10-10 12:42:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 12:42:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 12:42:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 12:42:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 12:42:09] 2.13.2.0 3269412 33101 367852 151555 1 853 30002060 40960001 48839 16776704 0 412858992 99.837 176120972 37048 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 12:42:09] CVMFS is ok
[2025-10-10 12:42:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 12:42:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 12:42:09] Further information can be found at the LHC@home message board.
[2025-10-10 12:42:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 12:42:09] Checking for apptainer binary...
[2025-10-10 12:42:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 12:42:09] Running /usr/bin/apptainer --version
[2025-10-10 12:42:09] apptainer version 1.4.3-1.el9
[2025-10-10 12:42:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 12:42:09] c8-16-2.aglt2.org
[2025-10-10 12:42:09] apptainer works
[2025-10-10 12:42:09] Set ATHENA_PROC_NUMBER=10
[2025-10-10 12:42:09] Set ATHENA_CORE_NUMBER=10
[2025-10-10 12:42:10] Starting ATLAS job with PandaID=6837506863
[2025-10-10 12:42:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 13:47:24]  *** The last 200 lines of the pilot log: ***
[2025-10-10 13:47:24] 2025-10-10 17:46:22,445 | INFO     | time since job start (3792s) is within the limit (172800.0s)
[2025-10-10 13:47:24] 2025-10-10 17:46:22,496 | INFO     | job 6837506863 has state=finished
[2025-10-10 13:47:24] 2025-10-10 17:46:22,496 | INFO     | preparing for final server update for job 6837506863 in state='finished'
[2025-10-10 13:47:24] 2025-10-10 17:46:22,497 | INFO     | this job has now completed (state=finished)
[2025-10-10 13:47:24] 2025-10-10 17:46:22,497 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 13:47:24] 2025-10-10 17:46:22,497 | INFO     | log transfer has been attempted: DONE
[2025-10-10 13:47:24] 2025-10-10 17:46:22,497 | INFO     | job 6837506863 has finished - writing final server update
[2025-10-10 13:47:24] 2025-10-10 17:46:22,498 | INFO     | total number of processed events: 400 (read)
[2025-10-10 13:47:24] 2025-10-10 17:46:22,498 | INFO     | executing command: lscpu
[2025-10-10 13:47:24] 2025-10-10 17:46:22,727 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 13:47:24] 2025-10-10 17:46:24,453 | INFO     | time since job start (3794s) is within the limit (172800.0s)
[2025-10-10 13:47:24] 2025-10-10 17:46:24,671 | INFO     | monitor loop #247: job 0:6837506863 is in state 'finished'
[2025-10-10 13:47:24] 2025-10-10 17:46:24,671 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 13:47:24] 2025-10-10 17:46:26,459 | INFO     | time since job start (3796s) is within the limit (172800.0s)
[2025-10-10 13:47:24] 2025-10-10 17:46:27,183 | INFO     | monitor loop #248: job 0:6837506863 is in state 'finished'
[2025-10-10 13:47:24] 2025-10-10 17:46:27,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 13:47:24] 2025-10-10 17:46:29,731 | INFO     | monitor loop #249: job 0:6837506863 is in state 'finished'
[2025-10-10 13:47:24] 2025-10-10 17:46:29,746 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 13:47:24] 2025-10-10 17:46:29,972 | INFO     | PID=1610423 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-10 13:47:24] 2025-10-10 17:46:29,972 | INFO     | .. there are 76 such processes running
[2025-10-10 13:47:24] 2025-10-10 17:46:30,973 | INFO     | time since job start (3800s) is within the limit (172800.0s)
[2025-10-10 13:47:24] 2025-10-10 17:46:32,251 | INFO     | monitor loop #250: job 0:6837506863 is in state 'finished'
[2025-10-10 13:47:24] 2025-10-10 17:46:32,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 13:47:24] 2025-10-10 17:46:32,982 | INFO     | time since job start (3802s) is within the limit (172800.0s)
[2025-10-10 13:47:24] 2025-10-10 17:46:34,758 | INFO     | monitor loop #251: job 0:6837506863 is in state 'finished'
[2025-10-10 13:47:24] 2025-10-10 17:46:34,758 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 13:47:24] 2025-10-10 17:46:34,992 | INFO     | time since job start (3804s) is within the limit (172800.0s)
[2025-10-10 13:47:24] 2025-10-10 17:46:36,999 | INFO     | time since job start (3806s) is within the limit (172800.0s)
[2025-10-10 13:47:24] 2025-10-10 17:46:37,265 | INFO     | monitor loop #252: job 0:6837506863 is in state 'finished'
[2025-10-10 13:47:24] 2025-10-10 17:46:37,265 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 13:47:24] 2025-10-10 17:46:39,006 | INFO     | time since job start (3809s) is within the limit (172800.0s)
[2025-10-10 13:47:24] 2025-10-10 17:46:39,771 | INFO     | monitor loop #253: job 0:6837506863 is in state 'finished'
[2025-10-10 13:47:24] 2025-10-10 17:46:39,771 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 13:47:24] 2025-10-10 17:46:40,998 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 13:47:24] 2025-10-10 17:46:41,007 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9899687499965
[2025-10-10 13:47:24] 2025-10-10 17:46:41,013 | INFO     | time since job start (3811s) is within the limit (172800.0s)
[2025-10-10 13:47:24] 2025-10-10 17:46:41,033 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6837506863/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 13:47:24] 2025-10-10 17:46:41,033 | INFO     | extracted standard info from prmon json
[2025-10-10 13:47:24] 2025-10-10 17:46:41,034 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 13:47:24] 2025-10-10 17:46:41,034 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 13:47:24] 2025-10-10 17:46:41,038 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 13:47:24] 2025-10-10 17:46:41,038 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 13:47:24] 2025-10-10 17:46:41,039 | INFO     | fitting pss+swap vs Time
[2025-10-10 13:47:24] 2025-10-10 17:46:41,039 | INFO     | sum of square deviations: 48810217.5
[2025-10-10 13:47:24] 2025-10-10 17:46:41,039 | INFO     | sum of deviations: 236645534.99999988
[2025-10-10 13:47:24] 2025-10-10 17:46:41,039 | INFO     | mean x: 1760116620.5
[2025-10-10 13:47:24] 2025-10-10 17:46:41,039 | INFO     | mean y: 2265682.4444444445
[2025-10-10 13:47:24] 2025-10-10 17:46:41,039 | INFO     | -- intersect: -8531270135.5554285
[2025-10-10 13:47:24] 2025-10-10 17:46:41,039 | INFO     | intersect: -8531270135.5554285
[2025-10-10 13:47:24] 2025-10-10 17:46:41,039 | INFO     | chi2: 0.05765818651326094
[2025-10-10 13:47:24] 2025-10-10 17:46:41,040 | INFO     | -- intersect: -8531270135.5554285
[2025-10-10 13:47:24] 2025-10-10 17:46:41,040 | INFO     | current memory leak: 4.85 B/s (using 54 data points, chi2=0.06)
[2025-10-10 13:47:24] 2025-10-10 17:46:41,040 | INFO     | could have reported an average CPU frequency of 3798 MHz (6 samples)
[2025-10-10 13:47:24] 2025-10-10 17:46:41,040 | INFO     | ..............................
[2025-10-10 13:47:24] 2025-10-10 17:46:41,040 | INFO     | . Timing measurements:
[2025-10-10 13:47:24] 2025-10-10 17:46:41,040 | INFO     | . get job = 0 s
[2025-10-10 13:47:24] 2025-10-10 17:46:41,040 | INFO     | . initial setup = 6 s
[2025-10-10 13:47:24] 2025-10-10 17:46:41,040 | INFO     | . payload setup = 30 s
[2025-10-10 13:47:24] 2025-10-10 17:46:41,040 | INFO     | . stage-in = 0 s
[2025-10-10 13:47:24] 2025-10-10 17:46:41,040 | INFO     | . payload execution = 3695 s
[2025-10-10 13:47:24] 2025-10-10 17:46:41,040 | INFO     | . stage-out = 1 s
[2025-10-10 13:47:24] 2025-10-10 17:46:41,040 | INFO     | . log creation = 0 s
[2025-10-10 13:47:24] 2025-10-10 17:46:41,040 | INFO     | ..............................
[2025-10-10 13:47:24] 2025-10-10 17:46:41,117 | INFO     | 
[2025-10-10 13:47:24] 2025-10-10 17:46:41,117 | INFO     | job summary report
[2025-10-10 13:47:24] 2025-10-10 17:46:41,117 | INFO     | --------------------------------------------------
[2025-10-10 13:47:24] 2025-10-10 17:46:41,117 | INFO     | PanDA job id: 6837506863
[2025-10-10 13:47:24] 2025-10-10 17:46:41,117 | INFO     | task id: 46676269
[2025-10-10 13:47:24] 2025-10-10 17:46:41,117 | INFO     | errors: (none)
[2025-10-10 13:47:24] 2025-10-10 17:46:41,117 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 13:47:24] 2025-10-10 17:46:41,117 | INFO     | pilot state: finished 
[2025-10-10 13:47:24] 2025-10-10 17:46:41,117 | INFO     | transexitcode: 0
[2025-10-10 13:47:24] 2025-10-10 17:46:41,117 | INFO     | exeerrorcode: 0
[2025-10-10 13:47:24] 2025-10-10 17:46:41,117 | INFO     | exeerrordiag: 
[2025-10-10 13:47:24] 2025-10-10 17:46:41,117 | INFO     | exitcode: 0
[2025-10-10 13:47:24] 2025-10-10 17:46:41,117 | INFO     | exitmsg: OK
[2025-10-10 13:47:24] 2025-10-10 17:46:41,117 | INFO     | cpuconsumptiontime: 22453 s
[2025-10-10 13:47:24] 2025-10-10 17:46:41,117 | INFO     | nevents: 400
[2025-10-10 13:47:24] 2025-10-10 17:46:41,117 | INFO     | neventsw: 0
[2025-10-10 13:47:24] 2025-10-10 17:46:41,118 | INFO     | pid: 1629696
[2025-10-10 13:47:24] 2025-10-10 17:46:41,118 | INFO     | pgrp: 1629696
[2025-10-10 13:47:24] 2025-10-10 17:46:41,118 | INFO     | corecount: 10
[2025-10-10 13:47:24] 2025-10-10 17:46:41,118 | INFO     | event service: False
[2025-10-10 13:47:24] 2025-10-10 17:46:41,118 | INFO     | sizes: {0: 2348029, 1: 2348885, 12: 2348885, 23: 2348913, 28: 2349203, 33: 2349231, 3729: 2375120, 3730: 2375119, 3733: 2384173, 3734: 2384229, 3754: 2384423}
[2025-10-10 13:47:24] 2025-10-10 17:46:41,118 | INFO     | --------------------------------------------------
[2025-10-10 13:47:24] 2025-10-10 17:46:41,118 | INFO     | 
[2025-10-10 13:47:24] 2025-10-10 17:46:41,118 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-10-10 13:47:24] 2025-10-10 17:46:41,213 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 13:47:24] 2025-10-10 17:46:41,213 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 13:47:24] 2025-10-10 17:46:41,213 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 13:47:24] 2025-10-10 17:46:41,213 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 13:47:24] 2025-10-10 17:46:41,213 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 13:47:24] 2025-10-10 17:46:41,213 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 13:47:24] 2025-10-10 17:46:41,214 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 13:47:24] 2025-10-10 17:46:41,214 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 13:47:24] 2025-10-10 17:46:41,214 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 13:47:24] 2025-10-10 17:46:41,218 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 13:47:24] 2025-10-10 17:46:41,218 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 13:47:24] 2025-10-10 17:46:41,218 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 13:47:24] 2025-10-10 17:46:41,218 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 13:47:24] 2025-10-10 17:46:41,218 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 13:47:24] 2025-10-10 17:46:41,218 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 13:47:24] 2025-10-10 17:46:41,218 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 13:47:24] 2025-10-10 17:46:41,218 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 13:47:24] 2025-10-10 17:46:41,218 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 13:47:24] 2025-10-10 17:46:41,218 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 13:47:24] 2025-10-10 17:46:41,218 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 13:47:24] 2025-10-10 17:46:41,218 | INFO     | job 6837506863 has completed (purged errors)
[2025-10-10 13:47:24] 2025-10-10 17:46:41,218 | INFO     | overall cleanup function is called
[2025-10-10 13:47:24] 2025-10-10 17:46:42,229 | INFO     | --- collectZombieJob: --- 10, [1629696]
[2025-10-10 13:47:24] 2025-10-10 17:46:42,229 | INFO     | zombie collector waiting for pid 1629696
[2025-10-10 13:47:24] 2025-10-10 17:46:42,229 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 13:47:24] 2025-10-10 17:46:42,229 | INFO     | collected zombie processes
[2025-10-10 13:47:24] 2025-10-10 17:46:42,229 | INFO     | will attempt to kill all subprocesses of pid=1629696
[2025-10-10 13:47:24] 2025-10-10 17:46:43,400 | INFO     | process IDs to be killed: [1629696] (in reverse order)
[2025-10-10 13:47:24] 2025-10-10 17:46:43,800 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 13:47:24] 2025-10-10 17:46:43,800 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 13:47:24] 2025-10-10 17:46:43,872 | INFO     | did not find any defunct processes belonging to 1629696
[2025-10-10 13:47:24] 2025-10-10 17:46:43,946 | INFO     | did not find any defunct processes belonging to 1629696
[2025-10-10 13:47:24] 2025-10-10 17:46:43,946 | INFO     | ready for new job
[2025-10-10 13:47:24] 2025-10-10 17:46:43,946 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 13:47:24] 2025-10-10 17:46:43,947 | INFO     | ***************************************
[2025-10-10 13:47:24] 2025-10-10 17:46:43,947 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 13:47:24] 2025-10-10 17:46:43,947 | INFO     | ***************************************
[2025-10-10 13:47:24] 2025-10-10 17:46:43,947 | INFO     | 
[2025-10-10 13:47:24] 2025-10-10 17:46:43,956 | INFO     | architecture information:
[2025-10-10 13:47:24] 2025-10-10 17:46:43,956 | INFO     | executing command: cat /etc/os-release
[2025-10-10 13:47:24] 2025-10-10 17:46:44,107 | INFO     | cat /etc/os-release:
[2025-10-10 13:47:24] NAME="CentOS Linux"
[2025-10-10 13:47:24] VERSION="7 (Core)"
[2025-10-10 13:47:24] ID="centos"
[2025-10-10 13:47:24] ID_LIKE="rhel fedora"
[2025-10-10 13:47:24] VERSION_ID="7"
[2025-10-10 13:47:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 13:47:24] ANSI_COLOR="0;31"
[2025-10-10 13:47:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 13:47:24] HOME_URL="https://www.centos.org/"
[2025-10-10 13:47:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 13:47:24] 
[2025-10-10 13:47:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 13:47:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 13:47:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 13:47:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 13:47:24] 
[2025-10-10 13:47:24] 2025-10-10 17:46:44,107 | INFO     | ***************************************
[2025-10-10 13:47:24] 2025-10-10 17:46:44,610 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-10-10 13:47:24] 2025-10-10 17:46:44,638 | INFO     | sufficient remaining disk space (168118190080 B)
[2025-10-10 13:47:24] 2025-10-10 17:46:44,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 13:47:24] 2025-10-10 17:46:44,638 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 13:47:24] 2025-10-10 17:46:44,638 | INFO     | update_server=False
[2025-10-10 13:47:24] 2025-10-10 17:46:44,638 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 13:47:24] 2025-10-10 17:46:44,641 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 13:47:24] 2025-10-10 17:46:44,786 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 13:47:24] 2025-10-10 17:46:44,786 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 13:47:24] 2025-10-10 17:46:44,786 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 13:47:24] 2025-10-10 17:46:44,786 | INFO     | will abort loop
[2025-10-10 13:47:24] 2025-10-10 17:46:45,283 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 13:47:24] 2025-10-10 17:46:45,298 | INFO     | all job control threads have been joined
[2025-10-10 13:47:24] 2025-10-10 17:46:45,646 | INFO     | [job] retrieve thread has finished
[2025-10-10 13:47:24] 2025-10-10 17:46:45,678 | INFO     | all data control threads have been joined
[2025-10-10 13:47:24] 2025-10-10 17:46:45,790 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 13:47:24] 2025-10-10 17:46:45,790 | INFO     | [data] copytool_in thread has finished
[2025-10-10 13:47:24] 2025-10-10 17:46:45,794 | INFO     | [job] job monitor thread has finished
[2025-10-10 13:47:24] 2025-10-10 17:46:45,815 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 13:47:24] 2025-10-10 17:46:45,815 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 13:47:24] 2025-10-10 17:46:45,898 | INFO     | all payload control threads have been joined
[2025-10-10 13:47:24] 2025-10-10 17:46:46,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 13:47:24] 2025-10-10 17:46:46,306 | INFO     | [job] control thread has finished
[2025-10-10 13:47:24] 2025-10-10 17:46:46,684 | INFO     | [data] control thread has finished
[2025-10-10 13:47:24] 2025-10-10 17:46:46,729 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 13:47:24] 2025-10-10 17:46:46,795 | INFO     | [job] validate thread has finished
[2025-10-10 13:47:24] 2025-10-10 17:46:46,904 | INFO     | [payload] control thread has finished
[2025-10-10 13:47:24] 2025-10-10 17:46:47,014 | INFO     | [payload] failed_post thread has finished
[2025-10-10 13:47:24] 2025-10-10 17:46:47,059 | INFO     | [payload] validate_post thread has finished
[2025-10-10 13:47:24] 2025-10-10 17:46:47,162 | INFO     | [job] queue monitor thread has finished
[2025-10-10 13:47:24] 2025-10-10 17:46:47,290 | INFO     | [data] copytool_out thread has finished
[2025-10-10 13:47:24] 2025-10-10 17:46:48,658 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 13:47:24] 2025-10-10 17:47:15,850 | INFO     | PID=1610423 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 13:47:24] 2025-10-10 17:47:15,858 | INFO     | .. there are 76 such processes running
[2025-10-10 13:47:24] 2025-10-10 17:47:15,858 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 13:47:24] 2025-10-10 17:47:15,858 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 13:47:24] 2025-10-10 17:47:15,858 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 13:47:24] 2025-10-10 17:47:16,324 | INFO     | [monitor] cgroup control has ended
[2025-10-10 13:47:24] 2025-10-10 17:47:18,074 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140550526756672)>', '<ExcThread(monitor, started 140550036510464)>']
[2025-10-10 13:47:24] 2025-10-10 17:47:18,876 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 13:47:24] 2025-10-10 17:47:18,876 | INFO     | [monitor] control thread has ended
[2025-10-10 13:47:24] 2025-10-10 17:47:23,105 | INFO     | all workflow threads have been joined
[2025-10-10 13:47:24] 2025-10-10 17:47:23,105 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 13:47:24] 2025-10-10 17:47:23,105 | INFO     | traces error code: 0
[2025-10-10 13:47:24] 2025-10-10 17:47:23,106 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 13:47:24] 2025-10-10 17:47:23,250 [wrapper] ==== pilot stdout END ====
[2025-10-10 13:47:24] 2025-10-10 17:47:23,274 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 13:47:24] 2025-10-10 17:47:23,313 [wrapper] pilotpid: 1610423
[2025-10-10 13:47:24] 2025-10-10 17:47:23,323 [wrapper] Pilot exit status: 0
[2025-10-10 13:47:24] 2025-10-10 17:47:23,395 [wrapper] pandaids: 6837506863
[2025-10-10 13:47:24] 2025-10-10 17:47:23,692 [wrapper] cleanup supervisor_pilot 2269311 1610424
[2025-10-10 13:47:24] 2025-10-10 17:47:23,695 [wrapper] Test setup, not cleaning
[2025-10-10 13:47:24] 2025-10-10 17:47:23,702 [wrapper] apfmon messages muted
[2025-10-10 13:47:24] 2025-10-10 17:47:23,704 [wrapper] ==== wrapper stdout END ====
[2025-10-10 13:47:24] 2025-10-10 17:47:23,706 [wrapper] ==== wrapper stderr END ====
[2025-10-10 13:47:24]  *** Error codes and diagnostics ***
[2025-10-10 13:47:24]     "exeErrorCode": 0,
[2025-10-10 13:47:24]     "exeErrorDiag": "",
[2025-10-10 13:47:24]     "pilotErrorCode": 0,
[2025-10-10 13:47:24]     "pilotErrorDiag": "",
[2025-10-10 13:47:24]  *** Listing of results directory ***
[2025-10-10 13:47:24] total 415452
[2025-10-10 13:47:24] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 02:47 queuedata.json
[2025-10-10 13:47:24] -rwx------. 1 boincer umatlas     36292 Oct 10 02:48 runpilot2-wrapper.sh
[2025-10-10 13:47:24] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 02:48 pilot3.tar.gz
[2025-10-10 13:47:24] -rw-r--r--. 1 boincer umatlas       100 Oct 10 12:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 13:47:24] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 12:42 run_atlas
[2025-10-10 13:47:24] -rw-r--r--. 1 boincer umatlas       105 Oct 10 12:42 job.xml
[2025-10-10 13:47:24] -rw-r--r--. 2 boincer umatlas 224107857 Oct 10 12:42 EVNT.46676267._001383.pool.root.1
[2025-10-10 13:47:24] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 12:42 start_atlas.sh
[2025-10-10 13:47:24] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 12:42 shared
[2025-10-10 13:47:24] -rw-r--r--. 2 boincer umatlas    569679 Oct 10 12:42 input.tar.gz
[2025-10-10 13:47:24] -rw-r--r--. 1 boincer umatlas         0 Oct 10 12:42 boinc_lockfile
[2025-10-10 13:47:24] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 12:42 pandaJob.out
[2025-10-10 13:47:24] -rw-------. 1 boincer umatlas    975525 Oct 10 12:43 agis_schedconf.cvmfs.json
[2025-10-10 13:47:24] -rw-------. 1 boincer umatlas   1560580 Oct 10 12:43 agis_ddmendpoints.agis.ALL.json
[2025-10-10 13:47:24] drwx------. 5 boincer umatlas      4096 Oct 10 12:43 pilot3
[2025-10-10 13:47:24] -rw-r--r--. 1 boincer umatlas      7162 Oct 10 13:36 init_data.xml
[2025-10-10 13:47:24] -rw-------. 1 boincer umatlas 195712082 Oct 10 13:45 HITS.46676269._033982.pool.root.1
[2025-10-10 13:47:24] -rw-r--r--. 1 boincer umatlas       529 Oct 10 13:45 boinc_task_state.xml
[2025-10-10 13:47:24] -rw-------. 1 boincer umatlas      1034 Oct 10 13:46 memory_monitor_summary.json
[2025-10-10 13:47:24] -rw-------. 1 boincer umatlas    331753 Oct 10 13:46 log.46676269._033982.job.log.tgz.1
[2025-10-10 13:47:24] -rw-------. 1 boincer umatlas        95 Oct 10 13:46 pilot_heartbeat.json
[2025-10-10 13:47:24] -rw-------. 1 boincer umatlas      7777 Oct 10 13:46 heartbeat.json
[2025-10-10 13:47:24] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 13:47 boinc_mmap_file
[2025-10-10 13:47:24] -rw-r--r--. 1 boincer umatlas        27 Oct 10 13:47 wrapper_checkpoint.txt
[2025-10-10 13:47:24] -rw-------. 1 boincer umatlas      5011 Oct 10 13:47 pilotlog.txt
[2025-10-10 13:47:24] -rw-------. 1 boincer umatlas    519333 Oct 10 13:47 log.46676269._033982.job.log.1
[2025-10-10 13:47:24] -rw-------. 1 boincer umatlas       357 Oct 10 13:47 output.list
[2025-10-10 13:47:24] -rw-r--r--. 1 boincer umatlas       620 Oct 10 13:47 runtime_log
[2025-10-10 13:47:24] -rw-------. 1 boincer umatlas    870400 Oct 10 13:47 result.tar.gz
[2025-10-10 13:47:24] -rw-------. 1 boincer umatlas       651 Oct 10 13:47 v5FKDmK6LR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmkSPMDmXBQ24m.diag
[2025-10-10 13:47:24] -rw-r--r--. 1 boincer umatlas      8700 Oct 10 13:47 runtime_log.err
[2025-10-10 13:47:24] -rw-r--r--. 1 boincer umatlas     22308 Oct 10 13:47 stderr.txt
[2025-10-10 13:47:24] HITS file was successfully produced:
[2025-10-10 13:47:24] -rw-------. 1 boincer umatlas 195712082 Oct 10 13:45 shared/HITS.pool.root.1
[2025-10-10 13:47:24]  *** Contents of shared directory: ***
[2025-10-10 13:47:24] total 411416
[2025-10-10 13:47:24] -rw-r--r--. 2 boincer umatlas 224107857 Oct 10 12:42 ATLAS.root_0
[2025-10-10 13:47:24] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 12:42 start_atlas.sh
[2025-10-10 13:47:24] -rw-r--r--. 2 boincer umatlas    569679 Oct 10 12:42 input.tar.gz
[2025-10-10 13:47:24] -rw-------. 1 boincer umatlas 195712082 Oct 10 13:45 HITS.pool.root.1
[2025-10-10 13:47:24] -rw-------. 1 boincer umatlas    870400 Oct 10 13:47 result.tar.gz
13:47:25 (1601451): run_atlas exited; CPU time 22603.591899
13:47:25 (1601451): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN