Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
22:43:41 (1548942): wrapper (7.7.26015): starting
22:43:41 (1548942): wrapper: running run_atlas (--nthreads 2)
[2025-10-10 22:43:41] Arguments: --nthreads 2
[2025-10-10 22:43:41] Threads: 2
[2025-10-10 22:43:41] Checking for CVMFS
[2025-10-10 22:43:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 22:43:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 22:43:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 22:43:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 22:43:41] 2.11.0.0 1278923 2036 54224 151560 2 56 5697225 6144000 0 130560 0 4458251 99.997 67373 506 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-10 22:43:41] CVMFS is ok
[2025-10-10 22:43:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 22:43:41] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-10 22:43:41] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-10 22:43:41] Further information can be found at the LHC@home message board.
[2025-10-10 22:43:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 22:43:41] Checking for apptainer binary...
[2025-10-10 22:43:41] apptainer is not installed, using version from CVMFS
[2025-10-10 22:43:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 22:43:41] mordor
[2025-10-10 22:43:41] apptainer works
[2025-10-10 22:43:41] Set ATHENA_PROC_NUMBER=2
[2025-10-10 22:43:41] Set ATHENA_CORE_NUMBER=2
[2025-10-10 22:43:41] Starting ATLAS job with PandaID=6837355827
[2025-10-10 22:43:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 04:37:53]  *** The last 200 lines of the pilot log: ***
[2025-10-11 04:37:53] 2025-10-11 02:37:20,768 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 04:37:53] 2025-10-11 02:37:20,769 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 04:37:53] 2025-10-11 02:37:20,769 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 04:37:53] 2025-10-11 02:37:20,773 | INFO     | fitting pss+swap vs Time
[2025-10-11 04:37:53] 2025-10-11 02:37:20,774 | INFO     | sum of square deviations: 13068103627.0
[2025-10-11 04:37:53] 2025-10-11 02:37:20,776 | INFO     | sum of deviations: -84885267024.49998
[2025-10-11 04:37:53] 2025-10-11 02:37:20,776 | INFO     | mean x: 1760139634.5
[2025-10-11 04:37:53] 2025-10-11 02:37:20,776 | INFO     | mean y: 2283975.6120689656
[2025-10-11 04:37:53] 2025-10-11 02:37:20,777 | INFO     | -- intersect: 11435459525.75406
[2025-10-11 04:37:53] 2025-10-11 02:37:20,777 | INFO     | intersect: 11435459525.75406
[2025-10-11 04:37:53] 2025-10-11 02:37:20,777 | INFO     | chi2: 2.284006681662284
[2025-10-11 04:37:53] 2025-10-11 02:37:20,778 | INFO     | sum of square deviations: 12512874612.0
[2025-10-11 04:37:53] 2025-10-11 02:37:20,780 | INFO     | sum of deviations: -64825694543.99999
[2025-10-11 04:37:53] 2025-10-11 02:37:20,780 | INFO     | mean x: 1760139482.0
[2025-10-11 04:37:53] 2025-10-11 02:37:20,781 | INFO     | mean y: 2289423.5306122447
[2025-10-11 04:37:53] 2025-10-11 02:37:20,781 | INFO     | -- intersect: 9121078507.019144
[2025-10-11 04:37:53] 2025-10-11 02:37:20,781 | INFO     | intersect: 9121078507.019144
[2025-10-11 04:37:53] 2025-10-11 02:37:20,781 | INFO     | chi2: 1.6353819036788444
[2025-10-11 04:37:53] 2025-10-11 02:37:20,781 | INFO     | current chi2=1.6353819036788444 (change=28.39854993381084 %)
[2025-10-11 04:37:53] 2025-10-11 02:37:20,782 | INFO     | sum of square deviations: 11973599384.5
[2025-10-11 04:37:53] 2025-10-11 02:37:20,785 | INFO     | sum of deviations: -64371822793.49999
[2025-10-11 04:37:53] 2025-10-11 02:37:20,785 | INFO     | mean x: 1760139329.5
[2025-10-11 04:37:53] 2025-10-11 02:37:20,785 | INFO     | mean y: 2289551.8609467456
[2025-10-11 04:37:53] 2025-10-11 02:37:20,785 | INFO     | -- intersect: 9465056208.069336
[2025-10-11 04:37:53] 2025-10-11 02:37:20,785 | INFO     | intersect: 9465056208.069336
[2025-10-11 04:37:53] 2025-10-11 02:37:20,786 | INFO     | chi2: 1.6317017257358366
[2025-10-11 04:37:53] 2025-10-11 02:37:20,786 | INFO     | current chi2=1.6317017257358366 (change=0.2250347722895252 %)
[2025-10-11 04:37:53] 2025-10-11 02:37:20,786 | INFO     | right removable region: 337
[2025-10-11 04:37:53] 2025-10-11 02:37:20,786 | INFO     | sum of square deviations: 12512874612.0
[2025-10-11 04:37:53] 2025-10-11 02:37:20,789 | INFO     | sum of deviations: -107249270299.0
[2025-10-11 04:37:53] 2025-10-11 02:37:20,790 | INFO     | mean x: 1760139787.0
[2025-10-11 04:37:53] 2025-10-11 02:37:20,790 | INFO     | mean y: 2290020.0349854226
[2025-10-11 04:37:53] 2025-10-11 02:37:20,790 | INFO     | -- intersect: 15088648161.828478
[2025-10-11 04:37:53] 2025-10-11 02:37:20,790 | INFO     | intersect: 15088648161.828478
[2025-10-11 04:37:53] 2025-10-11 02:37:20,790 | INFO     | chi2: 1.2202428250818227
[2025-10-11 04:37:53] 2025-10-11 02:37:20,791 | INFO     | current chi2=1.2202428250818227 (change=46.5744634252235 %)
[2025-10-11 04:37:53] 2025-10-11 02:37:20,791 | INFO     | sum of square deviations: 11973599384.5
[2025-10-11 04:37:53] 2025-10-11 02:37:20,793 | INFO     | sum of deviations: -88632228319.5
[2025-10-11 04:37:53] 2025-10-11 02:37:20,793 | INFO     | mean x: 1760139939.5
[2025-10-11 04:37:53] 2025-10-11 02:37:20,793 | INFO     | mean y: 2284754.6834319527
[2025-10-11 04:37:53] 2025-10-11 02:37:20,793 | INFO     | -- intersect: 13031376507.49302
[2025-10-11 04:37:53] 2025-10-11 02:37:20,794 | INFO     | intersect: 13031376507.49302
[2025-10-11 04:37:53] 2025-10-11 02:37:20,794 | INFO     | chi2: 1.1524651325129276
[2025-10-11 04:37:53] 2025-10-11 02:37:20,794 | INFO     | current chi2=1.1524651325129276 (change=5.554443031808058 %)
[2025-10-11 04:37:53] 2025-10-11 02:37:20,794 | INFO     | left removable region: 20
[2025-10-11 04:37:53] 2025-10-11 02:37:20,795 | INFO     | sum of square deviations: 9877610318.0
[2025-10-11 04:37:53] 2025-10-11 02:37:20,796 | INFO     | sum of deviations: -31086242512.999996
[2025-10-11 04:37:53] 2025-10-11 02:37:20,797 | INFO     | mean x: 1760139909.0
[2025-10-11 04:37:53] 2025-10-11 02:37:20,797 | INFO     | mean y: 2278710.05362776
[2025-10-11 04:37:53] 2025-10-11 02:37:20,797 | INFO     | -- intersect: 5541688983.02971
[2025-10-11 04:37:53] 2025-10-11 02:37:20,797 | INFO     | intersect: 5541688983.02971
[2025-10-11 04:37:53] 2025-10-11 02:37:20,797 | INFO     | chi2: 0.2959473613489646
[2025-10-11 04:37:53] 2025-10-11 02:37:20,797 | INFO     | -- intersect: 5541688983.02971
[2025-10-11 04:37:53] 2025-10-11 02:37:20,797 | INFO     | current memory leak: -3.15 B/s (using 317 data points, chi2=0.30)
[2025-10-11 04:37:53] 2025-10-11 02:37:20,798 | INFO     | could have reported an average CPU frequency of 2960 MHz (15 samples)
[2025-10-11 04:37:53] 2025-10-11 02:37:20,798 | INFO     | ..............................
[2025-10-11 04:37:53] 2025-10-11 02:37:20,798 | INFO     | . Timing measurements:
[2025-10-11 04:37:53] 2025-10-11 02:37:20,798 | INFO     | . get job = 0 s
[2025-10-11 04:37:53] 2025-10-11 02:37:20,799 | INFO     | . initial setup = 2 s
[2025-10-11 04:37:53] 2025-10-11 02:37:20,799 | INFO     | . payload setup = 3 s
[2025-10-11 04:37:53] 2025-10-11 02:37:20,799 | INFO     | . stage-in = 0 s
[2025-10-11 04:37:53] 2025-10-11 02:37:20,799 | INFO     | . payload execution = 21182 s
[2025-10-11 04:37:53] 2025-10-11 02:37:20,799 | INFO     | . stage-out = 1 s
[2025-10-11 04:37:53] 2025-10-11 02:37:20,799 | INFO     | . log creation = 0 s
[2025-10-11 04:37:53] 2025-10-11 02:37:20,800 | INFO     | ..............................
[2025-10-11 04:37:53] 2025-10-11 02:37:20,916 | INFO     | PID=1552578 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 04:37:53] 2025-10-11 02:37:21,159 | INFO     | 
[2025-10-11 04:37:53] 2025-10-11 02:37:21,159 | INFO     | job summary report
[2025-10-11 04:37:53] 2025-10-11 02:37:21,159 | INFO     | --------------------------------------------------
[2025-10-11 04:37:53] 2025-10-11 02:37:21,159 | INFO     | PanDA job id: 6837355827
[2025-10-11 04:37:53] 2025-10-11 02:37:21,159 | INFO     | task id: 46676269
[2025-10-11 04:37:53] 2025-10-11 02:37:21,159 | INFO     | errors: (none)
[2025-10-11 04:37:53] 2025-10-11 02:37:21,159 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 04:37:53] 2025-10-11 02:37:21,160 | INFO     | pilot state: finished 
[2025-10-11 04:37:53] 2025-10-11 02:37:21,160 | INFO     | transexitcode: 0
[2025-10-11 04:37:53] 2025-10-11 02:37:21,160 | INFO     | exeerrorcode: 0
[2025-10-11 04:37:53] 2025-10-11 02:37:21,160 | INFO     | exeerrordiag: 
[2025-10-11 04:37:53] 2025-10-11 02:37:21,160 | INFO     | exitcode: 0
[2025-10-11 04:37:53] 2025-10-11 02:37:21,160 | INFO     | exitmsg: OK
[2025-10-11 04:37:53] 2025-10-11 02:37:21,160 | INFO     | cpuconsumptiontime: 41218 s
[2025-10-11 04:37:53] 2025-10-11 02:37:21,161 | INFO     | nevents: 400
[2025-10-11 04:37:53] 2025-10-11 02:37:21,161 | INFO     | neventsw: 0
[2025-10-11 04:37:53] 2025-10-11 02:37:21,161 | INFO     | pid: 1558915
[2025-10-11 04:37:53] 2025-10-11 02:37:21,161 | INFO     | pgrp: 1558915
[2025-10-11 04:37:53] 2025-10-11 02:37:21,161 | INFO     | corecount: 2
[2025-10-11 04:37:53] 2025-10-11 02:37:21,161 | INFO     | event service: False
[2025-10-11 04:37:53] 2025-10-11 02:37:21,161 | INFO     | sizes: {0: 2348862, 3: 2349124, 11: 2349152, 21189: 2383000, 21190: 2382999, 21191: 2392251, 21198: 2392389}
[2025-10-11 04:37:53] 2025-10-11 02:37:21,162 | INFO     | --------------------------------------------------
[2025-10-11 04:37:53] 2025-10-11 02:37:21,162 | INFO     | 
[2025-10-11 04:37:53] 2025-10-11 02:37:21,162 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-11 04:37:53] 2025-10-11 02:37:21,177 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 04:37:53] 2025-10-11 02:37:21,177 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 04:37:53] 2025-10-11 02:37:21,177 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 04:37:53] 2025-10-11 02:37:21,177 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 04:37:53] 2025-10-11 02:37:21,177 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 04:37:53] 2025-10-11 02:37:21,177 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 04:37:53] 2025-10-11 02:37:21,178 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 04:37:53] 2025-10-11 02:37:21,178 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 04:37:53] 2025-10-11 02:37:21,178 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 04:37:53] 2025-10-11 02:37:21,178 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 04:37:53] 2025-10-11 02:37:21,178 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 04:37:53] 2025-10-11 02:37:21,178 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 04:37:53] 2025-10-11 02:37:21,178 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 04:37:53] 2025-10-11 02:37:21,178 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 04:37:53] 2025-10-11 02:37:21,178 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 04:37:53] 2025-10-11 02:37:21,178 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 04:37:53] 2025-10-11 02:37:21,178 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 04:37:53] 2025-10-11 02:37:21,178 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 04:37:53] 2025-10-11 02:37:21,179 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 04:37:53] 2025-10-11 02:37:21,179 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 04:37:53] 2025-10-11 02:37:21,179 | INFO     | job 6837355827 has completed (purged errors)
[2025-10-11 04:37:53] 2025-10-11 02:37:21,179 | INFO     | overall cleanup function is called
[2025-10-11 04:37:53] 2025-10-11 02:37:22,183 | INFO     | --- collectZombieJob: --- 10, [1558915]
[2025-10-11 04:37:53] 2025-10-11 02:37:22,183 | INFO     | zombie collector waiting for pid 1558915
[2025-10-11 04:37:53] 2025-10-11 02:37:22,183 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 04:37:53] 2025-10-11 02:37:22,183 | INFO     | collected zombie processes
[2025-10-11 04:37:53] 2025-10-11 02:37:22,183 | INFO     | will attempt to kill all subprocesses of pid=1558915
[2025-10-11 04:37:53] 2025-10-11 02:37:22,244 | INFO     | process IDs to be killed: [1558915] (in reverse order)
[2025-10-11 04:37:53] 2025-10-11 02:37:22,272 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 04:37:53] 2025-10-11 02:37:22,272 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 04:37:53] 2025-10-11 02:37:22,273 | INFO     | did not find any defunct processes belonging to 1558915
[2025-10-11 04:37:53] 2025-10-11 02:37:22,274 | INFO     | did not find any defunct processes belonging to 1558915
[2025-10-11 04:37:53] 2025-10-11 02:37:22,274 | INFO     | ready for new job
[2025-10-11 04:37:53] 2025-10-11 02:37:22,274 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 04:37:53] 2025-10-11 02:37:22,276 | INFO     | ***************************************
[2025-10-11 04:37:53] 2025-10-11 02:37:22,276 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 04:37:53] 2025-10-11 02:37:22,276 | INFO     | ***************************************
[2025-10-11 04:37:53] 2025-10-11 02:37:22,276 | INFO     | 
[2025-10-11 04:37:53] 2025-10-11 02:37:22,295 | INFO     | architecture information:
[2025-10-11 04:37:53] 2025-10-11 02:37:22,295 | INFO     | executing command: cat /etc/os-release
[2025-10-11 04:37:53] 2025-10-11 02:37:22,307 | INFO     | cat /etc/os-release:
[2025-10-11 04:37:53] NAME="CentOS Linux"
[2025-10-11 04:37:53] VERSION="7 (Core)"
[2025-10-11 04:37:53] ID="centos"
[2025-10-11 04:37:53] ID_LIKE="rhel fedora"
[2025-10-11 04:37:53] VERSION_ID="7"
[2025-10-11 04:37:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 04:37:53] ANSI_COLOR="0;31"
[2025-10-11 04:37:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 04:37:53] HOME_URL="https://www.centos.org/"
[2025-10-11 04:37:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 04:37:53] 
[2025-10-11 04:37:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 04:37:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 04:37:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 04:37:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 04:37:53] 
[2025-10-11 04:37:53] 2025-10-11 02:37:22,308 | INFO     | ***************************************
[2025-10-11 04:37:53] 2025-10-11 02:37:22,811 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-11 04:37:53] 2025-10-11 02:37:22,823 | INFO     | sufficient remaining disk space (417575469056 B)
[2025-10-11 04:37:53] 2025-10-11 02:37:22,823 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 04:37:53] 2025-10-11 02:37:22,823 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 04:37:53] 2025-10-11 02:37:22,824 | INFO     | update_server=False
[2025-10-11 04:37:53] 2025-10-11 02:37:22,824 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 04:37:53] 2025-10-11 02:37:22,824 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 04:37:53] 2025-10-11 02:37:22,824 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 04:37:53] 2025-10-11 02:37:22,940 | INFO     | all job control threads have been joined
[2025-10-11 04:37:53] 2025-10-11 02:37:23,183 | INFO     | all payload control threads have been joined
[2025-10-11 04:37:53] 2025-10-11 02:37:23,471 | INFO     | all data control threads have been joined
[2025-10-11 04:37:53] 2025-10-11 02:37:23,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 04:37:53] 2025-10-11 02:37:23,491 | INFO     | aborting loop
[2025-10-11 04:37:53] 2025-10-11 02:37:23,825 | INFO     | [job] retrieve thread has finished
[2025-10-11 04:37:53] 2025-10-11 02:37:23,828 | INFO     | [job] queue monitor thread has finished
[2025-10-11 04:37:53] 2025-10-11 02:37:23,941 | INFO     | [job] control thread has finished
[2025-10-11 04:37:53] 2025-10-11 02:37:24,129 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 04:37:53] 2025-10-11 02:37:24,187 | INFO     | [payload] control thread has finished
[2025-10-11 04:37:53] 2025-10-11 02:37:24,299 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 04:37:53] 2025-10-11 02:37:24,299 | INFO     | [job] validate thread has finished
[2025-10-11 04:37:53] 2025-10-11 02:37:24,476 | INFO     | [data] control thread has finished
[2025-10-11 04:37:53] 2025-10-11 02:37:24,495 | INFO     | [job] job monitor thread has finished
[2025-10-11 04:37:53] 2025-10-11 02:37:24,535 | INFO     | [payload] failed_post thread has finished
[2025-10-11 04:37:53] 2025-10-11 02:37:24,688 | INFO     | [data] copytool_in thread has finished
[2025-10-11 04:37:53] 2025-10-11 02:37:24,744 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 04:37:53] 2025-10-11 02:37:24,830 | INFO     | [data] copytool_out thread has finished
[2025-10-11 04:37:53] 2025-10-11 02:37:24,951 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 04:37:53] 2025-10-11 02:37:25,028 | INFO     | [payload] validate_post thread has finished
[2025-10-11 04:37:53] 2025-10-11 02:37:25,072 | INFO     | [monitor] cgroup control has ended
[2025-10-11 04:37:53] 2025-10-11 02:37:25,140 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 04:37:53] 2025-10-11 02:37:28,750 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 04:37:53] 2025-10-11 02:37:29,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140712931747648)>', '<ExcThread(monitor, started 140712481892096)>']
[2025-10-11 04:37:53] 2025-10-11 02:37:34,618 | INFO     | all workflow threads have been joined
[2025-10-11 04:37:53] 2025-10-11 02:37:34,619 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 04:37:53] 2025-10-11 02:37:34,619 | INFO     | traces error code: 0
[2025-10-11 04:37:53] 2025-10-11 02:37:34,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 04:37:53] 2025-10-11 02:37:53,042 | INFO     | PID=1552578 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 04:37:53] 2025-10-11 02:37:53,043 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 04:37:53] 2025-10-11 02:37:53,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 04:37:53] 2025-10-11 02:37:53,043 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 04:37:53] 2025-10-11 02:37:53,043 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 04:37:53] 2025-10-11 02:37:53,043 | INFO     | [monitor] control thread has ended
[2025-10-11 04:37:53] 2025-10-11 02:37:53,125 [wrapper] ==== pilot stdout END ====
[2025-10-11 04:37:53] 2025-10-11 02:37:53,127 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 04:37:53] 2025-10-11 02:37:53,128 [wrapper] pilotpid: 1552578
[2025-10-11 04:37:53] 2025-10-11 02:37:53,130 [wrapper] Pilot exit status: 0
[2025-10-11 04:37:53] 2025-10-11 02:37:53,137 [wrapper] pandaids: 6837355827
[2025-10-11 04:37:53] 2025-10-11 02:37:53,149 [wrapper] cleanup supervisor_pilot 1592024 1552579
[2025-10-11 04:37:53] 2025-10-11 02:37:53,151 [wrapper] Test setup, not cleaning
[2025-10-11 04:37:53] 2025-10-11 02:37:53,153 [wrapper] apfmon messages muted
[2025-10-11 04:37:53] 2025-10-11 02:37:53,154 [wrapper] ==== wrapper stdout END ====
[2025-10-11 04:37:53] 2025-10-11 02:37:53,156 [wrapper] ==== wrapper stderr END ====
[2025-10-11 04:37:53]  *** Error codes and diagnostics ***
[2025-10-11 04:37:53]     "exeErrorCode": 0,
[2025-10-11 04:37:53]     "exeErrorDiag": "",
[2025-10-11 04:37:53]     "pilotErrorCode": 0,
[2025-10-11 04:37:53]     "pilotErrorDiag": "",
[2025-10-11 04:37:53]  *** Listing of results directory ***
[2025-10-11 04:37:53] total 426876
[2025-10-11 04:37:53] -rw-r--r-- 1 root root    557409 Oct  9 20:06 pilot3.tar.gz
[2025-10-11 04:37:53] -rw-r--r-- 1 root root      5112 Oct  9 20:07 queuedata.json
[2025-10-11 04:37:53] -rwx------ 1 4871 1028     36292 Oct  9 20:08 runpilot2-wrapper.sh
[2025-10-11 04:37:53] -rw-r--r-- 1 root root       100 Oct 10 22:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 04:37:53] -rwxr-xr-x 1 root root      7986 Oct 10 22:43 run_atlas
[2025-10-11 04:37:53] -rw-r--r-- 1 root root       105 Oct 10 22:43 job.xml
[2025-10-11 04:37:53] -rw-r--r-- 2 root root     15120 Oct 10 22:43 start_atlas.sh
[2025-10-11 04:37:53] drwxrwx--x 2 root root      4096 Oct 10 22:43 shared
[2025-10-11 04:37:53] -rw-r--r-- 2 root root    569681 Oct 10 22:43 input.tar.gz
[2025-10-11 04:37:53] -rw-r--r-- 1 root root      6136 Oct 10 22:43 init_data.xml
[2025-10-11 04:37:53] -rw-r--r-- 2 root root 222317961 Oct 10 22:43 EVNT.46676267._000983.pool.root.1
[2025-10-11 04:37:53] -rw-r--r-- 1 root root         0 Oct 10 22:43 boinc_lockfile
[2025-10-11 04:37:53] -rw-r--r-- 1 root root      2549 Oct 10 22:43 pandaJob.out
[2025-10-11 04:37:53] -rw------- 1 root root    975533 Oct 10 22:43 agis_schedconf.cvmfs.json
[2025-10-11 04:37:53] drwxr-xr-x 5  320  320      4096 Oct 10 22:43 pilot3
[2025-10-11 04:37:53] -rw------- 1 root root 204149562 Oct 11 04:36 HITS.46676269._023962.pool.root.1
[2025-10-11 04:37:53] -rw-r--r-- 1 root root       530 Oct 11 04:36 boinc_task_state.xml
[2025-10-11 04:37:53] -rw------- 1 root root      1033 Oct 11 04:37 memory_monitor_summary.json
[2025-10-11 04:37:53] -rw------- 1 root root   1560580 Oct 11 04:37 agis_ddmendpoints.agis.ALL.json
[2025-10-11 04:37:53] -rw------- 1 root root    454426 Oct 11 04:37 log.46676269._023962.job.log.tgz.1
[2025-10-11 04:37:53] -rw------- 1 root root      7773 Oct 11 04:37 heartbeat.json
[2025-10-11 04:37:53] -rw-r--r-- 1 root root        28 Oct 11 04:37 wrapper_checkpoint.txt
[2025-10-11 04:37:53] -rw-r--r-- 1 root root      8192 Oct 11 04:37 boinc_mmap_file
[2025-10-11 04:37:53] -rw------- 1 root root       747 Oct 11 04:37 pilotlog.txt
[2025-10-11 04:37:53] -rw------- 1 root root        95 Oct 11 04:37 pilot_heartbeat.json
[2025-10-11 04:37:53] -rw------- 1 root root   2922999 Oct 11 04:37 log.46676269._023962.job.log.1
[2025-10-11 04:37:53] -rw------- 1 root root       357 Oct 11 04:37 output.list
[2025-10-11 04:37:53] -rw-r--r-- 1 root root       620 Oct 11 04:37 runtime_log
[2025-10-11 04:37:53] -rw------- 1 root root   3399680 Oct 11 04:37 result.tar.gz
[2025-10-11 04:37:53] -rw-r--r-- 1 root root      8767 Oct 11 04:37 runtime_log.err
[2025-10-11 04:37:53] -rw------- 1 root root       655 Oct 11 04:37 aMSLDmjEAR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmezaNDmEMWoLn.diag
[2025-10-11 04:37:53] -rw-r--r-- 1 root root     21098 Oct 11 04:37 stderr.txt
[2025-10-11 04:37:53] HITS file was successfully produced:
[2025-10-11 04:37:53] -rw------- 1 root root 204149562 Oct 11 04:36 shared/HITS.pool.root.1
[2025-10-11 04:37:53]  *** Contents of shared directory: ***
[2025-10-11 04:37:53] total 420376
[2025-10-11 04:37:53] -rw-r--r-- 2 root root     15120 Oct 10 22:43 start_atlas.sh
[2025-10-11 04:37:53] -rw-r--r-- 2 root root    569681 Oct 10 22:43 input.tar.gz
[2025-10-11 04:37:53] -rw-r--r-- 2 root root 222317961 Oct 10 22:43 ATLAS.root_0
[2025-10-11 04:37:53] -rw------- 1 root root 204149562 Oct 11 04:36 HITS.pool.root.1
[2025-10-11 04:37:53] -rw------- 1 root root   3399680 Oct 11 04:37 result.tar.gz
04:37:54 (1548942): run_atlas exited; CPU time 41364.810325
04:37:54 (1548942): called boinc_finish(0)

</stderr_txt>
]]>

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