Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:16:40 (686007): wrapper (7.7.26015): starting
12:16:40 (686007): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 12:16:40] Arguments: --nthreads 8
[2025-10-10 12:16:40] Threads: 8
[2025-10-10 12:16:40] Checking for CVMFS
[2025-10-10 12:16:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 12:16:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 12:16:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 12:16:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 12:16:43] 2.13.2.0 1101976 126610 274064 151555 1 64 29125140 32935937 26521 16776704 0 163426336 99.816 74188733 29249 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 12:16:43] CVMFS is ok
[2025-10-10 12:16:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 12:16:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 12:16:43] Further information can be found at the LHC@home message board.
[2025-10-10 12:16:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 12:16:43] Checking for apptainer binary...
[2025-10-10 12:16:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 12:16:43] Running /usr/bin/apptainer --version
[2025-10-10 12:16:43] apptainer version 1.4.3-1.el9
[2025-10-10 12:16:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 12:16:44] c-5-2.aglt2.org
[2025-10-10 12:16:44] apptainer works
[2025-10-10 12:16:44] Set ATHENA_PROC_NUMBER=8
[2025-10-10 12:16:44] Set ATHENA_CORE_NUMBER=8
[2025-10-10 12:16:44] Starting ATLAS job with PandaID=6837595752
[2025-10-10 12:16:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 18:35:49]  *** The last 200 lines of the pilot log: ***
[2025-10-10 18:35:49] 2025-10-10 22:34:53,845 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.204950000001
[2025-10-10 18:35:49] 2025-10-10 22:34:53,901 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6837595752/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 18:35:49] 2025-10-10 22:34:53,902 | INFO     | extracted standard info from prmon json
[2025-10-10 18:35:49] 2025-10-10 22:34:53,903 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 18:35:49] 2025-10-10 22:34:53,903 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 18:35:49] 2025-10-10 22:34:53,903 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 18:35:49] 2025-10-10 22:34:53,903 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 18:35:49] 2025-10-10 22:34:53,912 | INFO     | fitting pss+swap vs Time
[2025-10-10 18:35:49] 2025-10-10 22:34:53,913 | INFO     | sum of square deviations: 15453658018.86681
[2025-10-10 18:35:49] 2025-10-10 22:34:53,917 | INFO     | sum of deviations: -52934095663.923935
[2025-10-10 18:35:49] 2025-10-10 22:34:53,918 | INFO     | mean x: 1760124423.9809783
[2025-10-10 18:35:49] 2025-10-10 22:34:53,918 | INFO     | mean y: 2315572.0108695654
[2025-10-10 18:35:49] 2025-10-10 22:34:53,918 | INFO     | -- intersect: 6031347308.423667
[2025-10-10 18:35:49] 2025-10-10 22:34:53,918 | INFO     | intersect: 6031347308.423667
[2025-10-10 18:35:49] 2025-10-10 22:34:53,919 | INFO     | chi2: 2.889506970471278
[2025-10-10 18:35:49] 2025-10-10 22:34:53,919 | INFO     | sum of square deviations: 14832297916.633541
[2025-10-10 18:35:49] 2025-10-10 22:34:53,923 | INFO     | sum of deviations: -49510375025.085365
[2025-10-10 18:35:49] 2025-10-10 22:34:53,923 | INFO     | mean x: 1760124271.4820936
[2025-10-10 18:35:49] 2025-10-10 22:34:53,923 | INFO     | mean y: 2316409.217630854
[2025-10-10 18:35:49] 2025-10-10 22:34:53,924 | INFO     | -- intersect: 5877630757.78572
[2025-10-10 18:35:49] 2025-10-10 22:34:53,955 | INFO     | intersect: 5877630757.78572
[2025-10-10 18:35:49] 2025-10-10 22:34:53,956 | INFO     | chi2: 2.889288682528423
[2025-10-10 18:35:49] 2025-10-10 22:34:53,979 | INFO     | current chi2=2.889288682528423 (change=0.007554504802565668 %)
[2025-10-10 18:35:49] 2025-10-10 22:34:53,979 | INFO     | right removable region: 362
[2025-10-10 18:35:49] 2025-10-10 22:34:53,980 | INFO     | sum of square deviations: 14832166526.743753
[2025-10-10 18:35:49] 2025-10-10 22:34:54,072 | INFO     | sum of deviations: -124427732086.00826
[2025-10-10 18:35:49] 2025-10-10 22:34:54,072 | INFO     | mean x: 1760124576.4958677
[2025-10-10 18:35:49] 2025-10-10 22:34:54,072 | INFO     | mean y: 2333055.994490358
[2025-10-10 18:35:49] 2025-10-10 22:34:54,072 | INFO     | -- intersect: 14768099665.163456
[2025-10-10 18:35:49] 2025-10-10 22:34:54,073 | INFO     | intersect: 14768099665.163456
[2025-10-10 18:35:49] 2025-10-10 22:34:54,073 | INFO     | chi2: 0.8892918725416796
[2025-10-10 18:35:49] 2025-10-10 22:34:54,073 | INFO     | current chi2=0.8892918725416796 (change=69.22340448977577 %)
[2025-10-10 18:35:49] 2025-10-10 22:34:54,074 | INFO     | sum of square deviations: 14227559315.955269
[2025-10-10 18:35:49] 2025-10-10 22:34:54,090 | INFO     | sum of deviations: -139693935352.37997
[2025-10-10 18:35:49] 2025-10-10 22:34:54,090 | INFO     | mean x: 1760124729.0111732
[2025-10-10 18:35:49] 2025-10-10 22:34:54,090 | INFO     | mean y: 2336894.594972067
[2025-10-10 18:35:49] 2025-10-10 22:34:54,090 | INFO     | -- intersect: 17284201242.956913
[2025-10-10 18:35:49] 2025-10-10 22:34:54,090 | INFO     | intersect: 17284201242.956913
[2025-10-10 18:35:49] 2025-10-10 22:34:54,109 | INFO     | chi2: 0.7495090484707075
[2025-10-10 18:35:49] 2025-10-10 22:34:54,110 | INFO     | current chi2=0.7495090484707075 (change=15.718441648573675 %)
[2025-10-10 18:35:49] 2025-10-10 22:34:54,110 | INFO     | left removable region: 20
[2025-10-10 18:35:49] 2025-10-10 22:34:54,110 | INFO     | sum of square deviations: 12403806118.505886
[2025-10-10 18:35:49] 2025-10-10 22:34:54,120 | INFO     | sum of deviations: -115545252497.71931
[2025-10-10 18:35:49] 2025-10-10 22:34:54,120 | INFO     | mean x: 1760124851.0380118
[2025-10-10 18:35:49] 2025-10-10 22:34:54,120 | INFO     | mean y: 2332895.8245614036
[2025-10-10 18:35:49] 2025-10-10 22:34:54,120 | INFO     | -- intersect: 16398434898.5214
[2025-10-10 18:35:49] 2025-10-10 22:34:54,121 | INFO     | intersect: 16398434898.5214
[2025-10-10 18:35:49] 2025-10-10 22:34:54,121 | INFO     | chi2: 0.702417446767272
[2025-10-10 18:35:49] 2025-10-10 22:34:54,121 | INFO     | -- intersect: 16398434898.5214
[2025-10-10 18:35:49] 2025-10-10 22:34:54,121 | INFO     | current memory leak: -9.32 B/s (using 342 data points, chi2=0.70)
[2025-10-10 18:35:49] 2025-10-10 22:34:54,122 | INFO     | could have reported an average CPU frequency of 2600 MHz (16 samples)
[2025-10-10 18:35:49] 2025-10-10 22:34:54,122 | INFO     | ..............................
[2025-10-10 18:35:49] 2025-10-10 22:34:54,123 | INFO     | . Timing measurements:
[2025-10-10 18:35:49] 2025-10-10 22:34:54,123 | INFO     | . get job = 1 s
[2025-10-10 18:35:49] 2025-10-10 22:34:54,123 | INFO     | . initial setup = 4 s
[2025-10-10 18:35:49] 2025-10-10 22:34:54,123 | INFO     | . payload setup = 45 s
[2025-10-10 18:35:49] 2025-10-10 22:34:54,123 | INFO     | . stage-in = 0 s
[2025-10-10 18:35:49] 2025-10-10 22:34:54,123 | INFO     | . payload execution = 22472 s
[2025-10-10 18:35:49] 2025-10-10 22:34:54,123 | INFO     | . stage-out = 3 s
[2025-10-10 18:35:49] 2025-10-10 22:34:54,123 | INFO     | . log creation = 0 s
[2025-10-10 18:35:49] 2025-10-10 22:34:54,124 | INFO     | ..............................
[2025-10-10 18:35:49] 2025-10-10 22:34:54,975 | INFO     | 
[2025-10-10 18:35:49] 2025-10-10 22:34:54,975 | INFO     | job summary report
[2025-10-10 18:35:49] 2025-10-10 22:34:54,975 | INFO     | --------------------------------------------------
[2025-10-10 18:35:49] 2025-10-10 22:34:54,975 | INFO     | PanDA job id: 6837595752
[2025-10-10 18:35:49] 2025-10-10 22:34:54,975 | INFO     | task id: 46676269
[2025-10-10 18:35:49] 2025-10-10 22:34:54,975 | INFO     | errors: (none)
[2025-10-10 18:35:49] 2025-10-10 22:34:54,975 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 18:35:49] 2025-10-10 22:34:54,976 | INFO     | pilot state: finished 
[2025-10-10 18:35:49] 2025-10-10 22:34:54,976 | INFO     | transexitcode: 0
[2025-10-10 18:35:49] 2025-10-10 22:34:54,976 | INFO     | exeerrorcode: 0
[2025-10-10 18:35:49] 2025-10-10 22:34:54,976 | INFO     | exeerrordiag: 
[2025-10-10 18:35:49] 2025-10-10 22:34:54,976 | INFO     | exitcode: 0
[2025-10-10 18:35:49] 2025-10-10 22:34:54,976 | INFO     | exitmsg: OK
[2025-10-10 18:35:49] 2025-10-10 22:34:54,976 | INFO     | cpuconsumptiontime: 50033 s
[2025-10-10 18:35:49] 2025-10-10 22:34:54,976 | INFO     | nevents: 400
[2025-10-10 18:35:49] 2025-10-10 22:34:54,976 | INFO     | neventsw: 0
[2025-10-10 18:35:49] 2025-10-10 22:34:54,977 | INFO     | pid: 699591
[2025-10-10 18:35:49] 2025-10-10 22:34:54,977 | INFO     | pgrp: 699591
[2025-10-10 18:35:49] 2025-10-10 22:34:54,977 | INFO     | corecount: 8
[2025-10-10 18:35:49] 2025-10-10 22:34:54,977 | INFO     | event service: False
[2025-10-10 18:35:49] 2025-10-10 22:34:54,977 | INFO     | sizes: {0: 2347978, 1: 2348663, 2: 2348862, 3: 2348862, 15: 2348890, 25: 2348918, 33: 2349336, 36: 2349392, 22522: 2383308, 22525: 2392362, 22545: 2392500}
[2025-10-10 18:35:49] 2025-10-10 22:34:54,977 | INFO     | --------------------------------------------------
[2025-10-10 18:35:49] 2025-10-10 22:34:54,977 | INFO     | 
[2025-10-10 18:35:49] 2025-10-10 22:34:54,977 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-10 18:35:49] 2025-10-10 22:34:55,183 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 18:35:49] 2025-10-10 22:34:55,183 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 18:35:49] 2025-10-10 22:34:55,184 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 18:35:49] 2025-10-10 22:34:55,189 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 18:35:49] 2025-10-10 22:34:55,189 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 18:35:49] 2025-10-10 22:34:55,189 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 18:35:49] 2025-10-10 22:34:55,189 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 18:35:49] 2025-10-10 22:34:55,189 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 18:35:49] 2025-10-10 22:34:55,190 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 18:35:49] 2025-10-10 22:34:55,190 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 18:35:49] 2025-10-10 22:34:55,190 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 18:35:49] 2025-10-10 22:34:55,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 18:35:49] 2025-10-10 22:34:55,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 18:35:49] 2025-10-10 22:34:55,190 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 18:35:49] 2025-10-10 22:34:55,190 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 18:35:49] 2025-10-10 22:34:55,190 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 18:35:49] 2025-10-10 22:34:55,190 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 18:35:49] 2025-10-10 22:34:55,191 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 18:35:49] 2025-10-10 22:34:55,191 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 18:35:49] 2025-10-10 22:34:55,191 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 18:35:49] 2025-10-10 22:34:55,191 | INFO     | job 6837595752 has completed (purged errors)
[2025-10-10 18:35:49] 2025-10-10 22:34:55,191 | INFO     | overall cleanup function is called
[2025-10-10 18:35:49] 2025-10-10 22:34:55,489 | INFO     | PID=690762 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 18:35:49] 2025-10-10 22:34:55,489 | INFO     | .. there are 39 such processes running
[2025-10-10 18:35:49] 2025-10-10 22:34:56,310 | INFO     | --- collectZombieJob: --- 10, [699591]
[2025-10-10 18:35:49] 2025-10-10 22:34:56,310 | INFO     | zombie collector waiting for pid 699591
[2025-10-10 18:35:49] 2025-10-10 22:34:56,310 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 18:35:49] 2025-10-10 22:34:56,310 | INFO     | collected zombie processes
[2025-10-10 18:35:49] 2025-10-10 22:34:56,310 | INFO     | will attempt to kill all subprocesses of pid=699591
[2025-10-10 18:35:49] 2025-10-10 22:34:57,091 | INFO     | process IDs to be killed: [699591] (in reverse order)
[2025-10-10 18:35:49] 2025-10-10 22:34:57,230 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 18:35:49] 2025-10-10 22:34:57,230 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 18:35:49] 2025-10-10 22:34:57,328 | INFO     | did not find any defunct processes belonging to 699591
[2025-10-10 18:35:49] 2025-10-10 22:34:57,346 | INFO     | did not find any defunct processes belonging to 699591
[2025-10-10 18:35:49] 2025-10-10 22:34:57,347 | INFO     | ready for new job
[2025-10-10 18:35:49] 2025-10-10 22:34:57,347 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 18:35:49] 2025-10-10 22:34:57,350 | INFO     | ***************************************
[2025-10-10 18:35:49] 2025-10-10 22:34:57,350 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 18:35:49] 2025-10-10 22:34:57,351 | INFO     | ***************************************
[2025-10-10 18:35:49] 2025-10-10 22:34:57,351 | INFO     | 
[2025-10-10 18:35:49] 2025-10-10 22:34:57,366 | INFO     | architecture information:
[2025-10-10 18:35:49] 2025-10-10 22:34:57,367 | INFO     | executing command: cat /etc/os-release
[2025-10-10 18:35:49] 2025-10-10 22:34:57,390 | INFO     | cat /etc/os-release:
[2025-10-10 18:35:49] NAME="CentOS Linux"
[2025-10-10 18:35:49] VERSION="7 (Core)"
[2025-10-10 18:35:49] ID="centos"
[2025-10-10 18:35:49] ID_LIKE="rhel fedora"
[2025-10-10 18:35:49] VERSION_ID="7"
[2025-10-10 18:35:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 18:35:49] ANSI_COLOR="0;31"
[2025-10-10 18:35:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 18:35:49] HOME_URL="https://www.centos.org/"
[2025-10-10 18:35:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 18:35:49] 
[2025-10-10 18:35:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 18:35:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 18:35:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 18:35:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 18:35:49] 
[2025-10-10 18:35:49] 2025-10-10 22:34:57,390 | INFO     | ***************************************
[2025-10-10 18:35:49] 2025-10-10 22:34:57,893 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-10 18:35:49] 2025-10-10 22:34:58,014 | INFO     | sufficient remaining disk space (75721867264 B)
[2025-10-10 18:35:49] 2025-10-10 22:34:58,014 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 18:35:49] 2025-10-10 22:34:58,015 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 18:35:49] 2025-10-10 22:34:58,015 | INFO     | update_server=False
[2025-10-10 18:35:49] 2025-10-10 22:34:58,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 18:35:49] 2025-10-10 22:34:58,128 | INFO     | all job control threads have been joined
[2025-10-10 18:35:49] 2025-10-10 22:34:58,326 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 18:35:49] 2025-10-10 22:34:58,326 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 18:35:49] 2025-10-10 22:34:58,326 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 18:35:49] 2025-10-10 22:34:58,326 | INFO     | will abort loop
[2025-10-10 18:35:49] 2025-10-10 22:34:58,701 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 18:35:49] 2025-10-10 22:34:58,734 | INFO     | all data control threads have been joined
[2025-10-10 18:35:49] 2025-10-10 22:34:58,791 | INFO     | all payload control threads have been joined
[2025-10-10 18:35:49] 2025-10-10 22:34:59,020 | INFO     | [job] retrieve thread has finished
[2025-10-10 18:35:49] 2025-10-10 22:34:59,137 | INFO     | [job] control thread has finished
[2025-10-10 18:35:49] 2025-10-10 22:34:59,240 | INFO     | [data] copytool_in thread has finished
[2025-10-10 18:35:49] 2025-10-10 22:34:59,331 | INFO     | [job] job monitor thread has finished
[2025-10-10 18:35:49] 2025-10-10 22:34:59,402 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 18:35:49] 2025-10-10 22:34:59,740 | INFO     | [data] control thread has finished
[2025-10-10 18:35:49] 2025-10-10 22:34:59,809 | INFO     | [payload] control thread has finished
[2025-10-10 18:35:49] 2025-10-10 22:34:59,847 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 18:35:49] 2025-10-10 22:34:59,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 18:35:49] 2025-10-10 22:35:00,332 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 18:35:49] 2025-10-10 22:35:00,436 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 18:35:49] 2025-10-10 22:35:00,452 | INFO     | [job] validate thread has finished
[2025-10-10 18:35:49] 2025-10-10 22:35:00,453 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 18:35:49] 2025-10-10 22:35:00,491 | INFO     | [payload] failed_post thread has finished
[2025-10-10 18:35:49] 2025-10-10 22:35:00,594 | INFO     | [payload] validate_post thread has finished
[2025-10-10 18:35:49] 2025-10-10 22:35:00,711 | INFO     | [data] copytool_out thread has finished
[2025-10-10 18:35:49] 2025-10-10 22:35:00,989 | INFO     | [job] queue monitor thread has finished
[2025-10-10 18:35:49] 2025-10-10 22:35:03,859 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 18:35:49] 2025-10-10 22:35:28,066 | INFO     | PID=690762 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 18:35:49] 2025-10-10 22:35:28,067 | INFO     | .. there are 39 such processes running
[2025-10-10 18:35:49] 2025-10-10 22:35:28,067 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 18:35:49] 2025-10-10 22:35:28,067 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 18:35:49] 2025-10-10 22:35:28,067 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 18:35:49] 2025-10-10 22:35:41,839 | INFO     | [monitor] cgroup control has ended
[2025-10-10 18:35:49] 2025-10-10 22:35:43,354 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348943775552)>', '<ExcThread(monitor, started 140347778787072)>']
[2025-10-10 18:35:49] 2025-10-10 22:35:44,186 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 18:35:49] 2025-10-10 22:35:44,186 | INFO     | [monitor] control thread has ended
[2025-10-10 18:35:49] 2025-10-10 22:35:48,380 | INFO     | all workflow threads have been joined
[2025-10-10 18:35:49] 2025-10-10 22:35:48,380 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 18:35:49] 2025-10-10 22:35:48,381 | INFO     | traces error code: 0
[2025-10-10 18:35:49] 2025-10-10 22:35:48,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 18:35:49] 2025-10-10 22:35:49,096 [wrapper] ==== pilot stdout END ====
[2025-10-10 18:35:49] 2025-10-10 22:35:49,179 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 18:35:49] 2025-10-10 22:35:49,239 [wrapper] pilotpid: 690762
[2025-10-10 18:35:49] 2025-10-10 22:35:49,317 [wrapper] Pilot exit status: 0
[2025-10-10 18:35:49] 2025-10-10 22:35:49,382 [wrapper] pandaids: 6837595752
[2025-10-10 18:35:49] 2025-10-10 22:35:49,480 [wrapper] cleanup supervisor_pilot 1815592 690763
[2025-10-10 18:35:49] 2025-10-10 22:35:49,486 [wrapper] Test setup, not cleaning
[2025-10-10 18:35:49] 2025-10-10 22:35:49,490 [wrapper] apfmon messages muted
[2025-10-10 18:35:49] 2025-10-10 22:35:49,500 [wrapper] ==== wrapper stdout END ====
[2025-10-10 18:35:49] 2025-10-10 22:35:49,509 [wrapper] ==== wrapper stderr END ====
[2025-10-10 18:35:49]  *** Error codes and diagnostics ***
[2025-10-10 18:35:49]     "exeErrorCode": 0,
[2025-10-10 18:35:49]     "exeErrorDiag": "",
[2025-10-10 18:35:49]     "pilotErrorCode": 0,
[2025-10-10 18:35:49]     "pilotErrorDiag": "",
[2025-10-10 18:35:49]  *** Listing of results directory ***
[2025-10-10 18:35:49] total 413212
[2025-10-10 18:35:49] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 06:49 pilot3.tar.gz
[2025-10-10 18:35:49] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 06:50 queuedata.json
[2025-10-10 18:35:49] -rwx------. 1 boincer umatlas     36292 Oct 10 06:53 runpilot2-wrapper.sh
[2025-10-10 18:35:49] -rw-r--r--. 1 boincer umatlas       100 Oct 10 12:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 18:35:49] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 12:16 run_atlas
[2025-10-10 18:35:49] -rw-r--r--. 1 boincer umatlas       105 Oct 10 12:16 job.xml
[2025-10-10 18:35:49] -rw-r--r--. 2 boincer umatlas 220535231 Oct 10 12:16 EVNT.46676267._001514.pool.root.1
[2025-10-10 18:35:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 12:16 start_atlas.sh
[2025-10-10 18:35:49] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 12:16 shared
[2025-10-10 18:35:49] -rw-r--r--. 2 boincer umatlas    569685 Oct 10 12:16 input.tar.gz
[2025-10-10 18:35:49] -rw-r--r--. 1 boincer umatlas         0 Oct 10 12:16 boinc_lockfile
[2025-10-10 18:35:49] -rw-r--r--. 1 boincer umatlas      2549 Oct 10 12:16 pandaJob.out
[2025-10-10 18:35:49] -rw-------. 1 boincer umatlas    975525 Oct 10 12:17 agis_schedconf.cvmfs.json
[2025-10-10 18:35:49] drwx------. 5 boincer umatlas      4096 Oct 10 12:18 pilot3
[2025-10-10 18:35:49] -rw-r--r--. 1 boincer umatlas      6657 Oct 10 18:31 init_data.xml
[2025-10-10 18:35:49] -rw-------. 1 boincer umatlas 192250275 Oct 10 18:33 HITS.46676269._037268.pool.root.1
[2025-10-10 18:35:49] -rw-r--r--. 1 boincer umatlas       531 Oct 10 18:33 boinc_task_state.xml
[2025-10-10 18:35:49] -rw-------. 1 boincer umatlas      1043 Oct 10 18:34 memory_monitor_summary.json
[2025-10-10 18:35:49] -rw-------. 1 boincer umatlas        95 Oct 10 18:34 pilot_heartbeat.json
[2025-10-10 18:35:49] -rw-------. 1 boincer umatlas   1560580 Oct 10 18:34 agis_ddmendpoints.agis.ALL.json
[2025-10-10 18:35:49] -rw-------. 1 boincer umatlas    548179 Oct 10 18:34 log.46676269._037268.job.log.tgz.1
[2025-10-10 18:35:49] -rw-------. 1 boincer umatlas      7821 Oct 10 18:34 heartbeat.json
[2025-10-10 18:35:49] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 18:35 boinc_mmap_file
[2025-10-10 18:35:49] -rw-r--r--. 1 boincer umatlas        28 Oct 10 18:35 wrapper_checkpoint.txt
[2025-10-10 18:35:49] -rw-------. 1 boincer umatlas      5009 Oct 10 18:35 pilotlog.txt
[2025-10-10 18:35:49] -rw-------. 1 boincer umatlas   2672019 Oct 10 18:35 log.46676269._037268.job.log.1
[2025-10-10 18:35:49] -rw-------. 1 boincer umatlas       357 Oct 10 18:35 output.list
[2025-10-10 18:35:49] -rw-r--r--. 1 boincer umatlas       620 Oct 10 18:35 runtime_log
[2025-10-10 18:35:49] -rw-------. 1 boincer umatlas   3235840 Oct 10 18:35 result.tar.gz
[2025-10-10 18:35:49] -rw-r--r--. 1 boincer umatlas      8689 Oct 10 18:35 runtime_log.err
[2025-10-10 18:35:49] -rw-------. 1 boincer umatlas       654 Oct 10 18:35 NeQMDmdvPR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmaoPMDmUnW8om.diag
[2025-10-10 18:35:49] -rw-r--r--. 1 boincer umatlas     21306 Oct 10 18:35 stderr.txt
[2025-10-10 18:35:49] HITS file was successfully produced:
[2025-10-10 18:35:49] -rw-------. 1 boincer umatlas 192250275 Oct 10 18:33 shared/HITS.pool.root.1
[2025-10-10 18:35:49]  *** Contents of shared directory: ***
[2025-10-10 18:35:49] total 406860
[2025-10-10 18:35:49] -rw-r--r--. 2 boincer umatlas 220535231 Oct 10 12:16 ATLAS.root_0
[2025-10-10 18:35:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 12:16 start_atlas.sh
[2025-10-10 18:35:49] -rw-r--r--. 2 boincer umatlas    569685 Oct 10 12:16 input.tar.gz
[2025-10-10 18:35:49] -rw-------. 1 boincer umatlas 192250275 Oct 10 18:33 HITS.pool.root.1
[2025-10-10 18:35:49] -rw-------. 1 boincer umatlas   3235840 Oct 10 18:35 result.tar.gz
18:35:51 (686007): run_atlas exited; CPU time 50885.524485
18:35:51 (686007): called boinc_finish(0)

</stderr_txt>
]]>

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