Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:25:01 (3449207): wrapper (7.7.26015): starting
12:25:01 (3449207): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 12:25:01] Arguments: --nthreads 8
[2025-10-10 12:25:01] Threads: 8
[2025-10-10 12:25:01] Checking for CVMFS
[2025-10-10 12:25:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 12:25:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 12:25:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 12:25:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 12:25:01] 2.13.1.0 4140 1594 66268 151555 2 57 32440153 39288833 3664 16776704 0 5470490 99.998 54512 37007 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 12:25:01] CVMFS is ok
[2025-10-10 12:25:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 12:25:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 12:25:01] Further information can be found at the LHC@home message board.
[2025-10-10 12:25:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 12:25:01] Checking for apptainer binary...
[2025-10-10 12:25:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 12:25:01] Running /usr/bin/apptainer --version
[2025-10-10 12:25:01] apptainer version 1.4.3-1.el9
[2025-10-10 12:25:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 12:25:01] c-210-16.aglt2.org
[2025-10-10 12:25:01] apptainer works
[2025-10-10 12:25:01] Set ATHENA_PROC_NUMBER=8
[2025-10-10 12:25:01] Set ATHENA_CORE_NUMBER=8
[2025-10-10 12:25:01] Starting ATLAS job with PandaID=6837510316
[2025-10-10 12:25:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 14:09:29]  *** The last 200 lines of the pilot log: ***
[2025-10-10 14:09:29] 2025-10-10 18:08:47,871 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 14:09:29] 2025-10-10 18:08:47,871 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 14:09:29] 2025-10-10 18:08:47,873 | INFO     | fitting pss+swap vs Time
[2025-10-10 14:09:29] 2025-10-10 18:08:47,874 | INFO     | sum of square deviations: 329031285.5
[2025-10-10 14:09:29] 2025-10-10 18:08:47,874 | INFO     | sum of deviations: -15968871000.5
[2025-10-10 14:09:29] 2025-10-10 18:08:47,874 | INFO     | mean x: 1760116616.5
[2025-10-10 14:09:29] 2025-10-10 18:08:47,875 | INFO     | mean y: 2585218.8921568627
[2025-10-10 14:09:29] 2025-10-10 18:08:47,875 | INFO     | -- intersect: 85426301544.26581
[2025-10-10 14:09:29] 2025-10-10 18:08:47,875 | INFO     | intersect: 85426301544.26581
[2025-10-10 14:09:29] 2025-10-10 18:08:47,875 | INFO     | chi2: 2.1192873382420716
[2025-10-10 14:09:29] 2025-10-10 18:08:47,876 | INFO     | sum of square deviations: 282974608.0
[2025-10-10 14:09:29] 2025-10-10 18:08:47,876 | INFO     | sum of deviations: -8289346180.999996
[2025-10-10 14:09:29] 2025-10-10 18:08:47,876 | INFO     | mean x: 1760116464.0
[2025-10-10 14:09:29] 2025-10-10 18:08:47,876 | INFO     | mean y: 2609810.3298969073
[2025-10-10 14:09:29] 2025-10-10 18:08:47,877 | INFO     | -- intersect: 51562764949.668816
[2025-10-10 14:09:29] 2025-10-10 18:08:47,877 | INFO     | intersect: 51562764949.668816
[2025-10-10 14:09:29] 2025-10-10 18:08:47,877 | INFO     | chi2: 1.446642582557139
[2025-10-10 14:09:29] 2025-10-10 18:08:47,877 | INFO     | current chi2=1.446642582557139 (change=31.739195697874784 %)
[2025-10-10 14:09:29] 2025-10-10 18:08:47,877 | INFO     | sum of square deviations: 241429643.0
[2025-10-10 14:09:29] 2025-10-10 18:08:47,878 | INFO     | sum of deviations: -7070341762.0
[2025-10-10 14:09:29] 2025-10-10 18:08:47,878 | INFO     | mean x: 1760116311.5
[2025-10-10 14:09:29] 2025-10-10 18:08:47,878 | INFO     | mean y: 2614289.0
[2025-10-10 14:09:29] 2025-10-10 18:08:47,878 | INFO     | -- intersect: 51548164820.986046
[2025-10-10 14:09:29] 2025-10-10 18:08:47,878 | INFO     | intersect: 51548164820.986046
[2025-10-10 14:09:29] 2025-10-10 18:08:47,879 | INFO     | chi2: 1.446648846696852
[2025-10-10 14:09:29] 2025-10-10 18:08:47,879 | INFO     | current chi2=1.446648846696852 (change=-0.0004330122580705982 %)
[2025-10-10 14:09:29] 2025-10-10 18:08:47,879 | INFO     | right removable region: 91
[2025-10-10 14:09:29] 2025-10-10 18:08:47,879 | INFO     | sum of square deviations: 282974608.0
[2025-10-10 14:09:29] 2025-10-10 18:08:47,880 | INFO     | sum of deviations: -29154806650.0
[2025-10-10 14:09:29] 2025-10-10 18:08:47,880 | INFO     | mean x: 1760116769.0
[2025-10-10 14:09:29] 2025-10-10 18:08:47,880 | INFO     | mean y: 2627705.3711340204
[2025-10-10 14:09:29] 2025-10-10 18:08:47,880 | INFO     | -- intersect: 181347040351.81506
[2025-10-10 14:09:29] 2025-10-10 18:08:47,880 | INFO     | intersect: 181347040351.81506
[2025-10-10 14:09:29] 2025-10-10 18:08:47,880 | INFO     | chi2: 0.801153684666399
[2025-10-10 14:09:29] 2025-10-10 18:08:47,881 | INFO     | current chi2=0.801153684666399 (change=62.19702396132144 %)
[2025-10-10 14:09:29] 2025-10-10 18:08:47,881 | INFO     | sum of square deviations: 241429643.0
[2025-10-10 14:09:29] 2025-10-10 18:08:47,881 | INFO     | sum of deviations: -25660719879.0
[2025-10-10 14:09:29] 2025-10-10 18:08:47,881 | INFO     | mean x: 1760116921.5
[2025-10-10 14:09:29] 2025-10-10 18:08:47,882 | INFO     | mean y: 2614832.4782608696
[2025-10-10 14:09:29] 2025-10-10 18:08:47,882 | INFO     | -- intersect: 187079341267.84534
[2025-10-10 14:09:29] 2025-10-10 18:08:47,882 | INFO     | intersect: 187079341267.84534
[2025-10-10 14:09:29] 2025-10-10 18:08:47,882 | INFO     | chi2: 0.8024026663127575
[2025-10-10 14:09:29] 2025-10-10 18:08:47,882 | INFO     | current chi2=0.8024026663127575 (change=-0.15589788454614995 %)
[2025-10-10 14:09:29] 2025-10-10 18:08:47,882 | INFO     | left removable region: 20
[2025-10-10 14:09:29] 2025-10-10 18:08:47,883 | INFO     | sum of square deviations: 110960220.0
[2025-10-10 14:09:29] 2025-10-10 18:08:47,883 | INFO     | sum of deviations: -10150510044.0
[2025-10-10 14:09:29] 2025-10-10 18:08:47,883 | INFO     | mean x: 1760116891.0
[2025-10-10 14:09:29] 2025-10-10 18:08:47,883 | INFO     | mean y: 2616668.76056338
[2025-10-10 14:09:29] 2025-10-10 18:08:47,883 | INFO     | -- intersect: 161016033735.7919
[2025-10-10 14:09:29] 2025-10-10 18:08:47,883 | INFO     | intersect: 161016033735.7919
[2025-10-10 14:09:29] 2025-10-10 18:08:47,884 | INFO     | chi2: 0.06744726003365739
[2025-10-10 14:09:29] 2025-10-10 18:08:47,884 | INFO     | -- intersect: 161016033735.7919
[2025-10-10 14:09:29] 2025-10-10 18:08:47,884 | INFO     | current memory leak: -91.48 B/s (using 71 data points, chi2=0.07)
[2025-10-10 14:09:29] 2025-10-10 18:08:47,884 | INFO     | could have reported an average CPU frequency of 2634 MHz (7 samples)
[2025-10-10 14:09:29] 2025-10-10 18:08:47,884 | INFO     | ..............................
[2025-10-10 14:09:29] 2025-10-10 18:08:47,885 | INFO     | . Timing measurements:
[2025-10-10 14:09:29] 2025-10-10 18:08:47,885 | INFO     | . get job = 0 s
[2025-10-10 14:09:29] 2025-10-10 18:08:47,885 | INFO     | . initial setup = 2 s
[2025-10-10 14:09:29] 2025-10-10 18:08:47,885 | INFO     | . payload setup = 5 s
[2025-10-10 14:09:29] 2025-10-10 18:08:47,885 | INFO     | . stage-in = 0 s
[2025-10-10 14:09:29] 2025-10-10 18:08:47,885 | INFO     | . payload execution = 6183 s
[2025-10-10 14:09:29] 2025-10-10 18:08:47,885 | INFO     | . stage-out = 0 s
[2025-10-10 14:09:29] 2025-10-10 18:08:47,886 | INFO     | . log creation = 0 s
[2025-10-10 14:09:29] 2025-10-10 18:08:47,886 | INFO     | ..............................
[2025-10-10 14:09:29] 2025-10-10 18:08:48,229 | INFO     | 
[2025-10-10 14:09:29] 2025-10-10 18:08:48,229 | INFO     | job summary report
[2025-10-10 14:09:29] 2025-10-10 18:08:48,229 | INFO     | --------------------------------------------------
[2025-10-10 14:09:29] 2025-10-10 18:08:48,229 | INFO     | PanDA job id: 6837510316
[2025-10-10 14:09:29] 2025-10-10 18:08:48,230 | INFO     | task id: 46676269
[2025-10-10 14:09:29] 2025-10-10 18:08:48,230 | INFO     | errors: (none)
[2025-10-10 14:09:29] 2025-10-10 18:08:48,230 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 14:09:29] 2025-10-10 18:08:48,230 | INFO     | pilot state: finished 
[2025-10-10 14:09:29] 2025-10-10 18:08:48,230 | INFO     | transexitcode: 0
[2025-10-10 14:09:29] 2025-10-10 18:08:48,230 | INFO     | exeerrorcode: 0
[2025-10-10 14:09:29] 2025-10-10 18:08:48,230 | INFO     | exeerrordiag: 
[2025-10-10 14:09:29] 2025-10-10 18:08:48,230 | INFO     | exitcode: 0
[2025-10-10 14:09:29] 2025-10-10 18:08:48,230 | INFO     | exitmsg: OK
[2025-10-10 14:09:29] 2025-10-10 18:08:48,230 | INFO     | cpuconsumptiontime: 45343 s
[2025-10-10 14:09:29] 2025-10-10 18:08:48,231 | INFO     | nevents: 400
[2025-10-10 14:09:29] 2025-10-10 18:08:48,231 | INFO     | neventsw: 0
[2025-10-10 14:09:29] 2025-10-10 18:08:48,231 | INFO     | pid: 3459565
[2025-10-10 14:09:29] 2025-10-10 18:08:48,231 | INFO     | pgrp: 3459565
[2025-10-10 14:09:29] 2025-10-10 18:08:48,231 | INFO     | corecount: 8
[2025-10-10 14:09:29] 2025-10-10 18:08:48,231 | INFO     | event service: False
[2025-10-10 14:09:29] 2025-10-10 18:08:48,231 | INFO     | sizes: {0: 2348683, 1: 2348882, 5: 2349144, 12: 2349200, 6192: 2376099, 6194: 2385281, 6201: 2385419}
[2025-10-10 14:09:29] 2025-10-10 18:08:48,231 | INFO     | --------------------------------------------------
[2025-10-10 14:09:29] 2025-10-10 18:08:48,231 | INFO     | 
[2025-10-10 14:09:29] 2025-10-10 18:08:48,232 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-10 14:09:29] 2025-10-10 18:08:48,251 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 14:09:29] 2025-10-10 18:08:48,251 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 14:09:29] 2025-10-10 18:08:48,251 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 14:09:29] 2025-10-10 18:08:48,251 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 14:09:29] 2025-10-10 18:08:48,251 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 14:09:29] 2025-10-10 18:08:48,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 14:09:29] 2025-10-10 18:08:48,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 14:09:29] 2025-10-10 18:08:48,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 14:09:29] 2025-10-10 18:08:48,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 14:09:29] 2025-10-10 18:08:48,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 14:09:29] 2025-10-10 18:08:48,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 14:09:29] 2025-10-10 18:08:48,252 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 14:09:29] 2025-10-10 18:08:48,252 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 14:09:29] 2025-10-10 18:08:48,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 14:09:29] 2025-10-10 18:08:48,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 14:09:29] 2025-10-10 18:08:48,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 14:09:29] 2025-10-10 18:08:48,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 14:09:29] 2025-10-10 18:08:48,253 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 14:09:29] 2025-10-10 18:08:48,253 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 14:09:29] 2025-10-10 18:08:48,253 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 14:09:29] 2025-10-10 18:08:48,253 | INFO     | job 6837510316 has completed (purged errors)
[2025-10-10 14:09:29] 2025-10-10 18:08:48,254 | INFO     | overall cleanup function is called
[2025-10-10 14:09:29] 2025-10-10 18:08:49,260 | INFO     | --- collectZombieJob: --- 10, [3459565]
[2025-10-10 14:09:29] 2025-10-10 18:08:49,260 | INFO     | zombie collector waiting for pid 3459565
[2025-10-10 14:09:29] 2025-10-10 18:08:49,260 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 14:09:29] 2025-10-10 18:08:49,260 | INFO     | collected zombie processes
[2025-10-10 14:09:29] 2025-10-10 18:08:49,261 | INFO     | will attempt to kill all subprocesses of pid=3459565
[2025-10-10 14:09:29] 2025-10-10 18:08:49,480 | INFO     | process IDs to be killed: [3459565] (in reverse order)
[2025-10-10 14:09:29] 2025-10-10 18:08:49,544 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 14:09:29] 2025-10-10 18:08:49,544 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 14:09:29] 2025-10-10 18:08:49,550 | INFO     | did not find any defunct processes belonging to 3459565
[2025-10-10 14:09:29] 2025-10-10 18:08:49,555 | INFO     | did not find any defunct processes belonging to 3459565
[2025-10-10 14:09:29] 2025-10-10 18:08:49,556 | INFO     | ready for new job
[2025-10-10 14:09:29] 2025-10-10 18:08:49,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 14:09:29] 2025-10-10 18:08:49,557 | INFO     | ***************************************
[2025-10-10 14:09:29] 2025-10-10 18:08:49,558 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 14:09:29] 2025-10-10 18:08:49,558 | INFO     | ***************************************
[2025-10-10 14:09:29] 2025-10-10 18:08:49,558 | INFO     | 
[2025-10-10 14:09:29] 2025-10-10 18:08:49,560 | INFO     | architecture information:
[2025-10-10 14:09:29] 2025-10-10 18:08:49,560 | INFO     | executing command: cat /etc/os-release
[2025-10-10 14:09:29] 2025-10-10 18:08:49,574 | INFO     | cat /etc/os-release:
[2025-10-10 14:09:29] NAME="CentOS Linux"
[2025-10-10 14:09:29] VERSION="7 (Core)"
[2025-10-10 14:09:29] ID="centos"
[2025-10-10 14:09:29] ID_LIKE="rhel fedora"
[2025-10-10 14:09:29] VERSION_ID="7"
[2025-10-10 14:09:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 14:09:29] ANSI_COLOR="0;31"
[2025-10-10 14:09:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 14:09:29] HOME_URL="https://www.centos.org/"
[2025-10-10 14:09:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 14:09:29] 
[2025-10-10 14:09:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 14:09:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 14:09:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 14:09:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 14:09:29] 
[2025-10-10 14:09:29] 2025-10-10 18:08:49,574 | INFO     | ***************************************
[2025-10-10 14:09:29] 2025-10-10 18:08:50,075 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-10 14:09:29] 2025-10-10 18:08:50,091 | INFO     | sufficient remaining disk space (51646562304 B)
[2025-10-10 14:09:29] 2025-10-10 18:08:50,092 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 14:09:29] 2025-10-10 18:08:50,092 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 14:09:29] 2025-10-10 18:08:50,092 | INFO     | update_server=False
[2025-10-10 14:09:29] 2025-10-10 18:08:50,092 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 14:09:29] 2025-10-10 18:08:50,092 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 14:09:29] 2025-10-10 18:08:50,191 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 14:09:29] 2025-10-10 18:08:50,191 | INFO     | aborting loop
[2025-10-10 14:09:29] 2025-10-10 18:08:50,490 | INFO     | all payload control threads have been joined
[2025-10-10 14:09:29] 2025-10-10 18:08:50,709 | INFO     | all job control threads have been joined
[2025-10-10 14:09:29] 2025-10-10 18:08:50,891 | INFO     | all data control threads have been joined
[2025-10-10 14:09:29] 2025-10-10 18:08:51,097 | INFO     | [job] retrieve thread has finished
[2025-10-10 14:09:29] 2025-10-10 18:08:51,196 | INFO     | [job] job monitor thread has finished
[2025-10-10 14:09:29] 2025-10-10 18:08:51,315 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 14:09:29] 2025-10-10 18:08:51,495 | INFO     | [payload] control thread has finished
[2025-10-10 14:09:29] 2025-10-10 18:08:51,714 | INFO     | [job] control thread has finished
[2025-10-10 14:09:29] 2025-10-10 18:08:51,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 14:09:29] 2025-10-10 18:08:51,868 | INFO     | [payload] validate_post thread has finished
[2025-10-10 14:09:29] 2025-10-10 18:08:51,896 | INFO     | [data] control thread has finished
[2025-10-10 14:09:29] 2025-10-10 18:08:52,067 | INFO     | [data] copytool_in thread has finished
[2025-10-10 14:09:29] 2025-10-10 18:08:52,097 | INFO     | [data] copytool_out thread has finished
[2025-10-10 14:09:29] 2025-10-10 18:08:52,321 | INFO     | [job] validate thread has finished
[2025-10-10 14:09:29] 2025-10-10 18:08:52,400 | INFO     | [payload] failed_post thread has finished
[2025-10-10 14:09:29] 2025-10-10 18:08:52,475 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 14:09:29] 2025-10-10 18:08:52,570 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 14:09:29] 2025-10-10 18:08:52,999 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 14:09:29] 2025-10-10 18:08:54,004 | INFO     | [job] queue monitor thread has finished
[2025-10-10 14:09:29] 2025-10-10 18:08:55,809 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 14:09:29] 2025-10-10 18:09:01,022 | INFO     | job.realtimelogging is not enabled
[2025-10-10 14:09:29] 2025-10-10 18:09:02,027 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 14:09:29] 2025-10-10 18:09:20,352 | INFO     | PID=3453239 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 14:09:29] 2025-10-10 18:09:20,352 | INFO     | .. there are 5 such processes running
[2025-10-10 14:09:29] 2025-10-10 18:09:20,353 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 14:09:29] 2025-10-10 18:09:20,353 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 14:09:29] 2025-10-10 18:09:20,353 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 14:09:29] 2025-10-10 18:09:21,750 | INFO     | [monitor] cgroup control has ended
[2025-10-10 14:09:29] 2025-10-10 18:09:23,860 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139623213799232)>', '<ExcThread(monitor, started 139622709442304)>']
[2025-10-10 14:09:29] 2025-10-10 18:09:24,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 14:09:29] 2025-10-10 18:09:24,374 | INFO     | [monitor] control thread has ended
[2025-10-10 14:09:29] 2025-10-10 18:09:28,886 | INFO     | all workflow threads have been joined
[2025-10-10 14:09:29] 2025-10-10 18:09:28,886 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 14:09:29] 2025-10-10 18:09:28,886 | INFO     | traces error code: 0
[2025-10-10 14:09:29] 2025-10-10 18:09:28,887 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 14:09:29] 2025-10-10 18:09:28,992 [wrapper] ==== pilot stdout END ====
[2025-10-10 14:09:29] 2025-10-10 18:09:28,995 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 14:09:29] 2025-10-10 18:09:28,998 [wrapper] pilotpid: 3453239
[2025-10-10 14:09:29] 2025-10-10 18:09:29,000 [wrapper] Pilot exit status: 0
[2025-10-10 14:09:29] 2025-10-10 18:09:29,010 [wrapper] pandaids: 6837510316
[2025-10-10 14:09:29] 2025-10-10 18:09:29,051 [wrapper] cleanup supervisor_pilot 3640620 3453240
[2025-10-10 14:09:29] 2025-10-10 18:09:29,053 [wrapper] Test setup, not cleaning
[2025-10-10 14:09:29] 2025-10-10 18:09:29,056 [wrapper] apfmon messages muted
[2025-10-10 14:09:29] 2025-10-10 18:09:29,058 [wrapper] ==== wrapper stdout END ====
[2025-10-10 14:09:29] 2025-10-10 18:09:29,061 [wrapper] ==== wrapper stderr END ====
[2025-10-10 14:09:29]  *** Error codes and diagnostics ***
[2025-10-10 14:09:29]     "exeErrorCode": 0,
[2025-10-10 14:09:29]     "exeErrorDiag": "",
[2025-10-10 14:09:29]     "pilotErrorCode": 0,
[2025-10-10 14:09:29]     "pilotErrorDiag": "",
[2025-10-10 14:09:29]  *** Listing of results directory ***
[2025-10-10 14:09:29] total 410772
[2025-10-10 14:09:29] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 04:04 queuedata.json
[2025-10-10 14:09:29] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 04:04 pilot3.tar.gz
[2025-10-10 14:09:29] -rwx------. 1 boincer umatlas     36292 Oct 10 04:05 runpilot2-wrapper.sh
[2025-10-10 14:09:29] -rw-r--r--. 1 boincer umatlas       100 Oct 10 12:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 14:09:29] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 12:25 run_atlas
[2025-10-10 14:09:29] -rw-r--r--. 1 boincer umatlas       105 Oct 10 12:25 job.xml
[2025-10-10 14:09:29] -rw-r--r--. 2 boincer umatlas 222410512 Oct 10 12:25 EVNT.46676267._001421.pool.root.1
[2025-10-10 14:09:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 12:25 start_atlas.sh
[2025-10-10 14:09:29] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 12:25 shared
[2025-10-10 14:09:29] -rw-r--r--. 2 boincer umatlas    569678 Oct 10 12:25 input.tar.gz
[2025-10-10 14:09:29] -rw-r--r--. 1 boincer umatlas         0 Oct 10 12:25 boinc_lockfile
[2025-10-10 14:09:29] -rw-r--r--. 1 boincer umatlas      2548 Oct 10 12:25 pandaJob.out
[2025-10-10 14:09:29] -rw-------. 1 boincer umatlas    975525 Oct 10 12:25 agis_schedconf.cvmfs.json
[2025-10-10 14:09:29] -rw-------. 1 boincer umatlas   1560580 Oct 10 12:25 agis_ddmendpoints.agis.ALL.json
[2025-10-10 14:09:29] drwx------. 5 boincer umatlas      4096 Oct 10 12:25 pilot3
[2025-10-10 14:09:29] -rw-r--r--. 1 boincer umatlas      6659 Oct 10 14:02 init_data.xml
[2025-10-10 14:09:29] -rw-------. 1 boincer umatlas 191827895 Oct 10 14:08 HITS.46676269._034931.pool.root.1
[2025-10-10 14:09:29] -rw-r--r--. 1 boincer umatlas       530 Oct 10 14:08 boinc_task_state.xml
[2025-10-10 14:09:29] -rw-------. 1 boincer umatlas      1032 Oct 10 14:08 memory_monitor_summary.json
[2025-10-10 14:09:29] -rw-------. 1 boincer umatlas    337265 Oct 10 14:08 log.46676269._034931.job.log.tgz.1
[2025-10-10 14:09:29] -rw-------. 1 boincer umatlas      7819 Oct 10 14:08 heartbeat.json
[2025-10-10 14:09:29] -rw-------. 1 boincer umatlas        95 Oct 10 14:09 pilot_heartbeat.json
[2025-10-10 14:09:29] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 14:09 boinc_mmap_file
[2025-10-10 14:09:29] -rw-------. 1 boincer umatlas      4895 Oct 10 14:09 pilotlog.txt
[2025-10-10 14:09:29] -rw-r--r--. 1 boincer umatlas        27 Oct 10 14:09 wrapper_checkpoint.txt
[2025-10-10 14:09:29] -rw-------. 1 boincer umatlas    907301 Oct 10 14:09 log.46676269._034931.job.log.1
[2025-10-10 14:09:29] -rw-------. 1 boincer umatlas       357 Oct 10 14:09 output.list
[2025-10-10 14:09:29] -rw-r--r--. 1 boincer umatlas       620 Oct 10 14:09 runtime_log
[2025-10-10 14:09:29] -rw-------. 1 boincer umatlas   1259520 Oct 10 14:09 result.tar.gz
[2025-10-10 14:09:29] -rw-r--r--. 1 boincer umatlas      8703 Oct 10 14:09 runtime_log.err
[2025-10-10 14:09:29] -rw-------. 1 boincer umatlas       652 Oct 10 14:09 kzBNDmfJNR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmlZPMDmj5aXIm.diag
[2025-10-10 14:09:29] -rw-r--r--. 1 boincer umatlas     20845 Oct 10 14:09 stderr.txt
[2025-10-10 14:09:29] HITS file was successfully produced:
[2025-10-10 14:09:29] -rw-------. 1 boincer umatlas 191827895 Oct 10 14:08 shared/HITS.pool.root.1
[2025-10-10 14:09:29]  *** Contents of shared directory: ***
[2025-10-10 14:09:29] total 406348
[2025-10-10 14:09:29] -rw-r--r--. 2 boincer umatlas 222410512 Oct 10 12:25 ATLAS.root_0
[2025-10-10 14:09:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 12:25 start_atlas.sh
[2025-10-10 14:09:29] -rw-r--r--. 2 boincer umatlas    569678 Oct 10 12:25 input.tar.gz
[2025-10-10 14:09:29] -rw-------. 1 boincer umatlas 191827895 Oct 10 14:08 HITS.pool.root.1
[2025-10-10 14:09:29] -rw-------. 1 boincer umatlas   1259520 Oct 10 14:09 result.tar.gz
14:09:30 (3449207): run_atlas exited; CPU time 45457.179553
14:09:30 (3449207): called boinc_finish(0)

</stderr_txt>
]]>

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