Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
16:13:15 (54080): wrapper (7.7.26015): starting
16:13:15 (54080): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 16:13:15] Arguments: --nthreads 12
[2025-10-10 16:13:15] Threads: 12
[2025-10-10 16:13:15] Checking for CVMFS
[2025-10-10 16:13:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 16:13:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 16:13:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 16:13:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 16:13:15] 2.13.2.0 3843265 2049 62368 151560 0 188 6112099 6144000 3671 130560 0 12220149 99.998 190481 553 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-10 16:13:15] CVMFS is ok
[2025-10-10 16:13:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 16:13:15] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-10 16:13:15] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-10 16:13:15] Further information can be found at the LHC@home message board.
[2025-10-10 16:13:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 16:13:15] Checking for apptainer binary...
[2025-10-10 16:13:15] apptainer is not installed, using version from CVMFS
[2025-10-10 16:13:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 16:13:16] XeonFire
[2025-10-10 16:13:16] apptainer works
[2025-10-10 16:13:16] Set ATHENA_PROC_NUMBER=12
[2025-10-10 16:13:16] Set ATHENA_CORE_NUMBER=12
[2025-10-10 16:13:16] Starting ATLAS job with PandaID=6837376994
[2025-10-10 16:13:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 17:07:54]  *** The last 200 lines of the pilot log: ***
[2025-10-10 17:07:54]  scope=mc23_13p6TeV
[2025-10-10 17:07:54]  status=None
[2025-10-10 17:07:54]  status_code=0
[2025-10-10 17:07:54]  storage_token=
[2025-10-10 17:07:54]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6837376994/log.46676269._028756.job.log.tgz.1
[2025-10-10 17:07:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/35/log.46676269._028756.job.log.tgz.1
[2025-10-10 17:07:54]  workdir=None
[2025-10-10 17:07:54] ]
[2025-10-10 17:07:54] 2025-10-10 22:07:04,425 | INFO     | monitor loop #237: job 0:6837376994 is in state 'stageout'
[2025-10-10 17:07:54] 2025-10-10 22:07:04,436 | WARNING  | aborting job monitor tasks since payload process 67372 is not running
[2025-10-10 17:07:54] 2025-10-10 22:07:04,438 | INFO     | transferring file log.46676269._028756.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6837376994/log.46676269._028756.job.log.tgz.1 to /var/lib/boinc
[2025-10-10 17:07:54] 2025-10-10 22:07:04,438 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6837376994/log.46676269._028756.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.466762
[2025-10-10 17:07:54] 2025-10-10 22:07:04,457 | INFO     | adding to output.list: log.46676269._028756.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/35/log.46676269._028756.job.log.tg
[2025-10-10 17:07:54] 2025-10-10 22:07:04,457 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 17:07:54] 2025-10-10 22:07:04,457 | INFO     | summary of transferred files:
[2025-10-10 17:07:54] 2025-10-10 22:07:04,457 | INFO     |  -- lfn=log.46676269._028756.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 17:07:54] 2025-10-10 22:07:04,457 | INFO     | stage-out finished correctly
[2025-10-10 17:07:54] 2025-10-10 22:07:04,509 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 17:07:54] 2025-10-10 22:07:05,531 | INFO     | time since job start (3201s) is within the limit (172800.0s)
[2025-10-10 17:07:54] 2025-10-10 22:07:06,927 | INFO     | PID=60340 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 17:07:54] 2025-10-10 22:07:06,927 | INFO     | .. there are 5 such processes running
[2025-10-10 17:07:54] 2025-10-10 22:07:06,941 | INFO     | monitor loop #238: job 0:6837376994 is in state 'finished'
[2025-10-10 17:07:54] 2025-10-10 22:07:06,941 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 17:07:54] 2025-10-10 22:07:07,179 | INFO     | job 6837376994 has state=finished
[2025-10-10 17:07:54] 2025-10-10 22:07:07,179 | INFO     | preparing for final server update for job 6837376994 in state='finished'
[2025-10-10 17:07:54] 2025-10-10 22:07:07,180 | INFO     | this job has now completed (state=finished)
[2025-10-10 17:07:54] 2025-10-10 22:07:07,180 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 17:07:54] 2025-10-10 22:07:07,180 | INFO     | log transfer has been attempted: DONE
[2025-10-10 17:07:54] 2025-10-10 22:07:07,180 | INFO     | job 6837376994 has finished - writing final server update
[2025-10-10 17:07:54] 2025-10-10 22:07:07,180 | INFO     | total number of processed events: 400 (read)
[2025-10-10 17:07:54] 2025-10-10 22:07:07,182 | INFO     | executing command: lscpu
[2025-10-10 17:07:54] 2025-10-10 22:07:07,231 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 17:07:54] 2025-10-10 22:07:07,927 | INFO     | time since job start (3203s) is within the limit (172800.0s)
[2025-10-10 17:07:54] 2025-10-10 22:07:09,444 | INFO     | monitor loop #239: job 0:6837376994 is in state 'finished'
[2025-10-10 17:07:54] 2025-10-10 22:07:09,444 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 17:07:54] 2025-10-10 22:07:09,932 | INFO     | time since job start (3205s) is within the limit (172800.0s)
[2025-10-10 17:07:54] 2025-10-10 22:07:10,666 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 17:07:54] 2025-10-10 22:07:10,677 | INFO     | found 44 cores (22 cores per socket, 2 sockets) HT, CPU MHz: 2070.783375000001
[2025-10-10 17:07:54] 2025-10-10 22:07:10,695 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6837376994/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 17:07:54] 2025-10-10 22:07:10,696 | INFO     | extracted standard info from prmon json
[2025-10-10 17:07:54] 2025-10-10 22:07:10,697 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 17:07:54] 2025-10-10 22:07:10,697 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 17:07:54] 2025-10-10 22:07:10,697 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 17:07:54] 2025-10-10 22:07:10,697 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 17:07:54] 2025-10-10 22:07:10,699 | INFO     | fitting pss+swap vs Time
[2025-10-10 17:07:54] 2025-10-10 22:07:10,699 | INFO     | sum of square deviations: 28242390.0
[2025-10-10 17:07:54] 2025-10-10 22:07:10,700 | INFO     | sum of deviations: -774705733.9999999
[2025-10-10 17:07:54] 2025-10-10 22:07:10,700 | INFO     | mean x: 1760132499.0
[2025-10-10 17:07:54] 2025-10-10 22:07:10,700 | INFO     | mean y: 2806398.933333333
[2025-10-10 17:07:54] 2025-10-10 22:07:10,700 | INFO     | -- intersect: 48284298849.644806
[2025-10-10 17:07:54] 2025-10-10 22:07:10,700 | INFO     | intersect: 48284298849.644806
[2025-10-10 17:07:54] 2025-10-10 22:07:10,700 | INFO     | chi2: 0.003113548779993259
[2025-10-10 17:07:54] 2025-10-10 22:07:10,701 | INFO     | -- intersect: 48284298849.644806
[2025-10-10 17:07:54] 2025-10-10 22:07:10,701 | INFO     | current memory leak: -27.43 B/s (using 45 data points, chi2=0.00)
[2025-10-10 17:07:54] 2025-10-10 22:07:10,701 | INFO     | could have reported an average CPU frequency of 2060 MHz (5 samples)
[2025-10-10 17:07:54] 2025-10-10 22:07:10,701 | INFO     | ..............................
[2025-10-10 17:07:54] 2025-10-10 22:07:10,701 | INFO     | . Timing measurements:
[2025-10-10 17:07:54] 2025-10-10 22:07:10,701 | INFO     | . get job = 0 s
[2025-10-10 17:07:54] 2025-10-10 22:07:10,701 | INFO     | . initial setup = 19 s
[2025-10-10 17:07:54] 2025-10-10 22:07:10,702 | INFO     | . payload setup = 5 s
[2025-10-10 17:07:54] 2025-10-10 22:07:10,702 | INFO     | . stage-in = 0 s
[2025-10-10 17:07:54] 2025-10-10 22:07:10,702 | INFO     | . payload execution = 3174 s
[2025-10-10 17:07:54] 2025-10-10 22:07:10,702 | INFO     | . stage-out = 0 s
[2025-10-10 17:07:54] 2025-10-10 22:07:10,702 | INFO     | . log creation = 0 s
[2025-10-10 17:07:54] 2025-10-10 22:07:10,702 | INFO     | ..............................
[2025-10-10 17:07:54] 2025-10-10 22:07:11,021 | INFO     | 
[2025-10-10 17:07:54] 2025-10-10 22:07:11,021 | INFO     | job summary report
[2025-10-10 17:07:54] 2025-10-10 22:07:11,021 | INFO     | --------------------------------------------------
[2025-10-10 17:07:54] 2025-10-10 22:07:11,021 | INFO     | PanDA job id: 6837376994
[2025-10-10 17:07:54] 2025-10-10 22:07:11,021 | INFO     | task id: 46676269
[2025-10-10 17:07:54] 2025-10-10 22:07:11,021 | INFO     | errors: (none)
[2025-10-10 17:07:54] 2025-10-10 22:07:11,022 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 17:07:54] 2025-10-10 22:07:11,022 | INFO     | pilot state: finished 
[2025-10-10 17:07:54] 2025-10-10 22:07:11,022 | INFO     | transexitcode: 0
[2025-10-10 17:07:54] 2025-10-10 22:07:11,022 | INFO     | exeerrorcode: 0
[2025-10-10 17:07:54] 2025-10-10 22:07:11,022 | INFO     | exeerrordiag: 
[2025-10-10 17:07:54] 2025-10-10 22:07:11,022 | INFO     | exitcode: 0
[2025-10-10 17:07:54] 2025-10-10 22:07:11,022 | INFO     | exitmsg: OK
[2025-10-10 17:07:54] 2025-10-10 22:07:11,022 | INFO     | cpuconsumptiontime: 32968 s
[2025-10-10 17:07:54] 2025-10-10 22:07:11,022 | INFO     | nevents: 400
[2025-10-10 17:07:54] 2025-10-10 22:07:11,022 | INFO     | neventsw: 0
[2025-10-10 17:07:54] 2025-10-10 22:07:11,023 | INFO     | pid: 67372
[2025-10-10 17:07:54] 2025-10-10 22:07:11,023 | INFO     | pgrp: 67372
[2025-10-10 17:07:54] 2025-10-10 22:07:11,023 | INFO     | corecount: 12
[2025-10-10 17:07:54] 2025-10-10 22:07:11,023 | INFO     | event service: False
[2025-10-10 17:07:54] 2025-10-10 22:07:11,023 | INFO     | sizes: {0: 2348862, 4: 2349124, 11: 2349152, 3183: 2374461, 3184: 2383473, 3185: 2383529, 3191: 2383883}
[2025-10-10 17:07:54] 2025-10-10 22:07:11,023 | INFO     | --------------------------------------------------
[2025-10-10 17:07:54] 2025-10-10 22:07:11,023 | INFO     | 
[2025-10-10 17:07:54] 2025-10-10 22:07:11,023 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-10 17:07:54] 2025-10-10 22:07:11,044 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 17:07:54] 2025-10-10 22:07:11,044 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 17:07:54] 2025-10-10 22:07:11,045 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 17:07:54] 2025-10-10 22:07:11,045 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 17:07:54] 2025-10-10 22:07:11,045 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 17:07:54] 2025-10-10 22:07:11,045 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 17:07:54] 2025-10-10 22:07:11,045 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 17:07:54] 2025-10-10 22:07:11,045 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 17:07:54] 2025-10-10 22:07:11,045 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 17:07:54] 2025-10-10 22:07:11,045 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 17:07:54] 2025-10-10 22:07:11,046 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 17:07:54] 2025-10-10 22:07:11,046 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 17:07:54] 2025-10-10 22:07:11,046 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 17:07:54] 2025-10-10 22:07:11,046 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 17:07:54] 2025-10-10 22:07:11,046 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 17:07:54] 2025-10-10 22:07:11,046 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 17:07:54] 2025-10-10 22:07:11,046 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 17:07:54] 2025-10-10 22:07:11,046 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 17:07:54] 2025-10-10 22:07:11,047 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 17:07:54] 2025-10-10 22:07:11,047 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 17:07:54] 2025-10-10 22:07:11,047 | INFO     | job 6837376994 has completed (purged errors)
[2025-10-10 17:07:54] 2025-10-10 22:07:11,047 | INFO     | overall cleanup function is called
[2025-10-10 17:07:54] 2025-10-10 22:07:12,056 | INFO     | --- collectZombieJob: --- 10, [67372]
[2025-10-10 17:07:54] 2025-10-10 22:07:12,056 | INFO     | zombie collector waiting for pid 67372
[2025-10-10 17:07:54] 2025-10-10 22:07:12,056 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 17:07:54] 2025-10-10 22:07:12,056 | INFO     | collected zombie processes
[2025-10-10 17:07:54] 2025-10-10 22:07:12,056 | INFO     | will attempt to kill all subprocesses of pid=67372
[2025-10-10 17:07:54] 2025-10-10 22:07:12,343 | INFO     | process IDs to be killed: [67372] (in reverse order)
[2025-10-10 17:07:54] 2025-10-10 22:07:12,435 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 17:07:54] 2025-10-10 22:07:12,436 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 17:07:54] 2025-10-10 22:07:12,447 | INFO     | did not find any defunct processes belonging to 67372
[2025-10-10 17:07:54] 2025-10-10 22:07:12,457 | INFO     | did not find any defunct processes belonging to 67372
[2025-10-10 17:07:54] 2025-10-10 22:07:12,458 | INFO     | ready for new job
[2025-10-10 17:07:54] 2025-10-10 22:07:12,458 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 17:07:54] 2025-10-10 22:07:12,460 | INFO     | ***************************************
[2025-10-10 17:07:54] 2025-10-10 22:07:12,460 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 17:07:54] 2025-10-10 22:07:12,460 | INFO     | ***************************************
[2025-10-10 17:07:54] 2025-10-10 22:07:12,460 | INFO     | 
[2025-10-10 17:07:54] 2025-10-10 22:07:12,465 | INFO     | architecture information:
[2025-10-10 17:07:54] 2025-10-10 22:07:12,466 | INFO     | executing command: cat /etc/os-release
[2025-10-10 17:07:54] 2025-10-10 22:07:12,478 | INFO     | cat /etc/os-release:
[2025-10-10 17:07:54] NAME="CentOS Linux"
[2025-10-10 17:07:54] VERSION="7 (Core)"
[2025-10-10 17:07:54] ID="centos"
[2025-10-10 17:07:54] ID_LIKE="rhel fedora"
[2025-10-10 17:07:54] VERSION_ID="7"
[2025-10-10 17:07:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 17:07:54] ANSI_COLOR="0;31"
[2025-10-10 17:07:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 17:07:54] HOME_URL="https://www.centos.org/"
[2025-10-10 17:07:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 17:07:54] 
[2025-10-10 17:07:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 17:07:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 17:07:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 17:07:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 17:07:54] 
[2025-10-10 17:07:54] 2025-10-10 22:07:12,479 | INFO     | ***************************************
[2025-10-10 17:07:54] 2025-10-10 22:07:12,982 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-10 17:07:54] 2025-10-10 22:07:12,998 | INFO     | sufficient remaining disk space (1813233270784 B)
[2025-10-10 17:07:54] 2025-10-10 22:07:12,998 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 17:07:54] 2025-10-10 22:07:12,998 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 17:07:54] 2025-10-10 22:07:12,998 | INFO     | update_server=False
[2025-10-10 17:07:54] 2025-10-10 22:07:12,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 17:07:54] 2025-10-10 22:07:12,999 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 17:07:54] 2025-10-10 22:07:12,999 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 17:07:54] 2025-10-10 22:07:13,000 | INFO     | aborting loop
[2025-10-10 17:07:54] 2025-10-10 22:07:13,175 | INFO     | all data control threads have been joined
[2025-10-10 17:07:54] 2025-10-10 22:07:14,004 | INFO     | [job] retrieve thread has finished
[2025-10-10 17:07:54] 2025-10-10 22:07:14,005 | INFO     | [job] job monitor thread has finished
[2025-10-10 17:07:54] 2025-10-10 22:07:14,048 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 17:07:54] 2025-10-10 22:07:14,073 | INFO     | all payload control threads have been joined
[2025-10-10 17:07:54] 2025-10-10 22:07:14,074 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 17:07:54] 2025-10-10 22:07:14,181 | INFO     | [data] control thread has finished
[2025-10-10 17:07:54] 2025-10-10 22:07:14,245 | INFO     | [payload] failed_post thread has finished
[2025-10-10 17:07:54] 2025-10-10 22:07:14,335 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 17:07:54] 2025-10-10 22:07:14,387 | INFO     | all job control threads have been joined
[2025-10-10 17:07:54] 2025-10-10 22:07:14,651 | INFO     | [data] copytool_in thread has finished
[2025-10-10 17:07:54] 2025-10-10 22:07:14,860 | INFO     | [payload] validate_post thread has finished
[2025-10-10 17:07:54] 2025-10-10 22:07:15,005 | INFO     | [data] copytool_out thread has finished
[2025-10-10 17:07:54] 2025-10-10 22:07:15,076 | INFO     | [payload] control thread has finished
[2025-10-10 17:07:54] 2025-10-10 22:07:15,116 | INFO     | [job] validate thread has finished
[2025-10-10 17:07:54] 2025-10-10 22:07:15,117 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 17:07:54] 2025-10-10 22:07:15,392 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 17:07:54] 2025-10-10 22:07:15,393 | INFO     | [job] control thread has finished
[2025-10-10 17:07:54] 2025-10-10 22:07:15,776 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 17:07:54] 2025-10-10 22:07:16,781 | INFO     | [job] queue monitor thread has finished
[2025-10-10 17:07:54] 2025-10-10 22:07:19,122 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 17:07:54] 2025-10-10 22:07:43,473 | INFO     | PID=60340 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 17:07:54] 2025-10-10 22:07:43,473 | INFO     | .. there are 5 such processes running
[2025-10-10 17:07:54] 2025-10-10 22:07:43,474 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 17:07:54] 2025-10-10 22:07:43,474 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 17:07:54] 2025-10-10 22:07:43,474 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 17:07:54] 2025-10-10 22:07:48,433 | INFO     | [monitor] cgroup control has ended
[2025-10-10 17:07:54] 2025-10-10 22:07:49,032 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139968235272000)>', '<ExcThread(monitor, started 139967456069376)>']
[2025-10-10 17:07:54] 2025-10-10 22:07:49,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 17:07:54] 2025-10-10 22:07:49,501 | INFO     | [monitor] control thread has ended
[2025-10-10 17:07:54] 2025-10-10 22:07:54,034 | INFO     | all workflow threads have been joined
[2025-10-10 17:07:54] 2025-10-10 22:07:54,034 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 17:07:54] 2025-10-10 22:07:54,034 | INFO     | traces error code: 0
[2025-10-10 17:07:54] 2025-10-10 22:07:54,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 17:07:54] 2025-10-10 22:07:54,137 [wrapper] ==== pilot stdout END ====
[2025-10-10 17:07:54] 2025-10-10 22:07:54,140 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 17:07:54] 2025-10-10 22:07:54,143 [wrapper] pilotpid: 60340
[2025-10-10 17:07:54] 2025-10-10 22:07:54,146 [wrapper] Pilot exit status: 0
[2025-10-10 17:07:54] 2025-10-10 22:07:54,157 [wrapper] pandaids: 6837376994
[2025-10-10 17:07:54] 2025-10-10 22:07:54,206 [wrapper] cleanup supervisor_pilot  155426 60341
[2025-10-10 17:07:54] 2025-10-10 22:07:54,209 [wrapper] Test setup, not cleaning
[2025-10-10 17:07:54] 2025-10-10 22:07:54,212 [wrapper] apfmon messages muted
[2025-10-10 17:07:54] 2025-10-10 22:07:54,214 [wrapper] ==== wrapper stdout END ====
[2025-10-10 17:07:54] 2025-10-10 22:07:54,217 [wrapper] ==== wrapper stderr END ====
[2025-10-10 17:07:54]  *** Error codes and diagnostics ***
[2025-10-10 17:07:54]     "exeErrorCode": 0,
[2025-10-10 17:07:54]     "exeErrorDiag": "",
[2025-10-10 17:07:54]     "pilotErrorCode": 0,
[2025-10-10 17:07:54]     "pilotErrorDiag": "",
[2025-10-10 17:07:54]  *** Listing of results directory ***
[2025-10-10 17:07:54] total 404656
[2025-10-10 17:07:54] -rw-r--r-- 1 mark mark    557409 Oct  9 19:12 pilot3.tar.gz
[2025-10-10 17:07:54] -rwx------ 1 mark mark     36292 Oct  9 19:18 runpilot2-wrapper.sh
[2025-10-10 17:07:54] -rw-r--r-- 1 mark mark      5112 Oct  9 19:18 queuedata.json
[2025-10-10 17:07:54] -rw-rw-r-- 1 mark mark       100 Oct 10 16:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 17:07:54] -rwxr-xr-x 1 mark mark      7986 Oct 10 16:13 run_atlas
[2025-10-10 17:07:54] -rw-rw-r-- 1 mark mark       105 Oct 10 16:13 job.xml
[2025-10-10 17:07:54] -rw-r--r-- 2 mark mark 220516402 Oct 10 16:13 EVNT.46676267._001017.pool.root.1
[2025-10-10 17:07:54] -rw-r--r-- 2 mark mark     15120 Oct 10 16:13 start_atlas.sh
[2025-10-10 17:07:54] drwxrwx--x 2 mark mark      4096 Oct 10 16:13 shared
[2025-10-10 17:07:54] -rw-r--r-- 2 mark mark    569677 Oct 10 16:13 input.tar.gz
[2025-10-10 17:07:54] -rw-rw-r-- 1 mark mark      9229 Oct 10 16:13 init_data.xml
[2025-10-10 17:07:54] -rw-rw-r-- 1 mark mark         0 Oct 10 16:13 boinc_setup_complete
[2025-10-10 17:07:54] -rw-rw-r-- 1 mark mark         0 Oct 10 16:13 boinc_lockfile
[2025-10-10 17:07:54] -rw-rw-r-- 1 mark mark      2549 Oct 10 16:13 pandaJob.out
[2025-10-10 17:07:54] -rw------- 1 mark mark    975533 Oct 10 16:13 agis_schedconf.cvmfs.json
[2025-10-10 17:07:54] -rw------- 1 mark mark   1560580 Oct 10 16:13 agis_ddmendpoints.agis.ALL.json
[2025-10-10 17:07:54] drwx------ 5 mark mark      4096 Oct 10 16:13 pilot3
[2025-10-10 17:07:54] -rw------- 1 mark mark 188219656 Oct 10 17:06 HITS.46676269._028756.pool.root.1
[2025-10-10 17:07:54] -rw-rw-r-- 1 mark mark       529 Oct 10 17:06 boinc_task_state.xml
[2025-10-10 17:07:54] -rw------- 1 mark mark      1045 Oct 10 17:06 memory_monitor_summary.json
[2025-10-10 17:07:54] -rw------- 1 mark mark    371418 Oct 10 17:07 log.46676269._028756.job.log.tgz.1
[2025-10-10 17:07:54] -rw------- 1 mark mark      7783 Oct 10 17:07 heartbeat.json
[2025-10-10 17:07:54] -rw-rw-r-- 1 mark mark      8192 Oct 10 17:07 boinc_mmap_file
[2025-10-10 17:07:54] -rw-rw-r-- 1 mark mark        27 Oct 10 17:07 wrapper_checkpoint.txt
[2025-10-10 17:07:54] -rw------- 1 mark mark        95 Oct 10 17:07 pilot_heartbeat.json
[2025-10-10 17:07:54] -rw------- 1 mark mark      4830 Oct 10 17:07 pilotlog.txt
[2025-10-10 17:07:54] -rw------- 1 mark mark    486714 Oct 10 17:07 log.46676269._028756.job.log.1
[2025-10-10 17:07:54] -rw------- 1 mark mark       357 Oct 10 17:07 output.list
[2025-10-10 17:07:54] -rw-rw-r-- 1 mark mark       620 Oct 10 17:07 runtime_log
[2025-10-10 17:07:54] -rw------- 1 mark mark    880640 Oct 10 17:07 result.tar.gz
[2025-10-10 17:07:54] -rw-rw-r-- 1 mark mark      8759 Oct 10 17:07 runtime_log.err
[2025-10-10 17:07:54] -rw------- 1 mark mark       645 Oct 10 17:07 aZ2MDmc1FR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIkbNDmXUnrcn.diag
[2025-10-10 17:07:54] -rw-rw-r-- 1 mark mark     22100 Oct 10 17:07 stderr.txt
[2025-10-10 17:07:54] HITS file was successfully produced:
[2025-10-10 17:07:54] -rw------- 1 mark mark 188219656 Oct 10 17:06 shared/HITS.pool.root.1
[2025-10-10 17:07:54]  *** Contents of shared directory: ***
[2025-10-10 17:07:54] total 400608
[2025-10-10 17:07:54] -rw-r--r-- 2 mark mark 220516402 Oct 10 16:13 ATLAS.root_0
[2025-10-10 17:07:54] -rw-r--r-- 2 mark mark     15120 Oct 10 16:13 start_atlas.sh
[2025-10-10 17:07:54] -rw-r--r-- 2 mark mark    569677 Oct 10 16:13 input.tar.gz
[2025-10-10 17:07:54] -rw------- 1 mark mark 188219656 Oct 10 17:06 HITS.pool.root.1
[2025-10-10 17:07:54] -rw------- 1 mark mark    880640 Oct 10 17:07 result.tar.gz
17:07:56 (54080): run_atlas exited; CPU time 33103.162370
17:07:56 (54080): called boinc_finish(0)

</stderr_txt>
]]>

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