Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:47:37 (987995): wrapper (7.7.26015): starting
11:47:37 (987995): wrapper: running run_atlas (--nthreads 10)
[2025-10-10 11:47:37] Arguments: --nthreads 10
[2025-10-10 11:47:37] Threads: 10
[2025-10-10 11:47:37] Checking for CVMFS
[2025-10-10 11:47:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 11:47:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 11:47:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 11:47:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 11:47:37] 2.13.2.0 3269412 33046 349296 151553 3 377 27114656 40960001 45532 16776704 0 412076487 99.837 175807060 37049 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 11:47:37] CVMFS is ok
[2025-10-10 11:47:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 11:47:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 11:47:37] Further information can be found at the LHC@home message board.
[2025-10-10 11:47:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 11:47:37] Checking for apptainer binary...
[2025-10-10 11:47:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 11:47:37] Running /usr/bin/apptainer --version
[2025-10-10 11:47:37] apptainer version 1.4.3-1.el9
[2025-10-10 11:47:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 11:47:38] c8-16-2.aglt2.org
[2025-10-10 11:47:38] apptainer works
[2025-10-10 11:47:38] Set ATHENA_PROC_NUMBER=10
[2025-10-10 11:47:38] Set ATHENA_CORE_NUMBER=10
[2025-10-10 11:47:38] Starting ATLAS job with PandaID=6837510019
[2025-10-10 11:47:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 12:42:01]  *** The last 200 lines of the pilot log: ***
[2025-10-10 12:42:01] 2025-10-10 16:40:29,758 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 12:42:01] 2025-10-10 16:40:29,813 | INFO     | time since job start (3160s) is within the limit (172800.0s)
[2025-10-10 12:42:01] 2025-10-10 16:40:31,626 | INFO     | number of running child processes to parent process 1029117: 1
[2025-10-10 12:42:01] 2025-10-10 16:40:31,626 | INFO     | maximum number of monitored processes: 6
[2025-10-10 12:42:01] 2025-10-10 16:40:31,831 | INFO     | time since job start (3162s) is within the limit (172800.0s)
[2025-10-10 12:42:01] 2025-10-10 16:40:33,854 | INFO     | time since job start (3164s) is within the limit (172800.0s)
[2025-10-10 12:42:01] 2025-10-10 16:40:34,144 | INFO     | monitor loop #193: job 0:6837510019 is in state 'finished'
[2025-10-10 12:42:01] 2025-10-10 16:40:34,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:42:01] 2025-10-10 16:40:35,860 | INFO     | time since job start (3166s) is within the limit (172800.0s)
[2025-10-10 12:42:01] 2025-10-10 16:40:36,662 | INFO     | monitor loop #194: job 0:6837510019 is in state 'finished'
[2025-10-10 12:42:01] 2025-10-10 16:40:36,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:42:01] 2025-10-10 16:40:37,873 | INFO     | time since job start (3168s) is within the limit (172800.0s)
[2025-10-10 12:42:01] 2025-10-10 16:40:39,168 | INFO     | monitor loop #195: job 0:6837510019 is in state 'finished'
[2025-10-10 12:42:01] 2025-10-10 16:40:39,168 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:42:01] 2025-10-10 16:40:39,880 | INFO     | time since job start (3170s) is within the limit (172800.0s)
[2025-10-10 12:42:01] 2025-10-10 16:40:41,677 | INFO     | monitor loop #196: job 0:6837510019 is in state 'finished'
[2025-10-10 12:42:01] 2025-10-10 16:40:41,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:42:01] 2025-10-10 16:40:41,887 | INFO     | time since job start (3172s) is within the limit (172800.0s)
[2025-10-10 12:42:01] 2025-10-10 16:40:44,190 | INFO     | monitor loop #197: job 0:6837510019 is in state 'finished'
[2025-10-10 12:42:01] 2025-10-10 16:40:44,190 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:42:01] 2025-10-10 16:40:44,542 | INFO     | PID=1004489 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-10 12:42:01] 2025-10-10 16:40:44,543 | INFO     | .. there are 74 such processes running
[2025-10-10 12:42:01] 2025-10-10 16:40:45,544 | INFO     | time since job start (3176s) is within the limit (172800.0s)
[2025-10-10 12:42:01] 2025-10-10 16:40:46,695 | INFO     | monitor loop #198: job 0:6837510019 is in state 'finished'
[2025-10-10 12:42:01] 2025-10-10 16:40:46,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:42:01] 2025-10-10 16:40:47,551 | INFO     | time since job start (3178s) is within the limit (172800.0s)
[2025-10-10 12:42:01] 2025-10-10 16:40:49,200 | INFO     | monitor loop #199: job 0:6837510019 is in state 'finished'
[2025-10-10 12:42:01] 2025-10-10 16:40:49,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:42:01] 2025-10-10 16:40:49,586 | INFO     | time since job start (3180s) is within the limit (172800.0s)
[2025-10-10 12:42:01] 2025-10-10 16:40:51,593 | INFO     | time since job start (3182s) is within the limit (172800.0s)
[2025-10-10 12:42:01] 2025-10-10 16:40:51,723 | INFO     | monitor loop #200: job 0:6837510019 is in state 'finished'
[2025-10-10 12:42:01] 2025-10-10 16:40:51,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:42:01] 2025-10-10 16:40:53,614 | INFO     | time since job start (3184s) is within the limit (172800.0s)
[2025-10-10 12:42:01] 2025-10-10 16:40:54,239 | INFO     | monitor loop #201: job 0:6837510019 is in state 'finished'
[2025-10-10 12:42:01] 2025-10-10 16:40:54,239 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:42:01] 2025-10-10 16:40:54,485 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 12:42:01] 2025-10-10 16:40:54,491 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.989984374996
[2025-10-10 12:42:01] 2025-10-10 16:40:54,504 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6837510019/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 12:42:01] 2025-10-10 16:40:54,505 | INFO     | extracted standard info from prmon json
[2025-10-10 12:42:01] 2025-10-10 16:40:54,505 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 12:42:01] 2025-10-10 16:40:54,505 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 12:42:01] 2025-10-10 16:40:54,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 12:42:01] 2025-10-10 16:40:54,505 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 12:42:01] 2025-10-10 16:40:54,506 | INFO     | fitting pss+swap vs Time
[2025-10-10 12:42:01] 2025-10-10 16:40:54,506 | INFO     | sum of square deviations: 28247517.911111105
[2025-10-10 12:42:01] 2025-10-10 16:40:54,506 | INFO     | sum of deviations: -164434148.6888889
[2025-10-10 12:42:01] 2025-10-10 16:40:54,506 | INFO     | mean x: 1760112945.0444446
[2025-10-10 12:42:01] 2025-10-10 16:40:54,506 | INFO     | mean y: 2257538.8444444444
[2025-10-10 12:42:01] 2025-10-10 16:40:54,506 | INFO     | -- intersect: 10248208160.963795
[2025-10-10 12:42:01] 2025-10-10 16:40:54,506 | INFO     | intersect: 10248208160.963795
[2025-10-10 12:42:01] 2025-10-10 16:40:54,506 | INFO     | chi2: 0.01484293484884725
[2025-10-10 12:42:01] 2025-10-10 16:40:54,506 | INFO     | -- intersect: 10248208160.963795
[2025-10-10 12:42:01] 2025-10-10 16:40:54,506 | INFO     | current memory leak: -5.82 B/s (using 45 data points, chi2=0.01)
[2025-10-10 12:42:01] 2025-10-10 16:40:54,507 | INFO     | could have reported an average CPU frequency of 3773 MHz (5 samples)
[2025-10-10 12:42:01] 2025-10-10 16:40:54,507 | INFO     | ..............................
[2025-10-10 12:42:01] 2025-10-10 16:40:54,507 | INFO     | . Timing measurements:
[2025-10-10 12:42:01] 2025-10-10 16:40:54,507 | INFO     | . get job = 0 s
[2025-10-10 12:42:01] 2025-10-10 16:40:54,507 | INFO     | . initial setup = 2 s
[2025-10-10 12:42:01] 2025-10-10 16:40:54,507 | INFO     | . payload setup = 6 s
[2025-10-10 12:42:01] 2025-10-10 16:40:54,507 | INFO     | . stage-in = 0 s
[2025-10-10 12:42:01] 2025-10-10 16:40:54,508 | INFO     | . payload execution = 3128 s
[2025-10-10 12:42:01] 2025-10-10 16:40:54,508 | INFO     | . stage-out = 2 s
[2025-10-10 12:42:01] 2025-10-10 16:40:54,508 | INFO     | . log creation = 0 s
[2025-10-10 12:42:01] 2025-10-10 16:40:54,509 | INFO     | ..............................
[2025-10-10 12:42:01] 2025-10-10 16:40:54,567 | INFO     | 
[2025-10-10 12:42:01] 2025-10-10 16:40:54,567 | INFO     | job summary report
[2025-10-10 12:42:01] 2025-10-10 16:40:54,567 | INFO     | --------------------------------------------------
[2025-10-10 12:42:01] 2025-10-10 16:40:54,567 | INFO     | PanDA job id: 6837510019
[2025-10-10 12:42:01] 2025-10-10 16:40:54,567 | INFO     | task id: 46676269
[2025-10-10 12:42:01] 2025-10-10 16:40:54,567 | INFO     | errors: (none)
[2025-10-10 12:42:01] 2025-10-10 16:40:54,567 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 12:42:01] 2025-10-10 16:40:54,567 | INFO     | pilot state: finished 
[2025-10-10 12:42:01] 2025-10-10 16:40:54,567 | INFO     | transexitcode: 0
[2025-10-10 12:42:01] 2025-10-10 16:40:54,567 | INFO     | exeerrorcode: 0
[2025-10-10 12:42:01] 2025-10-10 16:40:54,567 | INFO     | exeerrordiag: 
[2025-10-10 12:42:01] 2025-10-10 16:40:54,567 | INFO     | exitcode: 0
[2025-10-10 12:42:01] 2025-10-10 16:40:54,567 | INFO     | exitmsg: OK
[2025-10-10 12:42:01] 2025-10-10 16:40:54,567 | INFO     | cpuconsumptiontime: 22049 s
[2025-10-10 12:42:01] 2025-10-10 16:40:54,567 | INFO     | nevents: 400
[2025-10-10 12:42:01] 2025-10-10 16:40:54,568 | INFO     | neventsw: 0
[2025-10-10 12:42:01] 2025-10-10 16:40:54,568 | INFO     | pid: 1029117
[2025-10-10 12:42:01] 2025-10-10 16:40:54,568 | INFO     | pgrp: 1029117
[2025-10-10 12:42:01] 2025-10-10 16:40:54,568 | INFO     | corecount: 10
[2025-10-10 12:42:01] 2025-10-10 16:40:54,568 | INFO     | event service: False
[2025-10-10 12:42:01] 2025-10-10 16:40:54,568 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 3139: 2374675, 3142: 2383673, 3144: 2383729, 3169: 2384083}
[2025-10-10 12:42:01] 2025-10-10 16:40:54,568 | INFO     | --------------------------------------------------
[2025-10-10 12:42:01] 2025-10-10 16:40:54,568 | INFO     | 
[2025-10-10 12:42:01] 2025-10-10 16:40:54,568 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-10-10 12:42:01] 2025-10-10 16:40:54,658 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 12:42:01] 2025-10-10 16:40:54,658 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 12:42:01] 2025-10-10 16:40:54,658 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 12:42:01] 2025-10-10 16:40:54,658 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 12:42:01] 2025-10-10 16:40:54,658 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 12:42:01] 2025-10-10 16:40:54,658 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 12:42:01] 2025-10-10 16:40:54,658 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 12:42:01] 2025-10-10 16:40:54,659 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 12:42:01] 2025-10-10 16:40:54,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 12:42:01] 2025-10-10 16:40:54,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 12:42:01] 2025-10-10 16:40:54,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 12:42:01] 2025-10-10 16:40:54,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 12:42:01] 2025-10-10 16:40:54,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 12:42:01] 2025-10-10 16:40:54,659 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 12:42:01] 2025-10-10 16:40:54,659 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 12:42:01] 2025-10-10 16:40:54,659 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 12:42:01] 2025-10-10 16:40:54,659 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 12:42:01] 2025-10-10 16:40:54,659 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 12:42:01] 2025-10-10 16:40:54,659 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 12:42:01] 2025-10-10 16:40:54,659 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 12:42:01] 2025-10-10 16:40:54,659 | INFO     | job 6837510019 has completed (purged errors)
[2025-10-10 12:42:01] 2025-10-10 16:40:54,659 | INFO     | overall cleanup function is called
[2025-10-10 12:42:01] 2025-10-10 16:40:55,669 | INFO     | --- collectZombieJob: --- 10, [1029117]
[2025-10-10 12:42:01] 2025-10-10 16:40:55,669 | INFO     | zombie collector waiting for pid 1029117
[2025-10-10 12:42:01] 2025-10-10 16:40:55,669 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 12:42:01] 2025-10-10 16:40:55,669 | INFO     | collected zombie processes
[2025-10-10 12:42:01] 2025-10-10 16:40:55,669 | INFO     | will attempt to kill all subprocesses of pid=1029117
[2025-10-10 12:42:01] 2025-10-10 16:40:57,018 | INFO     | process IDs to be killed: [1029117] (in reverse order)
[2025-10-10 12:42:01] 2025-10-10 16:40:57,355 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 12:42:01] 2025-10-10 16:40:57,360 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 12:42:01] 2025-10-10 16:40:57,422 | INFO     | did not find any defunct processes belonging to 1029117
[2025-10-10 12:42:01] 2025-10-10 16:40:57,502 | INFO     | did not find any defunct processes belonging to 1029117
[2025-10-10 12:42:01] 2025-10-10 16:40:57,502 | INFO     | ready for new job
[2025-10-10 12:42:01] 2025-10-10 16:40:57,503 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 12:42:01] 2025-10-10 16:40:57,504 | INFO     | ***************************************
[2025-10-10 12:42:01] 2025-10-10 16:40:57,504 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 12:42:01] 2025-10-10 16:40:57,504 | INFO     | ***************************************
[2025-10-10 12:42:01] 2025-10-10 16:40:57,504 | INFO     | 
[2025-10-10 12:42:01] 2025-10-10 16:40:57,561 | INFO     | architecture information:
[2025-10-10 12:42:01] 2025-10-10 16:40:57,566 | INFO     | executing command: cat /etc/os-release
[2025-10-10 12:42:01] 2025-10-10 16:40:57,613 | INFO     | cat /etc/os-release:
[2025-10-10 12:42:01] NAME="CentOS Linux"
[2025-10-10 12:42:01] VERSION="7 (Core)"
[2025-10-10 12:42:01] ID="centos"
[2025-10-10 12:42:01] ID_LIKE="rhel fedora"
[2025-10-10 12:42:01] VERSION_ID="7"
[2025-10-10 12:42:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 12:42:01] ANSI_COLOR="0;31"
[2025-10-10 12:42:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 12:42:01] HOME_URL="https://www.centos.org/"
[2025-10-10 12:42:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 12:42:01] 
[2025-10-10 12:42:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 12:42:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 12:42:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 12:42:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 12:42:01] 
[2025-10-10 12:42:01] 2025-10-10 16:40:57,613 | INFO     | ***************************************
[2025-10-10 12:42:01] 2025-10-10 16:40:58,118 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-10-10 12:42:01] 2025-10-10 16:40:58,154 | INFO     | sufficient remaining disk space (168275476480 B)
[2025-10-10 12:42:01] 2025-10-10 16:40:58,154 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 12:42:01] 2025-10-10 16:40:58,154 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 12:42:01] 2025-10-10 16:40:58,154 | INFO     | update_server=False
[2025-10-10 12:42:01] 2025-10-10 16:40:58,154 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 12:42:01] 2025-10-10 16:40:58,155 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:42:01] 2025-10-10 16:40:58,155 | INFO     | aborting loop
[2025-10-10 12:42:01] 2025-10-10 16:40:58,184 | INFO     | all job control threads have been joined
[2025-10-10 12:42:01] 2025-10-10 16:40:58,261 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 12:42:01] 2025-10-10 16:40:58,662 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 12:42:01] 2025-10-10 16:40:59,075 | INFO     | all data control threads have been joined
[2025-10-10 12:42:01] 2025-10-10 16:40:59,148 | INFO     | all payload control threads have been joined
[2025-10-10 12:42:01] 2025-10-10 16:40:59,160 | INFO     | [job] retrieve thread has finished
[2025-10-10 12:42:01] 2025-10-10 16:40:59,163 | INFO     | [job] job monitor thread has finished
[2025-10-10 12:42:01] 2025-10-10 16:40:59,193 | INFO     | [job] control thread has finished
[2025-10-10 12:42:01] 2025-10-10 16:40:59,221 | INFO     | [data] copytool_in thread has finished
[2025-10-10 12:42:01] 2025-10-10 16:40:59,221 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 12:42:01] 2025-10-10 16:40:59,582 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:42:01] 2025-10-10 16:40:59,992 | INFO     | [job] validate thread has finished
[2025-10-10 12:42:01] 2025-10-10 16:41:00,081 | INFO     | [data] control thread has finished
[2025-10-10 12:42:01] 2025-10-10 16:41:00,154 | INFO     | [payload] control thread has finished
[2025-10-10 12:42:01] 2025-10-10 16:41:00,493 | INFO     | [payload] failed_post thread has finished
[2025-10-10 12:42:01] 2025-10-10 16:41:00,562 | INFO     | [payload] validate_post thread has finished
[2025-10-10 12:42:01] 2025-10-10 16:41:00,588 | INFO     | [job] queue monitor thread has finished
[2025-10-10 12:42:01] 2025-10-10 16:41:00,638 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 12:42:01] 2025-10-10 16:41:00,657 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 12:42:01] 2025-10-10 16:41:00,676 | INFO     | [data] copytool_out thread has finished
[2025-10-10 12:42:01] 2025-10-10 16:41:02,271 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 12:42:01] 2025-10-10 16:41:08,572 | INFO     | job.realtimelogging is not enabled
[2025-10-10 12:42:01] 2025-10-10 16:41:09,578 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 12:42:01] 2025-10-10 16:41:28,437 | INFO     | PID=1004489 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 12:42:01] 2025-10-10 16:41:28,438 | INFO     | .. there are 74 such processes running
[2025-10-10 12:42:01] 2025-10-10 16:41:28,441 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 12:42:01] 2025-10-10 16:41:28,441 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 12:42:01] 2025-10-10 16:41:28,441 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 12:42:01] 2025-10-10 16:41:54,895 | INFO     | [monitor] cgroup control has ended
[2025-10-10 12:42:01] 2025-10-10 16:41:54,955 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140037644756800)>', '<ExcThread(monitor, started 140036938921728)>']
[2025-10-10 12:42:01] 2025-10-10 16:41:55,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 12:42:01] 2025-10-10 16:41:55,650 | INFO     | [monitor] control thread has ended
[2025-10-10 12:42:01] 2025-10-10 16:41:59,980 | INFO     | all workflow threads have been joined
[2025-10-10 12:42:01] 2025-10-10 16:41:59,980 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 12:42:01] 2025-10-10 16:41:59,980 | INFO     | traces error code: 0
[2025-10-10 12:42:01] 2025-10-10 16:41:59,980 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 12:42:01] 2025-10-10 16:42:00,929 [wrapper] ==== pilot stdout END ====
[2025-10-10 12:42:01] 2025-10-10 16:42:00,944 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 12:42:01] 2025-10-10 16:42:00,954 [wrapper] pilotpid: 1004489
[2025-10-10 12:42:01] 2025-10-10 16:42:00,979 [wrapper] Pilot exit status: 0
[2025-10-10 12:42:01] 2025-10-10 16:42:01,094 [wrapper] pandaids: 6837510019
[2025-10-10 12:42:01] 2025-10-10 16:42:01,474 [wrapper] cleanup supervisor_pilot 1433309 1004490
[2025-10-10 12:42:01] 2025-10-10 16:42:01,489 [wrapper] Test setup, not cleaning
[2025-10-10 12:42:01] 2025-10-10 16:42:01,506 [wrapper] apfmon messages muted
[2025-10-10 12:42:01] 2025-10-10 16:42:01,521 [wrapper] ==== wrapper stdout END ====
[2025-10-10 12:42:01] 2025-10-10 16:42:01,534 [wrapper] ==== wrapper stderr END ====
[2025-10-10 12:42:01]  *** Error codes and diagnostics ***
[2025-10-10 12:42:01]     "exeErrorCode": 0,
[2025-10-10 12:42:01]     "exeErrorDiag": "",
[2025-10-10 12:42:01]     "pilotErrorCode": 0,
[2025-10-10 12:42:01]     "pilotErrorDiag": "",
[2025-10-10 12:42:01]  *** Listing of results directory ***
[2025-10-10 12:42:01] total 411372
[2025-10-10 12:42:01] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 03:47 pilot3.tar.gz
[2025-10-10 12:42:01] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 04:00 queuedata.json
[2025-10-10 12:42:01] -rwx------. 1 boincer umatlas     36292 Oct 10 04:00 runpilot2-wrapper.sh
[2025-10-10 12:42:01] -rw-r--r--. 1 boincer umatlas       100 Oct 10 11:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 12:42:01] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 11:47 run_atlas
[2025-10-10 12:42:01] -rw-r--r--. 1 boincer umatlas       105 Oct 10 11:47 job.xml
[2025-10-10 12:42:01] -rw-r--r--. 2 boincer umatlas 223380856 Oct 10 11:47 EVNT.46676267._001419.pool.root.1
[2025-10-10 12:42:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 11:47 start_atlas.sh
[2025-10-10 12:42:01] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 11:47 shared
[2025-10-10 12:42:01] -rw-r--r--. 2 boincer umatlas    569683 Oct 10 11:47 input.tar.gz
[2025-10-10 12:42:01] -rw-r--r--. 1 boincer umatlas         0 Oct 10 11:47 boinc_lockfile
[2025-10-10 12:42:01] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 11:47 pandaJob.out
[2025-10-10 12:42:01] -rw-------. 1 boincer umatlas    975533 Oct 10 11:47 agis_schedconf.cvmfs.json
[2025-10-10 12:42:01] -rw-------. 1 boincer umatlas   1560580 Oct 10 11:47 agis_ddmendpoints.agis.ALL.json
[2025-10-10 12:42:01] drwx------. 5 boincer umatlas      4096 Oct 10 11:47 pilot3
[2025-10-10 12:42:01] -rw-r--r--. 1 boincer umatlas      7162 Oct 10 12:37 init_data.xml
[2025-10-10 12:42:01] -rw-------. 1 boincer umatlas 192381631 Oct 10 12:39 HITS.46676269._034904.pool.root.1
[2025-10-10 12:42:01] -rw-r--r--. 1 boincer umatlas       530 Oct 10 12:39 boinc_task_state.xml
[2025-10-10 12:42:01] -rw-------. 1 boincer umatlas      1032 Oct 10 12:40 memory_monitor_summary.json
[2025-10-10 12:42:01] -rw-------. 1 boincer umatlas    347961 Oct 10 12:40 log.46676269._034904.job.log.tgz.1
[2025-10-10 12:42:01] -rw-------. 1 boincer umatlas        95 Oct 10 12:40 pilot_heartbeat.json
[2025-10-10 12:42:01] -rw-------. 1 boincer umatlas      7772 Oct 10 12:40 heartbeat.json
[2025-10-10 12:42:01] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 12:41 boinc_mmap_file
[2025-10-10 12:42:01] -rw-r--r--. 1 boincer umatlas        27 Oct 10 12:41 wrapper_checkpoint.txt
[2025-10-10 12:42:01] -rw-------. 1 boincer umatlas      4897 Oct 10 12:41 pilotlog.txt
[2025-10-10 12:42:01] -rw-------. 1 boincer umatlas    438964 Oct 10 12:42 log.46676269._034904.job.log.1
[2025-10-10 12:42:01] -rw-------. 1 boincer umatlas       357 Oct 10 12:42 output.list
[2025-10-10 12:42:01] -rw-r--r--. 1 boincer umatlas       620 Oct 10 12:42 runtime_log
[2025-10-10 12:42:01] -rw-------. 1 boincer umatlas    808960 Oct 10 12:42 result.tar.gz
[2025-10-10 12:42:01] -rw-r--r--. 1 boincer umatlas      8700 Oct 10 12:42 runtime_log.err
[2025-10-10 12:42:01] -rw-------. 1 boincer umatlas       651 Oct 10 12:42 mS0KDmcENR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmEZPMDmCZuKWo.diag
[2025-10-10 12:42:01] -rw-r--r--. 1 boincer umatlas     22356 Oct 10 12:42 stderr.txt
[2025-10-10 12:42:02] HITS file was successfully produced:
[2025-10-10 12:42:02] -rw-------. 1 boincer umatlas 192381631 Oct 10 12:39 shared/HITS.pool.root.1
[2025-10-10 12:42:02]  *** Contents of shared directory: ***
[2025-10-10 12:42:02] total 407396
[2025-10-10 12:42:02] -rw-r--r--. 2 boincer umatlas 223380856 Oct 10 11:47 ATLAS.root_0
[2025-10-10 12:42:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 11:47 start_atlas.sh
[2025-10-10 12:42:02] -rw-r--r--. 2 boincer umatlas    569683 Oct 10 11:47 input.tar.gz
[2025-10-10 12:42:02] -rw-------. 1 boincer umatlas 192381631 Oct 10 12:39 HITS.pool.root.1
[2025-10-10 12:42:02] -rw-------. 1 boincer umatlas    808960 Oct 10 12:42 result.tar.gz
12:42:03 (987995): run_atlas exited; CPU time 22152.232924
12:42:03 (987995): called boinc_finish(0)

</stderr_txt>
]]>

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