Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:47:28 (12286): wrapper (7.7.26015): starting
11:47:28 (12286): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 11:47:28] Arguments: --nthreads 8
[2025-10-10 11:47:28] Threads: 8
[2025-10-10 11:47:28] Checking for CVMFS
[2025-10-10 11:47:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 11:47:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 11:47:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 11:47:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 11:47:28] 2.11.2.0 2827 220201 88240 151553 3 57 12117306 20275200 1 130560 1 76685902 99.978 13236224 12136 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 11:47:28] CVMFS is ok
[2025-10-10 11:47:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 11:47:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 11:47:28] Further information can be found at the LHC@home message board.
[2025-10-10 11:47:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 11:47:28] Checking for apptainer binary...
[2025-10-10 11:47:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 11:47:28] Running /usr/bin/apptainer --version
[2025-10-10 11:47:28] apptainer version 1.3.2-1.el7
[2025-10-10 11:47:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 11:47:30] c-115-13.aglt2.org
[2025-10-10 11:47:30] apptainer works
[2025-10-10 11:47:30] Set ATHENA_PROC_NUMBER=8
[2025-10-10 11:47:30] Set ATHENA_CORE_NUMBER=8
[2025-10-10 11:47:30] Starting ATLAS job with PandaID=6837558459
[2025-10-10 11:47:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 13:40:04]  *** The last 200 lines of the pilot log: ***
[2025-10-10 13:40:04] 2025-10-10 17:39:21,587 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 13:40:04] 2025-10-10 17:39:21,587 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 13:40:04] 2025-10-10 17:39:21,587 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 13:40:04] 2025-10-10 17:39:21,590 | INFO     | fitting pss+swap vs Time
[2025-10-10 13:40:04] 2025-10-10 17:39:21,590 | INFO     | sum of square deviations: 412686807.5
[2025-10-10 13:40:04] 2025-10-10 17:39:21,590 | INFO     | sum of deviations: -3654261730.0000005
[2025-10-10 13:40:04] 2025-10-10 17:39:21,591 | INFO     | mean x: 1760114621.5
[2025-10-10 13:40:04] 2025-10-10 17:39:21,591 | INFO     | mean y: 2484940.2545454544
[2025-10-10 13:40:04] 2025-10-10 17:39:21,591 | INFO     | -- intersect: 15587958924.084005
[2025-10-10 13:40:04] 2025-10-10 17:39:21,591 | INFO     | intersect: 15587958924.084005
[2025-10-10 13:40:04] 2025-10-10 17:39:21,591 | INFO     | chi2: 2.2307877345466367
[2025-10-10 13:40:04] 2025-10-10 17:39:21,591 | INFO     | sum of square deviations: 358927660.0
[2025-10-10 13:40:04] 2025-10-10 17:39:21,592 | INFO     | sum of deviations: 3660979782.000001
[2025-10-10 13:40:04] 2025-10-10 17:39:21,592 | INFO     | mean x: 1760114469.0
[2025-10-10 13:40:04] 2025-10-10 17:39:21,592 | INFO     | mean y: 2504939.7714285715
[2025-10-10 13:40:04] 2025-10-10 17:39:21,592 | INFO     | -- intersect: -17950258814.949142
[2025-10-10 13:40:04] 2025-10-10 17:39:21,592 | INFO     | intersect: -17950258814.949142
[2025-10-10 13:40:04] 2025-10-10 17:39:21,593 | INFO     | chi2: 1.4735539550573125
[2025-10-10 13:40:04] 2025-10-10 17:39:21,593 | INFO     | current chi2=1.4735539550573125 (change=33.944680964601815 %)
[2025-10-10 13:40:04] 2025-10-10 17:39:21,593 | INFO     | sum of square deviations: 310052325.0
[2025-10-10 13:40:04] 2025-10-10 17:39:21,593 | INFO     | sum of deviations: 3622813820.5000024
[2025-10-10 13:40:04] 2025-10-10 17:39:21,594 | INFO     | mean x: 1760114316.5
[2025-10-10 13:40:04] 2025-10-10 17:39:21,594 | INFO     | mean y: 2504820.65
[2025-10-10 13:40:04] 2025-10-10 17:39:21,594 | INFO     | -- intersect: -20563593083.876648
[2025-10-10 13:40:04] 2025-10-10 17:39:21,594 | INFO     | intersect: -20563593083.876648
[2025-10-10 13:40:04] 2025-10-10 17:39:21,594 | INFO     | chi2: 1.476056451015498
[2025-10-10 13:40:04] 2025-10-10 17:39:21,594 | INFO     | current chi2=1.476056451015498 (change=-0.16982723636260086 %)
[2025-10-10 13:40:04] 2025-10-10 17:39:21,594 | INFO     | right removable region: 99
[2025-10-10 13:40:04] 2025-10-10 17:39:21,595 | INFO     | sum of square deviations: 358927660.0
[2025-10-10 13:40:04] 2025-10-10 17:39:21,595 | INFO     | sum of deviations: -18473055292.0
[2025-10-10 13:40:04] 2025-10-10 17:39:21,595 | INFO     | mean x: 1760114774.0
[2025-10-10 13:40:04] 2025-10-10 17:39:21,595 | INFO     | mean y: 2526013.6952380952
[2025-10-10 13:40:04] 2025-10-10 17:39:21,596 | INFO     | -- intersect: 90590968098.0085
[2025-10-10 13:40:04] 2025-10-10 17:39:21,596 | INFO     | intersect: 90590968098.0085
[2025-10-10 13:40:04] 2025-10-10 17:39:21,596 | INFO     | chi2: 0.8937553753589411
[2025-10-10 13:40:04] 2025-10-10 17:39:21,596 | INFO     | current chi2=0.8937553753589411 (change=59.935436190634285 %)
[2025-10-10 13:40:04] 2025-10-10 17:39:21,596 | INFO     | sum of square deviations: 310052325.0
[2025-10-10 13:40:04] 2025-10-10 17:39:21,597 | INFO     | sum of deviations: -15423008657.5
[2025-10-10 13:40:04] 2025-10-10 17:39:21,597 | INFO     | mean x: 1760114926.5
[2025-10-10 13:40:04] 2025-10-10 17:39:21,597 | INFO     | mean y: 2516437.19
[2025-10-10 13:40:04] 2025-10-10 17:39:21,597 | INFO     | -- intersect: 87556343842.30453
[2025-10-10 13:40:04] 2025-10-10 17:39:21,597 | INFO     | intersect: 87556343842.30453
[2025-10-10 13:40:04] 2025-10-10 17:39:21,597 | INFO     | chi2: 0.8890625497145597
[2025-10-10 13:40:04] 2025-10-10 17:39:21,597 | INFO     | current chi2=0.8890625497145597 (change=0.5250682428060097 %)
[2025-10-10 13:40:04] 2025-10-10 17:39:21,598 | INFO     | left removable region: 20
[2025-10-10 13:40:04] 2025-10-10 17:39:21,598 | INFO     | sum of square deviations: 152858680.0
[2025-10-10 13:40:04] 2025-10-10 17:39:21,598 | INFO     | sum of deviations: -1365104603.9999995
[2025-10-10 13:40:04] 2025-10-10 17:39:21,598 | INFO     | mean x: 1760114896.0
[2025-10-10 13:40:04] 2025-10-10 17:39:21,598 | INFO     | mean y: 2512833.911392405
[2025-10-10 13:40:04] 2025-10-10 17:39:21,598 | INFO     | -- intersect: 15721220781.007235
[2025-10-10 13:40:04] 2025-10-10 17:39:21,599 | INFO     | intersect: 15721220781.007235
[2025-10-10 13:40:04] 2025-10-10 17:39:21,599 | INFO     | chi2: 0.03422891001731676
[2025-10-10 13:40:04] 2025-10-10 17:39:21,599 | INFO     | -- intersect: 15721220781.007235
[2025-10-10 13:40:04] 2025-10-10 17:39:21,599 | INFO     | current memory leak: -8.93 B/s (using 79 data points, chi2=0.03)
[2025-10-10 13:40:04] 2025-10-10 17:39:21,599 | INFO     | could have reported an average CPU frequency of 2090 MHz (7 samples)
[2025-10-10 13:40:04] 2025-10-10 17:39:21,599 | INFO     | ..............................
[2025-10-10 13:40:04] 2025-10-10 17:39:21,600 | INFO     | . Timing measurements:
[2025-10-10 13:40:04] 2025-10-10 17:39:21,600 | INFO     | . get job = 0 s
[2025-10-10 13:40:04] 2025-10-10 17:39:21,600 | INFO     | . initial setup = 2 s
[2025-10-10 13:40:04] 2025-10-10 17:39:21,600 | INFO     | . payload setup = 7 s
[2025-10-10 13:40:04] 2025-10-10 17:39:21,600 | INFO     | . stage-in = 0 s
[2025-10-10 13:40:04] 2025-10-10 17:39:21,600 | INFO     | . payload execution = 6654 s
[2025-10-10 13:40:04] 2025-10-10 17:39:21,600 | INFO     | . stage-out = 0 s
[2025-10-10 13:40:04] 2025-10-10 17:39:21,600 | INFO     | . log creation = 0 s
[2025-10-10 13:40:04] 2025-10-10 17:39:21,600 | INFO     | ..............................
[2025-10-10 13:40:04] 2025-10-10 17:39:21,687 | INFO     | 
[2025-10-10 13:40:04] 2025-10-10 17:39:21,688 | INFO     | job summary report
[2025-10-10 13:40:04] 2025-10-10 17:39:21,688 | INFO     | --------------------------------------------------
[2025-10-10 13:40:04] 2025-10-10 17:39:21,688 | INFO     | PanDA job id: 6837558459
[2025-10-10 13:40:04] 2025-10-10 17:39:21,688 | INFO     | task id: 46676269
[2025-10-10 13:40:04] 2025-10-10 17:39:21,688 | INFO     | errors: (none)
[2025-10-10 13:40:04] 2025-10-10 17:39:21,688 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 13:40:04] 2025-10-10 17:39:21,689 | INFO     | pilot state: finished 
[2025-10-10 13:40:04] 2025-10-10 17:39:21,689 | INFO     | transexitcode: 0
[2025-10-10 13:40:04] 2025-10-10 17:39:21,689 | INFO     | exeerrorcode: 0
[2025-10-10 13:40:04] 2025-10-10 17:39:21,689 | INFO     | exeerrordiag: 
[2025-10-10 13:40:04] 2025-10-10 17:39:21,689 | INFO     | exitcode: 0
[2025-10-10 13:40:04] 2025-10-10 17:39:21,689 | INFO     | exitmsg: OK
[2025-10-10 13:40:04] 2025-10-10 17:39:21,690 | INFO     | cpuconsumptiontime: 49157 s
[2025-10-10 13:40:04] 2025-10-10 17:39:21,690 | INFO     | nevents: 400
[2025-10-10 13:40:04] 2025-10-10 17:39:21,690 | INFO     | neventsw: 0
[2025-10-10 13:40:04] 2025-10-10 17:39:21,690 | INFO     | pid: 22468
[2025-10-10 13:40:04] 2025-10-10 17:39:21,690 | INFO     | pgrp: 22468
[2025-10-10 13:40:04] 2025-10-10 17:39:21,690 | INFO     | corecount: 8
[2025-10-10 13:40:04] 2025-10-10 17:39:21,691 | INFO     | event service: False
[2025-10-10 13:40:04] 2025-10-10 17:39:21,691 | INFO     | sizes: {0: 2348630, 1: 2348885, 7: 2349147, 12: 2349175, 6666: 2376261, 6667: 2385259, 6670: 2385443, 6678: 2385637}
[2025-10-10 13:40:04] 2025-10-10 17:39:21,691 | INFO     | --------------------------------------------------
[2025-10-10 13:40:04] 2025-10-10 17:39:21,691 | INFO     | 
[2025-10-10 13:40:04] 2025-10-10 17:39:21,691 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 13:40:04] 2025-10-10 17:39:21,720 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 13:40:04] 2025-10-10 17:39:21,720 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 13:40:04] 2025-10-10 17:39:21,720 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 13:40:04] 2025-10-10 17:39:21,720 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 13:40:04] 2025-10-10 17:39:21,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 13:40:04] 2025-10-10 17:39:21,721 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 13:40:04] 2025-10-10 17:39:21,721 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 13:40:04] 2025-10-10 17:39:21,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 13:40:04] 2025-10-10 17:39:21,721 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 13:40:04] 2025-10-10 17:39:21,722 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 13:40:04] 2025-10-10 17:39:21,722 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 13:40:04] 2025-10-10 17:39:21,722 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 13:40:04] 2025-10-10 17:39:21,722 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 13:40:04] 2025-10-10 17:39:21,722 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 13:40:04] 2025-10-10 17:39:21,722 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 13:40:04] 2025-10-10 17:39:21,723 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 13:40:04] 2025-10-10 17:39:21,723 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 13:40:04] 2025-10-10 17:39:21,723 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 13:40:04] 2025-10-10 17:39:21,723 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 13:40:04] 2025-10-10 17:39:21,723 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 13:40:04] 2025-10-10 17:39:21,724 | INFO     | job 6837558459 has completed (purged errors)
[2025-10-10 13:40:04] 2025-10-10 17:39:21,724 | INFO     | overall cleanup function is called
[2025-10-10 13:40:04] 2025-10-10 17:39:22,732 | INFO     | --- collectZombieJob: --- 10, [22468]
[2025-10-10 13:40:04] 2025-10-10 17:39:22,733 | INFO     | zombie collector waiting for pid 22468
[2025-10-10 13:40:04] 2025-10-10 17:39:22,733 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 13:40:04] 2025-10-10 17:39:22,733 | INFO     | collected zombie processes
[2025-10-10 13:40:04] 2025-10-10 17:39:22,733 | INFO     | will attempt to kill all subprocesses of pid=22468
[2025-10-10 13:40:04] 2025-10-10 17:39:22,820 | INFO     | process IDs to be killed: [22468] (in reverse order)
[2025-10-10 13:40:04] 2025-10-10 17:39:22,876 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 13:40:04] 2025-10-10 17:39:22,877 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 13:40:04] 2025-10-10 17:39:22,881 | INFO     | did not find any defunct processes belonging to 22468
[2025-10-10 13:40:04] 2025-10-10 17:39:22,885 | INFO     | did not find any defunct processes belonging to 22468
[2025-10-10 13:40:04] 2025-10-10 17:39:22,885 | INFO     | ready for new job
[2025-10-10 13:40:04] 2025-10-10 17:39:22,886 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 13:40:04] 2025-10-10 17:39:22,888 | INFO     | ***************************************
[2025-10-10 13:40:04] 2025-10-10 17:39:22,888 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 13:40:04] 2025-10-10 17:39:22,888 | INFO     | ***************************************
[2025-10-10 13:40:04] 2025-10-10 17:39:22,888 | INFO     | 
[2025-10-10 13:40:04] 2025-10-10 17:39:22,889 | INFO     | architecture information:
[2025-10-10 13:40:04] 2025-10-10 17:39:22,889 | INFO     | executing command: cat /etc/os-release
[2025-10-10 13:40:04] 2025-10-10 17:39:22,907 | INFO     | cat /etc/os-release:
[2025-10-10 13:40:04] NAME="CentOS Linux"
[2025-10-10 13:40:04] VERSION="7 (Core)"
[2025-10-10 13:40:04] ID="centos"
[2025-10-10 13:40:04] ID_LIKE="rhel fedora"
[2025-10-10 13:40:04] VERSION_ID="7"
[2025-10-10 13:40:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 13:40:04] ANSI_COLOR="0;31"
[2025-10-10 13:40:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 13:40:04] HOME_URL="https://www.centos.org/"
[2025-10-10 13:40:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 13:40:04] 
[2025-10-10 13:40:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 13:40:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 13:40:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 13:40:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 13:40:04] 
[2025-10-10 13:40:04] 2025-10-10 17:39:22,908 | INFO     | ***************************************
[2025-10-10 13:40:04] 2025-10-10 17:39:23,411 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 13:40:04] 2025-10-10 17:39:23,432 | INFO     | sufficient remaining disk space (18589155328 B)
[2025-10-10 13:40:04] 2025-10-10 17:39:23,432 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 13:40:04] 2025-10-10 17:39:23,433 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 13:40:04] 2025-10-10 17:39:23,433 | INFO     | update_server=False
[2025-10-10 13:40:04] 2025-10-10 17:39:23,433 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 13:40:04] 2025-10-10 17:39:23,434 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 13:40:04] 2025-10-10 17:39:23,434 | INFO     | aborting loop
[2025-10-10 13:40:04] 2025-10-10 17:39:23,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 13:40:04] 2025-10-10 17:39:23,467 | INFO     | all data control threads have been joined
[2025-10-10 13:40:04] 2025-10-10 17:39:23,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 13:40:04] 2025-10-10 17:39:24,138 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 13:40:04] 2025-10-10 17:39:24,205 | INFO     | all payload control threads have been joined
[2025-10-10 13:40:04] 2025-10-10 17:39:24,439 | INFO     | [job] retrieve thread has finished
[2025-10-10 13:40:04] 2025-10-10 17:39:24,440 | INFO     | [job] job monitor thread has finished
[2025-10-10 13:40:04] 2025-10-10 17:39:24,440 | INFO     | [job] queue monitor thread has finished
[2025-10-10 13:40:04] 2025-10-10 17:39:24,473 | INFO     | [data] control thread has finished
[2025-10-10 13:40:04] 2025-10-10 17:39:24,741 | INFO     | all job control threads have been joined
[2025-10-10 13:40:04] 2025-10-10 17:39:25,211 | INFO     | [payload] control thread has finished
[2025-10-10 13:40:04] 2025-10-10 17:39:25,212 | INFO     | [data] copytool_in thread has finished
[2025-10-10 13:40:04] 2025-10-10 17:39:25,212 | INFO     | [job] validate thread has finished
[2025-10-10 13:40:04] 2025-10-10 17:39:25,220 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 13:40:04] 2025-10-10 17:39:25,223 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 13:40:04] 2025-10-10 17:39:25,372 | INFO     | [payload] validate_post thread has finished
[2025-10-10 13:40:04] 2025-10-10 17:39:25,691 | INFO     | [payload] failed_post thread has finished
[2025-10-10 13:40:04] 2025-10-10 17:39:25,747 | INFO     | [job] control thread has finished
[2025-10-10 13:40:04] 2025-10-10 17:39:25,891 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 13:40:04] 2025-10-10 17:39:25,897 | INFO     | [data] copytool_out thread has finished
[2025-10-10 13:40:04] 2025-10-10 17:39:28,144 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 13:40:04] 2025-10-10 17:39:33,465 | INFO     | job.realtimelogging is not enabled
[2025-10-10 13:40:04] 2025-10-10 17:39:34,470 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 13:40:04] 2025-10-10 17:39:53,385 | INFO     | PID=16040 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 13:40:04] 2025-10-10 17:39:53,385 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 13:40:04] 2025-10-10 17:39:53,385 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 13:40:04] 2025-10-10 17:39:53,385 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 13:40:04] 2025-10-10 17:39:57,243 | INFO     | [monitor] cgroup control has ended
[2025-10-10 13:40:04] 2025-10-10 17:39:58,725 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140203796969280)>', '<ExcThread(monitor, started 140202748139264)>']
[2025-10-10 13:40:04] 2025-10-10 17:39:59,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 13:40:04] 2025-10-10 17:39:59,410 | INFO     | [monitor] control thread has ended
[2025-10-10 13:40:04] 2025-10-10 17:40:03,750 | INFO     | all workflow threads have been joined
[2025-10-10 13:40:04] 2025-10-10 17:40:03,751 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 13:40:04] 2025-10-10 17:40:03,752 | INFO     | traces error code: 0
[2025-10-10 13:40:04] 2025-10-10 17:40:03,752 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 13:40:04] 2025-10-10 17:40:03,870 [wrapper] ==== pilot stdout END ====
[2025-10-10 13:40:04] 2025-10-10 17:40:03,875 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 13:40:04] 2025-10-10 17:40:03,880 [wrapper] pilotpid: 16040
[2025-10-10 13:40:04] 2025-10-10 17:40:03,885 [wrapper] Pilot exit status: 0
[2025-10-10 13:40:04] 2025-10-10 17:40:03,903 [wrapper] pandaids: 6837558459
[2025-10-10 13:40:04] 2025-10-10 17:40:03,951 [wrapper] cleanup supervisor_pilot 28021 16041
[2025-10-10 13:40:04] 2025-10-10 17:40:03,955 [wrapper] Test setup, not cleaning
[2025-10-10 13:40:04] 2025-10-10 17:40:03,960 [wrapper] apfmon messages muted
[2025-10-10 13:40:04] 2025-10-10 17:40:03,965 [wrapper] ==== wrapper stdout END ====
[2025-10-10 13:40:04] 2025-10-10 17:40:03,969 [wrapper] ==== wrapper stderr END ====
[2025-10-10 13:40:04]  *** Error codes and diagnostics ***
[2025-10-10 13:40:04]     "exeErrorCode": 0,
[2025-10-10 13:40:04]     "exeErrorDiag": "",
[2025-10-10 13:40:04]     "pilotErrorCode": 0,
[2025-10-10 13:40:04]     "pilotErrorDiag": "",
[2025-10-10 13:40:04]  *** Listing of results directory ***
[2025-10-10 13:40:04] total 409412
[2025-10-10 13:40:04] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 06:29 queuedata.json
[2025-10-10 13:40:04] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 06:29 pilot3.tar.gz
[2025-10-10 13:40:04] -rwx------ 1 boincer umatlas     36292 Oct 10 06:29 runpilot2-wrapper.sh
[2025-10-10 13:40:04] -rw-r--r-- 1 boincer umatlas       100 Oct 10 11:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 13:40:04] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 11:47 run_atlas
[2025-10-10 13:40:04] -rw-r--r-- 1 boincer umatlas       105 Oct 10 11:47 job.xml
[2025-10-10 13:40:04] -rw-r--r-- 2 boincer umatlas 221281339 Oct 10 11:47 EVNT.46676267._001494.pool.root.1
[2025-10-10 13:40:04] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 11:47 start_atlas.sh
[2025-10-10 13:40:04] drwxrwx--x 2 boincer umatlas      4096 Oct 10 11:47 shared
[2025-10-10 13:40:04] -rw-r--r-- 2 boincer umatlas    569682 Oct 10 11:47 input.tar.gz
[2025-10-10 13:40:04] -rw-r--r-- 1 boincer umatlas         0 Oct 10 11:47 boinc_lockfile
[2025-10-10 13:40:04] -rw-r--r-- 1 boincer umatlas      2550 Oct 10 11:47 pandaJob.out
[2025-10-10 13:40:04] -rw------- 1 boincer umatlas    975533 Oct 10 11:47 agis_schedconf.cvmfs.json
[2025-10-10 13:40:04] -rw------- 1 boincer umatlas   1560580 Oct 10 11:47 agis_ddmendpoints.agis.ALL.json
[2025-10-10 13:40:04] drwx------ 5 boincer umatlas      4096 Oct 10 11:47 pilot3
[2025-10-10 13:40:04] -rw-r--r-- 1 boincer umatlas      5909 Oct 10 13:37 init_data.xml
[2025-10-10 13:40:04] -rw------- 1 boincer umatlas 191425716 Oct 10 13:38 HITS.46676269._036782.pool.root.1
[2025-10-10 13:40:04] -rw------- 1 boincer umatlas      1052 Oct 10 13:39 memory_monitor_summary.json
[2025-10-10 13:40:04] -rw------- 1 boincer umatlas    367185 Oct 10 13:39 log.46676269._036782.job.log.tgz.1
[2025-10-10 13:40:04] -rw-r--r-- 1 boincer umatlas       529 Oct 10 13:39 boinc_task_state.xml
[2025-10-10 13:40:04] -rw------- 1 boincer umatlas        95 Oct 10 13:39 pilot_heartbeat.json
[2025-10-10 13:40:04] -rw------- 1 boincer umatlas      7851 Oct 10 13:39 heartbeat.json
[2025-10-10 13:40:04] -rw-r--r-- 1 boincer umatlas        27 Oct 10 13:39 wrapper_checkpoint.txt
[2025-10-10 13:40:04] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 13:39 boinc_mmap_file
[2025-10-10 13:40:04] -rw------- 1 boincer umatlas      4818 Oct 10 13:40 pilotlog.txt
[2025-10-10 13:40:04] -rw------- 1 boincer umatlas    946543 Oct 10 13:40 log.46676269._036782.job.log.1
[2025-10-10 13:40:04] -rw------- 1 boincer umatlas       357 Oct 10 13:40 output.list
[2025-10-10 13:40:04] -rw-r--r-- 1 boincer umatlas       620 Oct 10 13:40 runtime_log
[2025-10-10 13:40:04] -rw------- 1 boincer umatlas   1331200 Oct 10 13:40 result.tar.gz
[2025-10-10 13:40:04] -rw------- 1 boincer umatlas       658 Oct 10 13:40 xGJODmTYPR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm61cNDmoYEYKo.diag
[2025-10-10 13:40:04] -rw-r--r-- 1 boincer umatlas      8703 Oct 10 13:40 runtime_log.err
[2025-10-10 13:40:04] -rw-r--r-- 1 boincer umatlas     20848 Oct 10 13:40 stderr.txt
[2025-10-10 13:40:04] HITS file was successfully produced:
[2025-10-10 13:40:04] -rw------- 1 boincer umatlas 191425716 Oct 10 13:38 shared/HITS.pool.root.1
[2025-10-10 13:40:04]  *** Contents of shared directory: ***
[2025-10-10 13:40:04] total 404920
[2025-10-10 13:40:04] -rw-r--r-- 2 boincer umatlas 221281339 Oct 10 11:47 ATLAS.root_0
[2025-10-10 13:40:04] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 11:47 start_atlas.sh
[2025-10-10 13:40:04] -rw-r--r-- 2 boincer umatlas    569682 Oct 10 11:47 input.tar.gz
[2025-10-10 13:40:04] -rw------- 1 boincer umatlas 191425716 Oct 10 13:38 HITS.pool.root.1
[2025-10-10 13:40:04] -rw------- 1 boincer umatlas   1331200 Oct 10 13:40 result.tar.gz
13:40:05 (12286): run_atlas exited; CPU time 49120.457491
13:40:05 (12286): called boinc_finish(0)

</stderr_txt>
]]>

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