Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:40:05 (27062): wrapper (7.7.26015): starting
11:40:05 (27062): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 11:40:05] Arguments: --nthreads 8
[2025-10-10 11:40:05] Threads: 8
[2025-10-10 11:40:05] Checking for CVMFS
[2025-10-10 11:40:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 11:40:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 11:40:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 11:40:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 11:40:06] 2.11.2.0 2830 5809 73584 151553 1 56 13693844 20275201 1 130560 0 3240222 99.987 198865 34429 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 11:40:06] CVMFS is ok
[2025-10-10 11:40:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 11:40:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 11:40:06] Further information can be found at the LHC@home message board.
[2025-10-10 11:40:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 11:40:06] Checking for apptainer binary...
[2025-10-10 11:40:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 11:40:06] Running /usr/bin/apptainer --version
[2025-10-10 11:40:06] apptainer version 1.3.2-1.el7
[2025-10-10 11:40:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 11:40:07] c-204-20.aglt2.org
[2025-10-10 11:40:07] apptainer works
[2025-10-10 11:40:07] Set ATHENA_PROC_NUMBER=8
[2025-10-10 11:40:07] Set ATHENA_CORE_NUMBER=8
[2025-10-10 11:40:07] Starting ATLAS job with PandaID=6837454991
[2025-10-10 11:40:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 13:41:41]  *** The last 200 lines of the pilot log: ***
[2025-10-10 13:41:41] 2025-10-10 17:40:57,977 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 13:41:41] 2025-10-10 17:40:59,923 | INFO     | time since job start (7234s) is within the limit (172800.0s)
[2025-10-10 13:41:41] 2025-10-10 17:41:00,479 | INFO     | monitor loop #539: job 0:6837454991 is in state 'finished'
[2025-10-10 13:41:41] 2025-10-10 17:41:00,480 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 13:41:41] 2025-10-10 17:41:01,583 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-10 13:41:41] 2025-10-10 17:41:01,587 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-10-10 13:41:41] 2025-10-10 17:41:01,589 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837454991/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 13:41:41] 2025-10-10 17:41:01,589 | INFO     | extracted standard info from prmon json
[2025-10-10 13:41:41] 2025-10-10 17:41:01,590 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 13:41:41] 2025-10-10 17:41:01,590 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 13:41:41] 2025-10-10 17:41:01,590 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 13:41:41] 2025-10-10 17:41:01,590 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 13:41:41] 2025-10-10 17:41:01,593 | INFO     | fitting pss+swap vs Time
[2025-10-10 13:41:41] 2025-10-10 17:41:01,593 | INFO     | sum of square deviations: 509440249.5
[2025-10-10 13:41:41] 2025-10-10 17:41:01,594 | INFO     | sum of deviations: 5940972603.500005
[2025-10-10 13:41:41] 2025-10-10 17:41:01,594 | INFO     | mean x: 1760114424.5
[2025-10-10 13:41:41] 2025-10-10 17:41:01,594 | INFO     | mean y: 2527041.0084745763
[2025-10-10 13:41:41] 2025-10-10 17:41:01,595 | INFO     | -- intersect: -20523514207.681038
[2025-10-10 13:41:41] 2025-10-10 17:41:01,595 | INFO     | intersect: -20523514207.681038
[2025-10-10 13:41:41] 2025-10-10 17:41:01,595 | INFO     | chi2: 1.6651236245523757
[2025-10-10 13:41:41] 2025-10-10 17:41:01,595 | INFO     | sum of square deviations: 447383272.0
[2025-10-10 13:41:41] 2025-10-10 17:41:01,596 | INFO     | sum of deviations: 5761903901.000005
[2025-10-10 13:41:41] 2025-10-10 17:41:01,596 | INFO     | mean x: 1760114272.0
[2025-10-10 13:41:41] 2025-10-10 17:41:01,596 | INFO     | mean y: 2526600.646017699
[2025-10-10 13:41:41] 2025-10-10 17:41:01,596 | INFO     | -- intersect: -22666200472.463196
[2025-10-10 13:41:41] 2025-10-10 17:41:01,596 | INFO     | intersect: -22666200472.463196
[2025-10-10 13:41:41] 2025-10-10 17:41:01,597 | INFO     | chi2: 1.6676303003355075
[2025-10-10 13:41:41] 2025-10-10 17:41:01,597 | INFO     | current chi2=1.6676303003355075 (change=-0.15053992065037505 %)
[2025-10-10 13:41:41] 2025-10-10 17:41:01,597 | INFO     | right removable region: 112
[2025-10-10 13:41:41] 2025-10-10 17:41:01,597 | INFO     | sum of square deviations: 447383272.0
[2025-10-10 13:41:41] 2025-10-10 17:41:01,598 | INFO     | sum of deviations: -12661099122.0
[2025-10-10 13:41:41] 2025-10-10 17:41:01,598 | INFO     | mean x: 1760114577.0
[2025-10-10 13:41:41] 2025-10-10 17:41:01,598 | INFO     | mean y: 2571917.6991150444
[2025-10-10 13:41:41] 2025-10-10 17:41:01,598 | INFO     | -- intersect: 49814414514.87629
[2025-10-10 13:41:41] 2025-10-10 17:41:01,598 | INFO     | intersect: 49814414514.87629
[2025-10-10 13:41:41] 2025-10-10 17:41:01,599 | INFO     | chi2: 0.12313457759642037
[2025-10-10 13:41:41] 2025-10-10 17:41:01,599 | INFO     | current chi2=0.12313457759642037 (change=92.6050789394378 %)
[2025-10-10 13:41:41] 2025-10-10 17:41:01,599 | INFO     | sum of square deviations: 390582207.0
[2025-10-10 13:41:41] 2025-10-10 17:41:01,599 | INFO     | sum of deviations: -11980108846.999994
[2025-10-10 13:41:41] 2025-10-10 17:41:01,600 | INFO     | mean x: 1760114729.5
[2025-10-10 13:41:41] 2025-10-10 17:41:01,600 | INFO     | mean y: 2569938.1666666665
[2025-10-10 13:41:41] 2025-10-10 17:41:01,600 | INFO     | -- intersect: 53989581288.68103
[2025-10-10 13:41:41] 2025-10-10 17:41:01,600 | INFO     | intersect: 53989581288.68103
[2025-10-10 13:41:41] 2025-10-10 17:41:01,600 | INFO     | chi2: 0.10572971365512576
[2025-10-10 13:41:41] 2025-10-10 17:41:01,600 | INFO     | current chi2=0.10572971365512576 (change=14.134830590266775 %)
[2025-10-10 13:41:41] 2025-10-10 17:41:01,601 | INFO     | left removable region: 20
[2025-10-10 13:41:41] 2025-10-10 17:41:01,601 | INFO     | sum of square deviations: 241429643.0
[2025-10-10 13:41:41] 2025-10-10 17:41:01,601 | INFO     | sum of deviations: -4761110572.999998
[2025-10-10 13:41:41] 2025-10-10 17:41:01,601 | INFO     | mean x: 1760114851.5
[2025-10-10 13:41:41] 2025-10-10 17:41:01,602 | INFO     | mean y: 2548864.7608695654
[2025-10-10 13:41:41] 2025-10-10 17:41:01,602 | INFO     | -- intersect: 34712874096.741486
[2025-10-10 13:41:41] 2025-10-10 17:41:01,602 | INFO     | intersect: 34712874096.741486
[2025-10-10 13:41:41] 2025-10-10 17:41:01,602 | INFO     | chi2: 0.07372151413666911
[2025-10-10 13:41:41] 2025-10-10 17:41:01,602 | INFO     | -- intersect: 34712874096.741486
[2025-10-10 13:41:41] 2025-10-10 17:41:01,602 | INFO     | current memory leak: -19.72 B/s (using 92 data points, chi2=0.07)
[2025-10-10 13:41:41] 2025-10-10 17:41:01,603 | INFO     | could have reported an average CPU frequency of 1950 MHz (7 samples)
[2025-10-10 13:41:41] 2025-10-10 17:41:01,603 | INFO     | ..............................
[2025-10-10 13:41:41] 2025-10-10 17:41:01,603 | INFO     | . Timing measurements:
[2025-10-10 13:41:41] 2025-10-10 17:41:01,603 | INFO     | . get job = 0 s
[2025-10-10 13:41:41] 2025-10-10 17:41:01,603 | INFO     | . initial setup = 2 s
[2025-10-10 13:41:41] 2025-10-10 17:41:01,604 | INFO     | . payload setup = 8 s
[2025-10-10 13:41:41] 2025-10-10 17:41:01,604 | INFO     | . stage-in = 0 s
[2025-10-10 13:41:41] 2025-10-10 17:41:01,604 | INFO     | . payload execution = 7194 s
[2025-10-10 13:41:41] 2025-10-10 17:41:01,604 | INFO     | . stage-out = 0 s
[2025-10-10 13:41:41] 2025-10-10 17:41:01,604 | INFO     | . log creation = 0 s
[2025-10-10 13:41:41] 2025-10-10 17:41:01,604 | INFO     | ..............................
[2025-10-10 13:41:41] 2025-10-10 17:41:01,703 | INFO     | 
[2025-10-10 13:41:41] 2025-10-10 17:41:01,703 | INFO     | job summary report
[2025-10-10 13:41:41] 2025-10-10 17:41:01,703 | INFO     | --------------------------------------------------
[2025-10-10 13:41:41] 2025-10-10 17:41:01,704 | INFO     | PanDA job id: 6837454991
[2025-10-10 13:41:41] 2025-10-10 17:41:01,704 | INFO     | task id: 46676269
[2025-10-10 13:41:41] 2025-10-10 17:41:01,704 | INFO     | errors: (none)
[2025-10-10 13:41:41] 2025-10-10 17:41:01,704 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 13:41:41] 2025-10-10 17:41:01,704 | INFO     | pilot state: finished 
[2025-10-10 13:41:41] 2025-10-10 17:41:01,705 | INFO     | transexitcode: 0
[2025-10-10 13:41:41] 2025-10-10 17:41:01,705 | INFO     | exeerrorcode: 0
[2025-10-10 13:41:41] 2025-10-10 17:41:01,705 | INFO     | exeerrordiag: 
[2025-10-10 13:41:41] 2025-10-10 17:41:01,705 | INFO     | exitcode: 0
[2025-10-10 13:41:41] 2025-10-10 17:41:01,705 | INFO     | exitmsg: OK
[2025-10-10 13:41:41] 2025-10-10 17:41:01,705 | INFO     | cpuconsumptiontime: 53319 s
[2025-10-10 13:41:41] 2025-10-10 17:41:01,706 | INFO     | nevents: 400
[2025-10-10 13:41:41] 2025-10-10 17:41:01,706 | INFO     | neventsw: 0
[2025-10-10 13:41:41] 2025-10-10 17:41:01,706 | INFO     | pid: 4912
[2025-10-10 13:41:41] 2025-10-10 17:41:01,706 | INFO     | pgrp: 4912
[2025-10-10 13:41:41] 2025-10-10 17:41:01,706 | INFO     | corecount: 8
[2025-10-10 13:41:41] 2025-10-10 17:41:01,706 | INFO     | event service: False
[2025-10-10 13:41:41] 2025-10-10 17:41:01,707 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 12: 2349175, 7206: 2376457, 7207: 2376456, 7208: 2385638, 7211: 2385694, 7220: 2385888}
[2025-10-10 13:41:41] 2025-10-10 17:41:01,707 | INFO     | --------------------------------------------------
[2025-10-10 13:41:41] 2025-10-10 17:41:01,707 | INFO     | 
[2025-10-10 13:41:41] 2025-10-10 17:41:01,707 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 13:41:41] 2025-10-10 17:41:01,735 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 13:41:41] 2025-10-10 17:41:01,735 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 13:41:41] 2025-10-10 17:41:01,735 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 13:41:41] 2025-10-10 17:41:01,736 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 13:41:41] 2025-10-10 17:41:01,736 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 13:41:41] 2025-10-10 17:41:01,736 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 13:41:41] 2025-10-10 17:41:01,736 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 13:41:41] 2025-10-10 17:41:01,736 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 13:41:41] 2025-10-10 17:41:01,737 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 13:41:41] 2025-10-10 17:41:01,737 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 13:41:41] 2025-10-10 17:41:01,737 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 13:41:41] 2025-10-10 17:41:01,737 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 13:41:41] 2025-10-10 17:41:01,737 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 13:41:41] 2025-10-10 17:41:01,737 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 13:41:41] 2025-10-10 17:41:01,738 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 13:41:41] 2025-10-10 17:41:01,738 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 13:41:41] 2025-10-10 17:41:01,738 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 13:41:41] 2025-10-10 17:41:01,738 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 13:41:41] 2025-10-10 17:41:01,738 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 13:41:41] 2025-10-10 17:41:01,738 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 13:41:41] 2025-10-10 17:41:01,739 | INFO     | job 6837454991 has completed (purged errors)
[2025-10-10 13:41:41] 2025-10-10 17:41:01,739 | INFO     | overall cleanup function is called
[2025-10-10 13:41:41] 2025-10-10 17:41:02,747 | INFO     | --- collectZombieJob: --- 10, [4912]
[2025-10-10 13:41:41] 2025-10-10 17:41:02,747 | INFO     | zombie collector waiting for pid 4912
[2025-10-10 13:41:41] 2025-10-10 17:41:02,748 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 13:41:41] 2025-10-10 17:41:02,748 | INFO     | collected zombie processes
[2025-10-10 13:41:41] 2025-10-10 17:41:02,748 | INFO     | will attempt to kill all subprocesses of pid=4912
[2025-10-10 13:41:41] 2025-10-10 17:41:02,838 | INFO     | process IDs to be killed: [4912] (in reverse order)
[2025-10-10 13:41:41] 2025-10-10 17:41:02,895 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 13:41:41] 2025-10-10 17:41:02,895 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 13:41:41] 2025-10-10 17:41:02,899 | INFO     | did not find any defunct processes belonging to 4912
[2025-10-10 13:41:41] 2025-10-10 17:41:02,903 | INFO     | did not find any defunct processes belonging to 4912
[2025-10-10 13:41:41] 2025-10-10 17:41:02,903 | INFO     | ready for new job
[2025-10-10 13:41:41] 2025-10-10 17:41:02,904 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 13:41:41] 2025-10-10 17:41:02,906 | INFO     | ***************************************
[2025-10-10 13:41:41] 2025-10-10 17:41:02,906 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 13:41:41] 2025-10-10 17:41:02,906 | INFO     | ***************************************
[2025-10-10 13:41:41] 2025-10-10 17:41:02,906 | INFO     | 
[2025-10-10 13:41:41] 2025-10-10 17:41:02,907 | INFO     | architecture information:
[2025-10-10 13:41:41] 2025-10-10 17:41:02,907 | INFO     | executing command: cat /etc/os-release
[2025-10-10 13:41:41] 2025-10-10 17:41:02,927 | INFO     | cat /etc/os-release:
[2025-10-10 13:41:41] NAME="CentOS Linux"
[2025-10-10 13:41:41] VERSION="7 (Core)"
[2025-10-10 13:41:41] ID="centos"
[2025-10-10 13:41:41] ID_LIKE="rhel fedora"
[2025-10-10 13:41:41] VERSION_ID="7"
[2025-10-10 13:41:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 13:41:41] ANSI_COLOR="0;31"
[2025-10-10 13:41:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 13:41:41] HOME_URL="https://www.centos.org/"
[2025-10-10 13:41:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 13:41:41] 
[2025-10-10 13:41:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 13:41:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 13:41:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 13:41:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 13:41:41] 
[2025-10-10 13:41:41] 2025-10-10 17:41:02,928 | INFO     | ***************************************
[2025-10-10 13:41:41] 2025-10-10 17:41:03,431 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 13:41:41] 2025-10-10 17:41:03,453 | INFO     | sufficient remaining disk space (18714984448 B)
[2025-10-10 13:41:41] 2025-10-10 17:41:03,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 13:41:41] 2025-10-10 17:41:03,454 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 13:41:41] 2025-10-10 17:41:03,454 | INFO     | update_server=False
[2025-10-10 13:41:41] 2025-10-10 17:41:03,454 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 13:41:41] 2025-10-10 17:41:03,455 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 13:41:41] 2025-10-10 17:41:03,455 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 13:41:41] 2025-10-10 17:41:03,649 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 13:41:41] 2025-10-10 17:41:03,789 | INFO     | all job control threads have been joined
[2025-10-10 13:41:41] 2025-10-10 17:41:03,815 | INFO     | all data control threads have been joined
[2025-10-10 13:41:41] 2025-10-10 17:41:03,996 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 13:41:41] 2025-10-10 17:41:03,996 | INFO     | aborting loop
[2025-10-10 13:41:41] 2025-10-10 17:41:04,223 | INFO     | all payload control threads have been joined
[2025-10-10 13:41:41] 2025-10-10 17:41:04,456 | INFO     | [job] retrieve thread has finished
[2025-10-10 13:41:41] 2025-10-10 17:41:04,459 | INFO     | [job] queue monitor thread has finished
[2025-10-10 13:41:41] 2025-10-10 17:41:04,795 | INFO     | [job] control thread has finished
[2025-10-10 13:41:41] 2025-10-10 17:41:04,820 | INFO     | [data] control thread has finished
[2025-10-10 13:41:41] 2025-10-10 17:41:04,969 | INFO     | [payload] failed_post thread has finished
[2025-10-10 13:41:41] 2025-10-10 17:41:05,002 | INFO     | [job] job monitor thread has finished
[2025-10-10 13:41:41] 2025-10-10 17:41:05,229 | INFO     | [payload] control thread has finished
[2025-10-10 13:41:41] 2025-10-10 17:41:05,232 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 13:41:41] 2025-10-10 17:41:05,409 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 13:41:41] 2025-10-10 17:41:05,410 | INFO     | [data] copytool_in thread has finished
[2025-10-10 13:41:41] 2025-10-10 17:41:05,412 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 13:41:41] 2025-10-10 17:41:05,416 | INFO     | [job] validate thread has finished
[2025-10-10 13:41:41] 2025-10-10 17:41:05,461 | INFO     | [data] copytool_out thread has finished
[2025-10-10 13:41:41] 2025-10-10 17:41:05,649 | INFO     | [payload] validate_post thread has finished
[2025-10-10 13:41:41] 2025-10-10 17:41:05,851 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 13:41:41] 2025-10-10 17:41:07,654 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 13:41:41] 2025-10-10 17:41:33,126 | INFO     | PID=30749 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 13:41:41] 2025-10-10 17:41:33,126 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 13:41:41] 2025-10-10 17:41:33,127 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 13:41:41] 2025-10-10 17:41:33,127 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 13:41:41] 2025-10-10 17:41:36,179 | INFO     | [monitor] cgroup control has ended
[2025-10-10 13:41:41] 2025-10-10 17:41:36,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140690304776000)>', '<ExcThread(monitor, started 140689337726720)>']
[2025-10-10 13:41:41] 2025-10-10 17:41:37,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 13:41:41] 2025-10-10 17:41:37,147 | INFO     | [monitor] control thread has ended
[2025-10-10 13:41:41] 2025-10-10 17:41:41,313 | INFO     | all workflow threads have been joined
[2025-10-10 13:41:41] 2025-10-10 17:41:41,314 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 13:41:41] 2025-10-10 17:41:41,314 | INFO     | traces error code: 0
[2025-10-10 13:41:41] 2025-10-10 17:41:41,314 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 13:41:41] 2025-10-10 17:41:41,435 [wrapper] ==== pilot stdout END ====
[2025-10-10 13:41:41] 2025-10-10 17:41:41,440 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 13:41:41] 2025-10-10 17:41:41,445 [wrapper] pilotpid: 30749
[2025-10-10 13:41:41] 2025-10-10 17:41:41,450 [wrapper] Pilot exit status: 0
[2025-10-10 13:41:41] 2025-10-10 17:41:41,468 [wrapper] pandaids: 6837454991
[2025-10-10 13:41:41] 2025-10-10 17:41:41,517 [wrapper] cleanup supervisor_pilot 11738 30750
[2025-10-10 13:41:41] 2025-10-10 17:41:41,522 [wrapper] Test setup, not cleaning
[2025-10-10 13:41:41] 2025-10-10 17:41:41,527 [wrapper] apfmon messages muted
[2025-10-10 13:41:41] 2025-10-10 17:41:41,531 [wrapper] ==== wrapper stdout END ====
[2025-10-10 13:41:41] 2025-10-10 17:41:41,536 [wrapper] ==== wrapper stderr END ====
[2025-10-10 13:41:41]  *** Error codes and diagnostics ***
[2025-10-10 13:41:41]     "exeErrorCode": 0,
[2025-10-10 13:41:41]     "exeErrorDiag": "",
[2025-10-10 13:41:41]     "pilotErrorCode": 0,
[2025-10-10 13:41:41]     "pilotErrorDiag": "",
[2025-10-10 13:41:41]  *** Listing of results directory ***
[2025-10-10 13:41:41] total 404588
[2025-10-10 13:41:41] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 02:35 pilot3.tar.gz
[2025-10-10 13:41:41] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 02:38 queuedata.json
[2025-10-10 13:41:41] -rwx------ 1 boincer umatlas     36292 Oct 10 02:39 runpilot2-wrapper.sh
[2025-10-10 13:41:41] -rw-r--r-- 1 boincer umatlas       100 Oct 10 11:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 13:41:41] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 11:40 run_atlas
[2025-10-10 13:41:41] -rw-r--r-- 1 boincer umatlas       105 Oct 10 11:40 job.xml
[2025-10-10 13:41:41] -rw-r--r-- 2 boincer umatlas 217493696 Oct 10 11:40 EVNT.46676267._001378.pool.root.1
[2025-10-10 13:41:41] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 11:40 start_atlas.sh
[2025-10-10 13:41:41] drwxrwx--x 2 boincer umatlas      4096 Oct 10 11:40 shared
[2025-10-10 13:41:41] -rw-r--r-- 2 boincer umatlas    569682 Oct 10 11:40 input.tar.gz
[2025-10-10 13:41:41] -rw-r--r-- 1 boincer umatlas         0 Oct 10 11:40 boinc_lockfile
[2025-10-10 13:41:41] -rw-r--r-- 1 boincer umatlas      2550 Oct 10 11:40 pandaJob.out
[2025-10-10 13:41:41] -rw------- 1 boincer umatlas    975533 Oct 10 11:40 agis_schedconf.cvmfs.json
[2025-10-10 13:41:41] -rw------- 1 boincer umatlas   1560580 Oct 10 11:40 agis_ddmendpoints.agis.ALL.json
[2025-10-10 13:41:41] drwx------ 5 boincer umatlas      4096 Oct 10 11:40 pilot3
[2025-10-10 13:41:41] -rw-r--r-- 1 boincer umatlas      5909 Oct 10 13:39 init_data.xml
[2025-10-10 13:41:41] -rw------- 1 boincer umatlas 190137866 Oct 10 13:40 HITS.46676269._033862.pool.root.1
[2025-10-10 13:41:41] -rw-r--r-- 1 boincer umatlas       529 Oct 10 13:40 boinc_task_state.xml
[2025-10-10 13:41:41] -rw------- 1 boincer umatlas      1050 Oct 10 13:40 memory_monitor_summary.json
[2025-10-10 13:41:41] -rw------- 1 boincer umatlas    361105 Oct 10 13:40 log.46676269._033862.job.log.tgz.1
[2025-10-10 13:41:41] -rw------- 1 boincer umatlas      7849 Oct 10 13:41 heartbeat.json
[2025-10-10 13:41:41] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 13:41 boinc_mmap_file
[2025-10-10 13:41:41] -rw-r--r-- 1 boincer umatlas        27 Oct 10 13:41 wrapper_checkpoint.txt
[2025-10-10 13:41:41] -rw------- 1 boincer umatlas        95 Oct 10 13:41 pilot_heartbeat.json
[2025-10-10 13:41:41] -rw------- 1 boincer umatlas      4746 Oct 10 13:41 pilotlog.txt
[2025-10-10 13:41:41] -rw------- 1 boincer umatlas   1017922 Oct 10 13:41 log.46676269._033862.job.log.1
[2025-10-10 13:41:41] -rw------- 1 boincer umatlas       357 Oct 10 13:41 output.list
[2025-10-10 13:41:41] -rw-r--r-- 1 boincer umatlas       620 Oct 10 13:41 runtime_log
[2025-10-10 13:41:41] -rw------- 1 boincer umatlas   1402880 Oct 10 13:41 result.tar.gz
[2025-10-10 13:41:41] -rw-r--r-- 1 boincer umatlas      8703 Oct 10 13:41 runtime_log.err
[2025-10-10 13:41:41] -rw------- 1 boincer umatlas       659 Oct 10 13:41 hcSKDm0xLR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLccNDmXdsZpm.diag
[2025-10-10 13:41:41] -rw-r--r-- 1 boincer umatlas     21140 Oct 10 13:41 stderr.txt
[2025-10-10 13:41:41] HITS file was successfully produced:
[2025-10-10 13:41:41] -rw------- 1 boincer umatlas 190137866 Oct 10 13:40 shared/HITS.pool.root.1
[2025-10-10 13:41:41]  *** Contents of shared directory: ***
[2025-10-10 13:41:41] total 400032
[2025-10-10 13:41:41] -rw-r--r-- 2 boincer umatlas 217493696 Oct 10 11:40 ATLAS.root_0
[2025-10-10 13:41:41] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 11:40 start_atlas.sh
[2025-10-10 13:41:41] -rw-r--r-- 2 boincer umatlas    569682 Oct 10 11:40 input.tar.gz
[2025-10-10 13:41:41] -rw------- 1 boincer umatlas 190137866 Oct 10 13:40 HITS.pool.root.1
[2025-10-10 13:41:41] -rw------- 1 boincer umatlas   1402880 Oct 10 13:41 result.tar.gz
13:41:42 (27062): run_atlas exited; CPU time 53332.035189
13:41:42 (27062): called boinc_finish(0)

</stderr_txt>
]]>

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