Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:25:02 (1193640): wrapper (7.7.26015): starting
10:25:02 (1193640): wrapper: running run_atlas (--nthreads 3)
[2025-10-11 10:25:02] Arguments: --nthreads 3
[2025-10-11 10:25:02] Threads: 3
[2025-10-11 10:25:02] Checking for CVMFS
[2025-10-11 10:25:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 10:25:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 10:25:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 10:25:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 10:25:02] 2.9.2.0 823243 1037 64900 151577 2 57 4352285 36864000 0 130560 0 750034 99.990 38621 644 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-11 10:25:02] CVMFS is ok
[2025-10-11 10:25:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 10:25:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 10:25:02] Further information can be found at the LHC@home message board.
[2025-10-11 10:25:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 10:25:02] Checking for apptainer binary...
[2025-10-11 10:25:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 10:25:02] Running /usr/bin/apptainer --version
[2025-10-11 10:25:02] apptainer version 1.4.1-1.1
[2025-10-11 10:25:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 10:25:02] thA363a
[2025-10-11 10:25:02] apptainer works
[2025-10-11 10:25:02] Set ATHENA_PROC_NUMBER=3
[2025-10-11 10:25:02] Set ATHENA_CORE_NUMBER=3
[2025-10-11 10:25:02] Starting ATLAS job with PandaID=6837450273
[2025-10-11 10:25:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 11:55:22]  *** The last 200 lines of the pilot log: ***
[2025-10-11 11:55:22] 2025-10-11 09:54:40,699 | INFO     | stage-out finished correctly
[2025-10-11 11:55:22] 2025-10-11 09:54:41,339 | WARNING  | process 1203797 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 11:55:22] 2025-10-11 09:54:41,339 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6837450273/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 11:55:22] 2025-10-11 09:54:41,340 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6837450273/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 11:55:22] 2025-10-11 09:54:41,340 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-11 11:55:22] 2025-10-11 09:54:41,340 | WARNING  | maxPSS not found in memory monitor output
[2025-10-11 11:55:22] 2025-10-11 09:54:41,340 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 1853575 B
[2025-10-11 11:55:22] 2025-10-11 09:54:41,340 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15552 B
[2025-10-11 11:55:22] 2025-10-11 09:54:41,340 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-11 11:55:22] 2025-10-11 09:54:41,351 | INFO     | sufficient remaining disk space (255130075136 B)
[2025-10-11 11:55:22] 2025-10-11 09:54:41,351 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-11 11:55:22] 2025-10-11 09:54:41,351 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6837450273: 2158708 B (within 2537553920 B limit)
[2025-10-11 11:55:22] 2025-10-11 09:54:41,352 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6837450273/HITS.46676269._033279.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-11 11:55:22] 2025-10-11 09:54:41,352 | INFO     | total size of present files: 0 B (workdir size: 2158708 B)
[2025-10-11 11:55:22] 2025-10-11 09:54:41,352 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6837450273/HITS.46676269._033279.pool.root.1 since it does not exist
[2025-10-11 11:55:22] 2025-10-11 09:54:41,406 | INFO     | number of running child processes to parent process 1203797: 1
[2025-10-11 11:55:22] 2025-10-11 09:54:41,406 | INFO     | maximum number of monitored processes: 6
[2025-10-11 11:55:22] 2025-10-11 09:54:42,216 | INFO     | time since job start (5374s) is within the limit (172800.0s)
[2025-10-11 11:55:22] 2025-10-11 09:54:42,465 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 11:55:22] 2025-10-11 09:54:42,496 | INFO     | job 6837450273 has state=finished
[2025-10-11 11:55:22] 2025-10-11 09:54:42,496 | INFO     | preparing for final server update for job 6837450273 in state='finished'
[2025-10-11 11:55:22] 2025-10-11 09:54:42,496 | INFO     | this job has now completed (state=finished)
[2025-10-11 11:55:22] 2025-10-11 09:54:42,497 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 11:55:22] 2025-10-11 09:54:42,497 | INFO     | log transfer has been attempted: DONE
[2025-10-11 11:55:22] 2025-10-11 09:54:42,497 | INFO     | job 6837450273 has finished - writing final server update
[2025-10-11 11:55:22] 2025-10-11 09:54:42,497 | INFO     | total number of processed events: 400 (read)
[2025-10-11 11:55:22] 2025-10-11 09:54:42,497 | INFO     | executing command: lscpu
[2025-10-11 11:55:22] 2025-10-11 09:54:42,511 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 11:55:22] 2025-10-11 09:54:43,910 | INFO     | monitor loop #412: job 0:6837450273 is in state 'finished'
[2025-10-11 11:55:22] 2025-10-11 09:54:43,910 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 11:55:22] 2025-10-11 09:54:44,222 | INFO     | time since job start (5376s) is within the limit (172800.0s)
[2025-10-11 11:55:22] 2025-10-11 09:54:45,310 | INFO     | PID=1197368 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 11:55:22] 2025-10-11 09:54:46,310 | INFO     | time since job start (5378s) is within the limit (172800.0s)
[2025-10-11 11:55:22] 2025-10-11 09:54:46,412 | INFO     | monitor loop #413: job 0:6837450273 is in state 'finished'
[2025-10-11 11:55:22] 2025-10-11 09:54:46,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 11:55:22] 2025-10-11 09:54:47,588 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 11:55:22] 2025-10-11 09:54:47,589 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3845.489083333334
[2025-10-11 11:55:22] 2025-10-11 09:54:47,590 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6837450273/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 11:55:22] 2025-10-11 09:54:47,590 | INFO     | extracted standard info from prmon json
[2025-10-11 11:55:22] 2025-10-11 09:54:47,590 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 11:55:22] 2025-10-11 09:54:47,590 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 11:55:22] 2025-10-11 09:54:47,590 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 11:55:22] 2025-10-11 09:54:47,590 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 11:55:22] 2025-10-11 09:54:47,591 | INFO     | fitting pss+swap vs Time
[2025-10-11 11:55:22] 2025-10-11 09:54:47,591 | INFO     | sum of square deviations: 164765880.0
[2025-10-11 11:55:22] 2025-10-11 09:54:47,591 | INFO     | sum of deviations: -11082485855.999998
[2025-10-11 11:55:22] 2025-10-11 09:54:47,591 | INFO     | mean x: 1760173873.0
[2025-10-11 11:55:22] 2025-10-11 09:54:47,591 | INFO     | mean y: 2415758.765432099
[2025-10-11 11:55:22] 2025-10-11 09:54:47,591 | INFO     | -- intersect: 118395265368.30374
[2025-10-11 11:55:22] 2025-10-11 09:54:47,591 | INFO     | intersect: 118395265368.30374
[2025-10-11 11:55:22] 2025-10-11 09:54:47,591 | INFO     | chi2: 0.07707741793060897
[2025-10-11 11:55:22] 2025-10-11 09:54:47,592 | INFO     | -- intersect: 118395265368.30374
[2025-10-11 11:55:22] 2025-10-11 09:54:47,592 | INFO     | current memory leak: -67.26 B/s (using 81 data points, chi2=0.08)
[2025-10-11 11:55:22] 2025-10-11 09:54:47,592 | INFO     | could have reported an average CPU frequency of 3975 MHz (6 samples)
[2025-10-11 11:55:22] 2025-10-11 09:54:47,592 | INFO     | ..............................
[2025-10-11 11:55:22] 2025-10-11 09:54:47,592 | INFO     | . Timing measurements:
[2025-10-11 11:55:22] 2025-10-11 09:54:47,592 | INFO     | . get job = 0 s
[2025-10-11 11:55:22] 2025-10-11 09:54:47,592 | INFO     | . initial setup = 1 s
[2025-10-11 11:55:22] 2025-10-11 09:54:47,592 | INFO     | . payload setup = 2 s
[2025-10-11 11:55:22] 2025-10-11 09:54:47,592 | INFO     | . stage-in = 0 s
[2025-10-11 11:55:22] 2025-10-11 09:54:47,592 | INFO     | . payload execution = 5352 s
[2025-10-11 11:55:22] 2025-10-11 09:54:47,592 | INFO     | . stage-out = 0 s
[2025-10-11 11:55:22] 2025-10-11 09:54:47,592 | INFO     | . log creation = 0 s
[2025-10-11 11:55:22] 2025-10-11 09:54:47,592 | INFO     | ..............................
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | 
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | job summary report
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | --------------------------------------------------
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | PanDA job id: 6837450273
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | task id: 46676269
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | errors: (none)
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | pilot state: finished 
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | transexitcode: 0
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | exeerrorcode: 0
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | exeerrordiag: 
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | exitcode: 0
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | exitmsg: OK
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | cpuconsumptiontime: 15399 s
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | nevents: 400
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | neventsw: 0
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | pid: 1203797
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | pgrp: 1203797
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | corecount: 3
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | event service: False
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | sizes: {0: 2348860, 2: 2349122, 11: 2349150, 5358: 2375835, 5359: 2384839, 5360: 2384923, 5366: 2385245}
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | --------------------------------------------------
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | 
[2025-10-11 11:55:22] 2025-10-11 09:54:47,629 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-11 11:55:22] 2025-10-11 09:54:47,642 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 11:55:22] 2025-10-11 09:54:47,642 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 11:55:22] 2025-10-11 09:54:47,642 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 11:55:22] 2025-10-11 09:54:47,643 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 11:55:22] 2025-10-11 09:54:47,643 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 11:55:22] 2025-10-11 09:54:47,643 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 11:55:22] 2025-10-11 09:54:47,643 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 11:55:22] 2025-10-11 09:54:47,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 11:55:22] 2025-10-11 09:54:47,643 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 11:55:22] 2025-10-11 09:54:47,643 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 11:55:22] 2025-10-11 09:54:47,643 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 11:55:22] 2025-10-11 09:54:47,643 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 11:55:22] 2025-10-11 09:54:47,643 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 11:55:22] 2025-10-11 09:54:47,643 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 11:55:22] 2025-10-11 09:54:47,643 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 11:55:22] 2025-10-11 09:54:47,643 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 11:55:22] 2025-10-11 09:54:47,643 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 11:55:22] 2025-10-11 09:54:47,643 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 11:55:22] 2025-10-11 09:54:47,643 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 11:55:22] 2025-10-11 09:54:47,643 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 11:55:22] 2025-10-11 09:54:47,643 | INFO     | job 6837450273 has completed (purged errors)
[2025-10-11 11:55:22] 2025-10-11 09:54:47,643 | INFO     | overall cleanup function is called
[2025-10-11 11:55:22] 2025-10-11 09:54:48,649 | INFO     | --- collectZombieJob: --- 10, [1203797]
[2025-10-11 11:55:22] 2025-10-11 09:54:48,649 | INFO     | zombie collector waiting for pid 1203797
[2025-10-11 11:55:22] 2025-10-11 09:54:48,649 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 11:55:22] 2025-10-11 09:54:48,649 | INFO     | collected zombie processes
[2025-10-11 11:55:22] 2025-10-11 09:54:48,649 | INFO     | will attempt to kill all subprocesses of pid=1203797
[2025-10-11 11:55:22] 2025-10-11 09:54:48,709 | INFO     | process IDs to be killed: [1203797] (in reverse order)
[2025-10-11 11:55:22] 2025-10-11 09:54:48,737 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 11:55:22] 2025-10-11 09:54:48,737 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 11:55:22] 2025-10-11 09:54:48,739 | INFO     | did not find any defunct processes belonging to 1203797
[2025-10-11 11:55:22] 2025-10-11 09:54:48,741 | INFO     | did not find any defunct processes belonging to 1203797
[2025-10-11 11:55:22] 2025-10-11 09:54:48,741 | INFO     | ready for new job
[2025-10-11 11:55:22] 2025-10-11 09:54:48,741 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 11:55:22] 2025-10-11 09:54:48,741 | INFO     | ***************************************
[2025-10-11 11:55:22] 2025-10-11 09:54:48,742 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 11:55:22] 2025-10-11 09:54:48,742 | INFO     | ***************************************
[2025-10-11 11:55:22] 2025-10-11 09:54:48,742 | INFO     | 
[2025-10-11 11:55:22] 2025-10-11 09:54:48,742 | INFO     | architecture information:
[2025-10-11 11:55:22] 2025-10-11 09:54:48,742 | INFO     | executing command: cat /etc/os-release
[2025-10-11 11:55:22] 2025-10-11 09:54:48,751 | INFO     | cat /etc/os-release:
[2025-10-11 11:55:22] NAME="CentOS Linux"
[2025-10-11 11:55:22] VERSION="7 (Core)"
[2025-10-11 11:55:22] ID="centos"
[2025-10-11 11:55:22] ID_LIKE="rhel fedora"
[2025-10-11 11:55:22] VERSION_ID="7"
[2025-10-11 11:55:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 11:55:22] ANSI_COLOR="0;31"
[2025-10-11 11:55:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 11:55:22] HOME_URL="https://www.centos.org/"
[2025-10-11 11:55:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 11:55:22] 
[2025-10-11 11:55:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 11:55:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 11:55:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 11:55:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 11:55:22] 
[2025-10-11 11:55:22] 2025-10-11 09:54:48,752 | INFO     | ***************************************
[2025-10-11 11:55:22] 2025-10-11 09:54:49,254 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-11 11:55:22] 2025-10-11 09:54:49,264 | INFO     | sufficient remaining disk space (255133220864 B)
[2025-10-11 11:55:22] 2025-10-11 09:54:49,265 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 11:55:22] 2025-10-11 09:54:49,265 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 11:55:22] 2025-10-11 09:54:49,265 | INFO     | update_server=False
[2025-10-11 11:55:22] 2025-10-11 09:54:49,265 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 11:55:22] 2025-10-11 09:54:49,265 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 11:55:22] 2025-10-11 09:54:49,265 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:55:22] 2025-10-11 09:54:49,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 11:55:22] 2025-10-11 09:54:49,831 | INFO     | all data control threads have been joined
[2025-10-11 11:55:22] 2025-10-11 09:54:49,921 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:55:22] 2025-10-11 09:54:49,921 | INFO     | aborting loop
[2025-10-11 11:55:22] 2025-10-11 09:54:49,922 | INFO     | all payload control threads have been joined
[2025-10-11 11:55:22] 2025-10-11 09:54:50,133 | INFO     | all job control threads have been joined
[2025-10-11 11:55:22] 2025-10-11 09:54:50,270 | INFO     | [job] retrieve thread has finished
[2025-10-11 11:55:22] 2025-10-11 09:54:50,270 | INFO     | [job] queue monitor thread has finished
[2025-10-11 11:55:22] 2025-10-11 09:54:50,299 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 11:55:22] 2025-10-11 09:54:50,391 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 11:55:22] 2025-10-11 09:54:50,443 | INFO     | [payload] failed_post thread has finished
[2025-10-11 11:55:22] 2025-10-11 09:54:50,837 | INFO     | [data] control thread has finished
[2025-10-11 11:55:22] 2025-10-11 09:54:50,926 | INFO     | [job] job monitor thread has finished
[2025-10-11 11:55:22] 2025-10-11 09:54:50,928 | INFO     | [payload] control thread has finished
[2025-10-11 11:55:22] 2025-10-11 09:54:51,023 | INFO     | [payload] validate_post thread has finished
[2025-10-11 11:55:22] 2025-10-11 09:54:51,138 | INFO     | [job] control thread has finished
[2025-10-11 11:55:22] 2025-10-11 09:54:51,145 | INFO     | [data] copytool_in thread has finished
[2025-10-11 11:55:22] 2025-10-11 09:54:51,271 | INFO     | [data] copytool_out thread has finished
[2025-10-11 11:55:22] 2025-10-11 09:54:51,613 | INFO     | [job] validate thread has finished
[2025-10-11 11:55:22] 2025-10-11 09:54:51,687 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 11:55:22] 2025-10-11 09:54:53,271 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 11:55:22] 2025-10-11 09:54:59,950 | INFO     | job.realtimelogging is not enabled
[2025-10-11 11:55:22] 2025-10-11 09:55:00,955 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 11:55:22] 2025-10-11 09:55:06,968 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-10-11 11:55:22] 2025-10-11 09:55:15,795 | INFO     | [monitor] cgroup control has ended
[2025-10-11 11:55:22] 2025-10-11 09:55:17,689 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140110938634048)>', '<ExcThread(monitor, started 140110221801216)>']
[2025-10-11 11:55:22] 2025-10-11 09:55:19,490 | INFO     | PID=1197368 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 11:55:22] 2025-10-11 09:55:19,491 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 11:55:22] 2025-10-11 09:55:19,491 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 11:55:22] 2025-10-11 09:55:19,491 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 11:55:22] 2025-10-11 09:55:19,491 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 11:55:22] 2025-10-11 09:55:19,491 | INFO     | [monitor] control thread has ended
[2025-10-11 11:55:22] 2025-10-11 09:55:22,714 | INFO     | all workflow threads have been joined
[2025-10-11 11:55:22] 2025-10-11 09:55:22,714 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 11:55:22] 2025-10-11 09:55:22,714 | INFO     | traces error code: 0
[2025-10-11 11:55:22] 2025-10-11 09:55:22,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 11:55:22] 2025-10-11 09:55:22,767 [wrapper] ==== pilot stdout END ====
[2025-10-11 11:55:22] 2025-10-11 09:55:22,769 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 11:55:22] 2025-10-11 09:55:22,772 [wrapper] pilotpid: 1197368
[2025-10-11 11:55:22] 2025-10-11 09:55:22,774 [wrapper] Pilot exit status: 0
[2025-10-11 11:55:22] 2025-10-11 09:55:22,781 [wrapper] pandaids: 6837450273
[2025-10-11 11:55:22] 2025-10-11 09:55:22,799 [wrapper] cleanup supervisor_pilot 1218838 1197369
[2025-10-11 11:55:22] 2025-10-11 09:55:22,801 [wrapper] Test setup, not cleaning
[2025-10-11 11:55:22] 2025-10-11 09:55:22,804 [wrapper] apfmon messages muted
[2025-10-11 11:55:22] 2025-10-11 09:55:22,806 [wrapper] ==== wrapper stdout END ====
[2025-10-11 11:55:22] 2025-10-11 09:55:22,808 [wrapper] ==== wrapper stderr END ====
[2025-10-11 11:55:22]  *** Error codes and diagnostics ***
[2025-10-11 11:55:22]     "exeErrorCode": 0,
[2025-10-11 11:55:22]     "exeErrorDiag": "",
[2025-10-11 11:55:22]     "pilotErrorCode": 0,
[2025-10-11 11:55:22]     "pilotErrorDiag": "",
[2025-10-11 11:55:22]  *** Listing of results directory ***
[2025-10-11 11:55:22] total 413424
[2025-10-11 11:55:22] -rw-r--r-- 1 boinc boinc    557409 Oct 10 07:42 pilot3.tar.gz
[2025-10-11 11:55:22] -rw-r--r-- 1 boinc boinc      5112 Oct 10 07:45 queuedata.json
[2025-10-11 11:55:22] -rwx------ 1 boinc boinc     36292 Oct 10 07:46 runpilot2-wrapper.sh
[2025-10-11 11:55:22] -rw-r--r-- 1 boinc boinc       100 Oct 11 10:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 11:55:22] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 10:25 run_atlas
[2025-10-11 11:55:22] -rw-r--r-- 1 boinc boinc       105 Oct 11 10:25 job.xml
[2025-10-11 11:55:22] -rw-r--r-- 2 boinc boinc 219726141 Oct 11 10:25 EVNT.46676267._001355.pool.root.1
[2025-10-11 11:55:22] drwxrwx--x 2 boinc boinc      4096 Oct 11 10:25 shared
[2025-10-11 11:55:22] -rw-r--r-- 2 boinc boinc    569681 Oct 11 10:25 input.tar.gz
[2025-10-11 11:55:22] -rw-r--r-- 2 boinc boinc     15120 Oct 11 10:25 start_atlas.sh
[2025-10-11 11:55:22] -rw-r--r-- 1 boinc boinc         0 Oct 11 10:25 boinc_setup_complete
[2025-10-11 11:55:22] -rw-r--r-- 1 boinc boinc      6437 Oct 11 10:25 init_data.xml
[2025-10-11 11:55:22] -rw-r--r-- 1 boinc boinc         0 Oct 11 10:25 boinc_lockfile
[2025-10-11 11:55:22] -rw-r--r-- 1 boinc boinc      2550 Oct 11 10:25 pandaJob.out
[2025-10-11 11:55:22] -rw------- 1 boinc boinc    975509 Oct 11 10:25 agis_schedconf.cvmfs.json
[2025-10-11 11:55:22] -rw------- 1 boinc boinc   1560580 Oct 11 10:25 agis_ddmendpoints.agis.ALL.json
[2025-10-11 11:55:22] drwx------ 5 boinc boinc      4096 Oct 11 10:25 pilot3
[2025-10-11 11:55:22] -rw------- 1 boinc boinc 197638073 Oct 11 11:54 HITS.46676269._033279.pool.root.1
[2025-10-11 11:55:22] -rw-r--r-- 1 boinc boinc       529 Oct 11 11:54 boinc_task_state.xml
[2025-10-11 11:55:22] -rw------- 1 boinc boinc      1051 Oct 11 11:54 memory_monitor_summary.json
[2025-10-11 11:55:22] -rw------- 1 boinc boinc        95 Oct 11 11:54 pilot_heartbeat.json
[2025-10-11 11:55:22] -rw------- 1 boinc boinc    253344 Oct 11 11:54 log.46676269._033279.job.log.tgz.1
[2025-10-11 11:55:22] -rw------- 1 boinc boinc      7809 Oct 11 11:54 heartbeat.json
[2025-10-11 11:55:22] -rw-r--r-- 1 boinc boinc      8192 Oct 11 11:55 boinc_mmap_file
[2025-10-11 11:55:22] -rw-r--r-- 1 boinc boinc        27 Oct 11 11:55 wrapper_checkpoint.txt
[2025-10-11 11:55:22] -rw------- 1 boinc boinc      4824 Oct 11 11:55 pilotlog.txt
[2025-10-11 11:55:22] -rw------- 1 boinc boinc    784101 Oct 11 11:55 log.46676269._033279.job.log.1
[2025-10-11 11:55:22] -rw------- 1 boinc boinc       357 Oct 11 11:55 output.list
[2025-10-11 11:55:22] -rw-r--r-- 1 boinc boinc       620 Oct 11 11:55 runtime_log
[2025-10-11 11:55:22] -rw------- 1 boinc boinc   1054720 Oct 11 11:55 result.tar.gz
[2025-10-11 11:55:22] -rw-r--r-- 1 boinc boinc      8782 Oct 11 11:55 runtime_log.err
[2025-10-11 11:55:22] -rw------- 1 boinc boinc       665 Oct 11 11:55 WF2MDmI8KR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmwPPMDmCkCidn.diag
[2025-10-11 11:55:22] -rw-r--r-- 1 boinc boinc     22482 Oct 11 11:55 stderr.txt
[2025-10-11 11:55:22] HITS file was successfully produced:
[2025-10-11 11:55:22] -rw------- 1 boinc boinc 197638073 Oct 11 11:54 shared/HITS.pool.root.1
[2025-10-11 11:55:22]  *** Contents of shared directory: ***
[2025-10-11 11:55:22] total 409204
[2025-10-11 11:55:22] -rw-r--r-- 2 boinc boinc 219726141 Oct 11 10:25 ATLAS.root_0
[2025-10-11 11:55:22] -rw-r--r-- 2 boinc boinc    569681 Oct 11 10:25 input.tar.gz
[2025-10-11 11:55:22] -rw-r--r-- 2 boinc boinc     15120 Oct 11 10:25 start_atlas.sh
[2025-10-11 11:55:22] -rw------- 1 boinc boinc 197638073 Oct 11 11:54 HITS.pool.root.1
[2025-10-11 11:55:22] -rw------- 1 boinc boinc   1054720 Oct 11 11:55 result.tar.gz
11:55:23 (1193640): run_atlas exited; CPU time 15222.445665
11:55:23 (1193640): called boinc_finish(0)

</stderr_txt>
]]>

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