Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:11:44 (12019): wrapper (7.7.26015): starting
11:11:44 (12019): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 11:11:44] Arguments: --nthreads 8
[2025-10-10 11:11:44] Threads: 8
[2025-10-10 11:11:44] Checking for CVMFS
[2025-10-10 11:11:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 11:11:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 11:11:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 11:11:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 11:11:45] 2.11.2.0 2864 11632 79188 151550 0 56 11578963 20275201 1 130560 0 8157929 99.990 383908 38975 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 11:11:45] CVMFS is ok
[2025-10-10 11:11:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 11:11:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 11:11:45] Further information can be found at the LHC@home message board.
[2025-10-10 11:11:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 11:11:45] Checking for apptainer binary...
[2025-10-10 11:11:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 11:11:45] Running /usr/bin/apptainer --version
[2025-10-10 11:11:45] apptainer version 1.3.2-1.el7
[2025-10-10 11:11:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 11:11:47] c-115-17.aglt2.org
[2025-10-10 11:11:47] apptainer works
[2025-10-10 11:11:47] Set ATHENA_PROC_NUMBER=8
[2025-10-10 11:11:47] Set ATHENA_CORE_NUMBER=8
[2025-10-10 11:11:47] Starting ATLAS job with PandaID=6832673534
[2025-10-10 11:11:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 12:48:19]  *** The last 200 lines of the pilot log: ***
[2025-10-10 12:48:19]  scope=mc23_13p6TeV
[2025-10-10 12:48:19]  status=None
[2025-10-10 12:48:19]  status_code=0
[2025-10-10 12:48:19]  storage_token=
[2025-10-10 12:48:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6832673534/log.46376905._111522.job.log.tgz.1
[2025-10-10 12:48:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/63/89/log.46376905._111522.job.log.tgz.1
[2025-10-10 12:48:19]  workdir=None
[2025-10-10 12:48:19] ]
[2025-10-10 12:48:19] 2025-10-10 16:47:04,646 | INFO     | transferring file log.46376905._111522.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6832673534/log.46376905._111522.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-10 12:48:19] 2025-10-10 16:47:04,646 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6832673534/log.46376905._111522.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._111522.job
[2025-10-10 12:48:19] 2025-10-10 16:47:04,671 | INFO     | adding to output.list: log.46376905._111522.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/63/89/log.46376905._111522.job.log.tg
[2025-10-10 12:48:19] 2025-10-10 16:47:04,672 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 12:48:19] 2025-10-10 16:47:04,673 | INFO     | summary of transferred files:
[2025-10-10 12:48:19] 2025-10-10 16:47:04,673 | INFO     |  -- lfn=log.46376905._111522.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 12:48:19] 2025-10-10 16:47:04,673 | INFO     | stage-out finished correctly
[2025-10-10 12:48:19] 2025-10-10 16:47:06,025 | INFO     | monitor loop #423: job 0:6832673534 is in state 'finished'
[2025-10-10 12:48:19] 2025-10-10 16:47:06,026 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:48:19] 2025-10-10 16:47:06,393 | INFO     | time since job start (5702s) is within the limit (172800.0s)
[2025-10-10 12:48:19] 2025-10-10 16:47:07,368 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 12:48:19] 2025-10-10 16:47:07,451 | INFO     | job 6832673534 has state=finished
[2025-10-10 12:48:19] 2025-10-10 16:47:07,451 | INFO     | preparing for final server update for job 6832673534 in state='finished'
[2025-10-10 12:48:19] 2025-10-10 16:47:07,452 | INFO     | this job has now completed (state=finished)
[2025-10-10 12:48:19] 2025-10-10 16:47:07,452 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 12:48:19] 2025-10-10 16:47:07,453 | INFO     | log transfer has been attempted: DONE
[2025-10-10 12:48:19] 2025-10-10 16:47:07,453 | INFO     | job 6832673534 has finished - writing final server update
[2025-10-10 12:48:19] 2025-10-10 16:47:07,453 | INFO     | total number of processed events: 400 (read)
[2025-10-10 12:48:19] 2025-10-10 16:47:07,456 | INFO     | executing command: lscpu
[2025-10-10 12:48:19] 2025-10-10 16:47:07,487 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 12:48:19] 2025-10-10 16:47:08,400 | INFO     | time since job start (5704s) is within the limit (172800.0s)
[2025-10-10 12:48:19] 2025-10-10 16:47:08,529 | INFO     | monitor loop #424: job 0:6832673534 is in state 'finished'
[2025-10-10 12:48:19] 2025-10-10 16:47:08,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:48:19] 2025-10-10 16:47:10,406 | INFO     | time since job start (5706s) is within the limit (172800.0s)
[2025-10-10 12:48:19] 2025-10-10 16:47:11,032 | INFO     | monitor loop #425: job 0:6832673534 is in state 'finished'
[2025-10-10 12:48:19] 2025-10-10 16:47:11,032 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:48:19] 2025-10-10 16:47:12,411 | INFO     | time since job start (5708s) is within the limit (172800.0s)
[2025-10-10 12:48:19] 2025-10-10 16:47:12,955 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-10 12:48:19] 2025-10-10 16:47:12,959 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-10-10 12:48:19] 2025-10-10 16:47:12,961 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6832673534/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 12:48:19] 2025-10-10 16:47:12,962 | INFO     | extracted standard info from prmon json
[2025-10-10 12:48:19] 2025-10-10 16:47:12,962 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 12:48:19] 2025-10-10 16:47:12,963 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 12:48:19] 2025-10-10 16:47:12,963 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 12:48:19] 2025-10-10 16:47:12,963 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 12:48:19] 2025-10-10 16:47:12,966 | INFO     | fitting pss+swap vs Time
[2025-10-10 12:48:19] 2025-10-10 16:47:12,967 | INFO     | sum of square deviations: 197203697.5
[2025-10-10 12:48:19] 2025-10-10 16:47:12,967 | INFO     | sum of deviations: 398088714.5
[2025-10-10 12:48:19] 2025-10-10 16:47:12,967 | INFO     | mean x: 1760112052.5
[2025-10-10 12:48:19] 2025-10-10 16:47:12,968 | INFO     | mean y: 2509726.61627907
[2025-10-10 12:48:19] 2025-10-10 16:47:12,968 | INFO     | -- intersect: -3550571443.9620843
[2025-10-10 12:48:19] 2025-10-10 16:47:12,968 | INFO     | intersect: -3550571443.9620843
[2025-10-10 12:48:19] 2025-10-10 16:47:12,968 | INFO     | chi2: 0.019571195677373567
[2025-10-10 12:48:19] 2025-10-10 16:47:12,968 | INFO     | -- intersect: -3550571443.9620843
[2025-10-10 12:48:19] 2025-10-10 16:47:12,969 | INFO     | current memory leak: 2.02 B/s (using 86 data points, chi2=0.02)
[2025-10-10 12:48:19] 2025-10-10 16:47:12,969 | INFO     | could have reported an average CPU frequency of 2088 MHz (7 samples)
[2025-10-10 12:48:19] 2025-10-10 16:47:12,969 | INFO     | ..............................
[2025-10-10 12:48:19] 2025-10-10 16:47:12,970 | INFO     | . Timing measurements:
[2025-10-10 12:48:19] 2025-10-10 16:47:12,970 | INFO     | . get job = 0 s
[2025-10-10 12:48:19] 2025-10-10 16:47:12,970 | INFO     | . initial setup = 2 s
[2025-10-10 12:48:19] 2025-10-10 16:47:12,970 | INFO     | . payload setup = 8 s
[2025-10-10 12:48:19] 2025-10-10 16:47:12,970 | INFO     | . stage-in = 0 s
[2025-10-10 12:48:19] 2025-10-10 16:47:12,970 | INFO     | . payload execution = 5669 s
[2025-10-10 12:48:19] 2025-10-10 16:47:12,970 | INFO     | . stage-out = 0 s
[2025-10-10 12:48:19] 2025-10-10 16:47:12,971 | INFO     | . log creation = 0 s
[2025-10-10 12:48:19] 2025-10-10 16:47:12,971 | INFO     | ..............................
[2025-10-10 12:48:19] 2025-10-10 16:47:13,055 | INFO     | 
[2025-10-10 12:48:19] 2025-10-10 16:47:13,055 | INFO     | job summary report
[2025-10-10 12:48:19] 2025-10-10 16:47:13,056 | INFO     | --------------------------------------------------
[2025-10-10 12:48:19] 2025-10-10 16:47:13,056 | INFO     | PanDA job id: 6832673534
[2025-10-10 12:48:19] 2025-10-10 16:47:13,056 | INFO     | task id: 46376905
[2025-10-10 12:48:19] 2025-10-10 16:47:13,056 | INFO     | errors: (none)
[2025-10-10 12:48:19] 2025-10-10 16:47:13,056 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 12:48:19] 2025-10-10 16:47:13,057 | INFO     | pilot state: finished 
[2025-10-10 12:48:19] 2025-10-10 16:47:13,057 | INFO     | transexitcode: 0
[2025-10-10 12:48:19] 2025-10-10 16:47:13,057 | INFO     | exeerrorcode: 0
[2025-10-10 12:48:19] 2025-10-10 16:47:13,057 | INFO     | exeerrordiag: 
[2025-10-10 12:48:19] 2025-10-10 16:47:13,057 | INFO     | exitcode: 0
[2025-10-10 12:48:19] 2025-10-10 16:47:13,057 | INFO     | exitmsg: OK
[2025-10-10 12:48:19] 2025-10-10 16:47:13,058 | INFO     | cpuconsumptiontime: 42038 s
[2025-10-10 12:48:19] 2025-10-10 16:47:13,058 | INFO     | nevents: 400
[2025-10-10 12:48:19] 2025-10-10 16:47:13,058 | INFO     | neventsw: 0
[2025-10-10 12:48:19] 2025-10-10 16:47:13,058 | INFO     | pid: 22197
[2025-10-10 12:48:19] 2025-10-10 16:47:13,058 | INFO     | pgrp: 22197
[2025-10-10 12:48:19] 2025-10-10 16:47:13,058 | INFO     | corecount: 8
[2025-10-10 12:48:19] 2025-10-10 16:47:13,059 | INFO     | event service: False
[2025-10-10 12:48:19] 2025-10-10 16:47:13,059 | INFO     | sizes: {0: 2348813, 1: 2348813, 6: 2349103, 11: 2349131, 5681: 2375743, 5683: 2384741, 5686: 2384925, 5691: 2385119}
[2025-10-10 12:48:19] 2025-10-10 16:47:13,059 | INFO     | --------------------------------------------------
[2025-10-10 12:48:19] 2025-10-10 16:47:13,059 | INFO     | 
[2025-10-10 12:48:19] 2025-10-10 16:47:13,059 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 12:48:19] 2025-10-10 16:47:13,091 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 12:48:19] 2025-10-10 16:47:13,092 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 12:48:19] 2025-10-10 16:47:13,092 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 12:48:19] 2025-10-10 16:47:13,092 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 12:48:19] 2025-10-10 16:47:13,092 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 12:48:19] 2025-10-10 16:47:13,092 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 12:48:19] 2025-10-10 16:47:13,093 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 12:48:19] 2025-10-10 16:47:13,093 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 12:48:19] 2025-10-10 16:47:13,093 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 12:48:19] 2025-10-10 16:47:13,093 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 12:48:19] 2025-10-10 16:47:13,093 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 12:48:19] 2025-10-10 16:47:13,093 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 12:48:19] 2025-10-10 16:47:13,094 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 12:48:19] 2025-10-10 16:47:13,094 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 12:48:19] 2025-10-10 16:47:13,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 12:48:19] 2025-10-10 16:47:13,094 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 12:48:19] 2025-10-10 16:47:13,094 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 12:48:19] 2025-10-10 16:47:13,094 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 12:48:19] 2025-10-10 16:47:13,094 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 12:48:19] 2025-10-10 16:47:13,095 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 12:48:19] 2025-10-10 16:47:13,095 | INFO     | job 6832673534 has completed (purged errors)
[2025-10-10 12:48:19] 2025-10-10 16:47:13,095 | INFO     | overall cleanup function is called
[2025-10-10 12:48:19] 2025-10-10 16:47:13,522 | INFO     | PID=15704 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 12:48:19] 2025-10-10 16:47:14,103 | INFO     | --- collectZombieJob: --- 10, [22197]
[2025-10-10 12:48:19] 2025-10-10 16:47:14,103 | INFO     | zombie collector waiting for pid 22197
[2025-10-10 12:48:19] 2025-10-10 16:47:14,103 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 12:48:19] 2025-10-10 16:47:14,103 | INFO     | collected zombie processes
[2025-10-10 12:48:19] 2025-10-10 16:47:14,104 | INFO     | will attempt to kill all subprocesses of pid=22197
[2025-10-10 12:48:19] 2025-10-10 16:47:14,184 | INFO     | process IDs to be killed: [22197] (in reverse order)
[2025-10-10 12:48:19] 2025-10-10 16:47:14,243 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 12:48:19] 2025-10-10 16:47:14,244 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 12:48:19] 2025-10-10 16:47:14,247 | INFO     | did not find any defunct processes belonging to 22197
[2025-10-10 12:48:19] 2025-10-10 16:47:14,249 | INFO     | did not find any defunct processes belonging to 22197
[2025-10-10 12:48:19] 2025-10-10 16:47:14,249 | INFO     | ready for new job
[2025-10-10 12:48:19] 2025-10-10 16:47:14,250 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 12:48:19] 2025-10-10 16:47:14,251 | INFO     | ***************************************
[2025-10-10 12:48:19] 2025-10-10 16:47:14,251 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 12:48:19] 2025-10-10 16:47:14,251 | INFO     | ***************************************
[2025-10-10 12:48:19] 2025-10-10 16:47:14,251 | INFO     | 
[2025-10-10 12:48:19] 2025-10-10 16:47:14,252 | INFO     | architecture information:
[2025-10-10 12:48:19] 2025-10-10 16:47:14,252 | INFO     | executing command: cat /etc/os-release
[2025-10-10 12:48:19] 2025-10-10 16:47:14,273 | INFO     | cat /etc/os-release:
[2025-10-10 12:48:19] NAME="CentOS Linux"
[2025-10-10 12:48:19] VERSION="7 (Core)"
[2025-10-10 12:48:19] ID="centos"
[2025-10-10 12:48:19] ID_LIKE="rhel fedora"
[2025-10-10 12:48:19] VERSION_ID="7"
[2025-10-10 12:48:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 12:48:19] ANSI_COLOR="0;31"
[2025-10-10 12:48:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 12:48:19] HOME_URL="https://www.centos.org/"
[2025-10-10 12:48:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 12:48:19] 
[2025-10-10 12:48:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 12:48:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 12:48:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 12:48:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 12:48:19] 
[2025-10-10 12:48:19] 2025-10-10 16:47:14,274 | INFO     | ***************************************
[2025-10-10 12:48:19] 2025-10-10 16:47:14,777 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 12:48:19] 2025-10-10 16:47:14,800 | INFO     | sufficient remaining disk space (18622709760 B)
[2025-10-10 12:48:19] 2025-10-10 16:47:14,800 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 12:48:19] 2025-10-10 16:47:14,801 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 12:48:19] 2025-10-10 16:47:14,801 | INFO     | update_server=False
[2025-10-10 12:48:19] 2025-10-10 16:47:14,801 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 12:48:19] 2025-10-10 16:47:14,802 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:48:19] 2025-10-10 16:47:14,802 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:48:19] 2025-10-10 16:47:14,802 | INFO     | aborting loop
[2025-10-10 12:48:19] 2025-10-10 16:47:15,237 | INFO     | all data control threads have been joined
[2025-10-10 12:48:19] 2025-10-10 16:47:15,278 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 12:48:19] 2025-10-10 16:47:15,807 | INFO     | [job] retrieve thread has finished
[2025-10-10 12:48:19] 2025-10-10 16:47:15,808 | INFO     | [job] queue monitor thread has finished
[2025-10-10 12:48:19] 2025-10-10 16:47:15,808 | INFO     | [job] job monitor thread has finished
[2025-10-10 12:48:19] 2025-10-10 16:47:15,816 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 12:48:19] 2025-10-10 16:47:15,837 | INFO     | all payload control threads have been joined
[2025-10-10 12:48:19] 2025-10-10 16:47:16,243 | INFO     | [data] control thread has finished
[2025-10-10 12:48:19] 2025-10-10 16:47:16,456 | INFO     | all job control threads have been joined
[2025-10-10 12:48:19] 2025-10-10 16:47:16,627 | INFO     | [job] validate thread has finished
[2025-10-10 12:48:19] 2025-10-10 16:47:16,699 | INFO     | [payload] validate_post thread has finished
[2025-10-10 12:48:19] 2025-10-10 16:47:16,842 | INFO     | [payload] control thread has finished
[2025-10-10 12:48:19] 2025-10-10 16:47:17,050 | INFO     | [data] copytool_in thread has finished
[2025-10-10 12:48:19] 2025-10-10 16:47:17,050 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 12:48:19] 2025-10-10 16:47:17,056 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 12:48:19] 2025-10-10 16:47:17,283 | INFO     | [data] copytool_out thread has finished
[2025-10-10 12:48:19] 2025-10-10 16:47:17,377 | INFO     | [payload] failed_post thread has finished
[2025-10-10 12:48:19] 2025-10-10 16:47:17,461 | INFO     | [job] control thread has finished
[2025-10-10 12:48:19] 2025-10-10 16:47:17,959 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 12:48:19] 2025-10-10 16:47:21,965 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 12:48:19] 2025-10-10 16:47:25,059 | INFO     | job.realtimelogging is not enabled
[2025-10-10 12:48:19] 2025-10-10 16:47:26,065 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 12:48:19] 2025-10-10 16:47:45,729 | INFO     | PID=15704 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 12:48:19] 2025-10-10 16:47:45,729 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 12:48:19] 2025-10-10 16:47:45,730 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 12:48:19] 2025-10-10 16:47:45,730 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 12:48:19] 2025-10-10 16:48:13,453 | INFO     | [monitor] cgroup control has ended
[2025-10-10 12:48:19] 2025-10-10 16:48:13,937 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140409579272000)>', '<ExcThread(monitor, started 140408319375104)>']
[2025-10-10 12:48:19] 2025-10-10 16:48:14,877 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 12:48:19] 2025-10-10 16:48:14,878 | INFO     | [monitor] control thread has ended
[2025-10-10 12:48:19] 2025-10-10 16:48:18,953 | INFO     | all workflow threads have been joined
[2025-10-10 12:48:19] 2025-10-10 16:48:18,954 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 12:48:19] 2025-10-10 16:48:18,962 | INFO     | traces error code: 0
[2025-10-10 12:48:19] 2025-10-10 16:48:18,963 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 12:48:19] 2025-10-10 16:48:19,074 [wrapper] ==== pilot stdout END ====
[2025-10-10 12:48:19] 2025-10-10 16:48:19,079 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 12:48:19] 2025-10-10 16:48:19,084 [wrapper] pilotpid: 15704
[2025-10-10 12:48:19] 2025-10-10 16:48:19,089 [wrapper] Pilot exit status: 0
[2025-10-10 12:48:19] 2025-10-10 16:48:19,108 [wrapper] pandaids: 6832673534
[2025-10-10 12:48:19] 2025-10-10 16:48:19,161 [wrapper] cleanup supervisor_pilot 16045 15705
[2025-10-10 12:48:19] 2025-10-10 16:48:19,165 [wrapper] Test setup, not cleaning
[2025-10-10 12:48:19] 2025-10-10 16:48:19,170 [wrapper] apfmon messages muted
[2025-10-10 12:48:19] 2025-10-10 16:48:19,175 [wrapper] ==== wrapper stdout END ====
[2025-10-10 12:48:19] 2025-10-10 16:48:19,179 [wrapper] ==== wrapper stderr END ====
[2025-10-10 12:48:19]  *** Error codes and diagnostics ***
[2025-10-10 12:48:19]     "exeErrorCode": 0,
[2025-10-10 12:48:19]     "exeErrorDiag": "",
[2025-10-10 12:48:19]     "pilotErrorCode": 0,
[2025-10-10 12:48:19]     "pilotErrorDiag": "",
[2025-10-10 12:48:19]  *** Listing of results directory ***
[2025-10-10 12:48:19] total 385764
[2025-10-10 12:48:19] -rw-r--r-- 1 boincer umatlas    552446 Oct  6 08:07 pilot3.tar.gz
[2025-10-10 12:48:19] -rw-r--r-- 1 boincer umatlas      5112 Oct  6 08:32 queuedata.json
[2025-10-10 12:48:19] -rwx------ 1 boincer umatlas     36292 Oct  6 08:33 runpilot2-wrapper.sh
[2025-10-10 12:48:19] -rw-r--r-- 1 boincer umatlas       100 Oct 10 11:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 12:48:19] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 11:11 run_atlas
[2025-10-10 12:48:19] -rw-r--r-- 1 boincer umatlas       105 Oct 10 11:11 job.xml
[2025-10-10 12:48:19] -rw-r--r-- 2 boincer umatlas 213852572 Oct 10 11:11 EVNT.46376901._004135.pool.root.1
[2025-10-10 12:48:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 11:11 start_atlas.sh
[2025-10-10 12:48:19] drwxrwx--x 2 boincer umatlas      4096 Oct 10 11:11 shared
[2025-10-10 12:48:19] -rw-r--r-- 2 boincer umatlas    565604 Oct 10 11:11 input.tar.gz
[2025-10-10 12:48:19] -rw-r--r-- 1 boincer umatlas         0 Oct 10 11:11 boinc_lockfile
[2025-10-10 12:48:19] -rw-r--r-- 1 boincer umatlas      2517 Oct 10 11:11 pandaJob.out
[2025-10-10 12:48:19] -rw------- 1 boincer umatlas    975533 Oct 10 11:12 agis_schedconf.cvmfs.json
[2025-10-10 12:48:19] -rw------- 1 boincer umatlas   1560580 Oct 10 11:12 agis_ddmendpoints.agis.ALL.json
[2025-10-10 12:48:19] drwx------ 4 boincer umatlas      4096 Oct 10 11:12 pilot3
[2025-10-10 12:48:19] -rw-r--r-- 1 boincer umatlas      5910 Oct 10 12:40 init_data.xml
[2025-10-10 12:48:19] -rw-r--r-- 1 boincer umatlas       529 Oct 10 12:46 boinc_task_state.xml
[2025-10-10 12:48:19] -rw------- 1 boincer umatlas 175002014 Oct 10 12:46 HITS.46376905._111522.pool.root.1
[2025-10-10 12:48:19] -rw------- 1 boincer umatlas      1048 Oct 10 12:46 memory_monitor_summary.json
[2025-10-10 12:48:19] -rw------- 1 boincer umatlas    325637 Oct 10 12:47 log.46376905._111522.job.log.tgz.1
[2025-10-10 12:48:19] -rw------- 1 boincer umatlas      7838 Oct 10 12:47 heartbeat.json
[2025-10-10 12:48:19] -rw------- 1 boincer umatlas        95 Oct 10 12:47 pilot_heartbeat.json
[2025-10-10 12:48:19] -rw-r--r-- 1 boincer umatlas        27 Oct 10 12:48 wrapper_checkpoint.txt
[2025-10-10 12:48:19] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 12:48 boinc_mmap_file
[2025-10-10 12:48:19] -rw------- 1 boincer umatlas      4818 Oct 10 12:48 pilotlog.txt
[2025-10-10 12:48:19] -rw------- 1 boincer umatlas    810770 Oct 10 12:48 log.46376905._111522.job.log.1
[2025-10-10 12:48:19] -rw------- 1 boincer umatlas       357 Oct 10 12:48 output.list
[2025-10-10 12:48:19] -rw-r--r-- 1 boincer umatlas       620 Oct 10 12:48 runtime_log
[2025-10-10 12:48:19] -rw------- 1 boincer umatlas   1157120 Oct 10 12:48 result.tar.gz
[2025-10-10 12:48:19] -rw-r--r-- 1 boincer umatlas      8703 Oct 10 12:48 runtime_log.err
[2025-10-10 12:48:19] -rw------- 1 boincer umatlas       658 Oct 10 12:48 rAEMDm0ZzP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVWTNDm2t8vfn.diag
[2025-10-10 12:48:19] -rw-r--r-- 1 boincer umatlas     21990 Oct 10 12:48 stderr.txt
[2025-10-10 12:48:19] HITS file was successfully produced:
[2025-10-10 12:48:19] -rw------- 1 boincer umatlas 175002014 Oct 10 12:46 shared/HITS.pool.root.1
[2025-10-10 12:48:19]  *** Contents of shared directory: ***
[2025-10-10 12:48:19] total 381456
[2025-10-10 12:48:19] -rw-r--r-- 2 boincer umatlas 213852572 Oct 10 11:11 ATLAS.root_0
[2025-10-10 12:48:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 11:11 start_atlas.sh
[2025-10-10 12:48:19] -rw-r--r-- 2 boincer umatlas    565604 Oct 10 11:11 input.tar.gz
[2025-10-10 12:48:19] -rw------- 1 boincer umatlas 175002014 Oct 10 12:46 HITS.pool.root.1
[2025-10-10 12:48:19] -rw------- 1 boincer umatlas   1157120 Oct 10 12:48 result.tar.gz
12:48:20 (12019): run_atlas exited; CPU time 42048.565037
12:48:20 (12019): called boinc_finish(0)

</stderr_txt>
]]>

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