Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
18:22:38 (718571): wrapper (7.7.26015): starting
18:22:38 (718571): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 18:22:38] Arguments: --nthreads 12
[2025-10-10 18:22:38] Threads: 12
[2025-10-10 18:22:38] Checking for CVMFS
[2025-10-10 18:22:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 18:22:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 18:22:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 18:22:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 18:22:38] 2.13.2.0 2625769 1308 50968 151558 2 187 4049093 4096000 854 130560 4 6422970 99.998 47838 181 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-10 18:22:38] CVMFS is ok
[2025-10-10 18:22:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 18:22:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 18:22:38] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-10 18:22:38] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-10 18:22:38] Further information can be found at the LHC@home message board.
[2025-10-10 18:22:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 18:22:38] Checking for apptainer binary...
[2025-10-10 18:22:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 18:22:38] Running /usr/bin/apptainer --version
[2025-10-10 18:22:38] apptainer version 1.4.3
[2025-10-10 18:22:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 18:22:38] test-run
[2025-10-10 18:22:38] apptainer works
[2025-10-10 18:22:38] Set ATHENA_PROC_NUMBER=12
[2025-10-10 18:22:38] Set ATHENA_CORE_NUMBER=12
[2025-10-10 18:22:38] Starting ATLAS job with PandaID=6837509281
[2025-10-10 18:22:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 18:45:49]  *** The last 200 lines of the pilot log: ***
[2025-10-10 18:45:49]  status=None
[2025-10-10 18:45:49]  status_code=0
[2025-10-10 18:45:49]  storage_token=
[2025-10-10 18:45:49]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6837509281/log.46676269._034554.job.log.tgz.1
[2025-10-10 18:45:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/d5/log.46676269._034554.job.log.tgz.1
[2025-10-10 18:45:49]  workdir=None
[2025-10-10 18:45:49] ]
[2025-10-10 18:45:49] 2025-10-10 18:44:46,180 | INFO     | transferring file log.46676269._034554.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6837509281/log.46676269._034554.job.log.tgz.1 to /var/lib/boinc
[2025-10-10 18:45:49] 2025-10-10 18:44:46,180 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6837509281/log.46676269._034554.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.466762
[2025-10-10 18:45:49] 2025-10-10 18:44:46,184 | INFO     | adding to output.list: log.46676269._034554.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/d5/log.46676269._034554.job.log.tg
[2025-10-10 18:45:49] 2025-10-10 18:44:46,185 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 18:45:49] 2025-10-10 18:44:46,185 | INFO     | summary of transferred files:
[2025-10-10 18:45:49] 2025-10-10 18:44:46,185 | INFO     |  -- lfn=log.46676269._034554.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 18:45:49] 2025-10-10 18:44:46,185 | INFO     | stage-out finished correctly
[2025-10-10 18:45:49] 2025-10-10 18:44:46,540 | INFO     | time since job start (1324s) is within the limit (172800.0s)
[2025-10-10 18:45:49] 2025-10-10 18:44:46,544 | INFO     | monitor loop #106: job 0:6837509281 is in state 'finished'
[2025-10-10 18:45:49] 2025-10-10 18:44:46,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 18:45:49] 2025-10-10 18:44:47,561 | INFO     | PID=722422 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 18:45:49] 2025-10-10 18:44:47,562 | INFO     | .. there are 2 such processes running
[2025-10-10 18:45:49] 2025-10-10 18:44:48,562 | INFO     | time since job start (1326s) is within the limit (172800.0s)
[2025-10-10 18:45:49] 2025-10-10 18:44:48,562 | INFO     | 1328s have passed since pilot start - server update state is 'RUNNING'
[2025-10-10 18:45:49] 2025-10-10 18:44:48,641 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 18:45:49] 2025-10-10 18:44:49,047 | INFO     | monitor loop #107: job 0:6837509281 is in state 'finished'
[2025-10-10 18:45:49] 2025-10-10 18:44:49,047 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 18:45:49] 2025-10-10 18:44:50,567 | INFO     | time since job start (1328s) is within the limit (172800.0s)
[2025-10-10 18:45:49] 2025-10-10 18:44:50,668 | INFO     | job 6837509281 has state=finished
[2025-10-10 18:45:49] 2025-10-10 18:44:50,668 | INFO     | preparing for final server update for job 6837509281 in state='finished'
[2025-10-10 18:45:49] 2025-10-10 18:44:50,668 | INFO     | this job has now completed (state=finished)
[2025-10-10 18:45:49] 2025-10-10 18:44:50,668 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 18:45:49] 2025-10-10 18:44:50,668 | INFO     | log transfer has been attempted: DONE
[2025-10-10 18:45:49] 2025-10-10 18:44:50,668 | INFO     | job 6837509281 has finished - writing final server update
[2025-10-10 18:45:49] 2025-10-10 18:44:50,668 | INFO     | total number of processed events: 400 (read)
[2025-10-10 18:45:49] 2025-10-10 18:44:50,669 | INFO     | executing command: lscpu
[2025-10-10 18:45:49] 2025-10-10 18:44:50,676 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 18:45:49] 2025-10-10 18:44:51,448 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 18:45:49] 2025-10-10 18:44:51,448 | INFO     | found 32 cores (32 cores per socket, 1 socket) , CPU MHz: 4299.979999999998
[2025-10-10 18:45:49] 2025-10-10 18:44:51,449 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6837509281/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | extracted standard info from prmon json
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | fitting pss+swap vs Time
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | sum of square deviations: 1041880.0
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | sum of deviations: 96586973.0
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | mean x: 1760121309.0
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | mean y: 2878042.6
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | -- intersect: -163168302274.81433
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | intersect: -163168302274.81433
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | chi2: 0.0010056040029762564
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | -- intersect: -163168302274.81433
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | current memory leak: 92.70 B/s (using 15 data points, chi2=0.00)
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | could have reported an average CPU frequency of 4299 MHz (4 samples)
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | ..............................
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | . Timing measurements:
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | . get job = 0 s
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | . initial setup = 2 s
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | . payload setup = 1 s
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | . stage-in = 0 s
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | . payload execution = 1307 s
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | . stage-out = 0 s
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | . log creation = 0 s
[2025-10-10 18:45:49] 2025-10-10 18:44:51,450 | INFO     | ..............................
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | 
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | job summary report
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | --------------------------------------------------
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | PanDA job id: 6837509281
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | task id: 46676269
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | errors: (none)
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | pilot state: finished 
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | transexitcode: 0
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | exeerrorcode: 0
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | exeerrordiag: 
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | exitcode: 0
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | exitmsg: OK
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | cpuconsumptiontime: 11792 s
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | nevents: 400
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | neventsw: 0
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | pid: 729070
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | pgrp: 729070
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | corecount: 12
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | event service: False
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | sizes: {0: 2348693, 1: 2349154, 11: 2349154, 1312: 2382815, 1314: 2382815, 1317: 2383009}
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | --------------------------------------------------
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | 
[2025-10-10 18:45:49] 2025-10-10 18:44:51,468 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-10 18:45:49] 2025-10-10 18:44:51,473 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 18:45:49] 2025-10-10 18:44:51,473 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 18:45:49] 2025-10-10 18:44:51,473 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 18:45:49] 2025-10-10 18:44:51,473 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 18:45:49] 2025-10-10 18:44:51,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 18:45:49] 2025-10-10 18:44:51,474 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 18:45:49] 2025-10-10 18:44:51,474 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 18:45:49] 2025-10-10 18:44:51,474 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 18:45:49] 2025-10-10 18:44:51,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 18:45:49] 2025-10-10 18:44:51,474 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 18:45:49] 2025-10-10 18:44:51,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 18:45:49] 2025-10-10 18:44:51,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 18:45:49] 2025-10-10 18:44:51,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 18:45:49] 2025-10-10 18:44:51,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 18:45:49] 2025-10-10 18:44:51,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 18:45:49] 2025-10-10 18:44:51,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 18:45:49] 2025-10-10 18:44:51,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 18:45:49] 2025-10-10 18:44:51,474 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 18:45:49] 2025-10-10 18:44:51,474 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 18:45:49] 2025-10-10 18:44:51,474 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 18:45:49] 2025-10-10 18:44:51,474 | INFO     | job 6837509281 has completed (purged errors)
[2025-10-10 18:45:49] 2025-10-10 18:44:51,474 | INFO     | overall cleanup function is called
[2025-10-10 18:45:49] 2025-10-10 18:44:52,479 | INFO     | --- collectZombieJob: --- 10, [729070]
[2025-10-10 18:45:49] 2025-10-10 18:44:52,480 | INFO     | zombie collector waiting for pid 729070
[2025-10-10 18:45:49] 2025-10-10 18:44:52,480 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 18:45:49] 2025-10-10 18:44:52,480 | INFO     | collected zombie processes
[2025-10-10 18:45:49] 2025-10-10 18:44:52,480 | INFO     | will attempt to kill all subprocesses of pid=729070
[2025-10-10 18:45:49] 2025-10-10 18:44:52,493 | INFO     | process IDs to be killed: [729070] (in reverse order)
[2025-10-10 18:45:49] 2025-10-10 18:44:52,503 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 18:45:49] 2025-10-10 18:44:52,503 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 18:45:49] 2025-10-10 18:44:52,503 | INFO     | did not find any defunct processes belonging to 729070
[2025-10-10 18:45:49] 2025-10-10 18:44:52,504 | INFO     | did not find any defunct processes belonging to 729070
[2025-10-10 18:45:49] 2025-10-10 18:44:52,504 | INFO     | ready for new job
[2025-10-10 18:45:49] 2025-10-10 18:44:52,504 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 18:45:49] 2025-10-10 18:44:52,504 | INFO     | ***************************************
[2025-10-10 18:45:49] 2025-10-10 18:44:52,504 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 18:45:49] 2025-10-10 18:44:52,504 | INFO     | ***************************************
[2025-10-10 18:45:49] 2025-10-10 18:44:52,504 | INFO     | 
[2025-10-10 18:45:49] 2025-10-10 18:44:52,505 | INFO     | pilot is running in a VM
[2025-10-10 18:45:49] 2025-10-10 18:44:52,505 | INFO     | architecture information:
[2025-10-10 18:45:49] 2025-10-10 18:44:52,505 | INFO     | executing command: cat /etc/os-release
[2025-10-10 18:45:49] 2025-10-10 18:44:52,508 | INFO     | cat /etc/os-release:
[2025-10-10 18:45:49] NAME="CentOS Linux"
[2025-10-10 18:45:49] VERSION="7 (Core)"
[2025-10-10 18:45:49] ID="centos"
[2025-10-10 18:45:49] ID_LIKE="rhel fedora"
[2025-10-10 18:45:49] VERSION_ID="7"
[2025-10-10 18:45:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 18:45:49] ANSI_COLOR="0;31"
[2025-10-10 18:45:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 18:45:49] HOME_URL="https://www.centos.org/"
[2025-10-10 18:45:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 18:45:49] 
[2025-10-10 18:45:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 18:45:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 18:45:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 18:45:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 18:45:49] 
[2025-10-10 18:45:49] 2025-10-10 18:44:52,508 | INFO     | ***************************************
[2025-10-10 18:45:49] 2025-10-10 18:44:53,011 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-10 18:45:49] 2025-10-10 18:44:53,015 | INFO     | sufficient remaining disk space (23312990208 B)
[2025-10-10 18:45:49] 2025-10-10 18:44:53,015 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 18:45:49] 2025-10-10 18:44:53,015 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 18:45:49] 2025-10-10 18:44:53,015 | INFO     | update_server=False
[2025-10-10 18:45:49] 2025-10-10 18:44:53,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 18:45:49] 2025-10-10 18:44:53,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 18:45:49] 2025-10-10 18:44:53,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 18:45:49] 2025-10-10 18:44:53,016 | INFO     | aborting loop
[2025-10-10 18:45:49] 2025-10-10 18:44:53,048 | INFO     | all data control threads have been joined
[2025-10-10 18:45:49] 2025-10-10 18:44:53,350 | INFO     | all payload control threads have been joined
[2025-10-10 18:45:49] 2025-10-10 18:44:53,571 | INFO     | all job control threads have been joined
[2025-10-10 18:45:49] 2025-10-10 18:44:54,021 | INFO     | [job] retrieve thread has finished
[2025-10-10 18:45:49] 2025-10-10 18:44:54,021 | INFO     | [job] job monitor thread has finished
[2025-10-10 18:45:49] 2025-10-10 18:44:54,021 | INFO     | [job] queue monitor thread has finished
[2025-10-10 18:45:49] 2025-10-10 18:44:54,053 | INFO     | [data] control thread has finished
[2025-10-10 18:45:49] 2025-10-10 18:44:54,210 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 18:45:49] 2025-10-10 18:44:54,355 | INFO     | [payload] control thread has finished
[2025-10-10 18:45:49] 2025-10-10 18:44:54,525 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 18:45:49] 2025-10-10 18:44:54,577 | INFO     | [job] control thread has finished
[2025-10-10 18:45:49] 2025-10-10 18:44:54,597 | INFO     | [data] copytool_in thread has finished
[2025-10-10 18:45:49] 2025-10-10 18:44:54,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 18:45:49] 2025-10-10 18:44:55,024 | INFO     | [job] validate thread has finished
[2025-10-10 18:45:49] 2025-10-10 18:44:55,041 | INFO     | [payload] validate_post thread has finished
[2025-10-10 18:45:49] 2025-10-10 18:44:55,220 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 18:45:49] 2025-10-10 18:44:55,244 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 18:45:49] 2025-10-10 18:44:55,368 | INFO     | [payload] failed_post thread has finished
[2025-10-10 18:45:49] 2025-10-10 18:44:56,216 | INFO     | [data] copytool_out thread has finished
[2025-10-10 18:45:49] 2025-10-10 18:44:58,669 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 18:45:49] 2025-10-10 18:45:03,888 | INFO     | job.realtimelogging is not enabled
[2025-10-10 18:45:49] 2025-10-10 18:45:04,894 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 18:45:49] 2025-10-10 18:45:23,666 | INFO     | PID=722422 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 18:45:49] 2025-10-10 18:45:23,666 | INFO     | .. there are 2 such processes running
[2025-10-10 18:45:49] 2025-10-10 18:45:23,666 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 18:45:49] 2025-10-10 18:45:23,666 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 18:45:49] 2025-10-10 18:45:23,666 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 18:45:49] 2025-10-10 18:45:43,895 | INFO     | [monitor] cgroup control has ended
[2025-10-10 18:45:49] 2025-10-10 18:45:44,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139813567477568)>', '<ExcThread(monitor, started 139812854032128)>']
[2025-10-10 18:45:49] 2025-10-10 18:45:45,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 18:45:49] 2025-10-10 18:45:45,778 | INFO     | [monitor] control thread has ended
[2025-10-10 18:45:49] 2025-10-10 18:45:49,855 | INFO     | all workflow threads have been joined
[2025-10-10 18:45:49] 2025-10-10 18:45:49,855 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 18:45:49] 2025-10-10 18:45:49,855 | INFO     | traces error code: 0
[2025-10-10 18:45:49] 2025-10-10 18:45:49,856 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 18:45:49] 2025-10-10 18:45:49,881 [wrapper] ==== pilot stdout END ====
[2025-10-10 18:45:49] 2025-10-10 18:45:49,882 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 18:45:49] 2025-10-10 18:45:49,882 [wrapper] pilotpid: 722422
[2025-10-10 18:45:49] 2025-10-10 18:45:49,883 [wrapper] Pilot exit status: 0
[2025-10-10 18:45:49] 2025-10-10 18:45:49,885 [wrapper] pandaids: 6837509281
[2025-10-10 18:45:49] 2025-10-10 18:45:49,892 [wrapper] cleanup supervisor_pilot  736138 722423
[2025-10-10 18:45:49] 2025-10-10 18:45:49,892 [wrapper] Test setup, not cleaning
[2025-10-10 18:45:49] 2025-10-10 18:45:49,893 [wrapper] apfmon messages muted
[2025-10-10 18:45:49] 2025-10-10 18:45:49,893 [wrapper] ==== wrapper stdout END ====
[2025-10-10 18:45:49] 2025-10-10 18:45:49,894 [wrapper] ==== wrapper stderr END ====
[2025-10-10 18:45:49]  *** Error codes and diagnostics ***
[2025-10-10 18:45:49]     "exeErrorCode": 0,
[2025-10-10 18:45:49]     "exeErrorDiag": "",
[2025-10-10 18:45:49]     "pilotErrorCode": 0,
[2025-10-10 18:45:49]     "pilotErrorDiag": "",
[2025-10-10 18:45:49]  *** Listing of results directory ***
[2025-10-10 18:45:49] total 411488
[2025-10-10 18:45:49] -rw-r--r-- 1 boinc boinc    557409 Oct 10 07:12 pilot3.tar.gz
[2025-10-10 18:45:49] -rwx------ 1 boinc boinc     36292 Oct 10 07:18 runpilot2-wrapper.sh
[2025-10-10 18:45:49] -rw-r--r-- 1 boinc boinc      5112 Oct 10 07:18 queuedata.json
[2025-10-10 18:45:49] -rw-r--r-- 1 boinc boinc       100 Oct 10 18:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 18:45:49] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 18:22 run_atlas
[2025-10-10 18:45:49] -rw-r--r-- 1 boinc boinc       105 Oct 10 18:22 job.xml
[2025-10-10 18:45:49] -rw-r--r-- 2 boinc boinc     15120 Oct 10 18:22 start_atlas.sh
[2025-10-10 18:45:49] drwxrwx--x 2 boinc boinc      4096 Oct 10 18:22 shared
[2025-10-10 18:45:49] -rw-r--r-- 2 boinc boinc    569679 Oct 10 18:22 input.tar.gz
[2025-10-10 18:45:49] -rw-r--r-- 1 boinc boinc      6938 Oct 10 18:22 init_data.xml
[2025-10-10 18:45:49] -rw-r--r-- 2 boinc boinc 221622744 Oct 10 18:22 EVNT.46676267._001405.pool.root.1
[2025-10-10 18:45:49] -rw-r--r-- 1 boinc boinc         0 Oct 10 18:22 boinc_lockfile
[2025-10-10 18:45:49] -rw-r--r-- 1 boinc boinc      2550 Oct 10 18:22 pandaJob.out
[2025-10-10 18:45:49] -rw------- 1 boinc boinc    975525 Oct 10 18:22 agis_schedconf.cvmfs.json
[2025-10-10 18:45:49] -rw------- 1 boinc boinc   1560580 Oct 10 18:22 agis_ddmendpoints.agis.ALL.json
[2025-10-10 18:45:49] drwx------ 5 boinc boinc      4096 Oct 10 18:22 pilot3
[2025-10-10 18:45:49] -rw------- 1 boinc boinc 194651780 Oct 10 18:44 HITS.46676269._034554.pool.root.1
[2025-10-10 18:45:49] -rw-r--r-- 1 boinc boinc       529 Oct 10 18:44 boinc_task_state.xml
[2025-10-10 18:45:49] -rw------- 1 boinc boinc      1021 Oct 10 18:44 memory_monitor_summary.json
[2025-10-10 18:45:49] -rw------- 1 boinc boinc        95 Oct 10 18:44 pilot_heartbeat.json
[2025-10-10 18:45:49] -rw------- 1 boinc boinc    351833 Oct 10 18:44 log.46676269._034554.job.log.tgz.1
[2025-10-10 18:45:49] -rw------- 1 boinc boinc      7738 Oct 10 18:44 heartbeat.json
[2025-10-10 18:45:49] -rw-r--r-- 1 boinc boinc      8192 Oct 10 18:45 boinc_mmap_file
[2025-10-10 18:45:49] -rw-r--r-- 1 boinc boinc        27 Oct 10 18:45 wrapper_checkpoint.txt
[2025-10-10 18:45:49] -rw------- 1 boinc boinc      4963 Oct 10 18:45 pilotlog.txt
[2025-10-10 18:45:49] -rw------- 1 boinc boinc    238720 Oct 10 18:45 log.46676269._034554.job.log.1
[2025-10-10 18:45:49] -rw------- 1 boinc boinc       357 Oct 10 18:45 output.list
[2025-10-10 18:45:49] -rw-r--r-- 1 boinc boinc       620 Oct 10 18:45 runtime_log
[2025-10-10 18:45:49] -rw------- 1 boinc boinc    614400 Oct 10 18:45 result.tar.gz
[2025-10-10 18:45:49] -rw------- 1 boinc boinc       639 Oct 10 18:45 wkMKDmfZMR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9icNDm5bIllm.diag
[2025-10-10 18:45:49] -rw-r--r-- 1 boinc boinc      8762 Oct 10 18:45 runtime_log.err
[2025-10-10 18:45:49] -rw-r--r-- 1 boinc boinc     22187 Oct 10 18:45 stderr.txt
[2025-10-10 18:45:49] HITS file was successfully produced:
[2025-10-10 18:45:49] -rw------- 1 boinc boinc 194651780 Oct 10 18:44 shared/HITS.pool.root.1
[2025-10-10 18:45:49]  *** Contents of shared directory: ***
[2025-10-10 18:45:49] total 407704
[2025-10-10 18:45:49] -rw-r--r-- 2 boinc boinc     15120 Oct 10 18:22 start_atlas.sh
[2025-10-10 18:45:49] -rw-r--r-- 2 boinc boinc    569679 Oct 10 18:22 input.tar.gz
[2025-10-10 18:45:49] -rw-r--r-- 2 boinc boinc 221622744 Oct 10 18:22 ATLAS.root_0
[2025-10-10 18:45:49] -rw------- 1 boinc boinc 194651780 Oct 10 18:44 HITS.pool.root.1
[2025-10-10 18:45:49] -rw------- 1 boinc boinc    614400 Oct 10 18:45 result.tar.gz
18:45:51 (718571): run_atlas exited; CPU time 11795.270251
18:45:51 (718571): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN