Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:04:33 (17068): wrapper (7.7.26015): starting
11:04:33 (17068): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 11:04:33] Arguments: --nthreads 12
[2025-10-10 11:04:33] Threads: 12
[2025-10-10 11:04:33] Checking for CVMFS
[2025-10-10 11:04:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 11:04:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 11:04:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 11:04:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 11:04:33] 2.11.2.0 2916 220112 100728 151550 3 56 16573552 20275201 1 130560 1 105376376 99.984 13317092 12442 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 11:04:33] CVMFS is ok
[2025-10-10 11:04:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 11:04:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 11:04:33] Further information can be found at the LHC@home message board.
[2025-10-10 11:04:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 11:04:33] Checking for apptainer binary...
[2025-10-10 11:04:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 11:04:33] Running /usr/bin/apptainer --version
[2025-10-10 11:04:33] apptainer version 1.3.2-1.el7
[2025-10-10 11:04:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 11:04:35] c-205-23.aglt2.org
[2025-10-10 11:04:35] apptainer works
[2025-10-10 11:04:35] Set ATHENA_PROC_NUMBER=12
[2025-10-10 11:04:35] Set ATHENA_CORE_NUMBER=12
[2025-10-10 11:04:35] Starting ATLAS job with PandaID=6837509157
[2025-10-10 11:04:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 12:19:04]  *** The last 200 lines of the pilot log: ***
[2025-10-10 12:19:04]  mtime=0
[2025-10-10 12:19:04]  protocol_id=None
[2025-10-10 12:19:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-10 12:19:04]  replicas=None
[2025-10-10 12:19:04]  scope=mc23_13p6TeV
[2025-10-10 12:19:04]  status=None
[2025-10-10 12:19:04]  status_code=0
[2025-10-10 12:19:04]  storage_token=
[2025-10-10 12:19:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6837509157/log.46676269._034430.job.log.tgz.1
[2025-10-10 12:19:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3c/77/log.46676269._034430.job.log.tgz.1
[2025-10-10 12:19:04]  workdir=None
[2025-10-10 12:19:04] ]
[2025-10-10 12:19:04] 2025-10-10 16:17:56,882 | INFO     | transferring file log.46676269._034430.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6837509157/log.46676269._034430.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-10 12:19:04] 2025-10-10 16:17:56,882 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6837509157/log.46676269._034430.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._034430.job
[2025-10-10 12:19:04] 2025-10-10 16:17:56,904 | INFO     | adding to output.list: log.46676269._034430.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3c/77/log.46676269._034430.job.log.tg
[2025-10-10 12:19:04] 2025-10-10 16:17:56,905 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 12:19:04] 2025-10-10 16:17:56,905 | INFO     | summary of transferred files:
[2025-10-10 12:19:04] 2025-10-10 16:17:56,905 | INFO     |  -- lfn=log.46676269._034430.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 12:19:04] 2025-10-10 16:17:56,905 | INFO     | stage-out finished correctly
[2025-10-10 12:19:04] 2025-10-10 16:17:56,989 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 12:19:04] 2025-10-10 16:17:57,072 | INFO     | job 6837509157 has state=finished
[2025-10-10 12:19:04] 2025-10-10 16:17:57,072 | INFO     | preparing for final server update for job 6837509157 in state='finished'
[2025-10-10 12:19:04] 2025-10-10 16:17:57,073 | INFO     | this job has now completed (state=finished)
[2025-10-10 12:19:04] 2025-10-10 16:17:57,073 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 12:19:04] 2025-10-10 16:17:57,073 | INFO     | log transfer has been attempted: DONE
[2025-10-10 12:19:04] 2025-10-10 16:17:57,073 | INFO     | job 6837509157 has finished - writing final server update
[2025-10-10 12:19:04] 2025-10-10 16:17:57,074 | INFO     | total number of processed events: 400 (read)
[2025-10-10 12:19:04] 2025-10-10 16:17:57,075 | INFO     | executing command: lscpu
[2025-10-10 12:19:04] 2025-10-10 16:17:57,100 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 12:19:04] 2025-10-10 16:17:58,575 | INFO     | monitor loop #327: job 0:6837509157 is in state 'finished'
[2025-10-10 12:19:04] 2025-10-10 16:17:58,575 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:19:04] 2025-10-10 16:17:58,664 | INFO     | time since job start (4388s) is within the limit (172800.0s)
[2025-10-10 12:19:04] 2025-10-10 16:18:00,669 | INFO     | time since job start (4390s) is within the limit (172800.0s)
[2025-10-10 12:19:04] 2025-10-10 16:18:01,078 | INFO     | monitor loop #328: job 0:6837509157 is in state 'finished'
[2025-10-10 12:19:04] 2025-10-10 16:18:01,085 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:19:04] 2025-10-10 16:18:02,674 | INFO     | time since job start (4392s) is within the limit (172800.0s)
[2025-10-10 12:19:04] 2025-10-10 16:18:03,062 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-10 12:19:04] 2025-10-10 16:18:03,066 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-10-10 12:19:04] 2025-10-10 16:18:03,068 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837509157/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 12:19:04] 2025-10-10 16:18:03,069 | INFO     | extracted standard info from prmon json
[2025-10-10 12:19:04] 2025-10-10 16:18:03,070 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 12:19:04] 2025-10-10 16:18:03,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 12:19:04] 2025-10-10 16:18:03,070 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 12:19:04] 2025-10-10 16:18:03,070 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 12:19:04] 2025-10-10 16:18:03,072 | INFO     | fitting pss+swap vs Time
[2025-10-10 12:19:04] 2025-10-10 16:18:03,072 | INFO     | sum of square deviations: 85136480.0
[2025-10-10 12:19:04] 2025-10-10 16:18:03,072 | INFO     | sum of deviations: -3449458744.0
[2025-10-10 12:19:04] 2025-10-10 16:18:03,073 | INFO     | mean x: 1760110976.0
[2025-10-10 12:19:04] 2025-10-10 16:18:03,073 | INFO     | mean y: 2716054.9076923076
[2025-10-10 12:19:04] 2025-10-10 16:18:03,073 | INFO     | -- intersect: 71316801351.5229
[2025-10-10 12:19:04] 2025-10-10 16:18:03,073 | INFO     | intersect: 71316801351.5229
[2025-10-10 12:19:04] 2025-10-10 16:18:03,073 | INFO     | chi2: 0.04368479011196501
[2025-10-10 12:19:04] 2025-10-10 16:18:03,073 | INFO     | -- intersect: 71316801351.5229
[2025-10-10 12:19:04] 2025-10-10 16:18:03,073 | INFO     | current memory leak: -40.52 B/s (using 65 data points, chi2=0.04)
[2025-10-10 12:19:04] 2025-10-10 16:18:03,074 | INFO     | could have reported an average CPU frequency of 2058 MHz (6 samples)
[2025-10-10 12:19:04] 2025-10-10 16:18:03,074 | INFO     | ..............................
[2025-10-10 12:19:04] 2025-10-10 16:18:03,074 | INFO     | . Timing measurements:
[2025-10-10 12:19:04] 2025-10-10 16:18:03,074 | INFO     | . get job = 0 s
[2025-10-10 12:19:04] 2025-10-10 16:18:03,074 | INFO     | . initial setup = 2 s
[2025-10-10 12:19:04] 2025-10-10 16:18:03,074 | INFO     | . payload setup = 7 s
[2025-10-10 12:19:04] 2025-10-10 16:18:03,074 | INFO     | . stage-in = 0 s
[2025-10-10 12:19:04] 2025-10-10 16:18:03,075 | INFO     | . payload execution = 4358 s
[2025-10-10 12:19:04] 2025-10-10 16:18:03,075 | INFO     | . stage-out = 0 s
[2025-10-10 12:19:04] 2025-10-10 16:18:03,075 | INFO     | . log creation = 0 s
[2025-10-10 12:19:04] 2025-10-10 16:18:03,075 | INFO     | ..............................
[2025-10-10 12:19:04] 2025-10-10 16:18:03,157 | INFO     | 
[2025-10-10 12:19:04] 2025-10-10 16:18:03,158 | INFO     | job summary report
[2025-10-10 12:19:04] 2025-10-10 16:18:03,158 | INFO     | --------------------------------------------------
[2025-10-10 12:19:04] 2025-10-10 16:18:03,158 | INFO     | PanDA job id: 6837509157
[2025-10-10 12:19:04] 2025-10-10 16:18:03,158 | INFO     | task id: 46676269
[2025-10-10 12:19:04] 2025-10-10 16:18:03,158 | INFO     | errors: (none)
[2025-10-10 12:19:04] 2025-10-10 16:18:03,158 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 12:19:04] 2025-10-10 16:18:03,159 | INFO     | pilot state: finished 
[2025-10-10 12:19:04] 2025-10-10 16:18:03,159 | INFO     | transexitcode: 0
[2025-10-10 12:19:04] 2025-10-10 16:18:03,159 | INFO     | exeerrorcode: 0
[2025-10-10 12:19:04] 2025-10-10 16:18:03,159 | INFO     | exeerrordiag: 
[2025-10-10 12:19:04] 2025-10-10 16:18:03,159 | INFO     | exitcode: 0
[2025-10-10 12:19:04] 2025-10-10 16:18:03,159 | INFO     | exitmsg: OK
[2025-10-10 12:19:04] 2025-10-10 16:18:03,160 | INFO     | cpuconsumptiontime: 46520 s
[2025-10-10 12:19:04] 2025-10-10 16:18:03,160 | INFO     | nevents: 400
[2025-10-10 12:19:04] 2025-10-10 16:18:03,160 | INFO     | neventsw: 0
[2025-10-10 12:19:04] 2025-10-10 16:18:03,160 | INFO     | pid: 28306
[2025-10-10 12:19:04] 2025-10-10 16:18:03,160 | INFO     | pgrp: 28306
[2025-10-10 12:19:04] 2025-10-10 16:18:03,160 | INFO     | corecount: 12
[2025-10-10 12:19:04] 2025-10-10 16:18:03,160 | INFO     | event service: False
[2025-10-10 12:19:04] 2025-10-10 16:18:03,160 | INFO     | sizes: {0: 2348851, 5: 2349113, 11: 2349169, 4369: 2375215, 4370: 2384269, 4376: 2384407}
[2025-10-10 12:19:04] 2025-10-10 16:18:03,160 | INFO     | --------------------------------------------------
[2025-10-10 12:19:04] 2025-10-10 16:18:03,160 | INFO     | 
[2025-10-10 12:19:04] 2025-10-10 16:18:03,161 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 12:19:04] 2025-10-10 16:18:03,184 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 12:19:04] 2025-10-10 16:18:03,184 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 12:19:04] 2025-10-10 16:18:03,184 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 12:19:04] 2025-10-10 16:18:03,184 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 12:19:04] 2025-10-10 16:18:03,185 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 12:19:04] 2025-10-10 16:18:03,185 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 12:19:04] 2025-10-10 16:18:03,185 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 12:19:04] 2025-10-10 16:18:03,185 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 12:19:04] 2025-10-10 16:18:03,185 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 12:19:04] 2025-10-10 16:18:03,185 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 12:19:04] 2025-10-10 16:18:03,186 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 12:19:04] 2025-10-10 16:18:03,186 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 12:19:04] 2025-10-10 16:18:03,186 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 12:19:04] 2025-10-10 16:18:03,186 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 12:19:04] 2025-10-10 16:18:03,186 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 12:19:04] 2025-10-10 16:18:03,186 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 12:19:04] 2025-10-10 16:18:03,187 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 12:19:04] 2025-10-10 16:18:03,187 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 12:19:04] 2025-10-10 16:18:03,187 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 12:19:04] 2025-10-10 16:18:03,187 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 12:19:04] 2025-10-10 16:18:03,187 | INFO     | job 6837509157 has completed (purged errors)
[2025-10-10 12:19:04] 2025-10-10 16:18:03,188 | INFO     | overall cleanup function is called
[2025-10-10 12:19:04] 2025-10-10 16:18:03,796 | INFO     | PID=20763 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 12:19:04] 2025-10-10 16:18:04,195 | INFO     | --- collectZombieJob: --- 10, [28306]
[2025-10-10 12:19:04] 2025-10-10 16:18:04,196 | INFO     | zombie collector waiting for pid 28306
[2025-10-10 12:19:04] 2025-10-10 16:18:04,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 12:19:04] 2025-10-10 16:18:04,196 | INFO     | collected zombie processes
[2025-10-10 12:19:04] 2025-10-10 16:18:04,196 | INFO     | will attempt to kill all subprocesses of pid=28306
[2025-10-10 12:19:04] 2025-10-10 16:18:04,283 | INFO     | process IDs to be killed: [28306] (in reverse order)
[2025-10-10 12:19:04] 2025-10-10 16:18:04,334 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 12:19:04] 2025-10-10 16:18:04,335 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 12:19:04] 2025-10-10 16:18:04,338 | INFO     | did not find any defunct processes belonging to 28306
[2025-10-10 12:19:04] 2025-10-10 16:18:04,341 | INFO     | did not find any defunct processes belonging to 28306
[2025-10-10 12:19:04] 2025-10-10 16:18:04,341 | INFO     | ready for new job
[2025-10-10 12:19:04] 2025-10-10 16:18:04,341 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 12:19:04] 2025-10-10 16:18:04,342 | INFO     | ***************************************
[2025-10-10 12:19:04] 2025-10-10 16:18:04,342 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 12:19:04] 2025-10-10 16:18:04,342 | INFO     | ***************************************
[2025-10-10 12:19:04] 2025-10-10 16:18:04,342 | INFO     | 
[2025-10-10 12:19:04] 2025-10-10 16:18:04,343 | INFO     | architecture information:
[2025-10-10 12:19:04] 2025-10-10 16:18:04,344 | INFO     | executing command: cat /etc/os-release
[2025-10-10 12:19:04] 2025-10-10 16:18:04,359 | INFO     | cat /etc/os-release:
[2025-10-10 12:19:04] NAME="CentOS Linux"
[2025-10-10 12:19:04] VERSION="7 (Core)"
[2025-10-10 12:19:04] ID="centos"
[2025-10-10 12:19:04] ID_LIKE="rhel fedora"
[2025-10-10 12:19:04] VERSION_ID="7"
[2025-10-10 12:19:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 12:19:04] ANSI_COLOR="0;31"
[2025-10-10 12:19:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 12:19:04] HOME_URL="https://www.centos.org/"
[2025-10-10 12:19:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 12:19:04] 
[2025-10-10 12:19:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 12:19:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 12:19:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 12:19:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 12:19:04] 
[2025-10-10 12:19:04] 2025-10-10 16:18:04,359 | INFO     | ***************************************
[2025-10-10 12:19:04] 2025-10-10 16:18:04,862 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 12:19:04] 2025-10-10 16:18:04,878 | INFO     | sufficient remaining disk space (29367468032 B)
[2025-10-10 12:19:04] 2025-10-10 16:18:04,878 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 12:19:04] 2025-10-10 16:18:04,878 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 12:19:04] 2025-10-10 16:18:04,879 | INFO     | update_server=False
[2025-10-10 12:19:04] 2025-10-10 16:18:04,879 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 12:19:04] 2025-10-10 16:18:04,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:19:04] 2025-10-10 16:18:04,879 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:19:04] 2025-10-10 16:18:04,880 | INFO     | aborting loop
[2025-10-10 12:19:04] 2025-10-10 16:18:05,001 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 12:19:04] 2025-10-10 16:18:05,127 | INFO     | all job control threads have been joined
[2025-10-10 12:19:04] 2025-10-10 16:18:05,166 | INFO     | all data control threads have been joined
[2025-10-10 12:19:04] 2025-10-10 16:18:05,177 | INFO     | all payload control threads have been joined
[2025-10-10 12:19:04] 2025-10-10 16:18:05,882 | INFO     | [job] job monitor thread has finished
[2025-10-10 12:19:04] 2025-10-10 16:18:05,884 | INFO     | [job] queue monitor thread has finished
[2025-10-10 12:19:04] 2025-10-10 16:18:05,884 | INFO     | [job] retrieve thread has finished
[2025-10-10 12:19:04] 2025-10-10 16:18:06,079 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 12:19:04] 2025-10-10 16:18:06,100 | INFO     | [data] copytool_in thread has finished
[2025-10-10 12:19:04] 2025-10-10 16:18:06,130 | INFO     | [job] control thread has finished
[2025-10-10 12:19:04] 2025-10-10 16:18:06,171 | INFO     | [data] control thread has finished
[2025-10-10 12:19:04] 2025-10-10 16:18:06,182 | INFO     | [payload] control thread has finished
[2025-10-10 12:19:04] 2025-10-10 16:18:06,547 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 12:19:04] 2025-10-10 16:18:06,684 | INFO     | [job] validate thread has finished
[2025-10-10 12:19:04] 2025-10-10 16:18:06,763 | INFO     | [payload] validate_post thread has finished
[2025-10-10 12:19:04] 2025-10-10 16:18:06,833 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 12:19:04] 2025-10-10 16:18:07,006 | INFO     | [data] copytool_out thread has finished
[2025-10-10 12:19:04] 2025-10-10 16:18:07,082 | INFO     | [payload] failed_post thread has finished
[2025-10-10 12:19:04] 2025-10-10 16:18:07,157 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 12:19:04] 2025-10-10 16:18:07,585 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 12:19:04] 2025-10-10 16:18:11,591 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 12:19:04] 2025-10-10 16:18:35,980 | INFO     | PID=20763 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-10 12:19:04] 2025-10-10 16:18:35,980 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 12:19:04] 2025-10-10 16:18:35,981 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 12:19:04] 2025-10-10 16:18:35,981 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 12:19:04] 2025-10-10 16:18:57,341 | INFO     | [monitor] cgroup control has ended
[2025-10-10 12:19:04] 2025-10-10 16:18:59,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139831538399040)>', '<ExcThread(monitor, started 139830965032704)>']
[2025-10-10 12:19:04] 2025-10-10 16:18:59,081 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 12:19:04] 2025-10-10 16:18:59,081 | INFO     | [monitor] control thread has ended
[2025-10-10 12:19:04] 2025-10-10 16:19:04,078 | INFO     | all workflow threads have been joined
[2025-10-10 12:19:04] 2025-10-10 16:19:04,078 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 12:19:04] 2025-10-10 16:19:04,079 | INFO     | traces error code: 0
[2025-10-10 12:19:04] 2025-10-10 16:19:04,079 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 12:19:04] 2025-10-10 16:19:04,172 [wrapper] ==== pilot stdout END ====
[2025-10-10 12:19:04] 2025-10-10 16:19:04,176 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 12:19:04] 2025-10-10 16:19:04,180 [wrapper] pilotpid: 20763
[2025-10-10 12:19:04] 2025-10-10 16:19:04,184 [wrapper] Pilot exit status: 0
[2025-10-10 12:19:04] 2025-10-10 16:19:04,201 [wrapper] pandaids: 6837509157
[2025-10-10 12:19:04] 2025-10-10 16:19:04,249 [wrapper] cleanup supervisor_pilot 31804 20764
[2025-10-10 12:19:04] 2025-10-10 16:19:04,253 [wrapper] Test setup, not cleaning
[2025-10-10 12:19:04] 2025-10-10 16:19:04,257 [wrapper] apfmon messages muted
[2025-10-10 12:19:04] 2025-10-10 16:19:04,261 [wrapper] ==== wrapper stdout END ====
[2025-10-10 12:19:04] 2025-10-10 16:19:04,265 [wrapper] ==== wrapper stderr END ====
[2025-10-10 12:19:04]  *** Error codes and diagnostics ***
[2025-10-10 12:19:04]     "exeErrorCode": 0,
[2025-10-10 12:19:04]     "exeErrorDiag": "",
[2025-10-10 12:19:04]     "pilotErrorCode": 0,
[2025-10-10 12:19:04]     "pilotErrorDiag": "",
[2025-10-10 12:19:04]  *** Listing of results directory ***
[2025-10-10 12:19:04] total 412000
[2025-10-10 12:19:04] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 02:56 pilot3.tar.gz
[2025-10-10 12:19:04] -rwx------ 1 boincer umatlas     36292 Oct 10 03:08 runpilot2-wrapper.sh
[2025-10-10 12:19:04] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 03:08 queuedata.json
[2025-10-10 12:19:04] -rw-r--r-- 1 boincer umatlas       100 Oct 10 11:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 12:19:04] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 11:04 run_atlas
[2025-10-10 12:19:04] -rw-r--r-- 1 boincer umatlas       105 Oct 10 11:04 job.xml
[2025-10-10 12:19:04] -rw-r--r-- 2 boincer umatlas 219573568 Oct 10 11:04 EVNT.46676267._001401.pool.root.1
[2025-10-10 12:19:04] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 11:04 start_atlas.sh
[2025-10-10 12:19:04] drwxrwx--x 2 boincer umatlas      4096 Oct 10 11:04 shared
[2025-10-10 12:19:04] -rw-r--r-- 2 boincer umatlas    569676 Oct 10 11:04 input.tar.gz
[2025-10-10 12:19:04] -rw-r--r-- 1 boincer umatlas         0 Oct 10 11:04 boinc_lockfile
[2025-10-10 12:19:04] -rw-r--r-- 1 boincer umatlas      2547 Oct 10 11:04 pandaJob.out
[2025-10-10 12:19:04] -rw------- 1 boincer umatlas    975533 Oct 10 11:04 agis_schedconf.cvmfs.json
[2025-10-10 12:19:04] -rw------- 1 boincer umatlas   1560580 Oct 10 11:04 agis_ddmendpoints.agis.ALL.json
[2025-10-10 12:19:04] drwx------ 5 boincer umatlas      4096 Oct 10 11:04 pilot3
[2025-10-10 12:19:04] -rw------- 1 boincer umatlas 196401167 Oct 10 12:17 HITS.46676269._034430.pool.root.1
[2025-10-10 12:19:04] -rw-r--r-- 1 boincer umatlas       530 Oct 10 12:17 boinc_task_state.xml
[2025-10-10 12:19:04] -rw------- 1 boincer umatlas        95 Oct 10 12:17 pilot_heartbeat.json
[2025-10-10 12:19:04] -rw------- 1 boincer umatlas      1047 Oct 10 12:17 memory_monitor_summary.json
[2025-10-10 12:19:04] -rw------- 1 boincer umatlas    368906 Oct 10 12:17 log.46676269._034430.job.log.tgz.1
[2025-10-10 12:19:04] -rw------- 1 boincer umatlas      7850 Oct 10 12:18 heartbeat.json
[2025-10-10 12:19:04] -rw-r--r-- 1 boincer umatlas      5952 Oct 10 12:19 init_data.xml
[2025-10-10 12:19:04] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 12:19 boinc_mmap_file
[2025-10-10 12:19:04] -rw-r--r-- 1 boincer umatlas        27 Oct 10 12:19 wrapper_checkpoint.txt
[2025-10-10 12:19:04] -rw------- 1 boincer umatlas      4746 Oct 10 12:19 pilotlog.txt
[2025-10-10 12:19:04] -rw------- 1 boincer umatlas    638561 Oct 10 12:19 log.46676269._034430.job.log.1
[2025-10-10 12:19:04] -rw------- 1 boincer umatlas       357 Oct 10 12:19 output.list
[2025-10-10 12:19:04] -rw-r--r-- 1 boincer umatlas       620 Oct 10 12:19 runtime_log
[2025-10-10 12:19:04] -rw------- 1 boincer umatlas   1024000 Oct 10 12:19 result.tar.gz
[2025-10-10 12:19:04] -rw-r--r-- 1 boincer umatlas      8705 Oct 10 12:19 runtime_log.err
[2025-10-10 12:19:04] -rw------- 1 boincer umatlas       659 Oct 10 12:19 bhOMDmiPMR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmVVPMDmchRSRo.diag
[2025-10-10 12:19:04] -rw-r--r-- 1 boincer umatlas     21759 Oct 10 12:19 stderr.txt
[2025-10-10 12:19:04] HITS file was successfully produced:
[2025-10-10 12:19:04] -rw------- 1 boincer umatlas 196401167 Oct 10 12:17 shared/HITS.pool.root.1
[2025-10-10 12:19:04]  *** Contents of shared directory: ***
[2025-10-10 12:19:04] total 407808
[2025-10-10 12:19:04] -rw-r--r-- 2 boincer umatlas 219573568 Oct 10 11:04 ATLAS.root_0
[2025-10-10 12:19:04] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 11:04 start_atlas.sh
[2025-10-10 12:19:04] -rw-r--r-- 2 boincer umatlas    569676 Oct 10 11:04 input.tar.gz
[2025-10-10 12:19:04] -rw------- 1 boincer umatlas 196401167 Oct 10 12:17 HITS.pool.root.1
[2025-10-10 12:19:04] -rw------- 1 boincer umatlas   1024000 Oct 10 12:19 result.tar.gz
12:19:06 (17068): run_atlas exited; CPU time 46480.413689
12:19:06 (17068): called boinc_finish(0)

</stderr_txt>
]]>

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