Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:03:05 (560801): wrapper (7.7.26015): starting
11:03:05 (560801): wrapper: running run_atlas (--nthreads 10)
[2025-10-10 11:03:05] Arguments: --nthreads 10
[2025-10-10 11:03:05] Threads: 10
[2025-10-10 11:03:05] Checking for CVMFS
[2025-10-10 11:03:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 11:03:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 11:03:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 11:03:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 11:03:07] 2.13.2.0 3269412 33002 348180 151550 0 360 22796960 40960001 48427 16776704 0 411392374 99.837 175426818 37016 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 11:03:07] CVMFS is ok
[2025-10-10 11:03:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 11:03:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 11:03:07] Further information can be found at the LHC@home message board.
[2025-10-10 11:03:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 11:03:07] Checking for apptainer binary...
[2025-10-10 11:03:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 11:03:07] Running /usr/bin/apptainer --version
[2025-10-10 11:03:07] apptainer version 1.4.3-1.el9
[2025-10-10 11:03:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 11:03:07] c8-16-2.aglt2.org
[2025-10-10 11:03:07] apptainer works
[2025-10-10 11:03:07] Set ATHENA_PROC_NUMBER=10
[2025-10-10 11:03:07] Set ATHENA_CORE_NUMBER=10
[2025-10-10 11:03:07] Starting ATLAS job with PandaID=6826766598
[2025-10-10 11:03:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 12:21:16]  *** The last 200 lines of the pilot log: ***
[2025-10-10 12:21:16] 2025-10-10 16:20:04,176 | INFO     | log transfer has been attempted: DONE
[2025-10-10 12:21:16] 2025-10-10 16:20:04,176 | INFO     | job 6826766598 has finished - writing final server update
[2025-10-10 12:21:16] 2025-10-10 16:20:04,176 | INFO     | total number of processed events: 400 (read)
[2025-10-10 12:21:16] 2025-10-10 16:20:04,188 | INFO     | executing command: lscpu
[2025-10-10 12:21:16] 2025-10-10 16:20:04,262 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 12:21:16] 2025-10-10 16:20:04,677 | INFO     | time since job start (4563s) is within the limit (172800.0s)
[2025-10-10 12:21:16] 2025-10-10 16:20:06,489 | INFO     | monitor loop #292: job 0:6826766598 is in state 'finished'
[2025-10-10 12:21:16] 2025-10-10 16:20:06,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:21:16] 2025-10-10 16:20:06,685 | INFO     | time since job start (4565s) is within the limit (172800.0s)
[2025-10-10 12:21:16] 2025-10-10 16:20:08,714 | INFO     | time since job start (4567s) is within the limit (172800.0s)
[2025-10-10 12:21:16] 2025-10-10 16:20:09,002 | INFO     | monitor loop #293: job 0:6826766598 is in state 'finished'
[2025-10-10 12:21:16] 2025-10-10 16:20:09,002 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:21:16] 2025-10-10 16:20:10,720 | INFO     | time since job start (4569s) is within the limit (172800.0s)
[2025-10-10 12:21:16] 2025-10-10 16:20:11,513 | INFO     | monitor loop #294: job 0:6826766598 is in state 'finished'
[2025-10-10 12:21:16] 2025-10-10 16:20:11,513 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:21:16] 2025-10-10 16:20:12,726 | INFO     | time since job start (4571s) is within the limit (172800.0s)
[2025-10-10 12:21:16] 2025-10-10 16:20:14,018 | INFO     | monitor loop #295: job 0:6826766598 is in state 'finished'
[2025-10-10 12:21:16] 2025-10-10 16:20:14,018 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:21:16] 2025-10-10 16:20:14,733 | INFO     | time since job start (4573s) is within the limit (172800.0s)
[2025-10-10 12:21:16] 2025-10-10 16:20:16,523 | INFO     | monitor loop #296: job 0:6826766598 is in state 'finished'
[2025-10-10 12:21:16] 2025-10-10 16:20:16,523 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:21:16] 2025-10-10 16:20:16,740 | INFO     | time since job start (4575s) is within the limit (172800.0s)
[2025-10-10 12:21:16] 2025-10-10 16:20:18,746 | INFO     | time since job start (4577s) is within the limit (172800.0s)
[2025-10-10 12:21:16] 2025-10-10 16:20:19,028 | INFO     | monitor loop #297: job 0:6826766598 is in state 'finished'
[2025-10-10 12:21:16] 2025-10-10 16:20:19,028 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:21:16] 2025-10-10 16:20:20,755 | INFO     | time since job start (4579s) is within the limit (172800.0s)
[2025-10-10 12:21:16] 2025-10-10 16:20:21,535 | INFO     | monitor loop #298: job 0:6826766598 is in state 'finished'
[2025-10-10 12:21:16] 2025-10-10 16:20:21,535 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:21:16] 2025-10-10 16:20:22,762 | INFO     | time since job start (4581s) is within the limit (172800.0s)
[2025-10-10 12:21:16] 2025-10-10 16:20:24,070 | INFO     | monitor loop #299: job 0:6826766598 is in state 'finished'
[2025-10-10 12:21:16] 2025-10-10 16:20:24,070 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:21:16] 2025-10-10 16:20:24,770 | INFO     | time since job start (4583s) is within the limit (172800.0s)
[2025-10-10 12:21:16] 2025-10-10 16:20:26,577 | INFO     | monitor loop #300: job 0:6826766598 is in state 'finished'
[2025-10-10 12:21:16] 2025-10-10 16:20:26,577 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 12:21:16] 2025-10-10 16:20:27,480 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 12:21:16] 2025-10-10 16:20:27,537 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.989257812494
[2025-10-10 12:21:16] 2025-10-10 16:20:27,685 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6826766598/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 12:21:16] 2025-10-10 16:20:27,685 | INFO     | extracted standard info from prmon json
[2025-10-10 12:21:16] 2025-10-10 16:20:27,686 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 12:21:16] 2025-10-10 16:20:27,686 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 12:21:16] 2025-10-10 16:20:27,686 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 12:21:16] 2025-10-10 16:20:27,686 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 12:21:16] 2025-10-10 16:20:27,720 | INFO     | fitting pss+swap vs Time
[2025-10-10 12:21:16] 2025-10-10 16:20:27,720 | INFO     | sum of square deviations: 89128168.48484845
[2025-10-10 12:21:16] 2025-10-10 16:20:27,720 | INFO     | sum of deviations: -169257432.909091
[2025-10-10 12:21:16] 2025-10-10 16:20:27,720 | INFO     | mean x: 1760111040.5151515
[2025-10-10 12:21:16] 2025-10-10 16:20:27,720 | INFO     | mean y: 2224782.409090909
[2025-10-10 12:21:16] 2025-10-10 16:20:27,720 | INFO     | -- intersect: 3344735701.425539
[2025-10-10 12:21:16] 2025-10-10 16:20:27,720 | INFO     | intersect: 3344735701.425539
[2025-10-10 12:21:16] 2025-10-10 16:20:27,720 | INFO     | chi2: 0.03559379213633715
[2025-10-10 12:21:16] 2025-10-10 16:20:27,720 | INFO     | -- intersect: 3344735701.425539
[2025-10-10 12:21:16] 2025-10-10 16:20:27,720 | INFO     | current memory leak: -1.90 B/s (using 66 data points, chi2=0.04)
[2025-10-10 12:21:16] 2025-10-10 16:20:27,721 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2025-10-10 12:21:16] 2025-10-10 16:20:27,721 | INFO     | ..............................
[2025-10-10 12:21:16] 2025-10-10 16:20:27,721 | INFO     | . Timing measurements:
[2025-10-10 12:21:16] 2025-10-10 16:20:27,721 | INFO     | . get job = 0 s
[2025-10-10 12:21:16] 2025-10-10 16:20:27,721 | INFO     | . initial setup = 5 s
[2025-10-10 12:21:16] 2025-10-10 16:20:27,721 | INFO     | . payload setup = 33 s
[2025-10-10 12:21:16] 2025-10-10 16:20:27,721 | INFO     | . stage-in = 0 s
[2025-10-10 12:21:16] 2025-10-10 16:20:27,721 | INFO     | . payload execution = 4461 s
[2025-10-10 12:21:16] 2025-10-10 16:20:27,721 | INFO     | . stage-out = 3 s
[2025-10-10 12:21:16] 2025-10-10 16:20:27,721 | INFO     | . log creation = 0 s
[2025-10-10 12:21:16] 2025-10-10 16:20:27,721 | INFO     | ..............................
[2025-10-10 12:21:16] 2025-10-10 16:20:28,433 | INFO     | 
[2025-10-10 12:21:16] 2025-10-10 16:20:28,433 | INFO     | job summary report
[2025-10-10 12:21:16] 2025-10-10 16:20:28,433 | INFO     | --------------------------------------------------
[2025-10-10 12:21:16] 2025-10-10 16:20:28,433 | INFO     | PanDA job id: 6826766598
[2025-10-10 12:21:16] 2025-10-10 16:20:28,433 | INFO     | task id: 46373048
[2025-10-10 12:21:16] 2025-10-10 16:20:28,433 | INFO     | errors: (none)
[2025-10-10 12:21:16] 2025-10-10 16:20:28,433 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 12:21:16] 2025-10-10 16:20:28,433 | INFO     | pilot state: finished 
[2025-10-10 12:21:16] 2025-10-10 16:20:28,433 | INFO     | transexitcode: 0
[2025-10-10 12:21:16] 2025-10-10 16:20:28,434 | INFO     | exeerrorcode: 0
[2025-10-10 12:21:16] 2025-10-10 16:20:28,434 | INFO     | exeerrordiag: 
[2025-10-10 12:21:16] 2025-10-10 16:20:28,434 | INFO     | exitcode: 0
[2025-10-10 12:21:16] 2025-10-10 16:20:28,434 | INFO     | exitmsg: OK
[2025-10-10 12:21:16] 2025-10-10 16:20:28,434 | INFO     | cpuconsumptiontime: 28124 s
[2025-10-10 12:21:16] 2025-10-10 16:20:28,434 | INFO     | nevents: 400
[2025-10-10 12:21:16] 2025-10-10 16:20:28,434 | INFO     | neventsw: 0
[2025-10-10 12:21:16] 2025-10-10 16:20:28,434 | INFO     | pid: 583473
[2025-10-10 12:21:16] 2025-10-10 16:20:28,434 | INFO     | pgrp: 583473
[2025-10-10 12:21:16] 2025-10-10 16:20:28,434 | INFO     | corecount: 10
[2025-10-10 12:21:16] 2025-10-10 16:20:28,434 | INFO     | event service: False
[2025-10-10 12:21:16] 2025-10-10 16:20:28,434 | INFO     | sizes: {0: 2348840, 11: 2348840, 22: 2348868, 27: 2349158, 32: 2349186, 4498: 2375264, 4499: 2375391, 4503: 2384501, 4529: 2384639}
[2025-10-10 12:21:16] 2025-10-10 16:20:28,434 | INFO     | --------------------------------------------------
[2025-10-10 12:21:16] 2025-10-10 16:20:28,434 | INFO     | 
[2025-10-10 12:21:16] 2025-10-10 16:20:28,434 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-10 12:21:16] 2025-10-10 16:20:28,527 | INFO     | PID=570667 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 12:21:16] 2025-10-10 16:20:28,531 | INFO     | .. there are 73 such processes running
[2025-10-10 12:21:16] 2025-10-10 16:20:28,531 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 12:21:16] 2025-10-10 16:20:28,531 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | job 6826766598 has completed (purged errors)
[2025-10-10 12:21:16] 2025-10-10 16:20:28,532 | INFO     | overall cleanup function is called
[2025-10-10 12:21:16] 2025-10-10 16:20:29,545 | INFO     | --- collectZombieJob: --- 10, [583473]
[2025-10-10 12:21:16] 2025-10-10 16:20:29,545 | INFO     | zombie collector waiting for pid 583473
[2025-10-10 12:21:16] 2025-10-10 16:20:29,545 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 12:21:16] 2025-10-10 16:20:29,545 | INFO     | collected zombie processes
[2025-10-10 12:21:16] 2025-10-10 16:20:29,545 | INFO     | will attempt to kill all subprocesses of pid=583473
[2025-10-10 12:21:16] 2025-10-10 16:20:31,954 | INFO     | process IDs to be killed: [583473] (in reverse order)
[2025-10-10 12:21:16] 2025-10-10 16:20:33,499 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 12:21:16] 2025-10-10 16:20:33,499 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 12:21:16] 2025-10-10 16:20:33,957 | INFO     | did not find any defunct processes belonging to 583473
[2025-10-10 12:21:16] 2025-10-10 16:20:34,029 | INFO     | did not find any defunct processes belonging to 583473
[2025-10-10 12:21:16] 2025-10-10 16:20:34,029 | INFO     | ready for new job
[2025-10-10 12:21:16] 2025-10-10 16:20:34,029 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 12:21:16] 2025-10-10 16:20:34,036 | INFO     | ***************************************
[2025-10-10 12:21:16] 2025-10-10 16:20:34,036 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 12:21:16] 2025-10-10 16:20:34,036 | INFO     | ***************************************
[2025-10-10 12:21:16] 2025-10-10 16:20:34,036 | INFO     | 
[2025-10-10 12:21:16] 2025-10-10 16:20:34,044 | INFO     | architecture information:
[2025-10-10 12:21:16] 2025-10-10 16:20:34,045 | INFO     | executing command: cat /etc/os-release
[2025-10-10 12:21:16] 2025-10-10 16:20:34,097 | INFO     | cat /etc/os-release:
[2025-10-10 12:21:16] NAME="CentOS Linux"
[2025-10-10 12:21:16] VERSION="7 (Core)"
[2025-10-10 12:21:16] ID="centos"
[2025-10-10 12:21:16] ID_LIKE="rhel fedora"
[2025-10-10 12:21:16] VERSION_ID="7"
[2025-10-10 12:21:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 12:21:16] ANSI_COLOR="0;31"
[2025-10-10 12:21:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 12:21:16] HOME_URL="https://www.centos.org/"
[2025-10-10 12:21:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 12:21:16] 
[2025-10-10 12:21:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 12:21:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 12:21:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 12:21:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 12:21:16] 
[2025-10-10 12:21:16] 2025-10-10 16:20:34,097 | INFO     | ***************************************
[2025-10-10 12:21:16] 2025-10-10 16:20:34,601 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-10 12:21:16] 2025-10-10 16:20:34,663 | INFO     | sufficient remaining disk space (168699101184 B)
[2025-10-10 12:21:16] 2025-10-10 16:20:34,664 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 12:21:16] 2025-10-10 16:20:34,664 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 12:21:16] 2025-10-10 16:20:34,664 | INFO     | update_server=False
[2025-10-10 12:21:16] 2025-10-10 16:20:34,664 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 12:21:16] 2025-10-10 16:20:34,971 | INFO     | all data control threads have been joined
[2025-10-10 12:21:16] 2025-10-10 16:20:35,040 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 12:21:16] 2025-10-10 16:20:35,377 | INFO     | all payload control threads have been joined
[2025-10-10 12:21:16] 2025-10-10 16:20:35,458 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:21:16] 2025-10-10 16:20:35,458 | INFO     | aborting loop
[2025-10-10 12:21:16] 2025-10-10 16:20:35,466 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 12:21:16] 2025-10-10 16:20:35,670 | INFO     | [job] retrieve thread has finished
[2025-10-10 12:21:16] 2025-10-10 16:20:35,698 | INFO     | all job control threads have been joined
[2025-10-10 12:21:16] 2025-10-10 16:20:35,977 | INFO     | [data] control thread has finished
[2025-10-10 12:21:16] 2025-10-10 16:20:36,058 | INFO     | [payload] failed_post thread has finished
[2025-10-10 12:21:16] 2025-10-10 16:20:36,151 | INFO     | [payload] validate_post thread has finished
[2025-10-10 12:21:16] 2025-10-10 16:20:36,383 | INFO     | [payload] control thread has finished
[2025-10-10 12:21:16] 2025-10-10 16:20:36,464 | INFO     | [job] job monitor thread has finished
[2025-10-10 12:21:16] 2025-10-10 16:20:36,670 | INFO     | [job] validate thread has finished
[2025-10-10 12:21:16] 2025-10-10 16:20:36,670 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 12:21:16] 2025-10-10 16:20:36,704 | INFO     | [job] control thread has finished
[2025-10-10 12:21:16] 2025-10-10 16:20:36,821 | INFO     | [data] copytool_in thread has finished
[2025-10-10 12:21:16] 2025-10-10 16:20:36,821 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 12:21:16] 2025-10-10 16:20:36,822 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 12:21:16] 2025-10-10 16:20:36,822 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 12:21:16] 2025-10-10 16:20:37,047 | INFO     | [data] copytool_out thread has finished
[2025-10-10 12:21:16] 2025-10-10 16:20:37,227 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 12:21:16] 2025-10-10 16:20:38,232 | INFO     | [job] queue monitor thread has finished
[2025-10-10 12:21:16] 2025-10-10 16:20:39,479 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 12:21:16] 2025-10-10 16:21:02,195 | INFO     | PID=570667 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 12:21:16] 2025-10-10 16:21:02,196 | INFO     | .. there are 73 such processes running
[2025-10-10 12:21:16] 2025-10-10 16:21:02,201 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 12:21:16] 2025-10-10 16:21:02,201 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 12:21:16] 2025-10-10 16:21:02,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 12:21:16] 2025-10-10 16:21:08,962 | INFO     | [monitor] cgroup control has ended
[2025-10-10 12:21:16] 2025-10-10 16:21:09,884 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140163933062976)>', '<ExcThread(monitor, started 140163296519936)>']
[2025-10-10 12:21:16] 2025-10-10 16:21:10,267 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 12:21:16] 2025-10-10 16:21:10,267 | INFO     | [monitor] control thread has ended
[2025-10-10 12:21:16] 2025-10-10 16:21:14,910 | INFO     | all workflow threads have been joined
[2025-10-10 12:21:16] 2025-10-10 16:21:14,910 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 12:21:16] 2025-10-10 16:21:14,910 | INFO     | traces error code: 0
[2025-10-10 12:21:16] 2025-10-10 16:21:14,910 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 12:21:16] 2025-10-10 16:21:15,183 [wrapper] ==== pilot stdout END ====
[2025-10-10 12:21:16] 2025-10-10 16:21:15,195 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 12:21:16] 2025-10-10 16:21:15,207 [wrapper] pilotpid: 570667
[2025-10-10 12:21:16] 2025-10-10 16:21:15,217 [wrapper] Pilot exit status: 0
[2025-10-10 12:21:16] 2025-10-10 16:21:15,280 [wrapper] pandaids: 6826766598
[2025-10-10 12:21:16] 2025-10-10 16:21:15,631 [wrapper] cleanup supervisor_pilot 1315084 570668
[2025-10-10 12:21:16] 2025-10-10 16:21:15,687 [wrapper] Test setup, not cleaning
[2025-10-10 12:21:16] 2025-10-10 16:21:15,731 [wrapper] apfmon messages muted
[2025-10-10 12:21:16] 2025-10-10 16:21:15,749 [wrapper] ==== wrapper stdout END ====
[2025-10-10 12:21:16] 2025-10-10 16:21:15,765 [wrapper] ==== wrapper stderr END ====
[2025-10-10 12:21:16]  *** Error codes and diagnostics ***
[2025-10-10 12:21:16]     "exeErrorCode": 0,
[2025-10-10 12:21:16]     "exeErrorDiag": "",
[2025-10-10 12:21:16]     "pilotErrorCode": 0,
[2025-10-10 12:21:16]     "pilotErrorDiag": "",
[2025-10-10 12:21:16]  *** Listing of results directory ***
[2025-10-10 12:21:16] total 415884
[2025-10-10 12:21:16] -rw-r--r--. 1 boincer umatlas    552446 Oct  1 22:50 pilot3.tar.gz
[2025-10-10 12:21:16] -rw-r--r--. 1 boincer umatlas      5112 Oct  1 22:51 queuedata.json
[2025-10-10 12:21:16] -rwx------. 1 boincer umatlas     36292 Oct  1 22:52 runpilot2-wrapper.sh
[2025-10-10 12:21:16] -rw-r--r--. 1 boincer umatlas       100 Oct 10 11:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 12:21:16] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 11:03 run_atlas
[2025-10-10 12:21:16] -rw-r--r--. 1 boincer umatlas       105 Oct 10 11:03 job.xml
[2025-10-10 12:21:16] -rw-r--r--. 2 boincer umatlas 221061016 Oct 10 11:03 EVNT.46373045._003159.pool.root.1
[2025-10-10 12:21:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 11:03 start_atlas.sh
[2025-10-10 12:21:16] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 11:03 shared
[2025-10-10 12:21:16] -rw-r--r--. 2 boincer umatlas    565602 Oct 10 11:03 input.tar.gz
[2025-10-10 12:21:16] -rw-r--r--. 1 boincer umatlas         0 Oct 10 11:03 boinc_lockfile
[2025-10-10 12:21:16] -rw-r--r--. 1 boincer umatlas      2537 Oct 10 11:03 pandaJob.out
[2025-10-10 12:21:16] -rw-------. 1 boincer umatlas    975533 Oct 10 11:03 agis_schedconf.cvmfs.json
[2025-10-10 12:21:16] -rw-------. 1 boincer umatlas   1560580 Oct 10 11:03 agis_ddmendpoints.agis.ALL.json
[2025-10-10 12:21:16] drwx------. 4 boincer umatlas      4096 Oct 10 11:04 pilot3
[2025-10-10 12:21:16] -rw-------. 1 boincer umatlas 199011094 Oct 10 12:19 HITS.46373048._091891.pool.root.1
[2025-10-10 12:21:16] -rw-r--r--. 1 boincer umatlas       529 Oct 10 12:19 boinc_task_state.xml
[2025-10-10 12:21:16] -rw-------. 1 boincer umatlas      1034 Oct 10 12:19 memory_monitor_summary.json
[2025-10-10 12:21:16] -rw-------. 1 boincer umatlas    343526 Oct 10 12:19 log.46373048._091891.job.log.tgz.1
[2025-10-10 12:21:16] -rw-r--r--. 1 boincer umatlas      7162 Oct 10 12:20 init_data.xml
[2025-10-10 12:21:16] -rw-------. 1 boincer umatlas      7779 Oct 10 12:20 heartbeat.json
[2025-10-10 12:21:16] -rw-------. 1 boincer umatlas        95 Oct 10 12:21 pilot_heartbeat.json
[2025-10-10 12:21:16] -rw-r--r--. 1 boincer umatlas        27 Oct 10 12:21 wrapper_checkpoint.txt
[2025-10-10 12:21:16] -rw-------. 1 boincer umatlas      4824 Oct 10 12:21 pilotlog.txt
[2025-10-10 12:21:16] -rw-------. 1 boincer umatlas    609911 Oct 10 12:21 log.46373048._091891.job.log.1
[2025-10-10 12:21:16] -rw-------. 1 boincer umatlas       357 Oct 10 12:21 output.list
[2025-10-10 12:21:16] -rw-r--r--. 1 boincer umatlas       620 Oct 10 12:21 runtime_log
[2025-10-10 12:21:16] -rw-------. 1 boincer umatlas    972800 Oct 10 12:21 result.tar.gz
[2025-10-10 12:21:16] -rw-r--r--. 1 boincer umatlas      8700 Oct 10 12:21 runtime_log.err
[2025-10-10 12:21:16] -rw-------. 1 boincer umatlas       651 Oct 10 12:21 MpBNDmjbOO8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjh8LDmS7iUGm.diag
[2025-10-10 12:21:16] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 12:21 boinc_mmap_file
[2025-10-10 12:21:16] -rw-r--r--. 1 boincer umatlas     22334 Oct 10 12:21 stderr.txt
[2025-10-10 12:21:16] HITS file was successfully produced:
[2025-10-10 12:21:16] -rw-------. 1 boincer umatlas 199011094 Oct 10 12:19 shared/HITS.pool.root.1
[2025-10-10 12:21:16]  *** Contents of shared directory: ***
[2025-10-10 12:21:16] total 411756
[2025-10-10 12:21:16] -rw-r--r--. 2 boincer umatlas 221061016 Oct 10 11:03 ATLAS.root_0
[2025-10-10 12:21:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 11:03 start_atlas.sh
[2025-10-10 12:21:16] -rw-r--r--. 2 boincer umatlas    565602 Oct 10 11:03 input.tar.gz
[2025-10-10 12:21:16] -rw-------. 1 boincer umatlas 199011094 Oct 10 12:19 HITS.pool.root.1
[2025-10-10 12:21:16] -rw-------. 1 boincer umatlas    972800 Oct 10 12:21 result.tar.gz
12:21:17 (560801): run_atlas exited; CPU time 28295.335866
12:21:17 (560801): called boinc_finish(0)

</stderr_txt>
]]>

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