Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:10:31 (2155746): wrapper (7.7.26015): starting
18:10:31 (2155746): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 18:10:31] Arguments: --nthreads 4
[2025-10-11 18:10:31] Threads: 4
[2025-10-11 18:10:31] Checking for CVMFS
[2025-10-11 18:10:31] No cvmfs_config command found, will try listing directly
[2025-10-11 18:10:31] CVMFS is ok
[2025-10-11 18:10:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:10:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 18:10:31] Further information can be found at the LHC@home message board.
[2025-10-11 18:10:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:10:31] Checking for apptainer binary...
[2025-10-11 18:10:31] which: no apptainer in ((null))
[2025-10-11 18:10:31] apptainer is not installed, using version from CVMFS
[2025-10-11 18:10:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:10:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-10-11 18:10:31] apptainer works
[2025-10-11 18:10:31] Set ATHENA_PROC_NUMBER=4
[2025-10-11 18:10:31] Set ATHENA_CORE_NUMBER=4
[2025-10-11 18:10:31] Starting ATLAS job with PandaID=6837450181
[2025-10-11 18:10:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:26:42 (2381574): wrapper (7.7.26015): starting
19:26:42 (2381574): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 19:26:42] Arguments: --nthreads 4
[2025-10-11 19:26:42] Threads: 4
[2025-10-11 19:26:42] This job has been restarted, cleaning up previous attempt
[2025-10-11 19:26:42] Checking for CVMFS
[2025-10-11 19:26:42] No cvmfs_config command found, will try listing directly
[2025-10-11 19:26:42] CVMFS is ok
[2025-10-11 19:26:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:26:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:26:42] Further information can be found at the LHC@home message board.
[2025-10-11 19:26:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:26:42] Checking for apptainer binary...
[2025-10-11 19:26:42] which: no apptainer in ((null))
[2025-10-11 19:26:42] apptainer is not installed, using version from CVMFS
[2025-10-11 19:26:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:26:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-10-11 19:26:42] apptainer works
[2025-10-11 19:26:42] Set ATHENA_PROC_NUMBER=4
[2025-10-11 19:26:42] Set ATHENA_CORE_NUMBER=4
[2025-10-11 19:26:42] Starting ATLAS job with PandaID=6837450181
[2025-10-11 19:26:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:14:27]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:14:27] 2025-10-11 20:03:38,981 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 22:14:27] 2025-10-11 20:03:38,984 | INFO     | fitting pss+swap vs Time
[2025-10-11 22:14:27] 2025-10-11 20:03:38,985 | INFO     | sum of square deviations: 1132458442.5
[2025-10-11 22:14:27] 2025-10-11 20:03:38,986 | INFO     | sum of deviations: -35406282124.49999
[2025-10-11 22:14:27] 2025-10-11 20:03:38,986 | INFO     | mean x: 1760208318.5
[2025-10-11 22:14:27] 2025-10-11 20:03:38,986 | INFO     | mean y: 2387755.525974026
[2025-10-11 22:14:27] 2025-10-11 20:03:38,986 | INFO     | -- intersect: 55035252524.60357
[2025-10-11 22:14:27] 2025-10-11 20:03:38,986 | INFO     | intersect: 55035252524.60357
[2025-10-11 22:14:27] 2025-10-11 20:03:38,986 | INFO     | chi2: 2.3613262579954393
[2025-10-11 22:14:27] 2025-10-11 20:03:38,987 | INFO     | sum of square deviations: 1025693650.0
[2025-10-11 22:14:27] 2025-10-11 20:03:38,987 | INFO     | sum of deviations: -24335331338.000004
[2025-10-11 22:14:27] 2025-10-11 20:03:38,987 | INFO     | mean x: 1760208166.0
[2025-10-11 22:14:27] 2025-10-11 20:03:38,988 | INFO     | mean y: 2403206.6577181206
[2025-10-11 22:14:27] 2025-10-11 20:03:38,988 | INFO     | -- intersect: 41764628158.97492
[2025-10-11 22:14:27] 2025-10-11 20:03:38,988 | INFO     | intersect: 41764628158.97492
[2025-10-11 22:14:27] 2025-10-11 20:03:38,988 | INFO     | chi2: 1.5645836931011443
[2025-10-11 22:14:27] 2025-10-11 20:03:38,988 | INFO     | current chi2=1.5645836931011443 (change=33.74131644013734 %)
[2025-10-11 22:14:27] 2025-10-11 20:03:38,988 | INFO     | sum of square deviations: 925859220.0
[2025-10-11 22:14:27] 2025-10-11 20:03:38,989 | INFO     | sum of deviations: -23111064448.99999
[2025-10-11 22:14:27] 2025-10-11 20:03:38,989 | INFO     | mean x: 1760208013.5
[2025-10-11 22:14:27] 2025-10-11 20:03:38,989 | INFO     | mean y: 2405077.4583333335
[2025-10-11 22:14:27] 2025-10-11 20:03:38,989 | INFO     | -- intersect: 43940273778.106735
[2025-10-11 22:14:27] 2025-10-11 20:03:38,990 | INFO     | intersect: 43940273778.106735
[2025-10-11 22:14:27] 2025-10-11 20:03:38,990 | INFO     | chi2: 1.5580795308321242
[2025-10-11 22:14:27] 2025-10-11 20:03:38,990 | INFO     | current chi2=1.5580795308321242 (change=0.4157120068232486 %)
[2025-10-11 22:14:27] 2025-10-11 20:03:38,990 | INFO     | right removable region: 143
[2025-10-11 22:14:27] 2025-10-11 20:03:38,990 | INFO     | sum of square deviations: 1025693650.0
[2025-10-11 22:14:27] 2025-10-11 20:03:38,991 | INFO     | sum of deviations: -50622089947.0
[2025-10-11 22:14:27] 2025-10-11 20:03:38,991 | INFO     | mean x: 1760208471.0
[2025-10-11 22:14:27] 2025-10-11 20:03:38,991 | INFO     | mean y: 2408959.845637584
[2025-10-11 22:14:27] 2025-10-11 20:03:38,991 | INFO     | -- intersect: 86875747353.26686
[2025-10-11 22:14:27] 2025-10-11 20:03:38,992 | INFO     | intersect: 86875747353.26686
[2025-10-11 22:14:27] 2025-10-11 20:03:38,992 | INFO     | chi2: 1.133625747957022
[2025-10-11 22:14:27] 2025-10-11 20:03:38,992 | INFO     | current chi2=1.133625747957022 (change=51.99198992013193 %)
[2025-10-11 22:14:27] 2025-10-11 20:03:38,992 | INFO     | sum of square deviations: 925859220.0
[2025-10-11 22:14:27] 2025-10-11 20:03:38,993 | INFO     | sum of deviations: -44025917716.0
[2025-10-11 22:14:27] 2025-10-11 20:03:38,993 | INFO     | mean x: 1760208623.5
[2025-10-11 22:14:27] 2025-10-11 20:03:38,993 | INFO     | mean y: 2398871.0
[2025-10-11 22:14:27] 2025-10-11 20:03:38,993 | INFO     | -- intersect: 83702812872.60667
[2025-10-11 22:14:27] 2025-10-11 20:03:38,994 | INFO     | intersect: 83702812872.60667
[2025-10-11 22:14:27] 2025-10-11 20:03:38,994 | INFO     | chi2: 1.1250614983607106
[2025-10-11 22:14:27] 2025-10-11 20:03:38,994 | INFO     | current chi2=1.1250614983607106 (change=0.755474159946136 %)
[2025-10-11 22:14:27] 2025-10-11 20:03:38,994 | INFO     | left removable region: 20
[2025-10-11 22:14:27] 2025-10-11 20:03:38,994 | INFO     | sum of square deviations: 576985702.0
[2025-10-11 22:14:27] 2025-10-11 20:03:38,995 | INFO     | sum of deviations: -19270265939.000008
[2025-10-11 22:14:27] 2025-10-11 20:03:38,995 | INFO     | mean x: 1760208593.0
[2025-10-11 22:14:27] 2025-10-11 20:03:38,995 | INFO     | mean y: 2393866.536585366
[2025-10-11 22:14:27] 2025-10-11 20:03:38,995 | INFO     | -- intersect: 58790137787.482185
[2025-10-11 22:14:27] 2025-10-11 20:03:38,995 | INFO     | intersect: 58790137787.482185
[2025-10-11 22:14:27] 2025-10-11 20:03:38,996 | INFO     | chi2: 0.24316072689983287
[2025-10-11 22:14:27] 2025-10-11 20:03:38,996 | INFO     | -- intersect: 58790137787.482185
[2025-10-11 22:14:27] 2025-10-11 20:03:38,996 | INFO     | current memory leak: -33.40 B/s (using 123 data points, chi2=0.24)
[2025-10-11 22:14:27] 2025-10-11 20:03:38,996 | INFO     | could have reported an average CPU frequency of 2708 MHz (9 samples)
[2025-10-11 22:14:27] 2025-10-11 20:03:38,996 | INFO     | ..............................
[2025-10-11 22:14:27] 2025-10-11 20:03:38,997 | INFO     | . Timing measurements:
[2025-10-11 22:14:27] 2025-10-11 20:03:38,997 | INFO     | . get job = 0 s
[2025-10-11 22:14:27] 2025-10-11 20:03:38,997 | INFO     | . initial setup = 1 s
[2025-10-11 22:14:27] 2025-10-11 20:03:38,997 | INFO     | . payload setup = 9 s
[2025-10-11 22:14:27] 2025-10-11 20:03:38,997 | INFO     | . stage-in = 0 s
[2025-10-11 22:14:27] 2025-10-11 20:03:38,997 | INFO     | . payload execution = 9360 s
[2025-10-11 22:14:27] 2025-10-11 20:03:38,997 | INFO     | . stage-out = 1 s
[2025-10-11 22:14:27] 2025-10-11 20:03:38,997 | INFO     | . log creation = 0 s
[2025-10-11 22:14:27] 2025-10-11 20:03:38,997 | INFO     | ..............................
[2025-10-11 22:14:27] 2025-10-11 20:03:39,153 | INFO     | 
[2025-10-11 22:14:27] 2025-10-11 20:03:39,153 | INFO     | job summary report
[2025-10-11 22:14:27] 2025-10-11 20:03:39,153 | INFO     | --------------------------------------------------
[2025-10-11 22:14:27] 2025-10-11 20:03:39,153 | INFO     | PanDA job id: 6837450181
[2025-10-11 22:14:27] 2025-10-11 20:03:39,154 | INFO     | task id: 46676269
[2025-10-11 22:14:27] 2025-10-11 20:03:39,154 | INFO     | errors: (none)
[2025-10-11 22:14:27] 2025-10-11 20:03:39,154 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:14:27] 2025-10-11 20:03:39,154 | INFO     | pilot state: finished 
[2025-10-11 22:14:27] 2025-10-11 20:03:39,154 | INFO     | transexitcode: 0
[2025-10-11 22:14:27] 2025-10-11 20:03:39,154 | INFO     | exeerrorcode: 0
[2025-10-11 22:14:27] 2025-10-11 20:03:39,154 | INFO     | exeerrordiag: 
[2025-10-11 22:14:27] 2025-10-11 20:03:39,154 | INFO     | exitcode: 0
[2025-10-11 22:14:27] 2025-10-11 20:03:39,154 | INFO     | exitmsg: OK
[2025-10-11 22:14:27] 2025-10-11 20:03:39,154 | INFO     | cpuconsumptiontime: 36138 s
[2025-10-11 22:14:27] 2025-10-11 20:03:39,154 | INFO     | nevents: 400
[2025-10-11 22:14:27] 2025-10-11 20:03:39,155 | INFO     | neventsw: 0
[2025-10-11 22:14:27] 2025-10-11 20:03:39,155 | INFO     | pid: 2392923
[2025-10-11 22:14:27] 2025-10-11 20:03:39,155 | INFO     | pgrp: 2392923
[2025-10-11 22:14:27] 2025-10-11 20:03:39,155 | INFO     | corecount: 4
[2025-10-11 22:14:27] 2025-10-11 20:03:39,155 | INFO     | event service: False
[2025-10-11 22:14:27] 2025-10-11 20:03:39,155 | INFO     | sizes: {0: 2348697, 1: 2348896, 8: 2349158, 11: 2349186, 9374: 2377881, 9376: 2386901, 9377: 2387085, 9384: 2387343}
[2025-10-11 22:14:27] 2025-10-11 20:03:39,155 | INFO     | --------------------------------------------------
[2025-10-11 22:14:27] 2025-10-11 20:03:39,155 | INFO     | 
[2025-10-11 22:14:27] 2025-10-11 20:03:39,155 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2025-10-11 22:14:27] 2025-10-11 20:03:39,184 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:14:27] 2025-10-11 20:03:39,184 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:14:27] 2025-10-11 20:03:39,184 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:14:27] 2025-10-11 20:03:39,185 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:14:27] 2025-10-11 20:03:39,185 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:14:27] 2025-10-11 20:03:39,185 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:14:27] 2025-10-11 20:03:39,185 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:14:27] 2025-10-11 20:03:39,185 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:14:27] 2025-10-11 20:03:39,185 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:14:27] 2025-10-11 20:03:39,185 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:14:27] 2025-10-11 20:03:39,185 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:14:27] 2025-10-11 20:03:39,185 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:14:27] 2025-10-11 20:03:39,185 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:14:27] 2025-10-11 20:03:39,186 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:14:27] 2025-10-11 20:03:39,186 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:14:27] 2025-10-11 20:03:39,186 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:14:27] 2025-10-11 20:03:39,186 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:14:27] 2025-10-11 20:03:39,186 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:14:27] 2025-10-11 20:03:39,186 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:14:27] 2025-10-11 20:03:39,186 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:14:27] 2025-10-11 20:03:39,186 | INFO     | job 6837450181 has completed (purged errors)
[2025-10-11 22:14:27] 2025-10-11 20:03:39,187 | INFO     | overall cleanup function is called
[2025-10-11 22:14:27] 2025-10-11 20:03:40,196 | INFO     | --- collectZombieJob: --- 10, [2392923]
[2025-10-11 22:14:27] 2025-10-11 20:03:40,196 | INFO     | zombie collector waiting for pid 2392923
[2025-10-11 22:14:27] 2025-10-11 20:03:40,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:14:27] 2025-10-11 20:03:40,196 | INFO     | collected zombie processes
[2025-10-11 22:14:27] 2025-10-11 20:03:40,197 | INFO     | will attempt to kill all subprocesses of pid=2392923
[2025-10-11 22:14:27] 2025-10-11 20:03:41,009 | INFO     | process IDs to be killed: [2392923] (in reverse order)
[2025-10-11 22:14:27] 2025-10-11 20:03:41,279 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:14:27] 2025-10-11 20:03:41,279 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:14:27] 2025-10-11 20:03:41,311 | INFO     | did not find any defunct processes belonging to 2392923
[2025-10-11 22:14:27] 2025-10-11 20:03:41,340 | INFO     | did not find any defunct processes belonging to 2392923
[2025-10-11 22:14:27] 2025-10-11 20:03:41,341 | INFO     | ready for new job
[2025-10-11 22:14:27] 2025-10-11 20:03:41,341 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:14:27] 2025-10-11 20:03:41,343 | INFO     | ***************************************
[2025-10-11 22:14:27] 2025-10-11 20:03:41,343 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 22:14:27] 2025-10-11 20:03:41,343 | INFO     | ***************************************
[2025-10-11 22:14:27] 2025-10-11 20:03:41,343 | INFO     | 
[2025-10-11 22:14:27] 2025-10-11 20:03:41,351 | INFO     | architecture information:
[2025-10-11 22:14:27] 2025-10-11 20:03:41,352 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:14:27] 2025-10-11 20:03:41,375 | INFO     | cat /etc/os-release:
[2025-10-11 22:14:27] NAME="CentOS Linux"
[2025-10-11 22:14:27] VERSION="7 (Core)"
[2025-10-11 22:14:27] ID="centos"
[2025-10-11 22:14:27] ID_LIKE="rhel fedora"
[2025-10-11 22:14:27] VERSION_ID="7"
[2025-10-11 22:14:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:14:27] ANSI_COLOR="0;31"
[2025-10-11 22:14:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:14:27] HOME_URL="https://www.centos.org/"
[2025-10-11 22:14:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:14:27] 
[2025-10-11 22:14:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:14:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:14:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:14:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:14:27] 
[2025-10-11 22:14:27] 2025-10-11 20:03:41,375 | INFO     | ***************************************
[2025-10-11 22:14:27] 2025-10-11 20:03:41,878 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2025-10-11 22:14:27] 2025-10-11 20:03:41,901 | INFO     | sufficient remaining disk space (3333798494208 B)
[2025-10-11 22:14:27] 2025-10-11 20:03:41,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:14:27] 2025-10-11 20:03:41,901 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:14:27] 2025-10-11 20:03:41,902 | INFO     | update_server=False
[2025-10-11 22:14:27] 2025-10-11 20:03:41,902 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:14:27] 2025-10-11 20:03:41,902 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:14:27] 2025-10-11 20:03:42,012 | INFO     | all job control threads have been joined
[2025-10-11 22:14:27] 2025-10-11 20:03:42,013 | INFO     | all payload control threads have been joined
[2025-10-11 22:14:27] 2025-10-11 20:03:42,213 | INFO     | all data control threads have been joined
[2025-10-11 22:14:27] 2025-10-11 20:03:42,312 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 22:14:27] 2025-10-11 20:03:42,312 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 22:14:27] 2025-10-11 20:03:42,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:14:27] 2025-10-11 20:03:42,313 | INFO     | will abort loop
[2025-10-11 22:14:27] 2025-10-11 20:03:42,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:14:27] 2025-10-11 20:03:42,907 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:14:27] 2025-10-11 20:03:43,017 | INFO     | [job] control thread has finished
[2025-10-11 22:14:27] 2025-10-11 20:03:43,018 | INFO     | [payload] control thread has finished
[2025-10-11 22:14:27] 2025-10-11 20:03:43,029 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:14:27] 2025-10-11 20:03:43,127 | INFO     | [job] validate thread has finished
[2025-10-11 22:14:27] 2025-10-11 20:03:43,218 | INFO     | [data] control thread has finished
[2025-10-11 22:14:27] 2025-10-11 20:03:43,238 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:14:27] 2025-10-11 20:03:43,317 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:14:27] 2025-10-11 20:03:43,502 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:14:27] 2025-10-11 20:03:43,630 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:14:27] 2025-10-11 20:03:43,672 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:14:27] 2025-10-11 20:03:43,907 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:14:27] 2025-10-11 20:03:44,105 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:14:27] 2025-10-11 20:03:44,256 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:14:27] 2025-10-11 20:03:44,347 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:14:27] 2025-10-11 20:03:45,110 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:14:27] 2025-10-11 20:03:46,619 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:14:27] 2025-10-11 20:04:11,307 | INFO     | PID=2385577 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 22:14:27] 2025-10-11 20:04:11,307 | INFO     | .. there are 12 such processes running
[2025-10-11 22:14:27] 2025-10-11 20:04:11,307 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:14:27] 2025-10-11 20:04:11,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:14:27] 2025-10-11 20:04:11,307 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:14:27] 2025-10-11 20:04:11,561 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:14:27] 2025-10-11 20:04:11,984 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22441035069248)>', '<ExcThread(monitor, started 22440465921792)>']
[2025-10-11 22:14:27] 2025-10-11 20:04:12,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:14:27] 2025-10-11 20:04:12,312 | INFO     | [monitor] control thread has ended
[2025-10-11 22:14:27] 2025-10-11 20:04:17,010 | INFO     | all workflow threads have been joined
[2025-10-11 22:14:27] 2025-10-11 20:04:17,010 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:14:27] 2025-10-11 20:04:17,010 | INFO     | traces error code: 0
[2025-10-11 22:14:27] 2025-10-11 20:04:17,010 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:14:27] 2025-10-11 20:04:17,151 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:14:27] 2025-10-11 20:04:17,155 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:14:27] 2025-10-11 20:04:17,159 [wrapper] pilotpid: 2385577
[2025-10-11 22:14:27] 2025-10-11 20:04:17,163 [wrapper] Pilot exit status: 0
[2025-10-11 22:14:27] 2025-10-11 20:04:17,178 [wrapper] pandaids: 6837450181 6837450181
[2025-10-11 22:14:27] 2025-10-11 20:04:17,356 [wrapper] cleanup supervisor_pilot 2852389 2385578
[2025-10-11 22:14:27] 2025-10-11 20:04:17,361 [wrapper] Test setup, not cleaning
[2025-10-11 22:14:27] 2025-10-11 20:04:17,365 [wrapper] apfmon messages muted
[2025-10-11 22:14:27] 2025-10-11 20:04:17,369 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:14:27] 2025-10-11 20:04:17,372 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:14:27]  *** Error codes and diagnostics ***
[2025-10-11 22:14:27]     "exeErrorCode": 0,
[2025-10-11 22:14:27]     "exeErrorDiag": "",
[2025-10-11 22:14:27]     "pilotErrorCode": 0,
[2025-10-11 22:14:27]     "pilotErrorDiag": "",
[2025-10-11 22:14:27]  *** Listing of results directory ***
[2025-10-11 22:14:27] total 625812
[2025-10-11 22:14:27] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-11 22:14:27] -rw-r--r-- 1 boinc boinc    557409 Oct 10 07:14 pilot3.tar.gz
[2025-10-11 22:14:27] -rwx------ 1 boinc boinc     36292 Oct 10 07:37 runpilot2-wrapper.sh
[2025-10-11 22:14:27] -rw-r--r-- 1 boinc boinc      5112 Oct 10 07:37 queuedata.json
[2025-10-11 22:14:27] -rw-r--r-- 1 boinc boinc       100 Oct 11 18:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:14:27] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 18:10 run_atlas
[2025-10-11 22:14:27] -rw-r--r-- 1 boinc boinc       105 Oct 11 18:10 job.xml
[2025-10-11 22:14:27] -rw-r--r-- 3 boinc boinc 220327254 Oct 11 18:10 EVNT.46676267._001351.pool.root.1
[2025-10-11 22:14:27] -rw-r--r-- 3 boinc boinc 220327254 Oct 11 18:10 ATLAS.root_0
[2025-10-11 22:14:27] drwxrwx--x 2 boinc boinc      4096 Oct 11 18:10 shared
[2025-10-11 22:14:27] -rw-r--r-- 2 boinc boinc    569677 Oct 11 18:10 input.tar.gz
[2025-10-11 22:14:27] -rw-r--r-- 2 boinc boinc     15120 Oct 11 18:10 start_atlas.sh
[2025-10-11 22:14:27] -rw-r--r-- 1 boinc boinc         0 Oct 11 18:10 boinc_lockfile
[2025-10-11 22:14:27] -rw-r--r-- 1 boinc boinc      6690 Oct 11 19:26 init_data.xml
[2025-10-11 22:14:27] -rw-r--r-- 1 boinc boinc      2550 Oct 11 19:26 pandaJob.out
[2025-10-11 22:14:27] -rw------- 1 boinc boinc    975520 Oct 11 19:26 agis_schedconf.cvmfs.json
[2025-10-11 22:14:27] -rw------- 1 boinc boinc 192963404 Oct 11 22:02 HITS.46676269._033187.pool.root.1
[2025-10-11 22:14:27] -rw-r--r-- 1 boinc boinc       528 Oct 11 22:03 boinc_task_state.xml
[2025-10-11 22:14:27] -rw------- 1 boinc boinc      1024 Oct 11 22:03 memory_monitor_summary.json
[2025-10-11 22:14:27] -rw------- 1 boinc boinc        97 Oct 11 22:03 pilot_heartbeat.json
[2025-10-11 22:14:27] -rw------- 1 boinc boinc   1560580 Oct 11 22:03 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:14:27] -rw------- 1 boinc boinc    332464 Oct 11 22:03 log.46676269._033187.job.log.tgz.1
[2025-10-11 22:14:27] -rw------- 1 boinc boinc      7797 Oct 11 22:03 heartbeat.json
[2025-10-11 22:14:27] -rw------- 1 boinc boinc      5022 Oct 11 22:04 pilotlog.txt
[2025-10-11 22:14:27] -rw------- 1 boinc boinc   1318674 Oct 11 22:04 log.46676269._033187.job.log.1
[2025-10-11 22:14:27] -rw------- 1 boinc boinc       357 Oct 11 22:04 output.list
[2025-10-11 22:14:27] -rw-r--r-- 1 boinc boinc       620 Oct 11 22:04 runtime_log
[2025-10-11 22:14:27] -rw------- 1 boinc boinc   1669120 Oct 11 22:04 result.tar.gz
[2025-10-11 22:14:27] -rw-r--r-- 1 boinc boinc      9146 Oct 11 22:04 runtime_log.err
[2025-10-11 22:14:27] -rw------- 1 boinc boinc       787 Oct 11 22:04 1MWKDmK0KR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeUcNDmN6wZym.diag
[2025-10-11 22:14:27] -rw-r--r-- 1 boinc boinc        26 Oct 11 22:14 wrapper_checkpoint.txt
[2025-10-11 22:14:27] -rw-r--r-- 1 boinc boinc      8192 Oct 11 22:14 boinc_mmap_file
[2025-10-11 22:14:27] -rw-r--r-- 1 boinc boinc     22606 Oct 11 22:14 stderr.txt
[2025-10-11 22:14:27] HITS file was successfully produced:
[2025-10-11 22:14:27] -rw------- 1 boinc boinc 192963404 Oct 11 22:02 shared/HITS.pool.root.1
[2025-10-11 22:14:27]  *** Contents of shared directory: ***
[2025-10-11 22:14:27] total 405824
[2025-10-11 22:14:27] -rw-r--r-- 3 boinc boinc 220327254 Oct 11 18:10 ATLAS.root_0
[2025-10-11 22:14:27] -rw-r--r-- 2 boinc boinc    569677 Oct 11 18:10 input.tar.gz
[2025-10-11 22:14:27] -rw-r--r-- 2 boinc boinc     15120 Oct 11 18:10 start_atlas.sh
[2025-10-11 22:14:27] -rw------- 1 boinc boinc 192963404 Oct 11 22:02 HITS.pool.root.1
[2025-10-11 22:14:27] -rw------- 1 boinc boinc   1669120 Oct 11 22:04 result.tar.gz
22:14:28 (2381574): run_atlas exited; CPU time 36748.054837
22:14:28 (2381574): called boinc_finish(0)

</stderr_txt>
]]>

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